Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0306690 | XP_003592267.1 | 100.000 | 111 | 0 | 0 | 1 | 111 | 1 | 111 | 6.15e-71 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0306690 | sp|Q9M352|RL362_ARATH | 80.180 | 111 | 22 | 0 | 1 | 111 | 1 | 111 | 1.90e-57 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0306690 | G7IAL7 | 100.000 | 111 | 0 | 0 | 1 | 111 | 1 | 111 | 2.94e-71 | 217 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0306690 | 0.885587 | 7.149372e-72 | -8.615850e-47 |
| Msa0002790 | Msa0306690 | 0.913319 | 7.061596e-84 | -8.615850e-47 |
| Msa0003780 | Msa0306690 | 0.812100 | 5.023577e-51 | -8.615850e-47 |
| Msa0022970 | Msa0306690 | 0.880310 | 6.098791e-70 | -8.615850e-47 |
| Msa0032780 | Msa0306690 | 0.810353 | 1.202095e-50 | -8.615850e-47 |
| Msa0032810 | Msa0306690 | 0.854762 | 9.917897e-62 | -8.615850e-47 |
| Msa0038090 | Msa0306690 | 0.843291 | 1.533846e-58 | -8.615850e-47 |
| Msa0040690 | Msa0306690 | 0.811780 | 5.897950e-51 | -8.615850e-47 |
| Msa0042280 | Msa0306690 | 0.819663 | 1.031696e-52 | -8.615850e-47 |
| Msa0045730 | Msa0306690 | 0.902818 | 6.570072e-79 | -8.615850e-47 |
| Msa0047160 | Msa0306690 | 0.816903 | 4.349311e-52 | -8.615850e-47 |
| Msa0048180 | Msa0306690 | 0.843960 | 1.016157e-58 | -8.615850e-47 |
| Msa0074030 | Msa0306690 | 0.835088 | 2.056677e-56 | -8.615850e-47 |
| Msa0086750 | Msa0306690 | 0.874509 | 6.389152e-68 | -8.615850e-47 |
| Msa0094470 | Msa0306690 | 0.800426 | 1.449168e-48 | -8.615850e-47 |
| Msa0116130 | Msa0306690 | 0.905450 | 4.238209e-80 | -8.615850e-47 |
| Msa0116670 | Msa0306690 | 0.893565 | 5.586558e-75 | -8.615850e-47 |
| Msa0118710 | Msa0306690 | 0.884265 | 2.223143e-71 | -8.615850e-47 |
| Msa0128860 | Msa0306690 | 0.826630 | 2.441756e-54 | -8.615850e-47 |
| Msa0133540 | Msa0306690 | 0.988603 | 1.135294e-174 | -8.615850e-47 |
| Msa0138890 | Msa0306690 | 0.805410 | 1.352963e-49 | -8.615850e-47 |
| Msa0146340 | Msa0306690 | 0.851593 | 8.021530e-61 | -8.615850e-47 |
| Msa0163760 | Msa0306690 | 0.862601 | 4.515642e-64 | -8.615850e-47 |
| Msa0167480 | Msa0306690 | 0.839245 | 1.777804e-57 | -8.615850e-47 |
| Msa0172900 | Msa0306690 | 0.809851 | 1.542474e-50 | -8.615850e-47 |
| Msa0172930 | Msa0306690 | 0.823168 | 1.601177e-53 | -8.615850e-47 |
| Msa0173530 | Msa0306690 | 0.891866 | 2.686561e-74 | -8.615850e-47 |
| Msa0174730 | Msa0306690 | 0.824551 | 7.590653e-54 | -8.615850e-47 |
| Msa0181490 | Msa0306690 | 0.992422 | 3.410140e-193 | -8.615850e-47 |
| Msa0187930 | Msa0306690 | 0.809509 | 1.826861e-50 | -8.615850e-47 |
| Msa0194540 | Msa0306690 | 0.803908 | 2.785052e-49 | -8.615850e-47 |
| Msa0210360 | Msa0306690 | 0.839952 | 1.164579e-57 | -8.615850e-47 |
| Msa0218720 | Msa0306690 | 0.806881 | 6.631401e-50 | -8.615850e-47 |
| Msa0218830 | Msa0306690 | 0.866232 | 3.314620e-65 | -8.615850e-47 |
| Msa0219120 | Msa0306690 | 0.864396 | 1.253651e-64 | -8.615850e-47 |
| Msa0221030 | Msa0306690 | 0.850448 | 1.686773e-60 | -8.615850e-47 |
| Msa0222730 | Msa0306690 | 0.813628 | 2.324675e-51 | -8.615850e-47 |
| Msa0224560 | Msa0306690 | 0.833883 | 4.129502e-56 | -8.615850e-47 |
| Msa0229150 | Msa0306690 | 0.801025 | 1.093981e-48 | -8.615850e-47 |
| Msa0230490 | Msa0306690 | 0.870508 | 1.384390e-66 | -8.615850e-47 |
| Msa0230520 | Msa0306690 | 0.876860 | 9.977458e-69 | -8.615850e-47 |
| Msa0231100 | Msa0306690 | 0.847519 | 1.098765e-59 | -8.615850e-47 |
| Msa0243140 | Msa0306690 | 0.801542 | 8.571400e-49 | -8.615850e-47 |
| Msa0244780 | Msa0306690 | 0.811721 | 6.075553e-51 | -8.615850e-47 |
| Msa0257450 | Msa0306690 | 0.802380 | 5.766944e-49 | -8.615850e-47 |
| Msa0258850 | Msa0306690 | 0.857824 | 1.254634e-62 | -8.615850e-47 |
| Msa0262480 | Msa0306690 | 0.839209 | 1.817007e-57 | -8.615850e-47 |
| Msa0264010 | Msa0306690 | 0.823594 | 1.273369e-53 | -8.615850e-47 |
| Msa0269180 | Msa0306690 | 0.835036 | 2.119268e-56 | -8.615850e-47 |
| Msa0289580 | Msa0306690 | 0.875573 | 2.769688e-68 | -8.615850e-47 |
| Msa0289610 | Msa0306690 | 0.882687 | 8.454992e-71 | -8.615850e-47 |
| Msa0296250 | Msa0306690 | 0.800731 | 1.255856e-48 | -8.615850e-47 |
| Msa0297830 | Msa0306690 | 0.830041 | 3.670614e-55 | -8.615850e-47 |
| Msa0298200 | Msa0306690 | 0.854500 | 1.181100e-61 | -8.615850e-47 |
| Msa0300350 | Msa0306690 | 0.830948 | 2.202458e-55 | -8.615850e-47 |
| Msa0301220 | Msa0306690 | 0.807112 | 5.927121e-50 | -8.615850e-47 |
| Msa0304660 | Msa0306690 | 0.800494 | 1.403532e-48 | -8.615850e-47 |
| Msa0306690 | Msa0310080 | 0.803094 | 4.107226e-49 | -8.615850e-47 |
| Msa0306690 | Msa0317910 | 0.816936 | 4.275947e-52 | -8.615850e-47 |
| Msa0306690 | Msa0321640 | 0.800972 | 1.121421e-48 | -8.615850e-47 |
| Msa0306690 | Msa0327300 | 0.890394 | 1.024709e-73 | -8.615850e-47 |
| Msa0306690 | Msa0327330 | 0.865955 | 4.056559e-65 | -8.615850e-47 |
| Msa0306690 | Msa0331700 | 0.800158 | 1.643168e-48 | -8.615850e-47 |
| Msa0306690 | Msa0335840 | 0.831099 | 2.022123e-55 | -8.615850e-47 |
| Msa0306690 | Msa0336010 | 0.822236 | 2.638263e-53 | -8.615850e-47 |
| Msa0306690 | Msa0337670 | 0.823750 | 1.170549e-53 | -8.615850e-47 |
| Msa0306690 | Msa0348830 | 0.901987 | 1.536124e-78 | -8.615850e-47 |
| Msa0306690 | Msa0355680 | 0.807493 | 4.921615e-50 | -8.615850e-47 |
| Msa0306690 | Msa0423750 | 0.800267 | 1.561873e-48 | -8.615850e-47 |
| Msa0306690 | Msa0443390 | 0.874213 | 8.050291e-68 | -8.615850e-47 |
| Msa0306690 | Msa0481850 | 0.850529 | 1.601097e-60 | -8.615850e-47 |
| Msa0306690 | Msa0483110 | 0.856382 | 3.342131e-62 | -8.615850e-47 |
| Msa0306690 | Msa0526540 | 0.849052 | 4.142298e-60 | -8.615850e-47 |
| Msa0306690 | Msa0527150 | 0.820358 | 7.156386e-53 | -8.615850e-47 |
| Msa0306690 | Msa0534750 | 0.860856 | 1.542208e-63 | -8.615850e-47 |
| Msa0306690 | Msa0571920 | 0.814366 | 1.598037e-51 | -8.615850e-47 |
| Msa0306690 | Msa0576940 | 0.849130 | 3.940325e-60 | -8.615850e-47 |
| Msa0306690 | Msa0584260 | 0.805945 | 1.044705e-49 | -8.615850e-47 |
| Msa0306690 | Msa0586420 | 0.825048 | 5.795589e-54 | -8.615850e-47 |
| Msa0306690 | Msa0588630 | -0.834689 | 2.592473e-56 | -8.615850e-47 |
| Msa0306690 | Msa0590940 | 0.810757 | 9.837055e-51 | -8.615850e-47 |
| Msa0306690 | Msa0596370 | 0.817443 | 3.289089e-52 | -8.615850e-47 |
| Msa0306690 | Msa0603320 | 0.809890 | 1.512876e-50 | -8.615850e-47 |
| Msa0306690 | Msa0612390 | 0.805646 | 1.207490e-49 | -8.615850e-47 |
| Msa0306690 | Msa0615580 | 0.861100 | 1.300908e-63 | -8.615850e-47 |
| Msa0306690 | Msa0617540 | 0.818204 | 2.214853e-52 | -8.615850e-47 |
| Msa0306690 | Msa0620890 | 0.810836 | 9.455791e-51 | -8.615850e-47 |
| Msa0306690 | Msa0622750 | 0.878377 | 2.950879e-69 | -8.615850e-47 |
| Msa0306690 | Msa0623200 | 0.901349 | 2.930800e-78 | -8.615850e-47 |
| Msa0306690 | Msa0664560 | 0.801015 | 1.099181e-48 | -8.615850e-47 |
| Msa0306690 | Msa0666230 | 0.874844 | 4.915044e-68 | -8.615850e-47 |
| Msa0306690 | Msa0684160 | 0.825883 | 3.675469e-54 | -8.615850e-47 |
| Msa0306690 | Msa0698780 | 0.826492 | 2.633312e-54 | -8.615850e-47 |
| Msa0306690 | Msa0705800 | 0.824393 | 8.272222e-54 | -8.615850e-47 |
| Msa0306690 | Msa0706500 | 0.807852 | 4.127824e-50 | -8.615850e-47 |
| Msa0306690 | Msa0712610 | 0.875916 | 2.112854e-68 | -8.615850e-47 |
| Msa0306690 | Msa0717380 | 0.820210 | 7.736330e-53 | -8.615850e-47 |
| Msa0306690 | Msa0719420 | 0.821264 | 4.427649e-53 | -8.615850e-47 |
| Msa0306690 | Msa0729200 | 0.884425 | 1.939521e-71 | -8.615850e-47 |
| Msa0306690 | Msa0738100 | 0.844311 | 8.178369e-59 | -8.615850e-47 |
| Msa0306690 | Msa0746960 | 0.802869 | 4.572426e-49 | -8.615850e-47 |
| Msa0306690 | Msa0766080 | 0.821915 | 3.131551e-53 | -8.615850e-47 |
| Msa0306690 | Msa0769590 | 0.887276 | 1.644791e-72 | -8.615850e-47 |
| Msa0306690 | Msa0780490 | 0.859966 | 2.868468e-63 | -8.615850e-47 |
| Msa0306690 | Msa0781080 | 0.874307 | 7.478367e-68 | -8.615850e-47 |
| Msa0306690 | Msa0785130 | 0.869578 | 2.787403e-66 | -8.615850e-47 |
| Msa0306690 | Msa0789680 | 0.819902 | 9.101459e-53 | -8.615850e-47 |
| Msa0306690 | Msa0806880 | 0.898398 | 5.515797e-77 | -8.615850e-47 |
| Msa0306690 | Msa0817540 | 0.865057 | 7.782549e-65 | -8.615850e-47 |
| Msa0306690 | Msa0827380 | 0.879352 | 1.337111e-69 | -8.615850e-47 |
| Msa0306690 | Msa0844220 | -0.803391 | 3.564672e-49 | -8.615850e-47 |
| Msa0306690 | Msa0867060 | 0.804008 | 2.654188e-49 | -8.615850e-47 |
| Msa0306690 | Msa0876170 | 0.884408 | 1.966826e-71 | -8.615850e-47 |
| Msa0306690 | Msa0888810 | 0.818634 | 1.769088e-52 | -8.615850e-47 |
| Msa0306690 | Msa0913240 | 0.801123 | 1.044540e-48 | -8.615850e-47 |
| Msa0306690 | Msa0945480 | 0.868533 | 6.084885e-66 | -8.615850e-47 |
| Msa0306690 | Msa0953310 | 0.800890 | 1.165584e-48 | -8.615850e-47 |
| Msa0306690 | Msa1006840 | 0.803231 | 3.847190e-49 | -8.615850e-47 |
| Msa0306690 | Msa1010310 | 0.829661 | 4.543538e-55 | -8.615850e-47 |
| Msa0306690 | Msa1019240 | 0.869860 | 2.255247e-66 | -8.615850e-47 |
| Msa0306690 | Msa1019260 | 0.860026 | 2.750499e-63 | -8.615850e-47 |
| Msa0306690 | Msa1021120 | 0.821794 | 3.339995e-53 | -8.615850e-47 |
| Msa0306690 | Msa1039470 | 0.817192 | 3.745246e-52 | -8.615850e-47 |
| Msa0306690 | Msa1039520 | 0.813850 | 2.077544e-51 | -8.615850e-47 |
| Msa0306690 | Msa1040160 | 0.803792 | 2.944050e-49 | -8.615850e-47 |
| Msa0306690 | Msa1043690 | 0.816054 | 6.739459e-52 | -8.615850e-47 |
| Msa0306690 | Msa1048690 | 0.805983 | 1.025567e-49 | -8.615850e-47 |
| Msa0306690 | Msa1072710 | 0.873412 | 1.500301e-67 | -8.615850e-47 |
| Msa0306690 | Msa1078870 | 0.815390 | 9.474361e-52 | -8.615850e-47 |
| Msa0306690 | Msa1078980 | 0.800704 | 1.272311e-48 | -8.615850e-47 |
| Msa0306690 | Msa1080350 | 0.866234 | 3.308532e-65 | -8.615850e-47 |
| Msa0306690 | Msa1088490 | 0.878101 | 3.687124e-69 | -8.615850e-47 |
| Msa0306690 | Msa1094380 | 0.824124 | 9.564545e-54 | -8.615850e-47 |
| Msa0306690 | Msa1096900 | 0.806561 | 7.747765e-50 | -8.615850e-47 |
| Msa0306690 | Msa1100710 | 0.804559 | 2.038697e-49 | -8.615850e-47 |
| Msa0306690 | Msa1104140 | 0.837242 | 5.835793e-57 | -8.615850e-47 |
| Msa0306690 | Msa1104210 | 0.863874 | 1.822574e-64 | -8.615850e-47 |
| Msa0306690 | Msa1125860 | 0.868791 | 5.020901e-66 | -8.615850e-47 |
| Msa0306690 | Msa1126060 | 0.865901 | 4.219694e-65 | -8.615850e-47 |
| Msa0306690 | Msa1126520 | 0.816859 | 4.451003e-52 | -8.615850e-47 |
| Msa0306690 | Msa1135890 | 0.813481 | 2.504812e-51 | -8.615850e-47 |
| Msa0306690 | Msa1165780 | 0.827524 | 1.492139e-54 | -8.615850e-47 |
| Msa0306690 | Msa1166860 | 0.803581 | 3.256300e-49 | -8.615850e-47 |
| Msa0306690 | Msa1166870 | 0.868054 | 8.680908e-66 | -8.615850e-47 |
| Msa0306690 | Msa1167540 | 0.836913 | 7.081325e-57 | -8.615850e-47 |
| Msa0306690 | Msa1167550 | 0.827009 | 1.982484e-54 | -8.615850e-47 |
| Msa0306690 | Msa1186980 | 0.830059 | 3.634443e-55 | -8.615850e-47 |
| Msa0306690 | Msa1195300 | 0.848842 | 4.734849e-60 | -8.615850e-47 |
| Msa0306690 | Msa1208020 | 0.833877 | 4.143881e-56 | -8.615850e-47 |
| Msa0306690 | Msa1215820 | 0.881970 | 1.541498e-70 | -8.615850e-47 |
| Msa0306690 | Msa1241190 | 0.803484 | 3.409612e-49 | -8.615850e-47 |
| Msa0306690 | Msa1256950 | 0.810908 | 9.123439e-51 | -8.615850e-47 |
| Msa0306690 | Msa1260530 | 0.804075 | 2.570429e-49 | -8.615850e-47 |
| Msa0306690 | Msa1262890 | 0.812059 | 5.129495e-51 | -8.615850e-47 |
| Msa0306690 | Msa1265630 | 0.814837 | 1.257267e-51 | -8.615850e-47 |
| Msa0306690 | Msa1273340 | 0.813512 | 2.465198e-51 | -8.615850e-47 |
| Msa0306690 | Msa1299590 | 0.834893 | 2.303369e-56 | -8.615850e-47 |
| Msa0306690 | Msa1305050 | 0.818282 | 2.126529e-52 | -8.615850e-47 |
| Msa0306690 | Msa1315890 | 0.803159 | 3.981075e-49 | -8.615850e-47 |
| Msa0306690 | Msa1329540 | 0.804856 | 1.767100e-49 | -8.615850e-47 |
| Msa0306690 | Msa1331250 | 0.815528 | 8.825992e-52 | -8.615850e-47 |
| Msa0306690 | Msa1331710 | 0.824809 | 6.601431e-54 | -8.615850e-47 |
| Msa0306690 | Msa1332250 | 0.820713 | 5.932323e-53 | -8.615850e-47 |
| Msa0306690 | Msa1338190 | 0.824924 | 6.200182e-54 | -8.615850e-47 |
| Msa0306690 | Msa1343260 | 0.811133 | 8.152985e-51 | -8.615850e-47 |
| Msa0306690 | Msa1349570 | 0.876171 | 1.725454e-68 | -8.615850e-47 |
| Msa0306690 | Msa1356790 | 0.877005 | 8.885416e-69 | -8.615850e-47 |
| Msa0306690 | Msa1362790 | 0.863217 | 2.914937e-64 | -8.615850e-47 |
| Msa0306690 | Msa1363330 | 0.847125 | 1.409657e-59 | -8.615850e-47 |
| Msa0306690 | Msa1366180 | 0.878723 | 2.229180e-69 | -8.615850e-47 |
| Msa0306690 | Msa1369190 | 0.872252 | 3.668222e-67 | -8.615850e-47 |
| Msa0306690 | Msa1374240 | 0.803421 | 3.513634e-49 | -8.615850e-47 |
| Msa0306690 | Msa1379760 | 0.834391 | 3.078903e-56 | -8.615850e-47 |
| Msa0306690 | Msa1386600 | 0.848084 | 7.676148e-60 | -8.615850e-47 |
| Msa0306690 | Msa1387410 | 0.854526 | 1.160469e-61 | -8.615850e-47 |
| Msa0306690 | Msa1392590 | 0.809167 | 2.163007e-50 | -8.615850e-47 |
| Msa0306690 | Msa1406080 | 0.877525 | 5.858674e-69 | -8.615850e-47 |
| Msa0306690 | Msa1413500 | 0.898837 | 3.587453e-77 | -8.615850e-47 |
| Msa0306690 | Msa1426120 | 0.827370 | 1.624281e-54 | -8.615850e-47 |
| Msa0306690 | Msa1426370 | 0.885612 | 6.995588e-72 | -8.615850e-47 |
| Msa0306690 | Msa1426490 | 0.903728 | 2.568408e-79 | -8.615850e-47 |
| Msa0306690 | Msa1427560 | 0.861525 | 9.649246e-64 | -8.615850e-47 |
| Msa0306690 | Msa1433310 | 0.809197 | 2.130984e-50 | -8.615850e-47 |
| Msa0306690 | Msa1450280 | 0.822061 | 2.897640e-53 | -8.615850e-47 |
| Msa0306690 | Msa1455950 | 0.822848 | 1.901565e-53 | -8.615850e-47 |
| Msa0306690 | Msa1456050 | 0.816476 | 5.423525e-52 | -8.615850e-47 |
| Msa0306690 | Msa1462860 | 0.811097 | 8.302981e-51 | -8.615850e-47 |
| Msa0306690 | Msa1465260 | 0.815961 | 7.070210e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0306690 | MtrunA17_Chr1g0203071 | 100.000 | 111 | 0 | 0 | 1 | 111 | 1 | 111 | 5.66e-75 | 217 |
| Msa0306690 | MtrunA17_Chr6g0470561 | 96.396 | 111 | 4 | 0 | 1 | 111 | 1 | 111 | 2.67e-72 | 210 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0306690 | AT3G53740.4 | 80.180 | 111 | 22 | 0 | 1 | 111 | 1 | 111 | 1.94e-58 | 176 |
| Msa0306690 | AT3G53740.2 | 80.180 | 111 | 22 | 0 | 1 | 111 | 1 | 111 | 1.94e-58 | 176 |
| Msa0306690 | AT3G53740.3 | 80.180 | 111 | 22 | 0 | 1 | 111 | 1 | 111 | 1.94e-58 | 176 |
| Msa0306690 | AT2G37600.1 | 82.692 | 104 | 18 | 0 | 8 | 111 | 8 | 111 | 2.14e-56 | 171 |
| Msa0306690 | AT2G37600.2 | 82.692 | 104 | 18 | 0 | 8 | 111 | 8 | 111 | 2.14e-56 | 171 |
| Msa0306690 | AT5G02450.1 | 83.019 | 106 | 17 | 1 | 7 | 111 | 3 | 108 | 8.39e-56 | 169 |
| Msa0306690 | AT3G53740.1 | 72.072 | 111 | 22 | 1 | 1 | 111 | 1 | 102 | 3.17e-49 | 152 |
Find 62 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGCACTCTCTCTGGTGTT+AGG | 0.277881 | 2_3:-65814496 | Msa0306690:five_prime_UTR |
| AAACCAGTACTTGGTTGTTT+AGG | 0.306770 | 2_3:+65814336 | None:intergenic |
| CTTCTTCTTTGCACGTTTGT+GGG | 0.313110 | 2_3:+65813668 | None:intergenic |
| TCTTCTTCTTTGCACGTTTG+TGG | 0.365751 | 2_3:+65813667 | None:intergenic |
| AAAGGGAATTCTAAGTGATT+AGG | 0.392156 | 2_3:-65813167 | Msa0306690:three_prime_UTR |
| TTTATTTGTGACAGGAGAAA+TGG | 0.397262 | 2_3:-65814361 | Msa0306690:intron |
| AAAAGACAAGAGGGCACTTA+AGG | 0.398330 | 2_3:-65813712 | Msa0306690:CDS |
| CCGCACTCTCTCTGGTGTTA+GGG | 0.410246 | 2_3:-65814495 | Msa0306690:five_prime_UTR |
| CCATTCCACCGCACTCTCTC+TGG | 0.423239 | 2_3:-65814503 | Msa0306690:five_prime_UTR |
| TCCACGTCCTTCAGCTCGCA+AGG | 0.427898 | 2_3:-65814265 | Msa0306690:CDS |
| TGCAGGGCTGGTGGTGGAGC+AGG | 0.430321 | 2_3:-65813497 | Msa0306690:intron |
| AGCAGGAGATAAGAAGAAAT+AGG | 0.434078 | 2_3:-65813480 | Msa0306690:exon |
| CATCGTCACAAAGAAGGAAT+TGG | 0.434230 | 2_3:-65814289 | Msa0306690:CDS |
| CATTAAACGTTATATGGTCT+AGG | 0.435620 | 2_3:-65813213 | Msa0306690:three_prime_UTR |
| AGTAAGCTTATAATTCCCTT+TGG | 0.437738 | 2_3:+65813090 | None:intergenic |
| GAAGTGAAGAAGCTAACCTT+AGG | 0.445240 | 2_3:+65814525 | None:intergenic |
| CCAAGTACTGGTTTGTTCGT+TGG | 0.458873 | 2_3:-65814327 | Msa0306690:CDS |
| AAGGTTGCAAAGAGAAAGCT+TGG | 0.461674 | 2_3:-65813693 | Msa0306690:CDS |
| CCAACGAACAAACCAGTACT+TGG | 0.464574 | 2_3:+65814327 | None:intergenic |
| TAATCACTTAGAATTCCCTT+TGG | 0.471460 | 2_3:+65813169 | None:intergenic |
| ATGAAAACATGGTCATCATA+AGG | 0.471890 | 2_3:+65813233 | None:intergenic |
| CCAGAGAGAGTGCGGTGGAA+TGG | 0.480153 | 2_3:+65814503 | None:intergenic |
| AACCTCATTAGAGAGGTTGC+TGG | 0.487721 | 2_3:-65813780 | Msa0306690:CDS |
| ATCACTGAGTTGCTCAAGGT+TGG | 0.503868 | 2_3:-65813735 | Msa0306690:CDS |
| TCAATGTGCAGGGCTGGTGG+TGG | 0.508415 | 2_3:-65813503 | Msa0306690:intron |
| AGGAGATGTCTAATGTCCTC+AGG | 0.510350 | 2_3:-65813641 | Msa0306690:CDS |
| ACCTCATTAGAGAGGTTGCT+GGG | 0.511316 | 2_3:-65813779 | Msa0306690:CDS |
| CCCTTGCGAGCTGAAGGACG+TGG | 0.511446 | 2_3:+65814264 | None:intergenic |
| TCTGAGATCACCGTCACTAC+AGG | 0.512556 | 2_3:-65814470 | Msa0306690:intron |
| TTTGTTATGGCTTCACATGA+TGG | 0.517974 | 2_3:-65813446 | Msa0306690:three_prime_UTR |
| GGAATTCTAAGTGATTAGGA+AGG | 0.521373 | 2_3:-65813163 | Msa0306690:three_prime_UTR |
| CCACGTCCTTCAGCTCGCAA+GGG | 0.521414 | 2_3:-65814264 | Msa0306690:CDS |
| TTGTTATGGCTTCACATGAT+GGG | 0.522554 | 2_3:-65813445 | Msa0306690:three_prime_UTR |
| AGGCCACATCGTCACAAAGA+AGG | 0.551215 | 2_3:-65814295 | Msa0306690:CDS |
| GCTCCTAAACAACCAAGTAC+TGG | 0.551611 | 2_3:-65814339 | Msa0306690:CDS |
| CACGTCCTTCAGCTCGCAAG+GGG | 0.561496 | 2_3:-65814263 | Msa0306690:CDS |
| TGATACAGTAGTTTACCAAA+GGG | 0.574844 | 2_3:-65813184 | Msa0306690:three_prime_UTR |
| ATTCCTTCTTTGTGACGATG+TGG | 0.577252 | 2_3:+65814292 | None:intergenic |
| TTGATACAGTAGTTTACCAA+AGG | 0.579967 | 2_3:-65813185 | Msa0306690:three_prime_UTR |
| TTGTTCGTTGGATTGAACAA+AGG | 0.583526 | 2_3:-65814315 | Msa0306690:CDS |
| TCAGTGATACGCTTCTCGTA+AGG | 0.584616 | 2_3:+65813750 | None:intergenic |
| AAGTGAAGAAGCTAACCTTA+GGG | 0.585753 | 2_3:+65814526 | None:intergenic |
| TGATACAGTAGTTAACCAAA+GGG | 0.586023 | 2_3:-65813105 | Msa0306690:three_prime_UTR |
| TTGATACAGTAGTTAACCAA+AGG | 0.592386 | 2_3:-65813106 | Msa0306690:three_prime_UTR |
| ACCCAGCAACCTCTCTAATG+AGG | 0.601885 | 2_3:+65813778 | None:intergenic |
| TGTGAGGAACCTCATTAGAG+AGG | 0.602916 | 2_3:-65813787 | Msa0306690:CDS |
| TCGTTCAGAAAACAAGCAAG+AGG | 0.606732 | 2_3:-65813818 | Msa0306690:intron |
| CCCTAACACCAGAGAGAGTG+CGG | 0.614155 | 2_3:+65814495 | None:intergenic |
| ACGTGCAAAGAAGAAGAGAG+AGG | 0.618868 | 2_3:-65813661 | Msa0306690:CDS |
| GCAAGAGGGTGCACTTTGTG+AGG | 0.622900 | 2_3:-65813803 | Msa0306690:CDS |
| GAAATGAATACCTGTAGTGA+CGG | 0.626819 | 2_3:+65814460 | None:intergenic |
| CTAATGTCCTCAGGAAGATG+AGG | 0.627117 | 2_3:-65813632 | Msa0306690:intron |
| CAAGGTTGGAAAAGACAAGA+GGG | 0.628294 | 2_3:-65813721 | Msa0306690:CDS |
| GCGTATCACTGAGTTGCTCA+AGG | 0.629950 | 2_3:-65813739 | Msa0306690:CDS |
| CGTTCAGAAAACAAGCAAGA+GGG | 0.632672 | 2_3:-65813817 | Msa0306690:intron |
| GAATTCTAAGTGATTAGGAA+GGG | 0.639972 | 2_3:-65813162 | Msa0306690:three_prime_UTR |
| AGATACTCGAAAGAACCCTA+AGG | 0.648690 | 2_3:-65814541 | Msa0306690:five_prime_UTR |
| TATAACGTTTAATGAAAACA+TGG | 0.659063 | 2_3:+65813222 | None:intergenic |
| TCAAGGTTGGAAAAGACAAG+AGG | 0.663036 | 2_3:-65813722 | Msa0306690:CDS |
| GAACAAACCTCATCTTCCTG+AGG | 0.694769 | 2_3:+65813625 | None:intergenic |
| ACGTCCTTCAGCTCGCAAGG+GGG | 0.706112 | 2_3:-65814262 | Msa0306690:intron |
| TAACACCAGAGAGAGTGCGG+TGG | 0.731080 | 2_3:+65814498 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAAATCTAACATAAAA+TGG | + | chr2_3:65813481-65813500 | None:intergenic | 10.0% |
| !!! | ATTTTATGTTAGATTTAAAT+TGG | - | chr2_3:65813480-65813499 | Msa0306690:exon | 10.0% |
| !! | AATTTAAATCTAACATAAAA+TGG | + | chr2_3:65813481-65813500 | None:intergenic | 10.0% |
| !!! | ATTTTATGTTAGATTTAAAT+TGG | - | chr2_3:65813480-65813499 | Msa0306690:exon | 10.0% |
| !!! | TAGATATCAAAAGATTTTAT+GGG | - | chr2_3:65814391-65814410 | Msa0306690:intron | 15.0% |
| !!! | TTTATGGGTTTATATTTTTA+AGG | - | chr2_3:65814406-65814425 | Msa0306690:intron | 15.0% |
| !!! | TAGATATCAAAAGATTTTAT+GGG | - | chr2_3:65814391-65814410 | Msa0306690:intron | 15.0% |
| !!! | TTTATGGGTTTATATTTTTA+AGG | - | chr2_3:65814406-65814425 | Msa0306690:intron | 15.0% |
| !!! | AAATTGGAATTATTAGCTTA+AGG | - | chr2_3:65813496-65813515 | Msa0306690:intron | 20.0% |
| !! | ACGAATAAAAACAATCTTTA+GGG | + | chr2_3:65813839-65813858 | None:intergenic | 20.0% |
| !! | AACGAATAAAAACAATCTTT+AGG | + | chr2_3:65813840-65813859 | None:intergenic | 20.0% |
| !!! | TTTGTTATTATTGTTATGCT+TGG | - | chr2_3:65814078-65814097 | Msa0306690:intron | 20.0% |
| !!! | CTAGATATCAAAAGATTTTA+TGG | - | chr2_3:65814390-65814409 | Msa0306690:intron | 20.0% |
| !! | TATAACGTTTAATGAAAACA+TGG | + | chr2_3:65814454-65814473 | None:intergenic | 20.0% |
| !!! | TGTTTTCATTAAACGTTATA+TGG | - | chr2_3:65814454-65814473 | Msa0306690:intron | 20.0% |
| !!! | AAATTGGAATTATTAGCTTA+AGG | - | chr2_3:65813496-65813515 | Msa0306690:intron | 20.0% |
| !! | ACGAATAAAAACAATCTTTA+GGG | + | chr2_3:65813839-65813858 | None:intergenic | 20.0% |
| !! | AACGAATAAAAACAATCTTT+AGG | + | chr2_3:65813840-65813859 | None:intergenic | 20.0% |
| !!! | TTTGTTATTATTGTTATGCT+TGG | - | chr2_3:65814078-65814097 | Msa0306690:intron | 20.0% |
| !!! | CTAGATATCAAAAGATTTTA+TGG | - | chr2_3:65814390-65814409 | Msa0306690:intron | 20.0% |
| !! | TATAACGTTTAATGAAAACA+TGG | + | chr2_3:65814454-65814473 | None:intergenic | 20.0% |
| !!! | TGTTTTCATTAAACGTTATA+TGG | - | chr2_3:65814454-65814473 | Msa0306690:intron | 20.0% |
| ! | TTTAACTCTGCAATAAAAAG+CGG | - | chr2_3:65813102-65813121 | Msa0306690:three_prime_UTR | 25.0% |
| ! | TTTGTTTGTTTATTTGTGAC+AGG | - | chr2_3:65813304-65813323 | Msa0306690:three_prime_UTR | 25.0% |
| ! | ATTAATTCATAAGCTTGTCA+AGG | - | chr2_3:65813629-65813648 | Msa0306690:intron | 25.0% |
| ! | TTAAGAAAAAACTGCTTATG+AGG | - | chr2_3:65813656-65813675 | Msa0306690:CDS | 25.0% |
| ! | TTATGAGGATGATATTTATG+AGG | - | chr2_3:65813671-65813690 | Msa0306690:CDS | 25.0% |
| ! | AATAGAAGGAGAAATAATGT+TGG | - | chr2_3:65813721-65813740 | Msa0306690:CDS | 25.0% |
| ! | ATAGAAGGAGAAATAATGTT+GGG | - | chr2_3:65813722-65813741 | Msa0306690:CDS | 25.0% |
| ! | CATTATTTCATTCATTCCTA+TGG | + | chr2_3:65813770-65813789 | None:intergenic | 25.0% |
| ! | CGAATAAAAACAATCTTTAG+GGG | + | chr2_3:65813838-65813857 | None:intergenic | 25.0% |
| ! | TTATTGTTATGCTTGGTATT+TGG | - | chr2_3:65814085-65814104 | Msa0306690:intron | 25.0% |
| ! | GTTATTATGATAAACATTCC+CGG | - | chr2_3:65814107-65814126 | Msa0306690:intron | 25.0% |
| !! | TTTAGATATTTTCAATGTGC+AGG | - | chr2_3:65814159-65814178 | Msa0306690:intron | 25.0% |
| !! | TTAGATATTTTCAATGTGCA+GGG | - | chr2_3:65814160-65814179 | Msa0306690:intron | 25.0% |
| !!! | GGTTTTGTTTACTTTTGTTA+TGG | - | chr2_3:65814214-65814233 | Msa0306690:intron | 25.0% |
| ! | TTTAACTCTGCAATAAAAAG+CGG | - | chr2_3:65813102-65813121 | Msa0306690:three_prime_UTR | 25.0% |
| ! | TTTGTTTGTTTATTTGTGAC+AGG | - | chr2_3:65813304-65813323 | Msa0306690:three_prime_UTR | 25.0% |
| ! | ATTAATTCATAAGCTTGTCA+AGG | - | chr2_3:65813629-65813648 | Msa0306690:intron | 25.0% |
| ! | TTAAGAAAAAACTGCTTATG+AGG | - | chr2_3:65813656-65813675 | Msa0306690:CDS | 25.0% |
| ! | TTATGAGGATGATATTTATG+AGG | - | chr2_3:65813671-65813690 | Msa0306690:CDS | 25.0% |
| ! | AATAGAAGGAGAAATAATGT+TGG | - | chr2_3:65813721-65813740 | Msa0306690:CDS | 25.0% |
| ! | ATAGAAGGAGAAATAATGTT+GGG | - | chr2_3:65813722-65813741 | Msa0306690:CDS | 25.0% |
| ! | CATTATTTCATTCATTCCTA+TGG | + | chr2_3:65813770-65813789 | None:intergenic | 25.0% |
| ! | CGAATAAAAACAATCTTTAG+GGG | + | chr2_3:65813838-65813857 | None:intergenic | 25.0% |
| ! | TTATTGTTATGCTTGGTATT+TGG | - | chr2_3:65814085-65814104 | Msa0306690:intron | 25.0% |
| ! | GTTATTATGATAAACATTCC+CGG | - | chr2_3:65814107-65814126 | Msa0306690:intron | 25.0% |
| !! | TTTAGATATTTTCAATGTGC+AGG | - | chr2_3:65814159-65814178 | Msa0306690:intron | 25.0% |
| !! | TTAGATATTTTCAATGTGCA+GGG | - | chr2_3:65814160-65814179 | Msa0306690:intron | 25.0% |
| !!! | GGTTTTGTTTACTTTTGTTA+TGG | - | chr2_3:65814214-65814233 | Msa0306690:intron | 25.0% |
| ATTGATATAATCGAAGAACG+AGG | + | chr2_3:65813243-65813262 | None:intergenic | 30.0% | |
| TTTATTTGTGACAGGAGAAA+TGG | - | chr2_3:65813312-65813331 | Msa0306690:three_prime_UTR | 30.0% | |
| TATGCTCGTACTTTGTATTA+AGG | - | chr2_3:65813545-65813564 | Msa0306690:intron | 30.0% | |
| CTTTGTATTAAGGATCTGTT+TGG | - | chr2_3:65813555-65813574 | Msa0306690:intron | 30.0% | |
| TATTAAGGATCTGTTTGGAT+TGG | - | chr2_3:65813560-65813579 | Msa0306690:intron | 30.0% | |
| ! | ATGAGGATGACATTTTTGTT+AGG | - | chr2_3:65813688-65813707 | Msa0306690:CDS | 30.0% |
| ! | TGAGGATGACATTTTTGTTA+GGG | - | chr2_3:65813689-65813708 | Msa0306690:CDS | 30.0% |
| TAGGGAGATATATGAATAGA+AGG | - | chr2_3:65813707-65813726 | Msa0306690:CDS | 30.0% | |
| TATTTCATTCATTCCTATGG+TGG | + | chr2_3:65813767-65813786 | None:intergenic | 30.0% | |
| ! | TTTTTGCATTCTGTTCATCT+TGG | - | chr2_3:65813806-65813825 | Msa0306690:CDS | 30.0% |
| ATGAAAACATGGTCATCATA+AGG | + | chr2_3:65814443-65814462 | None:intergenic | 30.0% | |
| CATTAAACGTTATATGGTCT+AGG | - | chr2_3:65814460-65814479 | Msa0306690:intron | 30.0% | |
| TTGATACAGTAGTTTACCAA+AGG | - | chr2_3:65814488-65814507 | Msa0306690:five_prime_UTR | 30.0% | |
| TGATACAGTAGTTTACCAAA+GGG | - | chr2_3:65814489-65814508 | Msa0306690:five_prime_UTR | 30.0% | |
| TAATCACTTAGAATTCCCTT+TGG | + | chr2_3:65814507-65814526 | None:intergenic | 30.0% | |
| AAAGGGAATTCTAAGTGATT+AGG | - | chr2_3:65814506-65814525 | Msa0306690:five_prime_UTR | 30.0% | |
| GAATTCTAAGTGATTAGGAA+GGG | - | chr2_3:65814511-65814530 | Msa0306690:five_prime_UTR | 30.0% | |
| TTGATACAGTAGTTAACCAA+AGG | - | chr2_3:65814567-65814586 | Msa0306690:five_prime_UTR | 30.0% | |
| TGATACAGTAGTTAACCAAA+GGG | - | chr2_3:65814568-65814587 | Msa0306690:five_prime_UTR | 30.0% | |
| ATTGATATAATCGAAGAACG+AGG | + | chr2_3:65813243-65813262 | None:intergenic | 30.0% | |
| TTTATTTGTGACAGGAGAAA+TGG | - | chr2_3:65813312-65813331 | Msa0306690:three_prime_UTR | 30.0% | |
| TATGCTCGTACTTTGTATTA+AGG | - | chr2_3:65813545-65813564 | Msa0306690:intron | 30.0% | |
| CTTTGTATTAAGGATCTGTT+TGG | - | chr2_3:65813555-65813574 | Msa0306690:intron | 30.0% | |
| TATTAAGGATCTGTTTGGAT+TGG | - | chr2_3:65813560-65813579 | Msa0306690:intron | 30.0% | |
| ! | ATGAGGATGACATTTTTGTT+AGG | - | chr2_3:65813688-65813707 | Msa0306690:CDS | 30.0% |
| ! | TGAGGATGACATTTTTGTTA+GGG | - | chr2_3:65813689-65813708 | Msa0306690:CDS | 30.0% |
| TAGGGAGATATATGAATAGA+AGG | - | chr2_3:65813707-65813726 | Msa0306690:CDS | 30.0% | |
| TATTTCATTCATTCCTATGG+TGG | + | chr2_3:65813767-65813786 | None:intergenic | 30.0% | |
| ! | TTTTTGCATTCTGTTCATCT+TGG | - | chr2_3:65813806-65813825 | Msa0306690:CDS | 30.0% |
| ATGAAAACATGGTCATCATA+AGG | + | chr2_3:65814443-65814462 | None:intergenic | 30.0% | |
| CATTAAACGTTATATGGTCT+AGG | - | chr2_3:65814460-65814479 | Msa0306690:intron | 30.0% | |
| TTGATACAGTAGTTTACCAA+AGG | - | chr2_3:65814488-65814507 | Msa0306690:five_prime_UTR | 30.0% | |
| TGATACAGTAGTTTACCAAA+GGG | - | chr2_3:65814489-65814508 | Msa0306690:five_prime_UTR | 30.0% | |
| TAATCACTTAGAATTCCCTT+TGG | + | chr2_3:65814507-65814526 | None:intergenic | 30.0% | |
| AAAGGGAATTCTAAGTGATT+AGG | - | chr2_3:65814506-65814525 | Msa0306690:five_prime_UTR | 30.0% | |
| GAATTCTAAGTGATTAGGAA+GGG | - | chr2_3:65814511-65814530 | Msa0306690:five_prime_UTR | 30.0% | |
| TTGATACAGTAGTTAACCAA+AGG | - | chr2_3:65814567-65814586 | Msa0306690:five_prime_UTR | 30.0% | |
| TGATACAGTAGTTAACCAAA+GGG | - | chr2_3:65814568-65814587 | Msa0306690:five_prime_UTR | 30.0% | |
| AAGTGAAGAAGCTAACCTTA+GGG | + | chr2_3:65813150-65813169 | None:intergenic | 35.0% | |
| GAAATGAATACCTGTAGTGA+CGG | + | chr2_3:65813216-65813235 | None:intergenic | 35.0% | |
| AAACCAGTACTTGGTTGTTT+AGG | + | chr2_3:65813340-65813359 | None:intergenic | 35.0% | |
| TTGTTCGTTGGATTGAACAA+AGG | - | chr2_3:65813358-65813377 | Msa0306690:three_prime_UTR | 35.0% | |
| ATACACTATCTATCCACCAT+AGG | - | chr2_3:65813751-65813770 | Msa0306690:CDS | 35.0% | |
| CAATAACAAGAACATGTTCC+GGG | + | chr2_3:65814128-65814147 | None:intergenic | 35.0% | |
| CCAATAACAAGAACATGTTC+CGG | + | chr2_3:65814129-65814148 | None:intergenic | 35.0% | |
| AGCAGGAGATAAGAAGAAAT+AGG | - | chr2_3:65814193-65814212 | Msa0306690:intron | 35.0% | |
| ! | TTTGTTATGGCTTCACATGA+TGG | - | chr2_3:65814227-65814246 | Msa0306690:intron | 35.0% |
| TTGTTATGGCTTCACATGAT+GGG | - | chr2_3:65814228-65814247 | Msa0306690:intron | 35.0% | |
| GGAATTCTAAGTGATTAGGA+AGG | - | chr2_3:65814510-65814529 | Msa0306690:five_prime_UTR | 35.0% | |
| AAGTGAAGAAGCTAACCTTA+GGG | + | chr2_3:65813150-65813169 | None:intergenic | 35.0% | |
| GAAATGAATACCTGTAGTGA+CGG | + | chr2_3:65813216-65813235 | None:intergenic | 35.0% | |
| AAACCAGTACTTGGTTGTTT+AGG | + | chr2_3:65813340-65813359 | None:intergenic | 35.0% | |
| TTGTTCGTTGGATTGAACAA+AGG | - | chr2_3:65813358-65813377 | Msa0306690:three_prime_UTR | 35.0% | |
| ATACACTATCTATCCACCAT+AGG | - | chr2_3:65813751-65813770 | Msa0306690:CDS | 35.0% | |
| CAATAACAAGAACATGTTCC+GGG | + | chr2_3:65814128-65814147 | None:intergenic | 35.0% | |
| CCAATAACAAGAACATGTTC+CGG | + | chr2_3:65814129-65814148 | None:intergenic | 35.0% | |
| AGCAGGAGATAAGAAGAAAT+AGG | - | chr2_3:65814193-65814212 | Msa0306690:intron | 35.0% | |
| ! | TTTGTTATGGCTTCACATGA+TGG | - | chr2_3:65814227-65814246 | Msa0306690:intron | 35.0% |
| TTGTTATGGCTTCACATGAT+GGG | - | chr2_3:65814228-65814247 | Msa0306690:intron | 35.0% | |
| GGAATTCTAAGTGATTAGGA+AGG | - | chr2_3:65814510-65814529 | Msa0306690:five_prime_UTR | 35.0% | |
| AGATACTCGAAAGAACCCTA+AGG | - | chr2_3:65813132-65813151 | Msa0306690:three_prime_UTR | 40.0% | |
| GAAGTGAAGAAGCTAACCTT+AGG | + | chr2_3:65813151-65813170 | None:intergenic | 40.0% | |
| ATTCCTTCTTTGTGACGATG+TGG | + | chr2_3:65813384-65813403 | None:intergenic | 40.0% | |
| CATCGTCACAAAGAAGGAAT+TGG | - | chr2_3:65813384-65813403 | Msa0306690:three_prime_UTR | 40.0% | |
| CATTCTGTTCATCTTGGATG+TGG | - | chr2_3:65813812-65813831 | Msa0306690:CDS | 40.0% | |
| TCGTTCAGAAAACAAGCAAG+AGG | - | chr2_3:65813855-65813874 | Msa0306690:intron | 40.0% | |
| CGTTCAGAAAACAAGCAAGA+GGG | - | chr2_3:65813856-65813875 | Msa0306690:intron | 40.0% | |
| TCAAGGTTGGAAAAGACAAG+AGG | - | chr2_3:65813951-65813970 | Msa0306690:intron | 40.0% | |
| CAAGGTTGGAAAAGACAAGA+GGG | - | chr2_3:65813952-65813971 | Msa0306690:intron | 40.0% | |
| !! | AAAAGACAAGAGGGCACTTA+AGG | - | chr2_3:65813961-65813980 | Msa0306690:intron | 40.0% |
| AAGGTTGCAAAGAGAAAGCT+TGG | - | chr2_3:65813980-65813999 | Msa0306690:intron | 40.0% | |
| CTTCTTCTTTGCACGTTTGT+GGG | + | chr2_3:65814008-65814027 | None:intergenic | 40.0% | |
| TCTTCTTCTTTGCACGTTTG+TGG | + | chr2_3:65814009-65814028 | None:intergenic | 40.0% | |
| ! | CCGGAACATGTTCTTGTTAT+TGG | - | chr2_3:65814126-65814145 | Msa0306690:intron | 40.0% |
| ! | ATATTTTCAATGTGCAGGGC+TGG | - | chr2_3:65814164-65814183 | Msa0306690:intron | 40.0% |
| AGATACTCGAAAGAACCCTA+AGG | - | chr2_3:65813132-65813151 | Msa0306690:three_prime_UTR | 40.0% | |
| GAAGTGAAGAAGCTAACCTT+AGG | + | chr2_3:65813151-65813170 | None:intergenic | 40.0% | |
| ATTCCTTCTTTGTGACGATG+TGG | + | chr2_3:65813384-65813403 | None:intergenic | 40.0% | |
| CATCGTCACAAAGAAGGAAT+TGG | - | chr2_3:65813384-65813403 | Msa0306690:three_prime_UTR | 40.0% | |
| CATTCTGTTCATCTTGGATG+TGG | - | chr2_3:65813812-65813831 | Msa0306690:CDS | 40.0% | |
| TCGTTCAGAAAACAAGCAAG+AGG | - | chr2_3:65813855-65813874 | Msa0306690:intron | 40.0% | |
| CGTTCAGAAAACAAGCAAGA+GGG | - | chr2_3:65813856-65813875 | Msa0306690:intron | 40.0% | |
| TCAAGGTTGGAAAAGACAAG+AGG | - | chr2_3:65813951-65813970 | Msa0306690:intron | 40.0% | |
| CAAGGTTGGAAAAGACAAGA+GGG | - | chr2_3:65813952-65813971 | Msa0306690:intron | 40.0% | |
| !! | AAAAGACAAGAGGGCACTTA+AGG | - | chr2_3:65813961-65813980 | Msa0306690:intron | 40.0% |
| AAGGTTGCAAAGAGAAAGCT+TGG | - | chr2_3:65813980-65813999 | Msa0306690:intron | 40.0% | |
| CTTCTTCTTTGCACGTTTGT+GGG | + | chr2_3:65814008-65814027 | None:intergenic | 40.0% | |
| TCTTCTTCTTTGCACGTTTG+TGG | + | chr2_3:65814009-65814028 | None:intergenic | 40.0% | |
| ! | CCGGAACATGTTCTTGTTAT+TGG | - | chr2_3:65814126-65814145 | Msa0306690:intron | 40.0% |
| ! | ATATTTTCAATGTGCAGGGC+TGG | - | chr2_3:65814164-65814183 | Msa0306690:intron | 40.0% |
| GCTCCTAAACAACCAAGTAC+TGG | - | chr2_3:65813334-65813353 | Msa0306690:three_prime_UTR | 45.0% | |
| CCAACGAACAAACCAGTACT+TGG | + | chr2_3:65813349-65813368 | None:intergenic | 45.0% | |
| !! | CCAAGTACTGGTTTGTTCGT+TGG | - | chr2_3:65813346-65813365 | Msa0306690:three_prime_UTR | 45.0% |
| TGTGAGGAACCTCATTAGAG+AGG | - | chr2_3:65813886-65813905 | Msa0306690:intron | 45.0% | |
| AACCTCATTAGAGAGGTTGC+TGG | - | chr2_3:65813893-65813912 | Msa0306690:intron | 45.0% | |
| ACCTCATTAGAGAGGTTGCT+GGG | - | chr2_3:65813894-65813913 | Msa0306690:intron | 45.0% | |
| TCAGTGATACGCTTCTCGTA+AGG | + | chr2_3:65813926-65813945 | None:intergenic | 45.0% | |
| ATCACTGAGTTGCTCAAGGT+TGG | - | chr2_3:65813938-65813957 | Msa0306690:intron | 45.0% | |
| ACGTGCAAAGAAGAAGAGAG+AGG | - | chr2_3:65814012-65814031 | Msa0306690:intron | 45.0% | |
| AGGAGATGTCTAATGTCCTC+AGG | - | chr2_3:65814032-65814051 | Msa0306690:intron | 45.0% | |
| CTAATGTCCTCAGGAAGATG+AGG | - | chr2_3:65814041-65814060 | Msa0306690:intron | 45.0% | |
| GAACAAACCTCATCTTCCTG+AGG | + | chr2_3:65814051-65814070 | None:intergenic | 45.0% | |
| GCTCCTAAACAACCAAGTAC+TGG | - | chr2_3:65813334-65813353 | Msa0306690:three_prime_UTR | 45.0% | |
| CCAACGAACAAACCAGTACT+TGG | + | chr2_3:65813349-65813368 | None:intergenic | 45.0% | |
| !! | CCAAGTACTGGTTTGTTCGT+TGG | - | chr2_3:65813346-65813365 | Msa0306690:three_prime_UTR | 45.0% |
| TGTGAGGAACCTCATTAGAG+AGG | - | chr2_3:65813886-65813905 | Msa0306690:intron | 45.0% | |
| AACCTCATTAGAGAGGTTGC+TGG | - | chr2_3:65813893-65813912 | Msa0306690:intron | 45.0% | |
| ACCTCATTAGAGAGGTTGCT+GGG | - | chr2_3:65813894-65813913 | Msa0306690:intron | 45.0% | |
| TCAGTGATACGCTTCTCGTA+AGG | + | chr2_3:65813926-65813945 | None:intergenic | 45.0% | |
| ATCACTGAGTTGCTCAAGGT+TGG | - | chr2_3:65813938-65813957 | Msa0306690:intron | 45.0% | |
| ACGTGCAAAGAAGAAGAGAG+AGG | - | chr2_3:65814012-65814031 | Msa0306690:intron | 45.0% | |
| AGGAGATGTCTAATGTCCTC+AGG | - | chr2_3:65814032-65814051 | Msa0306690:intron | 45.0% | |
| CTAATGTCCTCAGGAAGATG+AGG | - | chr2_3:65814041-65814060 | Msa0306690:intron | 45.0% | |
| GAACAAACCTCATCTTCCTG+AGG | + | chr2_3:65814051-65814070 | None:intergenic | 45.0% | |
| ! | TCTGAGATCACCGTCACTAC+AGG | - | chr2_3:65813203-65813222 | Msa0306690:three_prime_UTR | 50.0% |
| AGGCCACATCGTCACAAAGA+AGG | - | chr2_3:65813378-65813397 | Msa0306690:three_prime_UTR | 50.0% | |
| ACCCAGCAACCTCTCTAATG+AGG | + | chr2_3:65813898-65813917 | None:intergenic | 50.0% | |
| GCGTATCACTGAGTTGCTCA+AGG | - | chr2_3:65813934-65813953 | Msa0306690:intron | 50.0% | |
| ! | TTTTCAATGTGCAGGGCTGG+TGG | - | chr2_3:65814167-65814186 | Msa0306690:intron | 50.0% |
| ! | TCTGAGATCACCGTCACTAC+AGG | - | chr2_3:65813203-65813222 | Msa0306690:three_prime_UTR | 50.0% |
| AGGCCACATCGTCACAAAGA+AGG | - | chr2_3:65813378-65813397 | Msa0306690:three_prime_UTR | 50.0% | |
| ACCCAGCAACCTCTCTAATG+AGG | + | chr2_3:65813898-65813917 | None:intergenic | 50.0% | |
| GCGTATCACTGAGTTGCTCA+AGG | - | chr2_3:65813934-65813953 | Msa0306690:intron | 50.0% | |
| ! | TTTTCAATGTGCAGGGCTGG+TGG | - | chr2_3:65814167-65814186 | Msa0306690:intron | 50.0% |
| ! | TAACACCAGAGAGAGTGCGG+TGG | + | chr2_3:65813178-65813197 | None:intergenic | 55.0% |
| ACCGCACTCTCTCTGGTGTT+AGG | - | chr2_3:65813177-65813196 | Msa0306690:three_prime_UTR | 55.0% | |
| CCCTAACACCAGAGAGAGTG+CGG | + | chr2_3:65813181-65813200 | None:intergenic | 55.0% | |
| ! | CCGCACTCTCTCTGGTGTTA+GGG | - | chr2_3:65813178-65813197 | Msa0306690:three_prime_UTR | 55.0% |
| ! | GCAAGAGGGTGCACTTTGTG+AGG | - | chr2_3:65813870-65813889 | Msa0306690:intron | 55.0% |
| ! | TAACACCAGAGAGAGTGCGG+TGG | + | chr2_3:65813178-65813197 | None:intergenic | 55.0% |
| ACCGCACTCTCTCTGGTGTT+AGG | - | chr2_3:65813177-65813196 | Msa0306690:three_prime_UTR | 55.0% | |
| CCCTAACACCAGAGAGAGTG+CGG | + | chr2_3:65813181-65813200 | None:intergenic | 55.0% | |
| ! | CCGCACTCTCTCTGGTGTTA+GGG | - | chr2_3:65813178-65813197 | Msa0306690:three_prime_UTR | 55.0% |
| ! | GCAAGAGGGTGCACTTTGTG+AGG | - | chr2_3:65813870-65813889 | Msa0306690:intron | 55.0% |
| ! | CCAGAGAGAGTGCGGTGGAA+TGG | + | chr2_3:65813173-65813192 | None:intergenic | 60.0% |
| CCATTCCACCGCACTCTCTC+TGG | - | chr2_3:65813170-65813189 | Msa0306690:three_prime_UTR | 60.0% | |
| TCCACGTCCTTCAGCTCGCA+AGG | - | chr2_3:65813408-65813427 | Msa0306690:three_prime_UTR | 60.0% | |
| CCACGTCCTTCAGCTCGCAA+GGG | - | chr2_3:65813409-65813428 | Msa0306690:three_prime_UTR | 60.0% | |
| CACGTCCTTCAGCTCGCAAG+GGG | - | chr2_3:65813410-65813429 | Msa0306690:three_prime_UTR | 60.0% | |
| ACGTCCTTCAGCTCGCAAGG+GGG | - | chr2_3:65813411-65813430 | Msa0306690:three_prime_UTR | 60.0% | |
| ! | TCAATGTGCAGGGCTGGTGG+TGG | - | chr2_3:65814170-65814189 | Msa0306690:intron | 60.0% |
| ! | CCAGAGAGAGTGCGGTGGAA+TGG | + | chr2_3:65813173-65813192 | None:intergenic | 60.0% |
| CCATTCCACCGCACTCTCTC+TGG | - | chr2_3:65813170-65813189 | Msa0306690:three_prime_UTR | 60.0% | |
| TCCACGTCCTTCAGCTCGCA+AGG | - | chr2_3:65813408-65813427 | Msa0306690:three_prime_UTR | 60.0% | |
| CCACGTCCTTCAGCTCGCAA+GGG | - | chr2_3:65813409-65813428 | Msa0306690:three_prime_UTR | 60.0% | |
| CACGTCCTTCAGCTCGCAAG+GGG | - | chr2_3:65813410-65813429 | Msa0306690:three_prime_UTR | 60.0% | |
| ACGTCCTTCAGCTCGCAAGG+GGG | - | chr2_3:65813411-65813430 | Msa0306690:three_prime_UTR | 60.0% | |
| ! | TCAATGTGCAGGGCTGGTGG+TGG | - | chr2_3:65814170-65814189 | Msa0306690:intron | 60.0% |
| CCCTTGCGAGCTGAAGGACG+TGG | + | chr2_3:65813412-65813431 | None:intergenic | 65.0% | |
| CTGACCCCCTTGCGAGCTGA+AGG | + | chr2_3:65813418-65813437 | None:intergenic | 65.0% | |
| CCCTTGCGAGCTGAAGGACG+TGG | + | chr2_3:65813412-65813431 | None:intergenic | 65.0% | |
| CTGACCCCCTTGCGAGCTGA+AGG | + | chr2_3:65813418-65813437 | None:intergenic | 65.0% | |
| !! | TGCAGGGCTGGTGGTGGAGC+AGG | - | chr2_3:65814176-65814195 | Msa0306690:intron | 70.0% |
| !! | TGCAGGGCTGGTGGTGGAGC+AGG | - | chr2_3:65814176-65814195 | Msa0306690:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 65813099 | 65814596 | 65813099 | ID=Msa0306690;Name=Msa0306690 |
| chr2_3 | mRNA | 65813099 | 65814596 | 65813099 | ID=Msa0306690-mRNA-1;Parent=Msa0306690;Name=Msa0306690-mRNA-1;_AED=0.06;_eAED=0.06;_QI=131|1|1|1|1|1|4|382|111 |
| chr2_3 | exon | 65813099 | 65813514 | 65813099 | ID=Msa0306690-mRNA-1:exon:21900;Parent=Msa0306690-mRNA-1 |
| chr2_3 | exon | 65813633 | 65813832 | 65813633 | ID=Msa0306690-mRNA-1:exon:21899;Parent=Msa0306690-mRNA-1 |
| chr2_3 | exon | 65814263 | 65814369 | 65814263 | ID=Msa0306690-mRNA-1:exon:21898;Parent=Msa0306690-mRNA-1 |
| chr2_3 | exon | 65814471 | 65814596 | 65814471 | ID=Msa0306690-mRNA-1:exon:21897;Parent=Msa0306690-mRNA-1 |
| chr2_3 | five_prime_UTR | 65814471 | 65814596 | 65814471 | ID=Msa0306690-mRNA-1:five_prime_utr;Parent=Msa0306690-mRNA-1 |
| chr2_3 | five_prime_UTR | 65814365 | 65814369 | 65814365 | ID=Msa0306690-mRNA-1:five_prime_utr;Parent=Msa0306690-mRNA-1 |
| chr2_3 | CDS | 65814263 | 65814364 | 65814263 | ID=Msa0306690-mRNA-1:cds;Parent=Msa0306690-mRNA-1 |
| chr2_3 | CDS | 65813633 | 65813832 | 65813633 | ID=Msa0306690-mRNA-1:cds;Parent=Msa0306690-mRNA-1 |
| chr2_3 | CDS | 65813481 | 65813514 | 65813481 | ID=Msa0306690-mRNA-1:cds;Parent=Msa0306690-mRNA-1 |
| chr2_3 | three_prime_UTR | 65813099 | 65813480 | 65813099 | ID=Msa0306690-mRNA-1:three_prime_utr;Parent=Msa0306690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
