Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230520 | XP_003591158.1 | 99.200 | 125 | 1 | 0 | 1 | 125 | 1 | 125 | 2.51e-84 | 252 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230520 | sp|Q9M9W1|RL222_ARATH | 84.800 | 125 | 18 | 1 | 1 | 125 | 1 | 124 | 3.80e-62 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230520 | G7I8Q9 | 99.200 | 125 | 1 | 0 | 1 | 125 | 1 | 125 | 1.20e-84 | 252 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002790 | Msa0230520 | 0.803837 | 2.881420e-49 | -8.615850e-47 |
| Msa0007850 | Msa0230520 | 0.816951 | 4.242481e-52 | -8.615850e-47 |
| Msa0022970 | Msa0230520 | 0.804412 | 2.187676e-49 | -8.615850e-47 |
| Msa0032810 | Msa0230520 | 0.887473 | 1.383136e-72 | -8.615850e-47 |
| Msa0033880 | Msa0230520 | 0.809829 | 1.559696e-50 | -8.615850e-47 |
| Msa0042280 | Msa0230520 | 0.807723 | 4.396487e-50 | -8.615850e-47 |
| Msa0045730 | Msa0230520 | 0.834173 | 3.492524e-56 | -8.615850e-47 |
| Msa0047160 | Msa0230520 | 0.829465 | 5.069731e-55 | -8.615850e-47 |
| Msa0048180 | Msa0230520 | 0.866914 | 2.011810e-65 | -8.615850e-47 |
| Msa0057610 | Msa0230520 | 0.835822 | 1.341145e-56 | -8.615850e-47 |
| Msa0068020 | Msa0230520 | 0.821713 | 3.488373e-53 | -8.615850e-47 |
| Msa0078360 | Msa0230520 | 0.805608 | 1.229590e-49 | -8.615850e-47 |
| Msa0094470 | Msa0230520 | 0.809640 | 1.712413e-50 | -8.615850e-47 |
| Msa0103240 | Msa0230520 | 0.828387 | 9.250249e-55 | -8.615850e-47 |
| Msa0113130 | Msa0230520 | 0.808935 | 2.425279e-50 | -8.615850e-47 |
| Msa0113240 | Msa0230520 | 0.832075 | 1.162530e-55 | -8.615850e-47 |
| Msa0116130 | Msa0230520 | 0.848627 | 5.434110e-60 | -8.615850e-47 |
| Msa0116670 | Msa0230520 | 0.828915 | 6.893637e-55 | -8.615850e-47 |
| Msa0118710 | Msa0230520 | 0.831377 | 1.728346e-55 | -8.615850e-47 |
| Msa0126840 | Msa0230520 | 0.806504 | 7.967951e-50 | -8.615850e-47 |
| Msa0127850 | Msa0230520 | 0.801575 | 8.441422e-49 | -8.615850e-47 |
| Msa0128860 | Msa0230520 | 0.813596 | 2.362952e-51 | -8.615850e-47 |
| Msa0133540 | Msa0230520 | 0.853486 | 2.315332e-61 | -8.615850e-47 |
| Msa0138890 | Msa0230520 | 0.807796 | 4.243419e-50 | -8.615850e-47 |
| Msa0142410 | Msa0230520 | 0.810745 | 9.891489e-51 | -8.615850e-47 |
| Msa0163760 | Msa0230520 | 0.824609 | 7.357390e-54 | -8.615850e-47 |
| Msa0166750 | Msa0230520 | 0.801728 | 7.850498e-49 | -8.615850e-47 |
| Msa0167480 | Msa0230520 | 0.845454 | 4.021909e-59 | -8.615850e-47 |
| Msa0172930 | Msa0230520 | 0.849347 | 3.427612e-60 | -8.615850e-47 |
| Msa0173530 | Msa0230520 | 0.828233 | 1.007421e-54 | -8.615850e-47 |
| Msa0174730 | Msa0230520 | 0.811664 | 6.251597e-51 | -8.615850e-47 |
| Msa0177960 | Msa0230520 | 0.866261 | 3.244627e-65 | -8.615850e-47 |
| Msa0178950 | Msa0230520 | 0.801172 | 1.020487e-48 | -8.615850e-47 |
| Msa0179030 | Msa0230520 | 0.830658 | 2.593818e-55 | -8.615850e-47 |
| Msa0180020 | Msa0230520 | 0.807166 | 5.772660e-50 | -8.615850e-47 |
| Msa0181490 | Msa0230520 | 0.852276 | 5.133480e-61 | -8.615850e-47 |
| Msa0181610 | Msa0230520 | 0.803842 | 2.873959e-49 | -8.615850e-47 |
| Msa0188350 | Msa0230520 | 0.829424 | 5.187809e-55 | -8.615850e-47 |
| Msa0191080 | Msa0230520 | 0.803426 | 3.505611e-49 | -8.615850e-47 |
| Msa0207700 | Msa0230520 | 0.801672 | 8.063546e-49 | -8.615850e-47 |
| Msa0218720 | Msa0230520 | 0.848884 | 4.609947e-60 | -8.615850e-47 |
| Msa0218830 | Msa0230520 | 0.860079 | 2.651881e-63 | -8.615850e-47 |
| Msa0219120 | Msa0230520 | 0.843702 | 1.191313e-58 | -8.615850e-47 |
| Msa0221030 | Msa0230520 | 0.837344 | 5.494407e-57 | -8.615850e-47 |
| Msa0224560 | Msa0230520 | 0.827935 | 1.188347e-54 | -8.615850e-47 |
| Msa0226460 | Msa0230520 | 0.816893 | 4.373405e-52 | -8.615850e-47 |
| Msa0230490 | Msa0230520 | 0.843463 | 1.379822e-58 | -8.615850e-47 |
| Msa0230520 | Msa0231100 | 0.853478 | 2.327897e-61 | -8.615850e-47 |
| Msa0230520 | Msa0241830 | 0.832683 | 8.217469e-56 | -8.615850e-47 |
| Msa0230520 | Msa0245060 | 0.819958 | 8.833066e-53 | -8.615850e-47 |
| Msa0230520 | Msa0245580 | 0.832377 | 9.786215e-56 | -8.615850e-47 |
| Msa0230520 | Msa0254940 | 0.805116 | 1.559282e-49 | -8.615850e-47 |
| Msa0230520 | Msa0257490 | 0.812693 | 3.728349e-51 | -8.615850e-47 |
| Msa0230520 | Msa0258850 | 0.832348 | 9.952782e-56 | -8.615850e-47 |
| Msa0230520 | Msa0262480 | 0.854826 | 9.503847e-62 | -8.615850e-47 |
| Msa0230520 | Msa0275360 | 0.819746 | 9.879762e-53 | -8.615850e-47 |
| Msa0230520 | Msa0280370 | 0.832007 | 1.208402e-55 | -8.615850e-47 |
| Msa0230520 | Msa0281530 | 0.831531 | 1.583618e-55 | -8.615850e-47 |
| Msa0230520 | Msa0296250 | 0.886987 | 2.118066e-72 | -8.615850e-47 |
| Msa0230520 | Msa0296790 | 0.829030 | 6.464510e-55 | -8.615850e-47 |
| Msa0230520 | Msa0298200 | 0.833130 | 6.362280e-56 | -8.615850e-47 |
| Msa0230520 | Msa0300350 | 0.845889 | 3.063488e-59 | -8.615850e-47 |
| Msa0230520 | Msa0304590 | 0.821411 | 4.095575e-53 | -8.615850e-47 |
| Msa0230520 | Msa0304660 | 0.831012 | 2.124393e-55 | -8.615850e-47 |
| Msa0230520 | Msa0305780 | 0.829060 | 6.356393e-55 | -8.615850e-47 |
| Msa0230520 | Msa0306690 | 0.876860 | 9.977458e-69 | -8.615850e-47 |
| Msa0230520 | Msa0310080 | 0.832105 | 1.143109e-55 | -8.615850e-47 |
| Msa0230520 | Msa0317910 | 0.846697 | 1.845249e-59 | -8.615850e-47 |
| Msa0230520 | Msa0320590 | 0.855645 | 5.489752e-62 | -8.615850e-47 |
| Msa0230520 | Msa0331700 | 0.832564 | 8.795568e-56 | -8.615850e-47 |
| Msa0230520 | Msa0332640 | 0.863083 | 3.205010e-64 | -8.615850e-47 |
| Msa0230520 | Msa0348830 | 0.889791 | 1.765130e-73 | -8.615850e-47 |
| Msa0230520 | Msa0358770 | 0.809737 | 1.632349e-50 | -8.615850e-47 |
| Msa0230520 | Msa0359040 | 0.807567 | 4.745393e-50 | -8.615850e-47 |
| Msa0230520 | Msa0371500 | 0.808144 | 3.577824e-50 | -8.615850e-47 |
| Msa0230520 | Msa0376820 | 0.803631 | 3.179468e-49 | -8.615850e-47 |
| Msa0230520 | Msa0384880 | 0.812946 | 3.281545e-51 | -8.615850e-47 |
| Msa0230520 | Msa0385500 | 0.820491 | 6.669198e-53 | -8.615850e-47 |
| Msa0230520 | Msa0419720 | 0.808523 | 2.970051e-50 | -8.615850e-47 |
| Msa0230520 | Msa0423750 | 0.856293 | 3.548066e-62 | -8.615850e-47 |
| Msa0230520 | Msa0426580 | 0.800260 | 1.566303e-48 | -8.615850e-47 |
| Msa0230520 | Msa0437020 | 0.832396 | 9.684818e-56 | -8.615850e-47 |
| Msa0230520 | Msa0443390 | 0.890153 | 1.274293e-73 | -8.615850e-47 |
| Msa0230520 | Msa0456430 | 0.807417 | 5.107476e-50 | -8.615850e-47 |
| Msa0230520 | Msa0458370 | -0.801774 | 7.681784e-49 | -8.615850e-47 |
| Msa0230520 | Msa0472130 | 0.800800 | 1.216208e-48 | -8.615850e-47 |
| Msa0230520 | Msa0474090 | -0.803867 | 2.840059e-49 | -8.615850e-47 |
| Msa0230520 | Msa0511770 | 0.820820 | 5.603520e-53 | -8.615850e-47 |
| Msa0230520 | Msa0526540 | 0.817679 | 2.909330e-52 | -8.615850e-47 |
| Msa0230520 | Msa0527020 | 0.821718 | 3.477861e-53 | -8.615850e-47 |
| Msa0230520 | Msa0527150 | 0.848343 | 6.510770e-60 | -8.615850e-47 |
| Msa0230520 | Msa0531650 | 0.815722 | 7.991070e-52 | -8.615850e-47 |
| Msa0230520 | Msa0534750 | 0.887441 | 1.422714e-72 | -8.615850e-47 |
| Msa0230520 | Msa0547990 | 0.802993 | 4.309828e-49 | -8.615850e-47 |
| Msa0230520 | Msa0550540 | 0.800246 | 1.576970e-48 | -8.615850e-47 |
| Msa0230520 | Msa0550570 | 0.817943 | 2.536973e-52 | -8.615850e-47 |
| Msa0230520 | Msa0571920 | 0.805533 | 1.275309e-49 | -8.615850e-47 |
| Msa0230520 | Msa0576940 | 0.810653 | 1.035806e-50 | -8.615850e-47 |
| Msa0230520 | Msa0581110 | 0.826077 | 3.305449e-54 | -8.615850e-47 |
| Msa0230520 | Msa0581280 | 0.804148 | 2.482465e-49 | -8.615850e-47 |
| Msa0230520 | Msa0584260 | 0.837215 | 5.926556e-57 | -8.615850e-47 |
| Msa0230520 | Msa0586420 | 0.827287 | 1.700196e-54 | -8.615850e-47 |
| Msa0230520 | Msa0588630 | -0.845466 | 3.992008e-59 | -8.615850e-47 |
| Msa0230520 | Msa0590940 | 0.820760 | 5.785080e-53 | -8.615850e-47 |
| Msa0230520 | Msa0593700 | 0.847916 | 8.539809e-60 | -8.615850e-47 |
| Msa0230520 | Msa0603570 | 0.816103 | 6.570476e-52 | -8.615850e-47 |
| Msa0230520 | Msa0609000 | 0.804539 | 2.058083e-49 | -8.615850e-47 |
| Msa0230520 | Msa0610550 | 0.827475 | 1.532962e-54 | -8.615850e-47 |
| Msa0230520 | Msa0615580 | 0.900465 | 7.127608e-78 | -8.615850e-47 |
| Msa0230520 | Msa0619860 | 0.814368 | 1.596293e-51 | -8.615850e-47 |
| Msa0230520 | Msa0623200 | 0.847653 | 1.009121e-59 | -8.615850e-47 |
| Msa0230520 | Msa0631250 | 0.844843 | 5.882012e-59 | -8.615850e-47 |
| Msa0230520 | Msa0633570 | 0.852301 | 5.049438e-61 | -8.615850e-47 |
| Msa0230520 | Msa0644030 | 0.818815 | 1.609929e-52 | -8.615850e-47 |
| Msa0230520 | Msa0656810 | 0.801356 | 9.360959e-49 | -8.615850e-47 |
| Msa0230520 | Msa0666230 | 0.906428 | 1.500210e-80 | -8.615850e-47 |
| Msa0230520 | Msa0672100 | 0.834805 | 2.423788e-56 | -8.615850e-47 |
| Msa0230520 | Msa0683780 | 0.812928 | 3.311925e-51 | -8.615850e-47 |
| Msa0230520 | Msa0693210 | 0.835587 | 1.538563e-56 | -8.615850e-47 |
| Msa0230520 | Msa0694990 | 0.804898 | 1.731376e-49 | -8.615850e-47 |
| Msa0230520 | Msa0698780 | 0.840728 | 7.300319e-58 | -8.615850e-47 |
| Msa0230520 | Msa0699190 | 0.822358 | 2.471913e-53 | -8.615850e-47 |
| Msa0230520 | Msa0706500 | 0.845840 | 3.160316e-59 | -8.615850e-47 |
| Msa0230520 | Msa0729200 | 0.849170 | 3.839264e-60 | -8.615850e-47 |
| Msa0230520 | Msa0738100 | 0.821975 | 3.032804e-53 | -8.615850e-47 |
| Msa0230520 | Msa0746960 | 0.814232 | 1.710673e-51 | -8.615850e-47 |
| Msa0230520 | Msa0751010 | 0.817828 | 2.693130e-52 | -8.615850e-47 |
| Msa0230520 | Msa0766080 | 0.880623 | 4.714221e-70 | -8.615850e-47 |
| Msa0230520 | Msa0769590 | 0.853865 | 1.801384e-61 | -8.615850e-47 |
| Msa0230520 | Msa0780930 | 0.807854 | 4.123494e-50 | -8.615850e-47 |
| Msa0230520 | Msa0781080 | 0.827349 | 1.642782e-54 | -8.615850e-47 |
| Msa0230520 | Msa0785130 | 0.869550 | 2.846692e-66 | -8.615850e-47 |
| Msa0230520 | Msa0794050 | 0.818173 | 2.250443e-52 | -8.615850e-47 |
| Msa0230520 | Msa0806880 | 0.861495 | 9.854579e-64 | -8.615850e-47 |
| Msa0230520 | Msa0808800 | 0.838920 | 2.158587e-57 | -8.615850e-47 |
| Msa0230520 | Msa0817540 | 0.848418 | 6.206414e-60 | -8.615850e-47 |
| Msa0230520 | Msa0818770 | 0.823984 | 1.032071e-53 | -8.615850e-47 |
| Msa0230520 | Msa0827380 | 0.834064 | 3.720429e-56 | -8.615850e-47 |
| Msa0230520 | Msa0833190 | -0.810460 | 1.140017e-50 | -8.615850e-47 |
| Msa0230520 | Msa0845550 | 0.850383 | 1.759100e-60 | -8.615850e-47 |
| Msa0230520 | Msa0858440 | 0.802963 | 4.370966e-49 | -8.615850e-47 |
| Msa0230520 | Msa0876170 | 0.807038 | 6.143061e-50 | -8.615850e-47 |
| Msa0230520 | Msa0888810 | 0.801352 | 9.377651e-49 | -8.615850e-47 |
| Msa0230520 | Msa0913240 | 0.845644 | 3.571790e-59 | -8.615850e-47 |
| Msa0230520 | Msa0943170 | 0.802792 | 4.741989e-49 | -8.615850e-47 |
| Msa0230520 | Msa0944200 | 0.810552 | 1.089064e-50 | -8.615850e-47 |
| Msa0230520 | Msa0945480 | 0.860636 | 1.798641e-63 | -8.615850e-47 |
| Msa0230520 | Msa0960830 | 0.825002 | 5.943732e-54 | -8.615850e-47 |
| Msa0230520 | Msa0963020 | 0.836691 | 8.066568e-57 | -8.615850e-47 |
| Msa0230520 | Msa0992550 | 0.840744 | 7.228549e-58 | -8.615850e-47 |
| Msa0230520 | Msa1006840 | 0.805800 | 1.120549e-49 | -8.615850e-47 |
| Msa0230520 | Msa1019240 | 0.852816 | 3.600367e-61 | -8.615850e-47 |
| Msa0230520 | Msa1019260 | 0.848627 | 5.431927e-60 | -8.615850e-47 |
| Msa0230520 | Msa1039520 | 0.807897 | 4.039178e-50 | -8.615850e-47 |
| Msa0230520 | Msa1039900 | 0.816774 | 4.650224e-52 | -8.615850e-47 |
| Msa0230520 | Msa1048690 | 0.808560 | 2.916432e-50 | -8.615850e-47 |
| Msa0230520 | Msa1072710 | 0.861442 | 1.023230e-63 | -8.615850e-47 |
| Msa0230520 | Msa1104210 | 0.847842 | 8.952146e-60 | -8.615850e-47 |
| Msa0230520 | Msa1122310 | -0.803762 | 2.986545e-49 | -8.615850e-47 |
| Msa0230520 | Msa1122820 | 0.802104 | 6.571484e-49 | -8.615850e-47 |
| Msa0230520 | Msa1123350 | 0.807648 | 4.560622e-50 | -8.615850e-47 |
| Msa0230520 | Msa1123770 | 0.809392 | 1.935522e-50 | -8.615850e-47 |
| Msa0230520 | Msa1126830 | 0.829951 | 3.861766e-55 | -8.615850e-47 |
| Msa0230520 | Msa1127590 | 0.814209 | 1.731063e-51 | -8.615850e-47 |
| Msa0230520 | Msa1131560 | 0.853324 | 2.576652e-61 | -8.615850e-47 |
| Msa0230520 | Msa1135890 | 0.808980 | 2.371691e-50 | -8.615850e-47 |
| Msa0230520 | Msa1165780 | 0.868118 | 8.278627e-66 | -8.615850e-47 |
| Msa0230520 | Msa1166870 | 0.866893 | 2.043918e-65 | -8.615850e-47 |
| Msa0230520 | Msa1175350 | 0.872374 | 3.339256e-67 | -8.615850e-47 |
| Msa0230520 | Msa1179950 | 0.827072 | 1.914018e-54 | -8.615850e-47 |
| Msa0230520 | Msa1179980 | 0.844889 | 5.716620e-59 | -8.615850e-47 |
| Msa0230520 | Msa1195300 | 0.856979 | 2.229339e-62 | -8.615850e-47 |
| Msa0230520 | Msa1202580 | 0.849059 | 4.123188e-60 | -8.615850e-47 |
| Msa0230520 | Msa1208020 | 0.879526 | 1.159748e-69 | -8.615850e-47 |
| Msa0230520 | Msa1211830 | 0.809829 | 1.559696e-50 | -8.615850e-47 |
| Msa0230520 | Msa1227690 | 0.813595 | 2.364013e-51 | -8.615850e-47 |
| Msa0230520 | Msa1230580 | 0.840155 | 1.030727e-57 | -8.615850e-47 |
| Msa0230520 | Msa1235610 | 0.801104 | 1.054061e-48 | -8.615850e-47 |
| Msa0230520 | Msa1241190 | 0.804072 | 2.575035e-49 | -8.615850e-47 |
| Msa0230520 | Msa1256770 | 0.803278 | 3.762218e-49 | -8.615850e-47 |
| Msa0230520 | Msa1256950 | 0.804857 | 1.766349e-49 | -8.615850e-47 |
| Msa0230520 | Msa1262890 | 0.854005 | 1.641836e-61 | -8.615850e-47 |
| Msa0230520 | Msa1264210 | 0.816969 | 4.203977e-52 | -8.615850e-47 |
| Msa0230520 | Msa1265630 | 0.830433 | 2.944667e-55 | -8.615850e-47 |
| Msa0230520 | Msa1270620 | 0.850037 | 2.199217e-60 | -8.615850e-47 |
| Msa0230520 | Msa1270690 | 0.847333 | 1.236049e-59 | -8.615850e-47 |
| Msa0230520 | Msa1271580 | 0.814186 | 1.751693e-51 | -8.615850e-47 |
| Msa0230520 | Msa1275680 | 0.800103 | 1.686165e-48 | -8.615850e-47 |
| Msa0230520 | Msa1277260 | 0.824073 | 9.833905e-54 | -8.615850e-47 |
| Msa0230520 | Msa1306990 | 0.822626 | 2.142155e-53 | -8.615850e-47 |
| Msa0230520 | Msa1315890 | 0.855104 | 7.893535e-62 | -8.615850e-47 |
| Msa0230520 | Msa1329300 | 0.803376 | 3.589813e-49 | -8.615850e-47 |
| Msa0230520 | Msa1329540 | 0.822612 | 2.158107e-53 | -8.615850e-47 |
| Msa0230520 | Msa1331250 | 0.874751 | 5.288388e-68 | -8.615850e-47 |
| Msa0230520 | Msa1331710 | 0.827442 | 1.560961e-54 | -8.615850e-47 |
| Msa0230520 | Msa1340980 | 0.841201 | 5.485434e-58 | -8.615850e-47 |
| Msa0230520 | Msa1349570 | 0.874562 | 6.128931e-68 | -8.615850e-47 |
| Msa0230520 | Msa1351540 | 0.840666 | 7.578892e-58 | -8.615850e-47 |
| Msa0230520 | Msa1362790 | 0.823734 | 1.180766e-53 | -8.615850e-47 |
| Msa0230520 | Msa1363330 | 0.812443 | 4.229804e-51 | -8.615850e-47 |
| Msa0230520 | Msa1369190 | 0.877997 | 4.008408e-69 | -8.615850e-47 |
| Msa0230520 | Msa1379760 | 0.816578 | 5.144891e-52 | -8.615850e-47 |
| Msa0230520 | Msa1385720 | 0.805429 | 1.340925e-49 | -8.615850e-47 |
| Msa0230520 | Msa1386600 | 0.813118 | 3.009679e-51 | -8.615850e-47 |
| Msa0230520 | Msa1387410 | 0.801634 | 8.208741e-49 | -8.615850e-47 |
| Msa0230520 | Msa1391480 | 0.811085 | 8.351643e-51 | -8.615850e-47 |
| Msa0230520 | Msa1398790 | 0.811443 | 6.982813e-51 | -8.615850e-47 |
| Msa0230520 | Msa1406080 | 0.837331 | 5.537410e-57 | -8.615850e-47 |
| Msa0230520 | Msa1413500 | 0.854097 | 1.543964e-61 | -8.615850e-47 |
| Msa0230520 | Msa1425670 | 0.803699 | 3.076882e-49 | -8.615850e-47 |
| Msa0230520 | Msa1426370 | 0.847972 | 8.244581e-60 | -8.615850e-47 |
| Msa0230520 | Msa1426490 | 0.833636 | 4.759200e-56 | -8.615850e-47 |
| Msa0230520 | Msa1427560 | 0.809941 | 1.474970e-50 | -8.615850e-47 |
| Msa0230520 | Msa1434090 | 0.806049 | 9.934221e-50 | -8.615850e-47 |
| Msa0230520 | Msa1450280 | 0.828939 | 6.803121e-55 | -8.615850e-47 |
| Msa0230520 | Msa1454680 | 0.811513 | 6.742878e-51 | -8.615850e-47 |
| Msa0230520 | Msa1456050 | 0.813409 | 2.597991e-51 | -8.615850e-47 |
| Msa0230520 | Msa1459960 | 0.804639 | 1.961616e-49 | -8.615850e-47 |
| Msa0230520 | Msa1462860 | 0.837030 | 6.611397e-57 | -8.615850e-47 |
| Msa0230520 | Msa1465260 | 0.813107 | 3.025998e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230520 | MtrunA17_Chr1g0195471 | 91.597 | 119 | 9 | 1 | 7 | 125 | 2 | 119 | 2.23e-65 | 194 |
| Msa0230520 | MtrunA17_Chr7g0272321 | 94.444 | 108 | 6 | 0 | 18 | 125 | 17 | 124 | 4.39e-62 | 186 |
| Msa0230520 | MtrunA17_Chr1g0192241 | 98.305 | 59 | 1 | 0 | 67 | 125 | 18 | 76 | 2.61e-26 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230520 | AT3G05560.1 | 84.800 | 125 | 18 | 1 | 1 | 125 | 1 | 124 | 3.87e-63 | 188 |
| Msa0230520 | AT3G05560.3 | 84.800 | 125 | 18 | 1 | 1 | 125 | 1 | 124 | 3.87e-63 | 188 |
| Msa0230520 | AT3G05560.2 | 84.800 | 125 | 18 | 1 | 1 | 125 | 1 | 124 | 3.87e-63 | 188 |
| Msa0230520 | AT5G27770.1 | 84.694 | 98 | 15 | 0 | 17 | 114 | 16 | 113 | 3.97e-49 | 153 |
| Msa0230520 | AT1G02830.1 | 69.492 | 118 | 33 | 2 | 1 | 116 | 1 | 117 | 8.11e-43 | 137 |
Find 37 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCGCCTTCTATACTCTTTC+TGG | 0.191248 | 2_2:-2711501 | Msa0230520:three_prime_UTR |
| GTGATGCTGTTACTGTTTCT+AGG | 0.314944 | 2_2:-2712819 | Msa0230520:CDS |
| TCTTATGTTAGCTTCTCTTT+TGG | 0.316391 | 2_2:-2711649 | Msa0230520:three_prime_UTR |
| GATCTTGTCTTCCACGGGTT+TGG | 0.336765 | 2_2:+2712912 | None:intergenic |
| GAGAAGCTAACATAAGAAAA+TGG | 0.346112 | 2_2:+2711655 | None:intergenic |
| GTTTCTTCAAGAGAGGATTA+AGG | 0.367162 | 2_2:-2712866 | Msa0230520:CDS |
| TTCTGTTCTCTTGTGGCTAA+AGG | 0.373476 | 2_2:-2713108 | Msa0230520:intron |
| GTTACCAGAAAGAGTATAGA+AGG | 0.386657 | 2_2:+2711497 | None:intergenic |
| ACTTGAAGAAACACAATGTA+AGG | 0.413403 | 2_2:-2711812 | Msa0230520:CDS |
| CACGGGTTTGGCACAGTCAA+TGG | 0.421170 | 2_2:+2712924 | None:intergenic |
| GGTGGTAAACCTGGTGCTCT+TGG | 0.432206 | 2_2:-2712841 | Msa0230520:CDS |
| GTCCATGATCTTGTCTTCCA+CGG | 0.443029 | 2_2:+2712906 | None:intergenic |
| ATGCTCGAGACATGTTGCTT+TGG | 0.463943 | 2_2:-2711619 | Msa0230520:three_prime_UTR |
| AAAATAATCTTAGACATTCA+AGG | 0.465501 | 2_2:+2711469 | None:intergenic |
| TGTTCTGTTCTGTTCTCTTG+TGG | 0.495042 | 2_2:-2713115 | Msa0230520:five_prime_UTR |
| ATTAAGGTTGGTGGTAAACC+TGG | 0.503896 | 2_2:-2712850 | Msa0230520:CDS |
| GTAGATGCAGCTGGTTCAAA+GGG | 0.506848 | 2_2:-2712973 | Msa0230520:CDS |
| TGGTTCAAAGGGAAAGAAGA+AGG | 0.510234 | 2_2:-2712962 | Msa0230520:CDS |
| TGATGCTGTTACTGTTTCTA+GGG | 0.512151 | 2_2:-2712818 | Msa0230520:CDS |
| CTGATAGCAACTTCTCCAAA+CGG | 0.520527 | 2_2:-2712771 | Msa0230520:intron |
| AGAAACACAATGTAAGGGAT+TGG | 0.522187 | 2_2:-2711806 | Msa0230520:CDS |
| TCCATGATCTTGTCTTCCAC+GGG | 0.522466 | 2_2:+2712907 | None:intergenic |
| TCGAAAAGTTTCTTCAAGAG+AGG | 0.523656 | 2_2:-2712873 | Msa0230520:CDS |
| CAAGAGAGGATTAAGGTTGG+TGG | 0.536618 | 2_2:-2712859 | Msa0230520:CDS |
| AGTAGATGCAGCTGGTTCAA+AGG | 0.536758 | 2_2:-2712974 | Msa0230520:CDS |
| TTCAACATTGCTGAGAATGA+AGG | 0.551218 | 2_2:-2711732 | Msa0230520:CDS |
| ACCCGTGGAAGACAAGATCA+TGG | 0.560910 | 2_2:-2712908 | Msa0230520:CDS |
| CTTCAAGAGAGGATTAAGGT+TGG | 0.564429 | 2_2:-2712862 | Msa0230520:CDS |
| ATGGGTCGAGTAGATGCAGC+TGG | 0.584016 | 2_2:-2712982 | Msa0230520:CDS |
| CAGAACACAGCACAATGTGA+AGG | 0.593257 | 2_2:+2713136 | None:intergenic |
| ACAGCATCACCAAGAGCACC+AGG | 0.602480 | 2_2:+2712832 | None:intergenic |
| ATAGAAATGTTTATGAGCTG+AGG | 0.605170 | 2_2:-2711758 | Msa0230520:CDS |
| AGAACACAGCACAATGTGAA+GGG | 0.618440 | 2_2:+2713137 | None:intergenic |
| GGTTCAAAGGGAAAGAAGAA+GGG | 0.618619 | 2_2:-2712961 | Msa0230520:CDS |
| CATTGACTGTGCCAAACCCG+TGG | 0.627134 | 2_2:-2712923 | Msa0230520:CDS |
| CTTGAAGAAACACAATGTAA+GGG | 0.629064 | 2_2:-2711811 | Msa0230520:CDS |
| CATTGCTGAGAATGAAGGAG+AGG | 0.630620 | 2_2:-2711727 | Msa0230520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGATTAATTGAAATGAAA+GGG | + | chr2_2:2711559-2711578 | None:intergenic | 15.0% |
| !! | TTATGATTAATTGAAATGAA+AGG | + | chr2_2:2711560-2711579 | None:intergenic | 15.0% |
| !!! | GGATAATTTTTTTGAAAATA+AGG | + | chr2_2:2712590-2712609 | None:intergenic | 15.0% |
| !! | TATGATTAATTGAAATGAAA+GGG | + | chr2_2:2711559-2711578 | None:intergenic | 15.0% |
| !! | TTATGATTAATTGAAATGAA+AGG | + | chr2_2:2711560-2711579 | None:intergenic | 15.0% |
| !!! | GGATAATTTTTTTGAAAATA+AGG | + | chr2_2:2712590-2712609 | None:intergenic | 15.0% |
| !! | ATGATTAATTGAAATGAAAG+GGG | + | chr2_2:2711558-2711577 | None:intergenic | 20.0% |
| !!! | AGTTTTTTGTTTTGTTTGTT+TGG | - | chr2_2:2711921-2711940 | Msa0230520:intron | 20.0% |
| !!! | ATTTAGGTTGTTTTTTATGA+TGG | - | chr2_2:2711982-2712001 | Msa0230520:intron | 20.0% |
| !!! | AGTGTTAAAATTGATTCTAA+AGG | + | chr2_2:2712191-2712210 | None:intergenic | 20.0% |
| !!! | TGATTTTGTAAAACTAATGT+TGG | + | chr2_2:2712257-2712276 | None:intergenic | 20.0% |
| !!! | TTATGTTAACTTTTGATTCA+TGG | - | chr2_2:2712435-2712454 | Msa0230520:intron | 20.0% |
| !!! | CCAATAATATTAGAAGTTTT+TGG | + | chr2_2:2712501-2712520 | None:intergenic | 20.0% |
| !! | CCAAAAACTTCTAATATTAT+TGG | - | chr2_2:2712498-2712517 | Msa0230520:intron | 20.0% |
| !!! | TTTTGTTCAATTAAGAATTG+CGG | - | chr2_2:2713050-2713069 | Msa0230520:intron | 20.0% |
| !! | ATGATTAATTGAAATGAAAG+GGG | + | chr2_2:2711558-2711577 | None:intergenic | 20.0% |
| !!! | AGTTTTTTGTTTTGTTTGTT+TGG | - | chr2_2:2711921-2711940 | Msa0230520:intron | 20.0% |
| !!! | ATTTAGGTTGTTTTTTATGA+TGG | - | chr2_2:2711982-2712001 | Msa0230520:intron | 20.0% |
| !!! | AGTGTTAAAATTGATTCTAA+AGG | + | chr2_2:2712191-2712210 | None:intergenic | 20.0% |
| !!! | TGATTTTGTAAAACTAATGT+TGG | + | chr2_2:2712257-2712276 | None:intergenic | 20.0% |
| !!! | TTATGTTAACTTTTGATTCA+TGG | - | chr2_2:2712435-2712454 | Msa0230520:intron | 20.0% |
| !!! | CCAATAATATTAGAAGTTTT+TGG | + | chr2_2:2712501-2712520 | None:intergenic | 20.0% |
| !! | CCAAAAACTTCTAATATTAT+TGG | - | chr2_2:2712498-2712517 | Msa0230520:intron | 20.0% |
| !!! | TTTTGTTCAATTAAGAATTG+CGG | - | chr2_2:2713050-2713069 | Msa0230520:intron | 20.0% |
| ! | TCATTCATAGAAGACAAAAA+TGG | - | chr2_2:2711622-2711641 | Msa0230520:three_prime_UTR | 25.0% |
| ! | CATTCATAGAAGACAAAAAT+GGG | - | chr2_2:2711623-2711642 | Msa0230520:three_prime_UTR | 25.0% |
| !!! | TTTTTGTTTTGTTTGTTTGG+AGG | - | chr2_2:2711924-2711943 | Msa0230520:intron | 25.0% |
| !! | GGAATTCAATTGTTTGATTT+AGG | - | chr2_2:2711966-2711985 | Msa0230520:intron | 25.0% |
| !!! | ACAACTAACTCACTTTTAAT+CGG | + | chr2_2:2712045-2712064 | None:intergenic | 25.0% |
| ! | ATTAAAAGTGAGTTAGTTGT+AGG | - | chr2_2:2712045-2712064 | Msa0230520:intron | 25.0% |
| ! | TTAAAAGTGAGTTAGTTGTA+GGG | - | chr2_2:2712046-2712065 | Msa0230520:intron | 25.0% |
| !! | TAAAATTGATTCTAAAGGTG+TGG | + | chr2_2:2712186-2712205 | None:intergenic | 25.0% |
| !!! | AATTTTAACACTACTAGAAG+TGG | - | chr2_2:2712199-2712218 | Msa0230520:intron | 25.0% |
| !!! | ATTGATTTTACAATCTCGTT+TGG | - | chr2_2:2712320-2712339 | Msa0230520:intron | 25.0% |
| !! | TTGATTTTACAATCTCGTTT+GGG | - | chr2_2:2712321-2712340 | Msa0230520:intron | 25.0% |
| !! | ATATTATTGGCAATTTTGTG+TGG | - | chr2_2:2712511-2712530 | Msa0230520:intron | 25.0% |
| !! | TATTATTGGCAATTTTGTGT+GGG | - | chr2_2:2712512-2712531 | Msa0230520:intron | 25.0% |
| ! | TCATTCATAGAAGACAAAAA+TGG | - | chr2_2:2711622-2711641 | Msa0230520:three_prime_UTR | 25.0% |
| ! | CATTCATAGAAGACAAAAAT+GGG | - | chr2_2:2711623-2711642 | Msa0230520:three_prime_UTR | 25.0% |
| !!! | TTTTTGTTTTGTTTGTTTGG+AGG | - | chr2_2:2711924-2711943 | Msa0230520:intron | 25.0% |
| !! | GGAATTCAATTGTTTGATTT+AGG | - | chr2_2:2711966-2711985 | Msa0230520:intron | 25.0% |
| !!! | ACAACTAACTCACTTTTAAT+CGG | + | chr2_2:2712045-2712064 | None:intergenic | 25.0% |
| ! | ATTAAAAGTGAGTTAGTTGT+AGG | - | chr2_2:2712045-2712064 | Msa0230520:intron | 25.0% |
| ! | TTAAAAGTGAGTTAGTTGTA+GGG | - | chr2_2:2712046-2712065 | Msa0230520:intron | 25.0% |
| !! | TAAAATTGATTCTAAAGGTG+TGG | + | chr2_2:2712186-2712205 | None:intergenic | 25.0% |
| !!! | AATTTTAACACTACTAGAAG+TGG | - | chr2_2:2712199-2712218 | Msa0230520:intron | 25.0% |
| !!! | ATTGATTTTACAATCTCGTT+TGG | - | chr2_2:2712320-2712339 | Msa0230520:intron | 25.0% |
| !! | TTGATTTTACAATCTCGTTT+GGG | - | chr2_2:2712321-2712340 | Msa0230520:intron | 25.0% |
| !! | ATATTATTGGCAATTTTGTG+TGG | - | chr2_2:2712511-2712530 | Msa0230520:intron | 25.0% |
| !! | TATTATTGGCAATTTTGTGT+GGG | - | chr2_2:2712512-2712531 | Msa0230520:intron | 25.0% |
| AATTGAAATGAAAGGGGAAA+AGG | + | chr2_2:2711552-2711571 | None:intergenic | 30.0% | |
| TCGAGATTCAATTTCAGTTT+CGG | + | chr2_2:2711595-2711614 | None:intergenic | 30.0% | |
| AAGAATAGAGAATAACCGTT+TGG | + | chr2_2:2711870-2711889 | None:intergenic | 30.0% | |
| ! | GGATTTGTGTTTTCTTAGTT+AGG | - | chr2_2:2711945-2711964 | Msa0230520:intron | 30.0% |
| !!! | TGTTTTTTATGATGGTTCTG+CGG | - | chr2_2:2711990-2712009 | Msa0230520:intron | 30.0% |
| !!! | AATGTGTGTGTTTGGTTTTA+GGG | + | chr2_2:2712303-2712322 | None:intergenic | 30.0% |
| GTAAAATCAATGTGTGTGTT+TGG | + | chr2_2:2712311-2712330 | None:intergenic | 30.0% | |
| TTCATGGAATATACAATCTC+TGG | - | chr2_2:2712451-2712470 | Msa0230520:intron | 30.0% | |
| TCATGGAATATACAATCTCT+GGG | - | chr2_2:2712452-2712471 | Msa0230520:intron | 30.0% | |
| ! | ATTATTGGCAATTTTGTGTG+GGG | - | chr2_2:2712513-2712532 | Msa0230520:intron | 30.0% |
| TTCTGTCTAAATTGCAATGA+TGG | - | chr2_2:2712541-2712560 | Msa0230520:intron | 30.0% | |
| TCTGTCTAAATTGCAATGAT+GGG | - | chr2_2:2712542-2712561 | Msa0230520:intron | 30.0% | |
| ! | ACACAGTTTTTGTGATCTAA+AGG | - | chr2_2:2712725-2712744 | Msa0230520:intron | 30.0% |
| ACGAGTTGTTAAAAAAAGCA+TGG | + | chr2_2:2712755-2712774 | None:intergenic | 30.0% | |
| ! | GTGTTTCTTCAAGTACTTTT+TGG | + | chr2_2:2712805-2712824 | None:intergenic | 30.0% |
| ACTTGAAGAAACACAATGTA+AGG | - | chr2_2:2712811-2712830 | Msa0230520:CDS | 30.0% | |
| CTTGAAGAAACACAATGTAA+GGG | - | chr2_2:2712812-2712831 | Msa0230520:CDS | 30.0% | |
| ATAGAAATGTTTATGAGCTG+AGG | - | chr2_2:2712865-2712884 | Msa0230520:CDS | 30.0% | |
| GAGAAGCTAACATAAGAAAA+TGG | + | chr2_2:2712971-2712990 | None:intergenic | 30.0% | |
| !! | TCTTATGTTAGCTTCTCTTT+TGG | - | chr2_2:2712974-2712993 | Msa0230520:CDS | 30.0% |
| AATTGAAATGAAAGGGGAAA+AGG | + | chr2_2:2711552-2711571 | None:intergenic | 30.0% | |
| TCGAGATTCAATTTCAGTTT+CGG | + | chr2_2:2711595-2711614 | None:intergenic | 30.0% | |
| AAGAATAGAGAATAACCGTT+TGG | + | chr2_2:2711870-2711889 | None:intergenic | 30.0% | |
| ! | GGATTTGTGTTTTCTTAGTT+AGG | - | chr2_2:2711945-2711964 | Msa0230520:intron | 30.0% |
| !!! | TGTTTTTTATGATGGTTCTG+CGG | - | chr2_2:2711990-2712009 | Msa0230520:intron | 30.0% |
| !!! | AATGTGTGTGTTTGGTTTTA+GGG | + | chr2_2:2712303-2712322 | None:intergenic | 30.0% |
| GTAAAATCAATGTGTGTGTT+TGG | + | chr2_2:2712311-2712330 | None:intergenic | 30.0% | |
| TTCATGGAATATACAATCTC+TGG | - | chr2_2:2712451-2712470 | Msa0230520:intron | 30.0% | |
| TCATGGAATATACAATCTCT+GGG | - | chr2_2:2712452-2712471 | Msa0230520:intron | 30.0% | |
| ! | ATTATTGGCAATTTTGTGTG+GGG | - | chr2_2:2712513-2712532 | Msa0230520:intron | 30.0% |
| TTCTGTCTAAATTGCAATGA+TGG | - | chr2_2:2712541-2712560 | Msa0230520:intron | 30.0% | |
| TCTGTCTAAATTGCAATGAT+GGG | - | chr2_2:2712542-2712561 | Msa0230520:intron | 30.0% | |
| ! | ACACAGTTTTTGTGATCTAA+AGG | - | chr2_2:2712725-2712744 | Msa0230520:intron | 30.0% |
| ACGAGTTGTTAAAAAAAGCA+TGG | + | chr2_2:2712755-2712774 | None:intergenic | 30.0% | |
| ! | GTGTTTCTTCAAGTACTTTT+TGG | + | chr2_2:2712805-2712824 | None:intergenic | 30.0% |
| ACTTGAAGAAACACAATGTA+AGG | - | chr2_2:2712811-2712830 | Msa0230520:CDS | 30.0% | |
| CTTGAAGAAACACAATGTAA+GGG | - | chr2_2:2712812-2712831 | Msa0230520:CDS | 30.0% | |
| ATAGAAATGTTTATGAGCTG+AGG | - | chr2_2:2712865-2712884 | Msa0230520:CDS | 30.0% | |
| GAGAAGCTAACATAAGAAAA+TGG | + | chr2_2:2712971-2712990 | None:intergenic | 30.0% | |
| !! | TCTTATGTTAGCTTCTCTTT+TGG | - | chr2_2:2712974-2712993 | Msa0230520:CDS | 30.0% |
| ATGTGAAGGGAAAAAATGGA+CGG | + | chr2_2:2711476-2711495 | None:intergenic | 35.0% | |
| CACAATGTGAAGGGAAAAAA+TGG | + | chr2_2:2711480-2711499 | None:intergenic | 35.0% | |
| AGATTCAATTTCAGTTTCGG+TGG | + | chr2_2:2711592-2711611 | None:intergenic | 35.0% | |
| TCGAAAAGTTTCTTCAAGAG+AGG | - | chr2_2:2711750-2711769 | Msa0230520:CDS | 35.0% | |
| GTTTCTTCAAGAGAGGATTA+AGG | - | chr2_2:2711757-2711776 | Msa0230520:CDS | 35.0% | |
| !! | TGATGCTGTTACTGTTTCTA+GGG | - | chr2_2:2711805-2711824 | Msa0230520:CDS | 35.0% |
| TGAATTGAAGATGGTAGGTT+TGG | + | chr2_2:2712227-2712246 | None:intergenic | 35.0% | |
| AAGAGTGAATTGAAGATGGT+AGG | + | chr2_2:2712232-2712251 | None:intergenic | 35.0% | |
| !!! | CAATGTGTGTGTTTGGTTTT+AGG | + | chr2_2:2712304-2712323 | None:intergenic | 35.0% |
| ! | ATTTTACAATCTCGTTTGGG+TGG | - | chr2_2:2712324-2712343 | Msa0230520:intron | 35.0% |
| CATATTGCGATGATGCTAAA+AGG | + | chr2_2:2712376-2712395 | None:intergenic | 35.0% | |
| AAATTATCCCCTGCTTCAAA+AGG | - | chr2_2:2712601-2712620 | Msa0230520:intron | 35.0% | |
| !!! | AACAAAAGCCTTTTGAAGCA+GGG | + | chr2_2:2712612-2712631 | None:intergenic | 35.0% |
| TGCAATTGTTCGTATTCAGA+TGG | - | chr2_2:2712635-2712654 | Msa0230520:intron | 35.0% | |
| GCAATTGTTCGTATTCAGAT+GGG | - | chr2_2:2712636-2712655 | Msa0230520:intron | 35.0% | |
| CAATTGTTCGTATTCAGATG+GGG | - | chr2_2:2712637-2712656 | Msa0230520:intron | 35.0% | |
| TTAACAACTCGTATTGTTCC+AGG | - | chr2_2:2712763-2712782 | Msa0230520:intron | 35.0% | |
| AGAAACACAATGTAAGGGAT+TGG | - | chr2_2:2712817-2712836 | Msa0230520:CDS | 35.0% | |
| TTCAACATTGCTGAGAATGA+AGG | - | chr2_2:2712891-2712910 | Msa0230520:CDS | 35.0% | |
| ! | AATTGCGGTAACACTTTTGT+TGG | - | chr2_2:2713065-2713084 | Msa0230520:intron | 35.0% |
| ! | GTTACCAGAAAGAGTATAGA+AGG | + | chr2_2:2713129-2713148 | None:intergenic | 35.0% |
| ATGTGAAGGGAAAAAATGGA+CGG | + | chr2_2:2711476-2711495 | None:intergenic | 35.0% | |
| CACAATGTGAAGGGAAAAAA+TGG | + | chr2_2:2711480-2711499 | None:intergenic | 35.0% | |
| AGATTCAATTTCAGTTTCGG+TGG | + | chr2_2:2711592-2711611 | None:intergenic | 35.0% | |
| TCGAAAAGTTTCTTCAAGAG+AGG | - | chr2_2:2711750-2711769 | Msa0230520:CDS | 35.0% | |
| GTTTCTTCAAGAGAGGATTA+AGG | - | chr2_2:2711757-2711776 | Msa0230520:CDS | 35.0% | |
| !! | TGATGCTGTTACTGTTTCTA+GGG | - | chr2_2:2711805-2711824 | Msa0230520:CDS | 35.0% |
| TGAATTGAAGATGGTAGGTT+TGG | + | chr2_2:2712227-2712246 | None:intergenic | 35.0% | |
| AAGAGTGAATTGAAGATGGT+AGG | + | chr2_2:2712232-2712251 | None:intergenic | 35.0% | |
| !!! | CAATGTGTGTGTTTGGTTTT+AGG | + | chr2_2:2712304-2712323 | None:intergenic | 35.0% |
| ! | ATTTTACAATCTCGTTTGGG+TGG | - | chr2_2:2712324-2712343 | Msa0230520:intron | 35.0% |
| CATATTGCGATGATGCTAAA+AGG | + | chr2_2:2712376-2712395 | None:intergenic | 35.0% | |
| AAATTATCCCCTGCTTCAAA+AGG | - | chr2_2:2712601-2712620 | Msa0230520:intron | 35.0% | |
| !!! | AACAAAAGCCTTTTGAAGCA+GGG | + | chr2_2:2712612-2712631 | None:intergenic | 35.0% |
| TGCAATTGTTCGTATTCAGA+TGG | - | chr2_2:2712635-2712654 | Msa0230520:intron | 35.0% | |
| GCAATTGTTCGTATTCAGAT+GGG | - | chr2_2:2712636-2712655 | Msa0230520:intron | 35.0% | |
| CAATTGTTCGTATTCAGATG+GGG | - | chr2_2:2712637-2712656 | Msa0230520:intron | 35.0% | |
| TTAACAACTCGTATTGTTCC+AGG | - | chr2_2:2712763-2712782 | Msa0230520:intron | 35.0% | |
| AGAAACACAATGTAAGGGAT+TGG | - | chr2_2:2712817-2712836 | Msa0230520:CDS | 35.0% | |
| TTCAACATTGCTGAGAATGA+AGG | - | chr2_2:2712891-2712910 | Msa0230520:CDS | 35.0% | |
| ! | AATTGCGGTAACACTTTTGT+TGG | - | chr2_2:2713065-2713084 | Msa0230520:intron | 35.0% |
| ! | GTTACCAGAAAGAGTATAGA+AGG | + | chr2_2:2713129-2713148 | None:intergenic | 35.0% |
| AGAACACAGCACAATGTGAA+GGG | + | chr2_2:2711489-2711508 | None:intergenic | 40.0% | |
| TGTTCTGTTCTGTTCTCTTG+TGG | - | chr2_2:2711508-2711527 | Msa0230520:three_prime_UTR | 40.0% | |
| TTCTGTTCTCTTGTGGCTAA+AGG | - | chr2_2:2711515-2711534 | Msa0230520:three_prime_UTR | 40.0% | |
| TGGTTCAAAGGGAAAGAAGA+AGG | - | chr2_2:2711661-2711680 | Msa0230520:three_prime_UTR | 40.0% | |
| GGTTCAAAGGGAAAGAAGAA+GGG | - | chr2_2:2711662-2711681 | Msa0230520:three_prime_UTR | 40.0% | |
| CTTCAAGAGAGGATTAAGGT+TGG | - | chr2_2:2711761-2711780 | Msa0230520:CDS | 40.0% | |
| !! | ATTAAGGTTGGTGGTAAACC+TGG | - | chr2_2:2711773-2711792 | Msa0230520:CDS | 40.0% |
| ! | GTGATGCTGTTACTGTTTCT+AGG | - | chr2_2:2711804-2711823 | Msa0230520:CDS | 40.0% |
| CTGATAGCAACTTCTCCAAA+CGG | - | chr2_2:2711852-2711871 | Msa0230520:intron | 40.0% | |
| ! | TAGGGAAAGTGACTTGTGTT+TGG | - | chr2_2:2712064-2712083 | Msa0230520:intron | 40.0% |
| GGCTAAGAGTGAATTGAAGA+TGG | + | chr2_2:2712236-2712255 | None:intergenic | 40.0% | |
| GTTTGGGTGGTATTCAAAAC+TGG | - | chr2_2:2712337-2712356 | Msa0230520:intron | 40.0% | |
| !!! | ACAAAAGCCTTTTGAAGCAG+GGG | + | chr2_2:2712611-2712630 | None:intergenic | 40.0% |
| !!! | CAACAAAAGCCTTTTGAAGC+AGG | + | chr2_2:2712613-2712632 | None:intergenic | 40.0% |
| ATCAGTCTGTCTTCAACATC+TGG | - | chr2_2:2712688-2712707 | Msa0230520:intron | 40.0% | |
| GGTCAAATACTTGAGATACC+TGG | + | chr2_2:2712784-2712803 | None:intergenic | 40.0% | |
| !! | GTTAGCTTCTCTTTTGGCTA+TGG | - | chr2_2:2712980-2712999 | Msa0230520:CDS | 40.0% |
| ! | CGGTAACACTTTTGTTGGAA+TGG | - | chr2_2:2713070-2713089 | Msa0230520:intron | 40.0% |
| AGAACACAGCACAATGTGAA+GGG | + | chr2_2:2711489-2711508 | None:intergenic | 40.0% | |
| TGTTCTGTTCTGTTCTCTTG+TGG | - | chr2_2:2711508-2711527 | Msa0230520:three_prime_UTR | 40.0% | |
| TTCTGTTCTCTTGTGGCTAA+AGG | - | chr2_2:2711515-2711534 | Msa0230520:three_prime_UTR | 40.0% | |
| TGGTTCAAAGGGAAAGAAGA+AGG | - | chr2_2:2711661-2711680 | Msa0230520:three_prime_UTR | 40.0% | |
| GGTTCAAAGGGAAAGAAGAA+GGG | - | chr2_2:2711662-2711681 | Msa0230520:three_prime_UTR | 40.0% | |
| CTTCAAGAGAGGATTAAGGT+TGG | - | chr2_2:2711761-2711780 | Msa0230520:CDS | 40.0% | |
| !! | ATTAAGGTTGGTGGTAAACC+TGG | - | chr2_2:2711773-2711792 | Msa0230520:CDS | 40.0% |
| ! | GTGATGCTGTTACTGTTTCT+AGG | - | chr2_2:2711804-2711823 | Msa0230520:CDS | 40.0% |
| CTGATAGCAACTTCTCCAAA+CGG | - | chr2_2:2711852-2711871 | Msa0230520:intron | 40.0% | |
| ! | TAGGGAAAGTGACTTGTGTT+TGG | - | chr2_2:2712064-2712083 | Msa0230520:intron | 40.0% |
| GGCTAAGAGTGAATTGAAGA+TGG | + | chr2_2:2712236-2712255 | None:intergenic | 40.0% | |
| GTTTGGGTGGTATTCAAAAC+TGG | - | chr2_2:2712337-2712356 | Msa0230520:intron | 40.0% | |
| !!! | ACAAAAGCCTTTTGAAGCAG+GGG | + | chr2_2:2712611-2712630 | None:intergenic | 40.0% |
| !!! | CAACAAAAGCCTTTTGAAGC+AGG | + | chr2_2:2712613-2712632 | None:intergenic | 40.0% |
| ATCAGTCTGTCTTCAACATC+TGG | - | chr2_2:2712688-2712707 | Msa0230520:intron | 40.0% | |
| GGTCAAATACTTGAGATACC+TGG | + | chr2_2:2712784-2712803 | None:intergenic | 40.0% | |
| !! | GTTAGCTTCTCTTTTGGCTA+TGG | - | chr2_2:2712980-2712999 | Msa0230520:CDS | 40.0% |
| ! | CGGTAACACTTTTGTTGGAA+TGG | - | chr2_2:2713070-2713089 | Msa0230520:intron | 40.0% |
| CAGAACACAGCACAATGTGA+AGG | + | chr2_2:2711490-2711509 | None:intergenic | 45.0% | |
| ! | AGTAGATGCAGCTGGTTCAA+AGG | - | chr2_2:2711649-2711668 | Msa0230520:three_prime_UTR | 45.0% |
| ! | GTAGATGCAGCTGGTTCAAA+GGG | - | chr2_2:2711650-2711669 | Msa0230520:three_prime_UTR | 45.0% |
| TCCATGATCTTGTCTTCCAC+GGG | + | chr2_2:2711719-2711738 | None:intergenic | 45.0% | |
| GTCCATGATCTTGTCTTCCA+CGG | + | chr2_2:2711720-2711739 | None:intergenic | 45.0% | |
| CAAGAGAGGATTAAGGTTGG+TGG | - | chr2_2:2711764-2711783 | Msa0230520:CDS | 45.0% | |
| CATTGCTGAGAATGAAGGAG+AGG | - | chr2_2:2712896-2712915 | Msa0230520:CDS | 45.0% | |
| ! | ATGCTCGAGACATGTTGCTT+TGG | - | chr2_2:2713004-2713023 | Msa0230520:intron | 45.0% |
| AGCGCCTTCTATACTCTTTC+TGG | - | chr2_2:2713122-2713141 | Msa0230520:five_prime_UTR | 45.0% | |
| CAGAACACAGCACAATGTGA+AGG | + | chr2_2:2711490-2711509 | None:intergenic | 45.0% | |
| ! | AGTAGATGCAGCTGGTTCAA+AGG | - | chr2_2:2711649-2711668 | Msa0230520:three_prime_UTR | 45.0% |
| ! | GTAGATGCAGCTGGTTCAAA+GGG | - | chr2_2:2711650-2711669 | Msa0230520:three_prime_UTR | 45.0% |
| TCCATGATCTTGTCTTCCAC+GGG | + | chr2_2:2711719-2711738 | None:intergenic | 45.0% | |
| GTCCATGATCTTGTCTTCCA+CGG | + | chr2_2:2711720-2711739 | None:intergenic | 45.0% | |
| CAAGAGAGGATTAAGGTTGG+TGG | - | chr2_2:2711764-2711783 | Msa0230520:CDS | 45.0% | |
| CATTGCTGAGAATGAAGGAG+AGG | - | chr2_2:2712896-2712915 | Msa0230520:CDS | 45.0% | |
| ! | ATGCTCGAGACATGTTGCTT+TGG | - | chr2_2:2713004-2713023 | Msa0230520:intron | 45.0% |
| AGCGCCTTCTATACTCTTTC+TGG | - | chr2_2:2713122-2713141 | Msa0230520:five_prime_UTR | 45.0% | |
| GATCTTGTCTTCCACGGGTT+TGG | + | chr2_2:2711714-2711733 | None:intergenic | 50.0% | |
| ACCCGTGGAAGACAAGATCA+TGG | - | chr2_2:2711715-2711734 | Msa0230520:exon | 50.0% | |
| GATCTTGTCTTCCACGGGTT+TGG | + | chr2_2:2711714-2711733 | None:intergenic | 50.0% | |
| ACCCGTGGAAGACAAGATCA+TGG | - | chr2_2:2711715-2711734 | Msa0230520:exon | 50.0% | |
| ATGGGTCGAGTAGATGCAGC+TGG | - | chr2_2:2711641-2711660 | Msa0230520:three_prime_UTR | 55.0% | |
| CACGGGTTTGGCACAGTCAA+TGG | + | chr2_2:2711702-2711721 | None:intergenic | 55.0% | |
| ! | CATTGACTGTGCCAAACCCG+TGG | - | chr2_2:2711700-2711719 | Msa0230520:exon | 55.0% |
| GGTGGTAAACCTGGTGCTCT+TGG | - | chr2_2:2711782-2711801 | Msa0230520:CDS | 55.0% | |
| !! | ACAGCATCACCAAGAGCACC+AGG | + | chr2_2:2711794-2711813 | None:intergenic | 55.0% |
| ATGGGTCGAGTAGATGCAGC+TGG | - | chr2_2:2711641-2711660 | Msa0230520:three_prime_UTR | 55.0% | |
| CACGGGTTTGGCACAGTCAA+TGG | + | chr2_2:2711702-2711721 | None:intergenic | 55.0% | |
| ! | CATTGACTGTGCCAAACCCG+TGG | - | chr2_2:2711700-2711719 | Msa0230520:exon | 55.0% |
| GGTGGTAAACCTGGTGCTCT+TGG | - | chr2_2:2711782-2711801 | Msa0230520:CDS | 55.0% | |
| !! | ACAGCATCACCAAGAGCACC+AGG | + | chr2_2:2711794-2711813 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 2711470 | 2713175 | 2711470 | ID=Msa0230520;Name=Msa0230520 |
| chr2_2 | mRNA | 2711470 | 2713175 | 2711470 | ID=Msa0230520-mRNA-1;Parent=Msa0230520;Name=Msa0230520-mRNA-1;_AED=0.00;_eAED=0.00;_QI=76|1|1|1|0.5|0.33|3|246|125 |
| chr2_2 | exon | 2711470 | 2711860 | 2711470 | ID=Msa0230520-mRNA-1:exon:925;Parent=Msa0230520-mRNA-1 |
| chr2_2 | exon | 2712772 | 2713013 | 2712772 | ID=Msa0230520-mRNA-1:exon:924;Parent=Msa0230520-mRNA-1 |
| chr2_2 | exon | 2713109 | 2713175 | 2713109 | ID=Msa0230520-mRNA-1:exon:923;Parent=Msa0230520-mRNA-1 |
| chr2_2 | five_prime_UTR | 2713109 | 2713175 | 2713109 | ID=Msa0230520-mRNA-1:five_prime_utr;Parent=Msa0230520-mRNA-1 |
| chr2_2 | five_prime_UTR | 2713005 | 2713013 | 2713005 | ID=Msa0230520-mRNA-1:five_prime_utr;Parent=Msa0230520-mRNA-1 |
| chr2_2 | CDS | 2712772 | 2713004 | 2712772 | ID=Msa0230520-mRNA-1:cds;Parent=Msa0230520-mRNA-1 |
| chr2_2 | CDS | 2711716 | 2711860 | 2711716 | ID=Msa0230520-mRNA-1:cds;Parent=Msa0230520-mRNA-1 |
| chr2_2 | three_prime_UTR | 2711470 | 2711715 | 2711470 | ID=Msa0230520-mRNA-1:three_prime_utr;Parent=Msa0230520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
