Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746960 | XP_013469320.1 | 97.948 | 536 | 11 | 0 | 1 | 536 | 1 | 536 | 0.0 | 1088 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746960 | sp|Q9P4X3|UTP7_SCHPO | 38.580 | 521 | 301 | 8 | 23 | 533 | 9 | 520 | 3.87e-119 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746960 | A0A072VPQ9 | 97.948 | 536 | 11 | 0 | 1 | 536 | 1 | 536 | 0.0 | 1088 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0746960 | Msa1123770 | 0.817945 | 2.533500e-52 | -8.615850e-47 |
| Msa0746960 | Msa1169910 | 0.807083 | 6.011403e-50 | -8.615850e-47 |
| Msa0746960 | Msa1385720 | 0.812201 | 4.775694e-51 | -8.615850e-47 |
| Msa0746960 | Msa1434090 | 0.803206 | 3.893653e-49 | -8.615850e-47 |
| Msa0129340 | Msa0746960 | 0.991992 | 1.088633e-190 | -8.615850e-47 |
| Msa0172930 | Msa0746960 | 0.806940 | 6.443000e-50 | -8.615850e-47 |
| Msa0230520 | Msa0746960 | 0.814232 | 1.710673e-51 | -8.615850e-47 |
| Msa0437020 | Msa0746960 | 0.827852 | 1.244080e-54 | -8.615850e-47 |
| Msa0306690 | Msa0746960 | 0.802869 | 4.572426e-49 | -8.615850e-47 |
| Msa0586420 | Msa0746960 | 0.837586 | 4.764218e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746960 | MtrunA17_Chr1g0197651 | 97.948 | 536 | 11 | 0 | 1 | 536 | 1 | 536 | 0.0 | 1088 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746960 | AT3G10530.1 | 67.103 | 535 | 166 | 5 | 4 | 532 | 5 | 535 | 0.0 | 723 |
Find 165 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGCTTCTACCAACAAATT+TGG | 0.135356 | 5_1:-70588446 | Msa0746960:CDS |
| AGTGTTGAGGCTTCAGTTTC+TGG | 0.160612 | 5_1:-70588483 | Msa0746960:CDS |
| GTGCAGCTGCAATCTCTTTC+TGG | 0.181319 | 5_1:+70594076 | None:intergenic |
| CAGGTTCTGAGGGATGTTTC+TGG | 0.181331 | 5_1:-70588053 | Msa0746960:CDS |
| CCATCATCATAACTAAATTT+TGG | 0.187157 | 5_1:-70587477 | Msa0746960:exon |
| TGAAGAAGAAAGGGTTTATT+TGG | 0.202123 | 5_1:+70594141 | None:intergenic |
| ATTTGGGATGCTTCTTTATC+AGG | 0.215020 | 5_1:-70588429 | Msa0746960:CDS |
| ACAAACCGCTGTAAAGATTT+TGG | 0.230964 | 5_1:+70587510 | None:intergenic |
| GGGAAATTTCGAACTGGTTT+AGG | 0.234558 | 5_1:-70588383 | Msa0746960:CDS |
| TCAGTGGAAGGCTTGTTATT+TGG | 0.239131 | 5_1:+70594014 | None:intergenic |
| TCACTCAAATGGCCACTTAA+TGG | 0.240805 | 5_1:-70588213 | Msa0746960:CDS |
| CTCTGTTTAGGTGTTTCAAA+TGG | 0.246022 | 5_1:+70587858 | None:intergenic |
| CGACCATACGAAGACGTTCT+AGG | 0.250652 | 5_1:-70587960 | Msa0746960:CDS |
| CTGGTAAACGTAGGTAATTT+TGG | 0.260220 | 5_1:+70594207 | None:intergenic |
| TACTTCAAGTGGCCGGTATA+TGG | 0.286386 | 5_1:-70590152 | Msa0746960:CDS |
| ACTTTGGAGTTTAGTCAAAA+AGG | 0.286444 | 5_1:-70588107 | Msa0746960:CDS |
| AGGTAAGGCAGATCAAATTT+TGG | 0.294529 | 5_1:-70587331 | Msa0746960:three_prime_UTR |
| TAAGGGCCACCTAGCAATTA+TGG | 0.314562 | 5_1:-70590116 | Msa0746960:CDS |
| GAGCCTGATCAGGGAGCTTC+AGG | 0.314653 | 5_1:-70590080 | Msa0746960:intron |
| GTTCTCCTGCTCCTGGAATA+AGG | 0.316425 | 5_1:+70587907 | None:intergenic |
| AGGAGAAGCTGCTAATTTAA+AGG | 0.324134 | 5_1:-70593712 | Msa0746960:intron |
| ATTGCTAGAGAGAAATTATA+TGG | 0.329371 | 5_1:-70593553 | Msa0746960:CDS |
| TGGCTTCTACCAACAAATTT+GGG | 0.332802 | 5_1:-70588445 | Msa0746960:CDS |
| GAAGGAGAAATTACTTTCTC+TGG | 0.335867 | 5_1:+70589613 | None:intergenic |
| CATGACTCATTCAATGGTTA+AGG | 0.339749 | 5_1:-70588009 | Msa0746960:CDS |
| TTGTCTAGTATCCTTATTCC+AGG | 0.340451 | 5_1:-70587918 | Msa0746960:CDS |
| TGGTAGAAGCCAGAAGAAAA+TGG | 0.349479 | 5_1:+70588456 | None:intergenic |
| GGTATCCATACATATATAAT+CGG | 0.354871 | 5_1:-70589030 | Msa0746960:CDS |
| TACAACGGGGTTGTTTCTTT+AGG | 0.372666 | 5_1:-70588332 | Msa0746960:CDS |
| CACAGAGCTTCATTGCCTTA+AGG | 0.379605 | 5_1:-70589002 | Msa0746960:intron |
| TGGAATTAAACCCTTACAAC+GGG | 0.383580 | 5_1:-70588346 | Msa0746960:CDS |
| CAATGCAAAGAGGCCTTACT+TGG | 0.392464 | 5_1:-70587601 | Msa0746960:CDS |
| AAAGAAACAACCCCGTTGTA+AGG | 0.402029 | 5_1:+70588335 | None:intergenic |
| CCAAAATTTAGTTATGATGA+TGG | 0.408449 | 5_1:+70587477 | None:intergenic |
| TGATGAATCTGAGCCTGATC+AGG | 0.411334 | 5_1:-70590090 | Msa0746960:CDS |
| GAGAACCCAACTTTGATTCA+TGG | 0.414011 | 5_1:-70587890 | Msa0746960:CDS |
| ATCTGCTAAAGCTGCTGCTC+AGG | 0.414409 | 5_1:-70593527 | Msa0746960:CDS |
| AAGAAGCATCCCAAATTTGT+TGG | 0.420273 | 5_1:+70588436 | None:intergenic |
| TCTCACCGTACCGATCTTGC+TGG | 0.422324 | 5_1:+70587773 | None:intergenic |
| TCCAAAGTATTTGCATGGCT+TGG | 0.425047 | 5_1:+70588122 | None:intergenic |
| GAAGTAAAGTCTATTGTATA+CGG | 0.427102 | 5_1:+70590169 | None:intergenic |
| TCTGTTTAGGTGTTTCAAAT+GGG | 0.437717 | 5_1:+70587859 | None:intergenic |
| TAACAAGCCTTCCACTGAAC+AGG | 0.438951 | 5_1:-70594009 | Msa0746960:intron |
| GTTACAATGGGTACAATAGC+TGG | 0.439170 | 5_1:-70588404 | Msa0746960:CDS |
| TGCAACCCATGAATCAAAGT+TGG | 0.442723 | 5_1:+70587884 | None:intergenic |
| CAATATGATATTACTTTACC+AGG | 0.444529 | 5_1:-70592497 | Msa0746960:intron |
| GTACCTGAAGCTCCCTGATC+AGG | 0.447625 | 5_1:+70590077 | None:intergenic |
| TCTAGGCATAGGACATTCAA+TGG | 0.452742 | 5_1:-70587943 | Msa0746960:CDS |
| GCAACCCATGAATCAAAGTT+GGG | 0.456061 | 5_1:+70587885 | None:intergenic |
| GCTCTGGCATTTCACTCAAA+TGG | 0.456207 | 5_1:-70588224 | Msa0746960:CDS |
| CAGAAACATCCCTCAGAACC+TGG | 0.456648 | 5_1:+70588054 | None:intergenic |
| GTGGAAGGCTTGTTATTTGG+AGG | 0.457414 | 5_1:+70594017 | None:intergenic |
| ACCAAGCCATGCAAATACTT+TGG | 0.458833 | 5_1:-70588123 | Msa0746960:CDS |
| TCTGTGTTGTGTTGTGTGAC+TGG | 0.461489 | 5_1:+70594188 | None:intergenic |
| CCGTCCCGATTATATATGTA+TGG | 0.461991 | 5_1:+70589025 | None:intergenic |
| TATGGCTATTGGTGGTCGTA+AGG | 0.463097 | 5_1:-70590134 | Msa0746960:CDS |
| GGATCCAGCATGATTGTCTC+AGG | 0.464997 | 5_1:+70587795 | None:intergenic |
| TCATTTATGGTTAAAGGTGT+AGG | 0.469000 | 5_1:+70587273 | None:intergenic |
| GGCTTGCTTGCGTGTGGTAA+TGG | 0.469336 | 5_1:-70588086 | Msa0746960:CDS |
| CTTTATCAGGATGTTACAAT+GGG | 0.469440 | 5_1:-70588416 | Msa0746960:CDS |
| CTTGACAAGGGGAGACGAAC+TGG | 0.470362 | 5_1:+70588274 | None:intergenic |
| TTGGGACTTGAGGAAATTTG+AGG | 0.474292 | 5_1:-70588159 | Msa0746960:CDS |
| AGTGGCCGGTATATGGCTAT+TGG | 0.477411 | 5_1:-70590145 | Msa0746960:CDS |
| CTGGTGCACAGAACTATTCA+AGG | 0.480463 | 5_1:-70588034 | Msa0746960:CDS |
| GCTAACTGCACAAGAGATAG+AGG | 0.481995 | 5_1:-70587733 | Msa0746960:CDS |
| ACAATAGACTTTACTTCAAG+TGG | 0.483812 | 5_1:-70590163 | Msa0746960:CDS |
| AGAACCCAACTTTGATTCAT+GGG | 0.484488 | 5_1:-70587889 | Msa0746960:CDS |
| AAGGCATAGAAAAGACGTAT+AGG | 0.486312 | 5_1:-70592571 | Msa0746960:CDS |
| AAGGTACATGACTCATTCAA+TGG | 0.486947 | 5_1:-70588015 | Msa0746960:CDS |
| CAAGTAAGGCCTCTTTGCAT+TGG | 0.491994 | 5_1:+70587602 | None:intergenic |
| ACCTAAACAGAGAAGAGAAA+AGG | 0.494344 | 5_1:-70587847 | Msa0746960:CDS |
| AAATTAAGCTTTGGGACTTG+AGG | 0.496393 | 5_1:-70588169 | Msa0746960:CDS |
| AGGAGCATGGTTCAGTGTTG+AGG | 0.496647 | 5_1:-70588496 | Msa0746960:CDS |
| AAGTTGGGTTCTCCTGCTCC+TGG | 0.498038 | 5_1:+70587900 | None:intergenic |
| TTATTATTGCCTTTCAGGTA+AGG | 0.498810 | 5_1:-70587346 | Msa0746960:three_prime_UTR |
| GGCCACTTAATGGCTACTGC+CGG | 0.499782 | 5_1:-70588203 | Msa0746960:CDS |
| ATAGCTGGGAAATTTCGAAC+TGG | 0.501469 | 5_1:-70588389 | Msa0746960:CDS |
| GCCACTTAATGGCTACTGCC+GGG | 0.504950 | 5_1:-70588202 | Msa0746960:CDS |
| TTGCTGATGAACTAGAACTT+AGG | 0.505406 | 5_1:-70593752 | Msa0746960:CDS |
| TGGTAATGGTTCATATATCC+AGG | 0.507565 | 5_1:-70588072 | Msa0746960:CDS |
| TTTGATCTGCCTTACCTGAA+AGG | 0.508416 | 5_1:+70587337 | None:intergenic |
| AGCTGCTGCTCAGGCTGAGA+AGG | 0.509056 | 5_1:-70593518 | Msa0746960:intron |
| AGCTGCTGTGGAAGCTGTCA+AGG | 0.516829 | 5_1:-70587700 | Msa0746960:CDS |
| GTCAAGATGCTATGTCATCA+AGG | 0.517188 | 5_1:-70588257 | Msa0746960:CDS |
| ACAAAAGGAAGAAGCAAGGC+TGG | 0.517202 | 5_1:-70587657 | Msa0746960:CDS |
| TCTTTATCAGGATGTTACAA+TGG | 0.517499 | 5_1:-70588417 | Msa0746960:CDS |
| CTGGTAAAGTAATATCATAT+TGG | 0.522994 | 5_1:+70592498 | None:intergenic |
| AAAGAAACAGAAAACTAATG+AGG | 0.523271 | 5_1:-70587544 | Msa0746960:CDS |
| AGTGCGGCGGTGAAGAAGAA+AGG | 0.524077 | 5_1:+70594131 | None:intergenic |
| GAAAGAGATTGCAGCTGCAC+CGG | 0.524620 | 5_1:-70594073 | Msa0746960:five_prime_UTR |
| AGTATCCTTATTCCAGGAGC+AGG | 0.524714 | 5_1:-70587912 | Msa0746960:CDS |
| AAGGAGAAATTACTTTCTCT+GGG | 0.524964 | 5_1:+70589614 | None:intergenic |
| TCAAGGGCCAGTCTCAGCTC+TGG | 0.526804 | 5_1:-70588240 | Msa0746960:CDS |
| GTCACACAACACAACACAGA+CGG | 0.528015 | 5_1:-70594185 | Msa0746960:five_prime_UTR |
| GGCTGAGATGGAAGCTGCTG+TGG | 0.531233 | 5_1:-70587712 | Msa0746960:CDS |
| ATTCATACCTGTTCAGTGGA+AGG | 0.532716 | 5_1:+70594002 | None:intergenic |
| GAGTTTCTTCCATCTTGCAC+CGG | 0.539209 | 5_1:+70594054 | None:intergenic |
| ACGACGGTGCACAGAGAGAG+AGG | 0.539312 | 5_1:+70594105 | None:intergenic |
| ATGACTCATTCAATGGTTAA+GGG | 0.540953 | 5_1:-70588008 | Msa0746960:CDS |
| TCCACCTGAGACAATCATGC+TGG | 0.543781 | 5_1:-70587799 | Msa0746960:CDS |
| CTAGGCATAGGACATTCAAT+GGG | 0.546036 | 5_1:-70587942 | Msa0746960:CDS |
| CAGCTGCAATCTCTTTCTGG+TGG | 0.546179 | 5_1:+70594079 | None:intergenic |
| AAGAAACAGAAAACTAATGA+GGG | 0.546267 | 5_1:-70587543 | Msa0746960:CDS |
| TAAACTCCAAAGTATTTGCA+TGG | 0.554250 | 5_1:+70588117 | None:intergenic |
| TTCATATATCCAGGTTCTGA+GGG | 0.557477 | 5_1:-70588063 | Msa0746960:CDS |
| TGAAATGCCAGAGCTGAGAC+TGG | 0.559422 | 5_1:+70588233 | None:intergenic |
| GTTCATATATCCAGGTTCTG+AGG | 0.561682 | 5_1:-70588064 | Msa0746960:CDS |
| GAAAACAAAAGGAAGAAGCA+AGG | 0.562476 | 5_1:-70587661 | Msa0746960:CDS |
| AAGAAACAACCCCGTTGTAA+GGG | 0.563141 | 5_1:+70588336 | None:intergenic |
| ATGGTTAAGGGATACCAGAT+AGG | 0.564220 | 5_1:-70587996 | Msa0746960:CDS |
| ACAAGAGATAGAGGCTGAGA+TGG | 0.568034 | 5_1:-70587724 | Msa0746960:CDS |
| CCCCGGCAGTAGCCATTAAG+TGG | 0.570074 | 5_1:+70588201 | None:intergenic |
| GGCCGGTATATGGCTATTGG+TGG | 0.570218 | 5_1:-70590142 | Msa0746960:CDS |
| GTATCCATACATATATAATC+GGG | 0.570684 | 5_1:-70589029 | Msa0746960:CDS |
| TTACAATGGGTACAATAGCT+GGG | 0.572680 | 5_1:-70588403 | Msa0746960:CDS |
| TGGATTATGCCTAGCGAAGG+AGG | 0.572860 | 5_1:-70592608 | Msa0746960:CDS |
| ATGCCTAGAACGTCTTCGTA+TGG | 0.573287 | 5_1:+70587957 | None:intergenic |
| GACCACCAATAGCCATATAC+CGG | 0.573429 | 5_1:+70590140 | None:intergenic |
| TCATCATGTCCATAATTGCT+AGG | 0.576850 | 5_1:+70590107 | None:intergenic |
| TCTATATAACCTCCTTCGCT+AGG | 0.576884 | 5_1:+70592599 | None:intergenic |
| GCAGCTGCACCGGTGCAAGA+TGG | 0.578260 | 5_1:-70594063 | Msa0746960:exon |
| CTCACCGTACCGATCTTGCT+GGG | 0.578578 | 5_1:+70587774 | None:intergenic |
| GTTTCTTTAGGCCACTCAGC+CGG | 0.578772 | 5_1:-70588320 | Msa0746960:CDS |
| ATGGCTATTGGTGGTCGTAA+GGG | 0.579219 | 5_1:-70590133 | Msa0746960:CDS |
| ATGCTGGATCCCAGCAAGAT+CGG | 0.579275 | 5_1:-70587783 | Msa0746960:CDS |
| GCTTGAGATATCTACTTCAC+CGG | 0.581565 | 5_1:+70592529 | None:intergenic |
| AAAGACGTATAGGATTAAGC+AGG | 0.582780 | 5_1:-70592561 | Msa0746960:CDS |
| ACAAGGGGAGACGAACTGGT+TGG | 0.583473 | 5_1:+70588278 | None:intergenic |
| TAGACTTTACTTCAAGTGGC+CGG | 0.590973 | 5_1:-70590159 | Msa0746960:CDS |
| TCCAGCATGATTGTCTCAGG+TGG | 0.597209 | 5_1:+70587798 | None:intergenic |
| GTGCGGCGGTGAAGAAGAAA+GGG | 0.597856 | 5_1:+70594132 | None:intergenic |
| AAATCGATTTCTAAGGCCAA+AGG | 0.603087 | 5_1:+70587369 | None:intergenic |
| AAGTAGATATCTCAAGCTCA+AGG | 0.603892 | 5_1:-70592523 | Msa0746960:CDS |
| TTTAGGACGCACAAATGTGA+TGG | 0.605701 | 5_1:-70588366 | Msa0746960:CDS |
| TAGCGAAGGAGGTTATATAG+AGG | 0.605779 | 5_1:-70592597 | Msa0746960:CDS |
| GATGAATCTGAGCCTGATCA+GGG | 0.606259 | 5_1:-70590089 | Msa0746960:CDS |
| CTTCCACATAGTAACTGTAC+CGG | 0.607488 | 5_1:+70588301 | None:intergenic |
| TCAAGATGCTATGTCATCAA+GGG | 0.609077 | 5_1:-70588256 | Msa0746960:CDS |
| ACACAACACAACACAGACGG+AGG | 0.610885 | 5_1:-70594182 | Msa0746960:five_prime_UTR |
| ATGACATAGCATCTTGACAA+GGG | 0.617617 | 5_1:+70588262 | None:intergenic |
| CCACTTAATGGCTACTGCCG+GGG | 0.620121 | 5_1:-70588201 | Msa0746960:CDS |
| AAATATTCATACCTGTTCAG+TGG | 0.624277 | 5_1:+70593998 | None:intergenic |
| CTCTTTCTGGTGGAAGACGA+CGG | 0.624605 | 5_1:+70594089 | None:intergenic |
| ATGCAATTGCCAATGCAAAG+AGG | 0.626680 | 5_1:-70587611 | Msa0746960:CDS |
| CGACGGTGCACAGAGAGAGA+GGG | 0.626802 | 5_1:+70594106 | None:intergenic |
| CAGTGGATTATGCCTAGCGA+AGG | 0.626814 | 5_1:-70592611 | Msa0746960:CDS |
| GGATCCCAGCAAGATCGGTA+CGG | 0.626856 | 5_1:-70587778 | Msa0746960:CDS |
| ATTAAGCAGGAGACAATAGC+CGG | 0.629818 | 5_1:-70592548 | Msa0746960:CDS |
| TACGAAGACGTTCTAGGCAT+AGG | 0.632328 | 5_1:-70587954 | Msa0746960:CDS |
| ACAGAGAGAGAGGGAAAGTG+CGG | 0.633821 | 5_1:+70594115 | None:intergenic |
| AACTGCCAAAATCTTTACAG+CGG | 0.639793 | 5_1:-70587515 | Msa0746960:CDS |
| GAGAGAGAGGGAAAGTGCGG+CGG | 0.641152 | 5_1:+70594118 | None:intergenic |
| GGAGGTTATATAGAGGCTGA+AGG | 0.643831 | 5_1:-70592590 | Msa0746960:CDS |
| GCTGCTGTGGAAGCTGTCAA+GGG | 0.644582 | 5_1:-70587699 | Msa0746960:CDS |
| CAGCCGGTACAGTTACTATG+TGG | 0.648457 | 5_1:-70588304 | Msa0746960:CDS |
| ATGGAATTAAACCCTTACAA+CGG | 0.650725 | 5_1:-70588347 | Msa0746960:CDS |
| AAGAGAAACTGTGCGTGATG+TGG | 0.656485 | 5_1:-70589670 | Msa0746960:CDS |
| TAGTAACTGTACCGGCTGAG+TGG | 0.670354 | 5_1:+70588309 | None:intergenic |
| CCATACATATATAATCGGGA+CGG | 0.677850 | 5_1:-70589025 | Msa0746960:CDS |
| AGGTCAAAGAAGTATCTCAG+AGG | 0.688390 | 5_1:-70593732 | Msa0746960:CDS |
| TGACATAGCATCTTGACAAG+GGG | 0.690641 | 5_1:+70588263 | None:intergenic |
| TCATGTCCATAATTGCTAGG+TGG | 0.709708 | 5_1:+70590110 | None:intergenic |
| GATGACATAGCATCTTGACA+AGG | 0.739903 | 5_1:+70588261 | None:intergenic |
| GGAATTAAACCCTTACAACG+GGG | 0.772754 | 5_1:-70588345 | Msa0746960:CDS |
| GTTGTGTGACTGGTAAACGT+AGG | 0.816560 | 5_1:+70594198 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATCAAATTTATATAATTTA+AGG | - | chr5_1:70588251-70588270 | Msa0746960:CDS | 10.0% |
| !! | TAAAGAAAAAAATAATACTT+TGG | - | chr5_1:70589495-70589514 | Msa0746960:intron | 10.0% |
| !! | TATATATCAACAAAAATAAA+TGG | + | chr5_1:70589759-70589778 | None:intergenic | 10.0% |
| !!! | ATGAAATTTAAGTTGAAAAT+TGG | - | chr5_1:70588199-70588218 | Msa0746960:CDS | 15.0% |
| !! | TGTATATAGTATTAATTGAA+GGG | - | chr5_1:70589524-70589543 | Msa0746960:intron | 15.0% |
| !!! | TTTATAAAAGCATTAAAACT+AGG | + | chr5_1:70591067-70591086 | None:intergenic | 15.0% |
| !!! | TATTCTTGGATTTTAATATT+TGG | - | chr5_1:70591743-70591762 | Msa0746960:intron | 15.0% |
| !!! | ATTTTAATATTTGGTTTTTC+AGG | - | chr5_1:70591752-70591771 | Msa0746960:intron | 15.0% |
| !! | CAAAAACATTTATAGATAAA+TGG | + | chr5_1:70591875-70591894 | None:intergenic | 15.0% |
| !!! | ACATATATAATATTTTACTG+GGG | + | chr5_1:70592343-70592362 | None:intergenic | 15.0% |
| !!! | CACATATATAATATTTTACT+GGG | + | chr5_1:70592344-70592363 | None:intergenic | 15.0% |
| !! | CAGTAAAATATTATATATGT+GGG | - | chr5_1:70592343-70592362 | Msa0746960:intron | 15.0% |
| !! | AGTAAAATATTATATATGTG+GGG | - | chr5_1:70592344-70592363 | Msa0746960:intron | 15.0% |
| !! | TATCCTAAAACTAAATATAT+TGG | - | chr5_1:70592883-70592902 | Msa0746960:intron | 15.0% |
| !!! | ATAATAAAAATCGATTTCTA+AGG | + | chr5_1:70594087-70594106 | None:intergenic | 15.0% |
| !!! | AATTTTTCATTTATGGTTAA+AGG | + | chr5_1:70594182-70594201 | None:intergenic | 15.0% |
| !!! | ATTTGTGAAATTTGATTTGT+AGG | - | chr5_1:70587838-70587857 | Msa0746960:CDS | 20.0% |
| !!! | TTTGTGAAATTTGATTTGTA+GGG | - | chr5_1:70587839-70587858 | Msa0746960:CDS | 20.0% |
| !! | TTTGTGTAAAATAATTGATG+TGG | - | chr5_1:70588083-70588102 | Msa0746960:CDS | 20.0% |
| !!! | TAATTGCATATTTCATTTTG+TGG | - | chr5_1:70588112-70588131 | Msa0746960:CDS | 20.0% |
| !!! | CAATTTAGAATATGTAGTTA+CGG | + | chr5_1:70588606-70588625 | None:intergenic | 20.0% |
| !!! | TAGTTACATGTTTTATGTAT+TGG | - | chr5_1:70588793-70588812 | Msa0746960:intron | 20.0% |
| !! | ACTTAATTAATCTACTTAAC+TGG | - | chr5_1:70589324-70589343 | Msa0746960:intron | 20.0% |
| !! | CTTAATTAATCTACTTAACT+GGG | - | chr5_1:70589325-70589344 | Msa0746960:intron | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | + | chr5_1:70589461-70589480 | None:intergenic | 20.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | - | chr5_1:70589460-70589479 | Msa0746960:intron | 20.0% |
| !! | GTGTATATAGTATTAATTGA+AGG | - | chr5_1:70589523-70589542 | Msa0746960:intron | 20.0% |
| !!! | AATAAATGGATTGGATTTAT+GGG | + | chr5_1:70589745-70589764 | None:intergenic | 20.0% |
| !!! | AAATAAATGGATTGGATTTA+TGG | + | chr5_1:70589746-70589765 | None:intergenic | 20.0% |
| !! | ATCAACAAAAATAAATGGAT+TGG | + | chr5_1:70589754-70589773 | None:intergenic | 20.0% |
| !! | CATAATGAAAATCAATGAAA+GGG | + | chr5_1:70589873-70589892 | None:intergenic | 20.0% |
| !! | ACATAATGAAAATCAATGAA+AGG | + | chr5_1:70589874-70589893 | None:intergenic | 20.0% |
| !!! | TTTCATTGATTTTCATTATG+TGG | - | chr5_1:70589873-70589892 | Msa0746960:intron | 20.0% |
| !! | GCGTTTATTTAAATTTATGT+AGG | + | chr5_1:70590478-70590497 | None:intergenic | 20.0% |
| !! | ACATAAATTTAAATAAACGC+TGG | - | chr5_1:70590478-70590497 | Msa0746960:intron | 20.0% |
| !! | GATATTAGAAGAATGTTATA+TGG | - | chr5_1:70590726-70590745 | Msa0746960:intron | 20.0% |
| !!! | TCTTTTAAGTATTTTAAGTG+AGG | + | chr5_1:70590961-70590980 | None:intergenic | 20.0% |
| !! | TTACACTTAAAAAAATGTCT+GGG | - | chr5_1:70591979-70591998 | Msa0746960:intron | 20.0% |
| !! | AAAATGCAATTACAGAAATA+GGG | - | chr5_1:70592185-70592204 | Msa0746960:intron | 20.0% |
| !!! | CATATATAATATTTTACTGG+GGG | + | chr5_1:70592342-70592361 | None:intergenic | 20.0% |
| !!! | CCACATATATAATATTTTAC+TGG | + | chr5_1:70592345-70592364 | None:intergenic | 20.0% |
| !! | CCAGTAAAATATTATATATG+TGG | - | chr5_1:70592342-70592361 | Msa0746960:intron | 20.0% |
| !!! | CAAAATTTTCAAAATTTCAC+AGG | - | chr5_1:70592395-70592414 | Msa0746960:intron | 20.0% |
| !!! | CATCCAATATATTTAGTTTT+AGG | + | chr5_1:70592889-70592908 | None:intergenic | 20.0% |
| !! | TAGACAAAAAAATTAAGCTT+TGG | - | chr5_1:70593268-70593287 | Msa0746960:intron | 20.0% |
| !! | AGACAAAAAAATTAAGCTTT+GGG | - | chr5_1:70593269-70593288 | Msa0746960:intron | 20.0% |
| !! | AAACTGAAAAAGAAAACAAA+AGG | - | chr5_1:70593774-70593793 | Msa0746960:intron | 20.0% |
| !! | AAAAACAAAACTGAATTAAC+TGG | + | chr5_1:70593995-70594014 | None:intergenic | 20.0% |
| !!! | CGTTTTCAATTTTTCATTTA+TGG | + | chr5_1:70594189-70594208 | None:intergenic | 20.0% |
| !!! | AAGGAATAATAAGAAGCATT+CGG | + | chr5_1:70587656-70587675 | None:intergenic | 25.0% |
| ! | ATTGCTAGAGAGAAATTATA+TGG | - | chr5_1:70587893-70587912 | Msa0746960:CDS | 25.0% |
| ! | TAAGGATAATTACTCAAACA+AGG | - | chr5_1:70588269-70588288 | Msa0746960:CDS | 25.0% |
| ! | CTTGTAAAGATGTAGTATAA+GGG | + | chr5_1:70588358-70588377 | None:intergenic | 25.0% |
| ! | ACTTGTAAAGATGTAGTATA+AGG | + | chr5_1:70588359-70588378 | None:intergenic | 25.0% |
| ! | TACTACATCTTTACAAGTTA+AGG | - | chr5_1:70588361-70588380 | Msa0746960:CDS | 25.0% |
| !! | TGATTCGAGTTACTTTAAAT+CGG | - | chr5_1:70588624-70588643 | Msa0746960:intron | 25.0% |
| !!! | ATGTATTGGCTTTCTAATTT+TGG | - | chr5_1:70588807-70588826 | Msa0746960:intron | 25.0% |
| ! | CTGGTAAAGTAATATCATAT+TGG | + | chr5_1:70588951-70588970 | None:intergenic | 25.0% |
| ! | CAATATGATATTACTTTACC+AGG | - | chr5_1:70588949-70588968 | Msa0746960:intron | 25.0% |
| !! | ATGCTTGTTAATAGTATCTA+AGG | - | chr5_1:70588983-70589002 | Msa0746960:intron | 25.0% |
| !! | TGTTAATAGTATCTAAGGTT+AGG | - | chr5_1:70588988-70589007 | Msa0746960:intron | 25.0% |
| ! | TGAAACAAGATCAATAACAT+TGG | - | chr5_1:70589088-70589107 | Msa0746960:intron | 25.0% |
| ! | GAAACAAGATCAATAACATT+GGG | - | chr5_1:70589089-70589108 | Msa0746960:intron | 25.0% |
| ! | ATATTGCCTTTCAAATAATC+TGG | - | chr5_1:70589202-70589221 | Msa0746960:intron | 25.0% |
| ! | AATTGTCCAGATTATTTGAA+AGG | + | chr5_1:70589211-70589230 | None:intergenic | 25.0% |
| ! | TGAAAAACTTCACTGATATT+TGG | + | chr5_1:70589284-70589303 | None:intergenic | 25.0% |
| !! | TTCAAAATGAATGTCGTTTA+AGG | - | chr5_1:70589379-70589398 | Msa0746960:intron | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | + | chr5_1:70589470-70589489 | None:intergenic | 25.0% |
| ! | TAAATAATCTGGACAATTGT+AGG | + | chr5_1:70589677-70589696 | None:intergenic | 25.0% |
| ! | CTTACACAACTTAAATAATC+TGG | + | chr5_1:70589688-70589707 | None:intergenic | 25.0% |
| ! | TTCAGAAATCAGTTTAATAG+AGG | - | chr5_1:70590039-70590058 | Msa0746960:intron | 25.0% |
| ! | TGAGAAATTAAAGAGAGAAA+GGG | + | chr5_1:70590234-70590253 | None:intergenic | 25.0% |
| ! | TTGAGAAATTAAAGAGAGAA+AGG | + | chr5_1:70590235-70590254 | None:intergenic | 25.0% |
| ! | CATGTTGCATTTCATTTAAT+TGG | + | chr5_1:70590518-70590537 | None:intergenic | 25.0% |
| ! | CCATAATTTAAGAACGTAAA+AGG | + | chr5_1:70590577-70590596 | None:intergenic | 25.0% |
| !! | CCTTTTACGTTCTTAAATTA+TGG | - | chr5_1:70590574-70590593 | Msa0746960:intron | 25.0% |
| ! | TTTCAATAACTTGAATTGCT+TGG | - | chr5_1:70590698-70590717 | Msa0746960:intron | 25.0% |
| ! | AAAGTATACAAACAACTACA+TGG | + | chr5_1:70590871-70590890 | None:intergenic | 25.0% |
| ! | GAAGTAAAGTCTATTGTATA+CGG | + | chr5_1:70591280-70591299 | None:intergenic | 25.0% |
| ! | CTTACACTTAAAAAAATGTC+TGG | - | chr5_1:70591978-70591997 | Msa0746960:intron | 25.0% |
| ! | TACACTTAAAAAAATGTCTG+GGG | - | chr5_1:70591980-70591999 | Msa0746960:intron | 25.0% |
| !!! | TTTGAACTTTGAAGTAAAAG+AGG | + | chr5_1:70592168-70592187 | None:intergenic | 25.0% |
| ! | CAAAATGCAATTACAGAAAT+AGG | - | chr5_1:70592184-70592203 | Msa0746960:intron | 25.0% |
| ! | AAATGCAATTACAGAAATAG+GGG | - | chr5_1:70592186-70592205 | Msa0746960:intron | 25.0% |
| !!! | TACTTGTCTTTCTTATTTTG+TGG | - | chr5_1:70592228-70592247 | Msa0746960:intron | 25.0% |
| ! | GGTATCCATACATATATAAT+CGG | - | chr5_1:70592416-70592435 | Msa0746960:intron | 25.0% |
| ! | GTATCCATACATATATAATC+GGG | - | chr5_1:70592417-70592436 | Msa0746960:intron | 25.0% |
| !!! | TAGTTTTAGGATACGATAAA+TGG | + | chr5_1:70592876-70592895 | None:intergenic | 25.0% |
| ! | ATATATTGGATGCATCTTTA+AGG | - | chr5_1:70592897-70592916 | Msa0746960:intron | 25.0% |
| !! | TGTTTTTCTTTTCTTTTTCC+AGG | - | chr5_1:70592930-70592949 | Msa0746960:intron | 25.0% |
| ! | AAAGAAACAGAAAACTAATG+AGG | - | chr5_1:70593902-70593921 | Msa0746960:intron | 25.0% |
| ! | AAGAAACAGAAAACTAATGA+GGG | - | chr5_1:70593903-70593922 | Msa0746960:intron | 25.0% |
| ! | CCAAAATTTAGTTATGATGA+TGG | + | chr5_1:70593972-70593991 | None:intergenic | 25.0% |
| !! | CCATCATCATAACTAAATTT+TGG | - | chr5_1:70593969-70593988 | Msa0746960:intron | 25.0% |
| !! | GATTTTTATTATTGCCTTTC+AGG | - | chr5_1:70594095-70594114 | Msa0746960:five_prime_UTR | 25.0% |
| TGAAGAAGAAAGGGTTTATT+TGG | + | chr5_1:70587308-70587327 | None:intergenic | 30.0% | |
| AAATATTCATACCTGTTCAG+TGG | + | chr5_1:70587451-70587470 | None:intergenic | 30.0% | |
| TTTCACACTGCTTAATTTCT+AGG | - | chr5_1:70587468-70587487 | Msa0746960:three_prime_UTR | 30.0% | |
| TTCACACTGCTTAATTTCTA+GGG | - | chr5_1:70587469-70587488 | Msa0746960:exon | 30.0% | |
| AGCTATGTCTTTCAATGTAT+TGG | - | chr5_1:70587527-70587546 | Msa0746960:CDS | 30.0% | |
| TAAAGATGTAGTATAAGGGT+AGG | + | chr5_1:70588354-70588373 | None:intergenic | 30.0% | |
| GTTATCATGAAAACATTCTG+TGG | + | chr5_1:70588423-70588442 | None:intergenic | 30.0% | |
| AGAAGATGATTCACAATTGT+GGG | + | chr5_1:70588490-70588509 | None:intergenic | 30.0% | |
| TAGAAGATGATTCACAATTG+TGG | + | chr5_1:70588491-70588510 | None:intergenic | 30.0% | |
| AGGAATGTACTTAGTATAAC+AGG | + | chr5_1:70588548-70588567 | None:intergenic | 30.0% | |
| CATAGCGTTAATATTGACAA+AGG | + | chr5_1:70588568-70588587 | None:intergenic | 30.0% | |
| ! | TTAATTAGTGTTGAGAACCA+AGG | - | chr5_1:70588648-70588667 | Msa0746960:intron | 30.0% |
| ! | TAATTAGTGTTGAGAACCAA+GGG | - | chr5_1:70588649-70588668 | Msa0746960:intron | 30.0% |
| !!! | TTCTAATTTTGGTTATGCAG+TGG | - | chr5_1:70588818-70588837 | Msa0746960:intron | 30.0% |
| CAAGCATAATTAATAGTACC+TGG | + | chr5_1:70588970-70588989 | None:intergenic | 30.0% | |
| AAGATAATATCACACATCCA+AGG | + | chr5_1:70589168-70589187 | None:intergenic | 30.0% | |
| GAAAGGCAATATAAATGACT+AGG | + | chr5_1:70589194-70589213 | None:intergenic | 30.0% | |
| CAAATAATCTGGACAATTGT+AGG | - | chr5_1:70589213-70589232 | Msa0746960:intron | 30.0% | |
| !!! | GACATTCATTTTGAAACAGA+GGG | + | chr5_1:70589374-70589393 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr5_1:70589631-70589650 | Msa0746960:CDS | 30.0% |
| !! | GTAATTTGTTGTAGTTTGGA+GGG | + | chr5_1:70590002-70590021 | None:intergenic | 30.0% |
| !! | TTGGGTAATTTGTTGTAGTT+TGG | + | chr5_1:70590006-70590025 | None:intergenic | 30.0% |
| TCTTTGCTTCTATTCAAACA+TGG | + | chr5_1:70590133-70590152 | None:intergenic | 30.0% | |
| GAGAAATTAAAGAGAGAAAG+GGG | + | chr5_1:70590233-70590252 | None:intergenic | 30.0% | |
| TAATTTCTCAAGATAACCAC+TGG | - | chr5_1:70590244-70590263 | Msa0746960:intron | 30.0% | |
| !! | GTTGATTTATCCAATGCTTT+TGG | - | chr5_1:70590317-70590336 | Msa0746960:intron | 30.0% |
| AAATTCTTAAGCACTTGAAC+TGG | + | chr5_1:70590831-70590850 | None:intergenic | 30.0% | |
| AAATTGTTTCCAGTGAAGAA+AGG | + | chr5_1:70591195-70591214 | None:intergenic | 30.0% | |
| CAAAATATATTTGCAGAGCT+TGG | - | chr5_1:70591253-70591272 | Msa0746960:intron | 30.0% | |
| ACAATAGACTTTACTTCAAG+TGG | - | chr5_1:70591283-70591302 | Msa0746960:intron | 30.0% | |
| !!! | AATTCACTTTTTTCACACAC+AGG | - | chr5_1:70591643-70591662 | Msa0746960:intron | 30.0% |
| GTGCTTCGTAAAATTATTCT+TGG | - | chr5_1:70591729-70591748 | Msa0746960:intron | 30.0% | |
| AAGGAGAAATTACTTTCTCT+GGG | + | chr5_1:70591835-70591854 | None:intergenic | 30.0% | |
| !! | TGTTTTTGTTCTCTGTAGAA+TGG | - | chr5_1:70591887-70591906 | Msa0746960:intron | 30.0% |
| TAGAATGGATCAGTACAATT+AGG | - | chr5_1:70591902-70591921 | Msa0746960:intron | 30.0% | |
| AGAATGGATCAGTACAATTA+GGG | - | chr5_1:70591903-70591922 | Msa0746960:intron | 30.0% | |
| TACAATTAGGGAAATAAGAG+TGG | - | chr5_1:70591915-70591934 | Msa0746960:intron | 30.0% | |
| ACACTTAAAAAAATGTCTGG+GGG | - | chr5_1:70591981-70592000 | Msa0746960:intron | 30.0% | |
| TACTTTAATGATGCGAAATG+TGG | + | chr5_1:70592109-70592128 | None:intergenic | 30.0% | |
| !! | AACATTTCTAGCATCATCAA+TGG | + | chr5_1:70592506-70592525 | None:intergenic | 30.0% |
| ATGATGCTAGAAATGTTTCT+CGG | - | chr5_1:70592509-70592528 | Msa0746960:CDS | 30.0% | |
| !!! | CTAGTGGGTTTTTTATTTGA+CGG | - | chr5_1:70592589-70592608 | Msa0746960:CDS | 30.0% |
| !!! | TAGTGGGTTTTTTATTTGAC+GGG | - | chr5_1:70592590-70592609 | Msa0746960:CDS | 30.0% |
| TCAATTGTCTTTCTGAATAC+TGG | - | chr5_1:70592732-70592751 | Msa0746960:intron | 30.0% | |
| ! | AATGAAAAAAAGCACACTGT+AGG | + | chr5_1:70592807-70592826 | None:intergenic | 30.0% |
| TCTTTATCAGGATGTTACAA+TGG | - | chr5_1:70593029-70593048 | Msa0746960:intron | 30.0% | |
| CTTTATCAGGATGTTACAAT+GGG | - | chr5_1:70593030-70593049 | Msa0746960:intron | 30.0% | |
| ATGGAATTAAACCCTTACAA+CGG | - | chr5_1:70593099-70593118 | Msa0746960:intron | 30.0% | |
| !!! | CTTAATTTTTTTGTCTACCC+CGG | + | chr5_1:70593265-70593284 | None:intergenic | 30.0% |
| ! | TAAACTCCAAAGTATTTGCA+TGG | + | chr5_1:70593332-70593351 | None:intergenic | 30.0% |
| !! | ACTTTGGAGTTTAGTCAAAA+AGG | - | chr5_1:70593339-70593358 | Msa0746960:intron | 30.0% |
| ATGACTCATTCAATGGTTAA+GGG | - | chr5_1:70593438-70593457 | Msa0746960:intron | 30.0% | |
| ! | GAAAAGCTAATTTTCCTATC+TGG | + | chr5_1:70593467-70593486 | None:intergenic | 30.0% |
| TCTGTTTAGGTGTTTCAAAT+GGG | + | chr5_1:70593590-70593609 | None:intergenic | 30.0% | |
| !! | GTTTTGATATTTGTAGCCTT+TGG | - | chr5_1:70594061-70594080 | Msa0746960:exon | 30.0% |
| ! | TTATTATTGCCTTTCAGGTA+AGG | - | chr5_1:70594100-70594119 | Msa0746960:five_prime_UTR | 30.0% |
| GTTGAATGCAAAAATGAACA+AGG | + | chr5_1:70594150-70594169 | None:intergenic | 30.0% | |
| ! | TCATTTATGGTTAAAGGTGT+AGG | + | chr5_1:70594176-70594195 | None:intergenic | 30.0% |
| ! | TATTCCTTACATCGTTTTGC+AGG | - | chr5_1:70587668-70587687 | Msa0746960:CDS | 35.0% |
| TTGCTGATGAACTAGAACTT+AGG | - | chr5_1:70587694-70587713 | Msa0746960:CDS | 35.0% | |
| AGGAGAAGCTGCTAATTTAA+AGG | - | chr5_1:70587734-70587753 | Msa0746960:CDS | 35.0% | |
| CACACTGTACAATAATTCAC+TGG | + | chr5_1:70587990-70588009 | None:intergenic | 35.0% | |
| CTACCTAGAAGTTACTGAAA+CGG | + | chr5_1:70588525-70588544 | None:intergenic | 35.0% | |
| !!! | CTACTGGATTTCGTTTTTTG+AGG | - | chr5_1:70588674-70588693 | Msa0746960:intron | 35.0% |
| !!! | GGATTTCGTTTTTTGAGGAT+TGG | - | chr5_1:70588679-70588698 | Msa0746960:intron | 35.0% |
| TAGTGACAGTGTGTGAAAAA+AGG | - | chr5_1:70588702-70588721 | Msa0746960:intron | 35.0% | |
| GTTTGATCTTGTGTAACTTG+TGG | - | chr5_1:70588724-70588743 | Msa0746960:intron | 35.0% | |
| AAGGCATAGAAAAGACGTAT+AGG | - | chr5_1:70588875-70588894 | Msa0746960:intron | 35.0% | |
| AAAGACGTATAGGATTAAGC+AGG | - | chr5_1:70588885-70588904 | Msa0746960:intron | 35.0% | |
| AAGTAGATATCTCAAGCTCA+AGG | - | chr5_1:70588923-70588942 | Msa0746960:intron | 35.0% | |
| TAATATCACACATCCAAGGT+TGG | + | chr5_1:70589164-70589183 | None:intergenic | 35.0% | |
| AGGCAATATAAATGACTAGG+AGG | + | chr5_1:70589191-70589210 | None:intergenic | 35.0% | |
| ACTTCACTGATATTTGGTAG+AGG | + | chr5_1:70589278-70589297 | None:intergenic | 35.0% | |
| !!! | CGACATTCATTTTGAAACAG+AGG | + | chr5_1:70589375-70589394 | None:intergenic | 35.0% |
| ! | TGGATTGGATTTATGGGATA+GGG | + | chr5_1:70589739-70589758 | None:intergenic | 35.0% |
| !! | ATGGATTGGATTTATGGGAT+AGG | + | chr5_1:70589740-70589759 | None:intergenic | 35.0% |
| !! | GGTAATTTGTTGTAGTTTGG+AGG | + | chr5_1:70590003-70590022 | None:intergenic | 35.0% |
| CTGAATGACAGCAAGAAATT+GGG | + | chr5_1:70590024-70590043 | None:intergenic | 35.0% | |
| TCTGAATGACAGCAAGAAAT+TGG | + | chr5_1:70590025-70590044 | None:intergenic | 35.0% | |
| ! | TGTTTGTGGCTATAATGGAA+AGG | + | chr5_1:70590080-70590099 | None:intergenic | 35.0% |
| AACAAAAACAGCACTGTTTG+TGG | + | chr5_1:70590094-70590113 | None:intergenic | 35.0% | |
| ! | TATCCAATGCTTTTGGATGT+TGG | - | chr5_1:70590324-70590343 | Msa0746960:intron | 35.0% |
| ! | ATTCCAACATCCAAAAGCAT+TGG | + | chr5_1:70590330-70590349 | None:intergenic | 35.0% |
| ATACCAAGTGATCATCTCAT+AGG | - | chr5_1:70590896-70590915 | Msa0746960:intron | 35.0% | |
| TAACCTATGAGATGATCACT+TGG | + | chr5_1:70590902-70590921 | None:intergenic | 35.0% | |
| AGTGAGGACTTATCAACAAT+AGG | + | chr5_1:70590945-70590964 | None:intergenic | 35.0% | |
| !! | TACAAATTGTTGAAGCACTG+TGG | - | chr5_1:70590996-70591015 | Msa0746960:intron | 35.0% |
| CAAGGATAAAGTCAAAGGAA+AGG | + | chr5_1:70591099-70591118 | None:intergenic | 35.0% | |
| ! | CTTTCCTTTGACTTTATCCT+TGG | - | chr5_1:70591097-70591116 | Msa0746960:intron | 35.0% |
| TACTCCAAGGATAAAGTCAA+AGG | + | chr5_1:70591104-70591123 | None:intergenic | 35.0% | |
| ACTAGTACAAAGTTACTCCA+AGG | + | chr5_1:70591117-70591136 | None:intergenic | 35.0% | |
| TCATCATGTCCATAATTGCT+AGG | + | chr5_1:70591342-70591361 | None:intergenic | 35.0% | |
| ! | TTAACCAAGCTTGCTTTGTT+TGG | - | chr5_1:70591394-70591413 | Msa0746960:intron | 35.0% |
| AAAACCAAACAAAGCAAGCT+TGG | + | chr5_1:70591401-70591420 | None:intergenic | 35.0% | |
| !!! | AGTTGTTTTAGTGCTTCTCT+CGG | + | chr5_1:70591558-70591577 | None:intergenic | 35.0% |
| TTTCACACACAGGAAACAAA+TGG | - | chr5_1:70591653-70591672 | Msa0746960:intron | 35.0% | |
| TTCACACACAGGAAACAAAT+GGG | - | chr5_1:70591654-70591673 | Msa0746960:intron | 35.0% | |
| GAAGGAGAAATTACTTTCTC+TGG | + | chr5_1:70591836-70591855 | None:intergenic | 35.0% | |
| AGAAAGTAATTTCTCCTTCC+TGG | - | chr5_1:70591837-70591856 | Msa0746960:intron | 35.0% | |
| ! | TGTCAGAAAGCATGAATAAC+AGG | + | chr5_1:70592051-70592070 | None:intergenic | 35.0% |
| TGATGCGAAATGTGGTATTT+CGG | + | chr5_1:70592101-70592120 | None:intergenic | 35.0% | |
| GAAGTAAAAGAGGAAGCAAA+TGG | + | chr5_1:70592158-70592177 | None:intergenic | 35.0% | |
| ACTCGACATGAAGAAGAATA+TGG | + | chr5_1:70592370-70592389 | None:intergenic | 35.0% | |
| CCATACATATATAATCGGGA+CGG | - | chr5_1:70592421-70592440 | Msa0746960:intron | 35.0% | |
| CTGTATTATCCACCATTCAT+CGG | - | chr5_1:70592625-70592644 | Msa0746960:intron | 35.0% | |
| AAAATCAGGCTTGTGAATTG+AGG | + | chr5_1:70592680-70592699 | None:intergenic | 35.0% | |
| TTGATCCACACATCAAAATC+AGG | + | chr5_1:70592694-70592713 | None:intergenic | 35.0% | |
| ATTCAGAAAGACAATTGACG+CGG | + | chr5_1:70592730-70592749 | None:intergenic | 35.0% | |
| ! | TCTGGAAAACCATTTTCTTC+TGG | - | chr5_1:70592981-70593000 | Msa0746960:intron | 35.0% |
| TGGCTTCTACCAACAAATTT+GGG | - | chr5_1:70593001-70593020 | Msa0746960:intron | 35.0% | |
| !! | AAGAAGCATCCCAAATTTGT+TGG | + | chr5_1:70593013-70593032 | None:intergenic | 35.0% |
| ! | ATTTGGGATGCTTCTTTATC+AGG | - | chr5_1:70593017-70593036 | Msa0746960:intron | 35.0% |
| TTACAATGGGTACAATAGCT+GGG | - | chr5_1:70593043-70593062 | Msa0746960:intron | 35.0% | |
| TGGAATTAAACCCTTACAAC+GGG | - | chr5_1:70593100-70593119 | Msa0746960:intron | 35.0% | |
| ATGACATAGCATCTTGACAA+GGG | + | chr5_1:70593187-70593206 | None:intergenic | 35.0% | |
| TCAAGATGCTATGTCATCAA+GGG | - | chr5_1:70593190-70593209 | Msa0746960:intron | 35.0% | |
| !! | AAATTAAGCTTTGGGACTTG+AGG | - | chr5_1:70593277-70593296 | Msa0746960:intron | 35.0% |
| !! | TGGTAATGGTTCATATATCC+AGG | - | chr5_1:70593374-70593393 | Msa0746960:intron | 35.0% |
| ! | TTCATATATCCAGGTTCTGA+GGG | - | chr5_1:70593383-70593402 | Msa0746960:intron | 35.0% |
| AAGGTACATGACTCATTCAA+TGG | - | chr5_1:70593431-70593450 | Msa0746960:intron | 35.0% | |
| CATGACTCATTCAATGGTTA+AGG | - | chr5_1:70593437-70593456 | Msa0746960:intron | 35.0% | |
| TTGTCTAGTATCCTTATTCC+AGG | - | chr5_1:70593528-70593547 | Msa0746960:CDS | 35.0% | |
| AGAACCCAACTTTGATTCAT+GGG | - | chr5_1:70593557-70593576 | Msa0746960:CDS | 35.0% | |
| CTCTGTTTAGGTGTTTCAAA+TGG | + | chr5_1:70593591-70593610 | None:intergenic | 35.0% | |
| ACCTAAACAGAGAAGAGAAA+AGG | - | chr5_1:70593599-70593618 | Msa0746960:intron | 35.0% | |
| ! | TCCTTTTCTCTTCTCTGTTT+AGG | + | chr5_1:70593603-70593622 | None:intergenic | 35.0% |
| GAAAACAAAAGGAAGAAGCA+AGG | - | chr5_1:70593785-70593804 | Msa0746960:intron | 35.0% | |
| !!! | GCAATTGCATCTTGCTTTTT+AGG | + | chr5_1:70593825-70593844 | None:intergenic | 35.0% |
| ! | TGAATTTTCTGCTCCAAGTA+AGG | + | chr5_1:70593861-70593880 | None:intergenic | 35.0% |
| AACTGCCAAAATCTTTACAG+CGG | - | chr5_1:70593931-70593950 | Msa0746960:intron | 35.0% | |
| ! | ACAAACCGCTGTAAAGATTT+TGG | + | chr5_1:70593939-70593958 | None:intergenic | 35.0% |
| !! | AAATCGATTTCTAAGGCCAA+AGG | + | chr5_1:70594080-70594099 | None:intergenic | 35.0% |
| ! | AGGTAAGGCAGATCAAATTT+TGG | - | chr5_1:70594115-70594134 | Msa0746960:five_prime_UTR | 35.0% |
| !! | TCAGTGGAAGGCTTGTTATT+TGG | + | chr5_1:70587435-70587454 | None:intergenic | 40.0% |
| ATTCATACCTGTTCAGTGGA+AGG | + | chr5_1:70587447-70587466 | None:intergenic | 40.0% | |
| ATGTCCTGCAAAACGATGTA+AGG | + | chr5_1:70587675-70587694 | None:intergenic | 40.0% | |
| !! | AGGTCAAAGAAGTATCTCAG+AGG | - | chr5_1:70587714-70587733 | Msa0746960:CDS | 40.0% |
| ATTTGTAAGCAACACCCACA+CGG | + | chr5_1:70588054-70588073 | None:intergenic | 40.0% | |
| AGGCTGATAACTAACCTTGT+AGG | - | chr5_1:70588289-70588308 | Msa0746960:CDS | 40.0% | |
| CATCTTGATCACAACCTACA+AGG | + | chr5_1:70588306-70588325 | None:intergenic | 40.0% | |
| CTTGTAGGTTGTGATCAAGA+TGG | - | chr5_1:70588304-70588323 | Msa0746960:CDS | 40.0% | |
| TAGCCGTTTCAGTAACTTCT+AGG | - | chr5_1:70588519-70588538 | Msa0746960:intron | 40.0% | |
| TCTATATAACCTCCTTCGCT+AGG | + | chr5_1:70588850-70588869 | None:intergenic | 40.0% | |
| TAGCGAAGGAGGTTATATAG+AGG | - | chr5_1:70588849-70588868 | Msa0746960:intron | 40.0% | |
| ATTAAGCAGGAGACAATAGC+CGG | - | chr5_1:70588898-70588917 | Msa0746960:intron | 40.0% | |
| GCTTGAGATATCTACTTCAC+CGG | + | chr5_1:70588920-70588939 | None:intergenic | 40.0% | |
| GAAATCAACCAATCCAACCT+TGG | - | chr5_1:70589148-70589167 | Msa0746960:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr5_1:70589635-70589654 | Msa0746960:CDS | 40.0% |
| !!! | TTTTGAAACGGAGGGAGTAT+TGG | - | chr5_1:70589643-70589662 | Msa0746960:CDS | 40.0% |
| ! | AAGAAGAAAGAGTGCATGAG+AGG | + | chr5_1:70589839-70589858 | None:intergenic | 40.0% |
| AGCACTGTTTGTGGCTATAA+TGG | + | chr5_1:70590085-70590104 | None:intergenic | 40.0% | |
| AGGAAAAAAGCTGACTGGAA+GGG | + | chr5_1:70590188-70590207 | None:intergenic | 40.0% | |
| ATGTTGGAATGTGAGTGCTT+GGG | - | chr5_1:70590340-70590359 | Msa0746960:intron | 40.0% | |
| AGCTTCTATCTACTTCTAGC+AGG | + | chr5_1:70590418-70590437 | None:intergenic | 40.0% | |
| CTGTGCTCAGGCATTTATTA+GGG | + | chr5_1:70590451-70590470 | None:intergenic | 40.0% | |
| ! | GTTTTGCAGCCAGATAACTT+GGG | + | chr5_1:70590604-70590623 | None:intergenic | 40.0% |
| TCCAGTATCAAGCTGCAAAA+AGG | - | chr5_1:70590786-70590805 | Msa0746960:intron | 40.0% | |
| ! | ACCTTTTTGCAGCTTGATAC+TGG | + | chr5_1:70590790-70590809 | None:intergenic | 40.0% |
| TTAAGCACTTGAACTGGTAG+TGG | + | chr5_1:70590825-70590844 | None:intergenic | 40.0% | |
| TGCACATAACCTTTCTTCAC+TGG | - | chr5_1:70591183-70591202 | Msa0746960:intron | 40.0% | |
| TAGACTTTACTTCAAGTGGC+CGG | - | chr5_1:70591287-70591306 | Msa0746960:intron | 40.0% | |
| TCATGTCCATAATTGCTAGG+TGG | + | chr5_1:70591339-70591358 | None:intergenic | 40.0% | |
| GATACTCATCATGCCTTCTT+TGG | - | chr5_1:70591483-70591502 | Msa0746960:intron | 40.0% | |
| !! | TGAAGATACGCAGCTCTAAA+TGG | + | chr5_1:70591515-70591534 | None:intergenic | 40.0% |
| ATGGGCCTTACATCTAATGT+CGG | - | chr5_1:70591672-70591691 | Msa0746960:intron | 40.0% | |
| TCTCTCCGACATTAGATGTA+AGG | + | chr5_1:70591680-70591699 | None:intergenic | 40.0% | |
| AAATGGTAGAACAGCAAACC+AGG | + | chr5_1:70591858-70591877 | None:intergenic | 40.0% | |
| TAGGGAAATAAGAGTGGCTT+AGG | - | chr5_1:70591921-70591940 | Msa0746960:intron | 40.0% | |
| AGGGAAATAAGAGTGGCTTA+GGG | - | chr5_1:70591922-70591941 | Msa0746960:intron | 40.0% | |
| ATGAATAACAGGCAGAGAAG+TGG | + | chr5_1:70592040-70592059 | None:intergenic | 40.0% | |
| GATGCGAAATGTGGTATTTC+GGG | + | chr5_1:70592100-70592119 | None:intergenic | 40.0% | |
| CCGTCCCGATTATATATGTA+TGG | + | chr5_1:70592424-70592443 | None:intergenic | 40.0% | |
| CAAGCAGTTAACCAACCTTA+AGG | + | chr5_1:70592462-70592481 | None:intergenic | 40.0% | |
| CTAGCACATATGTAACTGGA+TGG | + | chr5_1:70592573-70592592 | None:intergenic | 40.0% | |
| TCCAGTTACATATGTGCTAG+TGG | - | chr5_1:70592573-70592592 | Msa0746960:CDS | 40.0% | |
| CCAGTTACATATGTGCTAGT+GGG | - | chr5_1:70592574-70592593 | Msa0746960:CDS | 40.0% | |
| !! | CGATGAATGGTGGATAATAC+AGG | + | chr5_1:70592627-70592646 | None:intergenic | 40.0% |
| TATTATCCACCATTCATCGG+AGG | - | chr5_1:70592628-70592647 | Msa0746960:intron | 40.0% | |
| TTAATGCAACCTCCGATGAA+TGG | + | chr5_1:70592640-70592659 | None:intergenic | 40.0% | |
| !! | ACAAGCCTGATTTTGATGTG+TGG | - | chr5_1:70592686-70592705 | Msa0746960:intron | 40.0% |
| !! | TCTTTCTGAATACTGGCTTG+AGG | - | chr5_1:70592739-70592758 | Msa0746960:intron | 40.0% |
| ! | CTTTTCTTTTTCCAGGAGCA+TGG | - | chr5_1:70592937-70592956 | Msa0746960:intron | 40.0% |
| TGGTAGAAGCCAGAAGAAAA+TGG | + | chr5_1:70592993-70593012 | None:intergenic | 40.0% | |
| CTGGCTTCTACCAACAAATT+TGG | - | chr5_1:70593000-70593019 | Msa0746960:intron | 40.0% | |
| GTTACAATGGGTACAATAGC+TGG | - | chr5_1:70593042-70593061 | Msa0746960:intron | 40.0% | |
| ATAGCTGGGAAATTTCGAAC+TGG | - | chr5_1:70593057-70593076 | Msa0746960:intron | 40.0% | |
| ! | GGGAAATTTCGAACTGGTTT+AGG | - | chr5_1:70593063-70593082 | Msa0746960:intron | 40.0% |
| ! | TTTAGGACGCACAAATGTGA+TGG | - | chr5_1:70593080-70593099 | Msa0746960:intron | 40.0% |
| GGAATTAAACCCTTACAACG+GGG | - | chr5_1:70593101-70593120 | Msa0746960:intron | 40.0% | |
| AAGAAACAACCCCGTTGTAA+GGG | + | chr5_1:70593113-70593132 | None:intergenic | 40.0% | |
| AAAGAAACAACCCCGTTGTA+AGG | + | chr5_1:70593114-70593133 | None:intergenic | 40.0% | |
| !! | TACAACGGGGTTGTTTCTTT+AGG | - | chr5_1:70593114-70593133 | Msa0746960:intron | 40.0% |
| CTTCCACATAGTAACTGTAC+CGG | + | chr5_1:70593148-70593167 | None:intergenic | 40.0% | |
| TGACATAGCATCTTGACAAG+GGG | + | chr5_1:70593186-70593205 | None:intergenic | 40.0% | |
| GATGACATAGCATCTTGACA+AGG | + | chr5_1:70593188-70593207 | None:intergenic | 40.0% | |
| GTCAAGATGCTATGTCATCA+AGG | - | chr5_1:70593189-70593208 | Msa0746960:intron | 40.0% | |
| TCACTCAAATGGCCACTTAA+TGG | - | chr5_1:70593233-70593252 | Msa0746960:intron | 40.0% | |
| TTGGGACTTGAGGAAATTTG+AGG | - | chr5_1:70593287-70593306 | Msa0746960:intron | 40.0% | |
| ACCAAGCCATGCAAATACTT+TGG | - | chr5_1:70593323-70593342 | Msa0746960:intron | 40.0% | |
| ! | TCCAAAGTATTTGCATGGCT+TGG | + | chr5_1:70593327-70593346 | None:intergenic | 40.0% |
| GTTCATATATCCAGGTTCTG+AGG | - | chr5_1:70593382-70593401 | Msa0746960:intron | 40.0% | |
| ATGGTTAAGGGATACCAGAT+AGG | - | chr5_1:70593450-70593469 | Msa0746960:intron | 40.0% | |
| TCTAGGCATAGGACATTCAA+TGG | - | chr5_1:70593503-70593522 | Msa0746960:intron | 40.0% | |
| CTAGGCATAGGACATTCAAT+GGG | - | chr5_1:70593504-70593523 | Msa0746960:intron | 40.0% | |
| GAGAACCCAACTTTGATTCA+TGG | - | chr5_1:70593556-70593575 | Msa0746960:CDS | 40.0% | |
| GCAACCCATGAATCAAAGTT+GGG | + | chr5_1:70593564-70593583 | None:intergenic | 40.0% | |
| TGCAACCCATGAATCAAAGT+TGG | + | chr5_1:70593565-70593584 | None:intergenic | 40.0% | |
| ATGCAATTGCCAATGCAAAG+AGG | - | chr5_1:70593835-70593854 | Msa0746960:intron | 40.0% | |
| TTTGATCTGCCTTACCTGAA+AGG | + | chr5_1:70594112-70594131 | None:intergenic | 40.0% | |
| GTTGTGTGACTGGTAAACGT+AGG | + | chr5_1:70587251-70587270 | None:intergenic | 45.0% | |
| TCTGTGTTGTGTTGTGTGAC+TGG | + | chr5_1:70587261-70587280 | None:intergenic | 45.0% | |
| GTCACACAACACAACACAGA+CGG | - | chr5_1:70587261-70587280 | Msa0746960:three_prime_UTR | 45.0% | |
| GAGTTTCTTCCATCTTGCAC+CGG | + | chr5_1:70587395-70587414 | None:intergenic | 45.0% | |
| !! | GTGGAAGGCTTGTTATTTGG+AGG | + | chr5_1:70587432-70587451 | None:intergenic | 45.0% |
| TAACAAGCCTTCCACTGAAC+AGG | - | chr5_1:70587437-70587456 | Msa0746960:three_prime_UTR | 45.0% | |
| GTGGTGAATTATCGTTGAGC+CGG | - | chr5_1:70588131-70588150 | Msa0746960:CDS | 45.0% | |
| TGGTGAATTATCGTTGAGCC+GGG | - | chr5_1:70588132-70588151 | Msa0746960:CDS | 45.0% | |
| CACAATTGTGGGTAACTGCA+AGG | + | chr5_1:70588479-70588498 | None:intergenic | 45.0% | |
| TTGAGAACCAAGGGATCTAC+TGG | - | chr5_1:70588658-70588677 | Msa0746960:intron | 45.0% | |
| ACGAAATCCAGTAGATCCCT+TGG | + | chr5_1:70588668-70588687 | None:intergenic | 45.0% | |
| GGAGGTTATATAGAGGCTGA+AGG | - | chr5_1:70588856-70588875 | Msa0746960:intron | 45.0% | |
| TCACACATCCAAGGTTGGAT+TGG | + | chr5_1:70589159-70589178 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr5_1:70589634-70589653 | Msa0746960:CDS | 45.0% |
| ACACACACACACACACACAT+TGG | - | chr5_1:70589942-70589961 | Msa0746960:intron | 45.0% | |
| GAGGAAAAAAGCTGACTGGA+AGG | + | chr5_1:70590189-70590208 | None:intergenic | 45.0% | |
| ! | GAGAAAGGGGCTCTTTTCAA+GGG | + | chr5_1:70590220-70590239 | None:intergenic | 45.0% |
| ! | AGAGAAAGGGGCTCTTTTCA+AGG | + | chr5_1:70590221-70590240 | None:intergenic | 45.0% |
| !! | AGCGCTGGCAGAAAAACAAA+AGG | + | chr5_1:70590287-70590306 | None:intergenic | 45.0% |
| !! | TTGTTTTTCTGCCAGCGCTT+CGG | - | chr5_1:70590288-70590307 | Msa0746960:intron | 45.0% |
| GATGTTGGAATGTGAGTGCT+TGG | - | chr5_1:70590339-70590358 | Msa0746960:intron | 45.0% | |
| TGTTGGAATGTGAGTGCTTG+GGG | - | chr5_1:70590341-70590360 | Msa0746960:intron | 45.0% | |
| ATCAACCAGTGCTCAGACAT+TGG | - | chr5_1:70590382-70590401 | Msa0746960:intron | 45.0% | |
| ATCTACTTCTAGCAGGAGCT+GGG | + | chr5_1:70590411-70590430 | None:intergenic | 45.0% | |
| TATCTACTTCTAGCAGGAGC+TGG | + | chr5_1:70590412-70590431 | None:intergenic | 45.0% | |
| CCTGTGCTCAGGCATTTATT+AGG | + | chr5_1:70590452-70590471 | None:intergenic | 45.0% | |
| CCTAATAAATGCCTGAGCAC+AGG | - | chr5_1:70590449-70590468 | Msa0746960:intron | 45.0% | |
| TATGTAGGTAACCTGTGCTC+AGG | + | chr5_1:70590463-70590482 | None:intergenic | 45.0% | |
| TATGGCGAACCCAAGTTATC+TGG | - | chr5_1:70590592-70590611 | Msa0746960:intron | 45.0% | |
| ! | GGTTTTGCAGCCAGATAACT+TGG | + | chr5_1:70590605-70590624 | None:intergenic | 45.0% |
| GCAAAACCAAACCACTGTAC+TGG | - | chr5_1:70590617-70590636 | Msa0746960:intron | 45.0% | |
| AAACCAAACCACTGTACTGG+AGG | - | chr5_1:70590620-70590639 | Msa0746960:intron | 45.0% | |
| TACTTCAAGTGGCCGGTATA+TGG | - | chr5_1:70591294-70591313 | Msa0746960:intron | 45.0% | |
| GACCACCAATAGCCATATAC+CGG | + | chr5_1:70591309-70591328 | None:intergenic | 45.0% | |
| ! | TATGGCTATTGGTGGTCGTA+AGG | - | chr5_1:70591312-70591331 | Msa0746960:intron | 45.0% |
| ! | ATGGCTATTGGTGGTCGTAA+GGG | - | chr5_1:70591313-70591332 | Msa0746960:intron | 45.0% |
| TAAGGGCCACCTAGCAATTA+TGG | - | chr5_1:70591330-70591349 | Msa0746960:intron | 45.0% | |
| TGATGAATCTGAGCCTGATC+AGG | - | chr5_1:70591356-70591375 | Msa0746960:intron | 45.0% | |
| GATGAATCTGAGCCTGATCA+GGG | - | chr5_1:70591357-70591376 | Msa0746960:intron | 45.0% | |
| CTCATCATGCCTTCTTTGGA+CGG | - | chr5_1:70591487-70591506 | Msa0746960:intron | 45.0% | |
| TCATCATGCCTTCTTTGGAC+GGG | - | chr5_1:70591488-70591507 | Msa0746960:intron | 45.0% | |
| TAAATGGTCCCGTCCAAAGA+AGG | + | chr5_1:70591499-70591518 | None:intergenic | 45.0% | |
| AAGAGAAACTGTGCGTGATG+TGG | - | chr5_1:70591776-70591795 | Msa0746960:intron | 45.0% | |
| AAAAAAATGTCTGGGGGCAG+AGG | - | chr5_1:70591987-70592006 | Msa0746960:intron | 45.0% | |
| AAACCCTGTGAGATTGTTCG+CGG | - | chr5_1:70592278-70592297 | Msa0746960:intron | 45.0% | |
| ! | TTCGCGGCTTGATGTTTTCT+TGG | - | chr5_1:70592294-70592313 | Msa0746960:intron | 45.0% |
| CACAGAGCTTCATTGCCTTA+AGG | - | chr5_1:70592444-70592463 | Msa0746960:intron | 45.0% | |
| GAGCTTCATTGCCTTAAGGT+TGG | - | chr5_1:70592448-70592467 | Msa0746960:intron | 45.0% | |
| CCCACTAGCACATATGTAAC+TGG | + | chr5_1:70592577-70592596 | None:intergenic | 45.0% | |
| ! | AGTGTTGAGGCTTCAGTTTC+TGG | - | chr5_1:70592963-70592982 | Msa0746960:intron | 45.0% |
| GCTCTGGCATTTCACTCAAA+TGG | - | chr5_1:70593222-70593241 | Msa0746960:intron | 45.0% | |
| CTGGTGCACAGAACTATTCA+AGG | - | chr5_1:70593412-70593431 | Msa0746960:intron | 45.0% | |
| ATGCCTAGAACGTCTTCGTA+TGG | + | chr5_1:70593492-70593511 | None:intergenic | 45.0% | |
| ! | TACGAAGACGTTCTAGGCAT+AGG | - | chr5_1:70593492-70593511 | Msa0746960:intron | 45.0% |
| AGTATCCTTATTCCAGGAGC+AGG | - | chr5_1:70593534-70593553 | Msa0746960:CDS | 45.0% | |
| GCTAACTGCACAAGAGATAG+AGG | - | chr5_1:70593713-70593732 | Msa0746960:CDS | 45.0% | |
| ACAAGAGATAGAGGCTGAGA+TGG | - | chr5_1:70593722-70593741 | Msa0746960:CDS | 45.0% | |
| ACAAAAGGAAGAAGCAAGGC+TGG | - | chr5_1:70593789-70593808 | Msa0746960:intron | 45.0% | |
| CAAGTAAGGCCTCTTTGCAT+TGG | + | chr5_1:70593847-70593866 | None:intergenic | 45.0% | |
| CAATGCAAAGAGGCCTTACT+TGG | - | chr5_1:70593845-70593864 | Msa0746960:intron | 45.0% | |
| !!! | AAACAATTTTTTTTTTTTTT+TGG | - | chr5_1:70589605-70589624 | Msa0746960:intron | 5.0% |
| ACACAACACAACACAGACGG+AGG | - | chr5_1:70587264-70587283 | Msa0746960:three_prime_UTR | 50.0% | |
| ACAGAGAGAGAGGGAAAGTG+CGG | + | chr5_1:70587334-70587353 | None:intergenic | 50.0% | |
| ! | CTCTTTCTGGTGGAAGACGA+CGG | + | chr5_1:70587360-70587379 | None:intergenic | 50.0% |
| CAGCTGCAATCTCTTTCTGG+TGG | + | chr5_1:70587370-70587389 | None:intergenic | 50.0% | |
| GTGCAGCTGCAATCTCTTTC+TGG | + | chr5_1:70587373-70587392 | None:intergenic | 50.0% | |
| GAAAGAGATTGCAGCTGCAC+CGG | - | chr5_1:70587373-70587392 | Msa0746960:three_prime_UTR | 50.0% | |
| ATCTGCTAAAGCTGCTGCTC+AGG | - | chr5_1:70587919-70587938 | Msa0746960:CDS | 50.0% | |
| TGTGTGTGTGTGTTTCCGTG+TGG | - | chr5_1:70588036-70588055 | Msa0746960:CDS | 50.0% | |
| GTGTGTGTGTGTTTCCGTGT+GGG | - | chr5_1:70588037-70588056 | Msa0746960:CDS | 50.0% | |
| !! | CAGTGGATTATGCCTAGCGA+AGG | - | chr5_1:70588835-70588854 | Msa0746960:intron | 50.0% |
| TGGATTATGCCTAGCGAAGG+AGG | - | chr5_1:70588838-70588857 | Msa0746960:intron | 50.0% | |
| GAGTGCATGAGAGGACATCA+CGG | + | chr5_1:70589830-70589849 | None:intergenic | 50.0% | |
| GGCAGAGGAAAAAAGCTGAC+TGG | + | chr5_1:70590193-70590212 | None:intergenic | 50.0% | |
| !! | AAAGGGGCTCTTTTCAAGGG+AGG | + | chr5_1:70590217-70590236 | None:intergenic | 50.0% |
| CGCAACAAGCAAAGAACCAG+TGG | + | chr5_1:70590263-70590282 | None:intergenic | 50.0% | |
| TGACCTCCAGTACAGTGGTT+TGG | + | chr5_1:70590626-70590645 | None:intergenic | 50.0% | |
| GTATCTGACCTCCAGTACAG+TGG | + | chr5_1:70590631-70590650 | None:intergenic | 50.0% | |
| !! | GCACTTGAACTGGTAGTGGA+GGG | + | chr5_1:70590821-70590840 | None:intergenic | 50.0% |
| !! | AGCACTTGAACTGGTAGTGG+AGG | + | chr5_1:70590822-70590841 | None:intergenic | 50.0% |
| AGTGGCCGGTATATGGCTAT+TGG | - | chr5_1:70591301-70591320 | Msa0746960:intron | 50.0% | |
| GGTAGAACAGCAAACCAGGA+AGG | + | chr5_1:70591854-70591873 | None:intergenic | 50.0% | |
| AAGCCGCGAACAATCTCACA+GGG | + | chr5_1:70592284-70592303 | None:intergenic | 50.0% | |
| ATGCAACCTCCGATGAATGG+TGG | + | chr5_1:70592637-70592656 | None:intergenic | 50.0% | |
| TCAACACTGAACCATGCTCC+TGG | + | chr5_1:70592951-70592970 | None:intergenic | 50.0% | |
| ! | AGGAGCATGGTTCAGTGTTG+AGG | - | chr5_1:70592950-70592969 | Msa0746960:intron | 50.0% |
| GTTTCTTTAGGCCACTCAGC+CGG | - | chr5_1:70593126-70593145 | Msa0746960:intron | 50.0% | |
| !! | TAGTAACTGTACCGGCTGAG+TGG | + | chr5_1:70593140-70593159 | None:intergenic | 50.0% |
| CAGCCGGTACAGTTACTATG+TGG | - | chr5_1:70593142-70593161 | Msa0746960:intron | 50.0% | |
| TGAAATGCCAGAGCTGAGAC+TGG | + | chr5_1:70593216-70593235 | None:intergenic | 50.0% | |
| ! | CAAAAAGGCTTGCTTGCGTG+TGG | - | chr5_1:70593354-70593373 | Msa0746960:intron | 50.0% |
| CAGAAACATCCCTCAGAACC+TGG | + | chr5_1:70593395-70593414 | None:intergenic | 50.0% | |
| !! | CAGGTTCTGAGGGATGTTTC+TGG | - | chr5_1:70593393-70593412 | Msa0746960:intron | 50.0% |
| CGACCATACGAAGACGTTCT+AGG | - | chr5_1:70593486-70593505 | Msa0746960:intron | 50.0% | |
| GTTCTCCTGCTCCTGGAATA+AGG | + | chr5_1:70593542-70593561 | None:intergenic | 50.0% | |
| TCCACCTGAGACAATCATGC+TGG | - | chr5_1:70593647-70593666 | Msa0746960:intron | 50.0% | |
| TCCAGCATGATTGTCTCAGG+TGG | + | chr5_1:70593651-70593670 | None:intergenic | 50.0% | |
| GGATCCAGCATGATTGTCTC+AGG | + | chr5_1:70593654-70593673 | None:intergenic | 50.0% | |
| ATGCTGGATCCCAGCAAGAT+CGG | - | chr5_1:70593663-70593682 | Msa0746960:intron | 50.0% | |
| GTGCGGCGGTGAAGAAGAAA+GGG | + | chr5_1:70587317-70587336 | None:intergenic | 55.0% | |
| AGTGCGGCGGTGAAGAAGAA+AGG | + | chr5_1:70587318-70587337 | None:intergenic | 55.0% | |
| AGCAAACATCGAGCTTGGCC+CGG | + | chr5_1:70588153-70588172 | None:intergenic | 55.0% | |
| GTGCCAGCAAACATCGAGCT+TGG | + | chr5_1:70588158-70588177 | None:intergenic | 55.0% | |
| !! | CTTTTCAAGGGAGGAGGCAG+AGG | + | chr5_1:70590208-70590227 | None:intergenic | 55.0% |
| TACTTCTAGCAGGAGCTGGG+AGG | + | chr5_1:70590408-70590427 | None:intergenic | 55.0% | |
| GGCCGGTATATGGCTATTGG+TGG | - | chr5_1:70591304-70591323 | Msa0746960:intron | 55.0% | |
| GTACCTGAAGCTCCCTGATC+AGG | + | chr5_1:70591372-70591391 | None:intergenic | 55.0% | |
| CAAGCCGCGAACAATCTCAC+AGG | + | chr5_1:70592285-70592304 | None:intergenic | 55.0% | |
| GTGCCCACTAGTGGAACACT+CGG | - | chr5_1:70592763-70592782 | Msa0746960:intron | 55.0% | |
| GAGCCGAGTGTTCCACTAGT+GGG | + | chr5_1:70592769-70592788 | None:intergenic | 55.0% | |
| TGAGCCGAGTGTTCCACTAG+TGG | + | chr5_1:70592770-70592789 | None:intergenic | 55.0% | |
| ACAAGGGGAGACGAACTGGT+TGG | + | chr5_1:70593171-70593190 | None:intergenic | 55.0% | |
| CTTGACAAGGGGAGACGAAC+TGG | + | chr5_1:70593175-70593194 | None:intergenic | 55.0% | |
| GGCCACTTAATGGCTACTGC+CGG | - | chr5_1:70593243-70593262 | Msa0746960:intron | 55.0% | |
| GCCACTTAATGGCTACTGCC+GGG | - | chr5_1:70593244-70593263 | Msa0746960:intron | 55.0% | |
| CCACTTAATGGCTACTGCCG+GGG | - | chr5_1:70593245-70593264 | Msa0746960:intron | 55.0% | |
| ! | GGCTTGCTTGCGTGTGGTAA+TGG | - | chr5_1:70593360-70593379 | Msa0746960:intron | 55.0% |
| AAGTTGGGTTCTCCTGCTCC+TGG | + | chr5_1:70593549-70593568 | None:intergenic | 55.0% | |
| GGATCCCAGCAAGATCGGTA+CGG | - | chr5_1:70593668-70593687 | Msa0746960:intron | 55.0% | |
| ! | CTCACCGTACCGATCTTGCT+GGG | + | chr5_1:70593675-70593694 | None:intergenic | 55.0% |
| ! | TCTCACCGTACCGATCTTGC+TGG | + | chr5_1:70593676-70593695 | None:intergenic | 55.0% |
| AGCTGCTGTGGAAGCTGTCA+AGG | - | chr5_1:70593746-70593765 | Msa0746960:CDS | 55.0% | |
| GCTGCTGTGGAAGCTGTCAA+GGG | - | chr5_1:70593747-70593766 | Msa0746960:CDS | 55.0% | |
| ! | GAGAGAGAGGGAAAGTGCGG+CGG | + | chr5_1:70587331-70587350 | None:intergenic | 60.0% |
| CGACGGTGCACAGAGAGAGA+GGG | + | chr5_1:70587343-70587362 | None:intergenic | 60.0% | |
| ACGACGGTGCACAGAGAGAG+AGG | + | chr5_1:70587344-70587363 | None:intergenic | 60.0% | |
| AGCTGCTGCTCAGGCTGAGA+AGG | - | chr5_1:70587928-70587947 | Msa0746960:CDS | 60.0% | |
| GGGCCAAGCTCGATGTTTGC+TGG | - | chr5_1:70588152-70588171 | Msa0746960:CDS | 60.0% | |
| !! | GGGGCTCTTTTCAAGGGAGG+AGG | + | chr5_1:70590214-70590233 | None:intergenic | 60.0% |
| TCAACCACTCACCGAAGCGC+TGG | + | chr5_1:70590302-70590321 | None:intergenic | 60.0% | |
| GGAGGCCAATGTCTGAGCAC+TGG | + | chr5_1:70590390-70590409 | None:intergenic | 60.0% | |
| GAGCCTGATCAGGGAGCTTC+AGG | - | chr5_1:70591366-70591385 | Msa0746960:intron | 60.0% | |
| !! | GCTTGAGGAGTGCCCACTAG+TGG | - | chr5_1:70592754-70592773 | Msa0746960:intron | 60.0% |
| TCAAGGGCCAGTCTCAGCTC+TGG | - | chr5_1:70593206-70593225 | Msa0746960:intron | 60.0% | |
| CCCCGGCAGTAGCCATTAAG+TGG | + | chr5_1:70593248-70593267 | None:intergenic | 60.0% | |
| GGCTGAGATGGAAGCTGCTG+TGG | - | chr5_1:70593734-70593753 | Msa0746960:CDS | 60.0% | |
| ! | GCAGCTGCACCGGTGCAAGA+TGG | - | chr5_1:70587383-70587402 | Msa0746960:three_prime_UTR | 65.0% |
| TCTGCCAGCGCTTCGGTGAG+TGG | - | chr5_1:70590295-70590314 | Msa0746960:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 70587242 | 70594226 | 70587242 | ID=Msa0746960;Name=Msa0746960 |
| chr5_1 | mRNA | 70587242 | 70594226 | 70587242 | ID=Msa0746960-mRNA-1;Parent=Msa0746960;Name=Msa0746960-mRNA-1;_AED=0.01;_eAED=0.01;_QI=160|1|1|1|1|1|8|246|536 |
| chr5_1 | exon | 70587242 | 70588516 | 70587242 | ID=Msa0746960-mRNA-1:exon:20823;Parent=Msa0746960-mRNA-1 |
| chr5_1 | exon | 70589003 | 70589051 | 70589003 | ID=Msa0746960-mRNA-1:exon:20822;Parent=Msa0746960-mRNA-1 |
| chr5_1 | exon | 70589627 | 70589694 | 70589627 | ID=Msa0746960-mRNA-1:exon:20821;Parent=Msa0746960-mRNA-1 |
| chr5_1 | exon | 70590081 | 70590199 | 70590081 | ID=Msa0746960-mRNA-1:exon:20820;Parent=Msa0746960-mRNA-1 |
| chr5_1 | exon | 70592498 | 70592630 | 70592498 | ID=Msa0746960-mRNA-1:exon:20819;Parent=Msa0746960-mRNA-1 |
| chr5_1 | exon | 70593519 | 70593608 | 70593519 | ID=Msa0746960-mRNA-1:exon:20818;Parent=Msa0746960-mRNA-1 |
| chr5_1 | exon | 70593713 | 70593778 | 70593713 | ID=Msa0746960-mRNA-1:exon:20817;Parent=Msa0746960-mRNA-1 |
| chr5_1 | exon | 70594010 | 70594226 | 70594010 | ID=Msa0746960-mRNA-1:exon:20816;Parent=Msa0746960-mRNA-1 |
| chr5_1 | five_prime_UTR | 70594067 | 70594226 | 70594067 | ID=Msa0746960-mRNA-1:five_prime_utr;Parent=Msa0746960-mRNA-1 |
| chr5_1 | CDS | 70594010 | 70594066 | 70594010 | ID=Msa0746960-mRNA-1:cds;Parent=Msa0746960-mRNA-1 |
| chr5_1 | CDS | 70593713 | 70593778 | 70593713 | ID=Msa0746960-mRNA-1:cds;Parent=Msa0746960-mRNA-1 |
| chr5_1 | CDS | 70593519 | 70593608 | 70593519 | ID=Msa0746960-mRNA-1:cds;Parent=Msa0746960-mRNA-1 |
| chr5_1 | CDS | 70592498 | 70592630 | 70592498 | ID=Msa0746960-mRNA-1:cds;Parent=Msa0746960-mRNA-1 |
| chr5_1 | CDS | 70590081 | 70590199 | 70590081 | ID=Msa0746960-mRNA-1:cds;Parent=Msa0746960-mRNA-1 |
| chr5_1 | CDS | 70589627 | 70589694 | 70589627 | ID=Msa0746960-mRNA-1:cds;Parent=Msa0746960-mRNA-1 |
| chr5_1 | CDS | 70589003 | 70589051 | 70589003 | ID=Msa0746960-mRNA-1:cds;Parent=Msa0746960-mRNA-1 |
| chr5_1 | CDS | 70587488 | 70588516 | 70587488 | ID=Msa0746960-mRNA-1:cds;Parent=Msa0746960-mRNA-1 |
| chr5_1 | three_prime_UTR | 70587242 | 70587487 | 70587242 | ID=Msa0746960-mRNA-1:three_prime_utr;Parent=Msa0746960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
