Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748740 | sp|Q9FYQ8|TMN11_ARATH | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748740 | A0A396IID5 | 99.695 | 656 | 2 | 0 | 1 | 656 | 1 | 656 | 0.0 | 1336 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0748740 | Msa0930770 | 0.803852 | 2.860151e-49 | -8.615850e-47 |
| Msa0748740 | Msa1065890 | 0.800906 | 1.156644e-48 | -8.615850e-47 |
| Msa0748740 | Msa1215930 | 0.997920 | 4.915040e-252 | -8.615850e-47 |
| Msa0748740 | Msa1404680 | 0.831153 | 1.961121e-55 | -8.615850e-47 |
| Msa0748740 | Msa1455400 | 0.823073 | 1.685668e-53 | -8.615850e-47 |
| Msa0425310 | Msa0748740 | 0.813019 | 3.163761e-51 | -8.615850e-47 |
| Msa0427420 | Msa0748740 | 0.817401 | 3.360742e-52 | -8.615850e-47 |
| Msa0427480 | Msa0748740 | 0.821488 | 3.930894e-53 | -8.615850e-47 |
| Msa0479420 | Msa0748740 | 0.816379 | 5.701486e-52 | -8.615850e-47 |
| Msa0276860 | Msa0748740 | 0.802415 | 5.671279e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748740 | MtrunA17_Chr4g0065301 | 99.695 | 656 | 2 | 0 | 1 | 656 | 1 | 656 | 0.0 | 1336 |
| Msa0748740 | MtrunA17_Chr3g0120461 | 67.530 | 656 | 201 | 7 | 7 | 656 | 10 | 659 | 0.0 | 882 |
| Msa0748740 | MtrunA17_Chr5g0448371 | 67.085 | 638 | 201 | 7 | 23 | 656 | 33 | 665 | 0.0 | 872 |
| Msa0748740 | MtrunA17_Chr8g0342031 | 44.228 | 667 | 313 | 12 | 10 | 656 | 21 | 648 | 0.0 | 560 |
| Msa0748740 | MtrunA17_Chr1g0150181 | 43.891 | 663 | 314 | 12 | 14 | 656 | 13 | 637 | 0.0 | 543 |
| Msa0748740 | MtrunA17_Chr3g0136881 | 44.697 | 660 | 302 | 13 | 19 | 656 | 18 | 636 | 0.0 | 543 |
| Msa0748740 | MtrunA17_Chr8g0375501 | 27.116 | 638 | 378 | 15 | 32 | 656 | 28 | 591 | 1.55e-80 | 266 |
| Msa0748740 | MtrunA17_Chr5g0434001 | 27.201 | 636 | 381 | 16 | 32 | 656 | 43 | 607 | 4.29e-78 | 260 |
| Msa0748740 | MtrunA17_Chr6g0480551 | 27.969 | 640 | 375 | 17 | 29 | 656 | 23 | 588 | 4.33e-78 | 259 |
| Msa0748740 | MtrunA17_Chr4g0026371 | 28.527 | 638 | 366 | 15 | 32 | 656 | 29 | 589 | 2.27e-71 | 242 |
| Msa0748740 | MtrunA17_Chr8g0380651 | 36.905 | 420 | 247 | 9 | 247 | 656 | 178 | 589 | 9.15e-67 | 229 |
| Msa0748740 | MtrunA17_Chr2g0277491 | 36.930 | 417 | 245 | 9 | 250 | 656 | 175 | 583 | 2.30e-63 | 220 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748740 | AT5G35160.2 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
| Msa0748740 | AT5G35160.3 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
| Msa0748740 | AT5G35160.4 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
| Msa0748740 | AT5G35160.1 | 81.763 | 658 | 90 | 3 | 1 | 656 | 1 | 630 | 0.0 | 1083 |
| Msa0748740 | AT4G12650.1 | 67.593 | 648 | 199 | 6 | 14 | 656 | 11 | 652 | 0.0 | 862 |
| Msa0748740 | AT3G13772.1 | 44.495 | 654 | 304 | 13 | 23 | 656 | 27 | 641 | 0.0 | 555 |
| Msa0748740 | AT5G10840.1 | 43.797 | 669 | 312 | 13 | 13 | 656 | 19 | 648 | 0.0 | 546 |
| Msa0748740 | AT5G25100.1 | 43.498 | 669 | 310 | 13 | 14 | 656 | 18 | 644 | 0.0 | 542 |
| Msa0748740 | AT2G24170.1 | 44.122 | 655 | 307 | 12 | 22 | 656 | 22 | 637 | 0.0 | 540 |
| Msa0748740 | AT5G25100.2 | 43.343 | 676 | 308 | 14 | 14 | 656 | 18 | 651 | 0.0 | 540 |
| Msa0748740 | AT1G55130.1 | 42.511 | 661 | 321 | 12 | 16 | 656 | 16 | 637 | 0.0 | 538 |
| Msa0748740 | AT2G24170.2 | 42.140 | 458 | 211 | 9 | 22 | 462 | 22 | 442 | 5.35e-120 | 365 |
| Msa0748740 | AT2G01970.1 | 27.889 | 649 | 383 | 16 | 20 | 656 | 17 | 592 | 3.13e-84 | 276 |
| Msa0748740 | AT1G08350.3 | 29.376 | 657 | 370 | 19 | 14 | 656 | 13 | 589 | 3.31e-81 | 268 |
| Msa0748740 | AT1G08350.2 | 29.376 | 657 | 370 | 19 | 14 | 656 | 13 | 589 | 3.31e-81 | 268 |
| Msa0748740 | AT1G14670.1 | 28.947 | 646 | 380 | 16 | 20 | 656 | 17 | 592 | 3.19e-80 | 266 |
| Msa0748740 | AT5G37310.1 | 27.717 | 635 | 378 | 15 | 32 | 656 | 30 | 593 | 3.67e-78 | 260 |
| Msa0748740 | AT5G37310.2 | 27.717 | 635 | 378 | 15 | 32 | 656 | 30 | 593 | 3.67e-78 | 260 |
| Msa0748740 | AT1G08350.1 | 28.351 | 582 | 329 | 15 | 88 | 656 | 2 | 508 | 1.41e-67 | 230 |
| Msa0748740 | AT1G08350.4 | 28.881 | 599 | 324 | 19 | 14 | 598 | 13 | 523 | 3.75e-67 | 229 |
| Msa0748740 | AT1G10950.1 | 36.691 | 417 | 246 | 9 | 250 | 656 | 181 | 589 | 9.33e-65 | 224 |
Find 182 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGGTCTCCTCATATTTA+TGG | 0.158373 | 5_2:-2000500 | None:intergenic |
| ATCAAATACAAGATAGTTTA+TGG | 0.166753 | 5_2:-2001771 | None:intergenic |
| CAATCTTGAACTTCCTATTA+TGG | 0.180368 | 5_2:+2001306 | Msa0748740:CDS |
| TTGGGTTCCTCTCTTCATTC+TGG | 0.207220 | 5_2:+2001885 | Msa0748740:CDS |
| GAGGAATTTCTCTAGGAATT+TGG | 0.209657 | 5_2:-2001472 | None:intergenic |
| CCCTGTTGGTATTAAGATTC+AGG | 0.247344 | 5_2:+2000434 | Msa0748740:CDS |
| TCCTTCTTTGTTGTGTATAA+TGG | 0.248630 | 5_2:+2001031 | Msa0748740:CDS |
| TTCTCAGATCCTTCCTTAAC+AGG | 0.259590 | 5_2:-2000567 | None:intergenic |
| GGATCGAGAATTCGCCTTAT+AGG | 0.263740 | 5_2:+2000229 | Msa0748740:CDS |
| ATGGTGATCACTTTCCTTGC+TGG | 0.283624 | 5_2:+2000864 | Msa0748740:CDS |
| GGTGATGGAGTTCAGATTCT+TGG | 0.295289 | 5_2:+2001056 | Msa0748740:CDS |
| ATTTGTTTGGTGTTTCAATC+AGG | 0.295668 | 5_2:+2000015 | Msa0748740:CDS |
| AGCGGCTGGCCTTCTTTAAT+AGG | 0.301449 | 5_2:-2000723 | None:intergenic |
| AATATAACAAAGAGAGAAAA+TGG | 0.302358 | 5_2:-2001353 | None:intergenic |
| TCTTTATCATGTCCAGCATT+TGG | 0.304826 | 5_2:+2001570 | Msa0748740:CDS |
| GACCAATGTGGCTCGTGTTA+TGG | 0.324827 | 5_2:+2000515 | Msa0748740:CDS |
| GGTAAACTATAATAACTAAA+TGG | 0.337219 | 5_2:-2000138 | None:intergenic |
| GGAATTTGGTTGGTTCTAAC+AGG | 0.337867 | 5_2:-2001458 | None:intergenic |
| TACTTTGGCTTCCCCATAAT+AGG | 0.338322 | 5_2:-2001319 | None:intergenic |
| AATCTTGAACTTCCTATTAT+GGG | 0.344499 | 5_2:+2001307 | Msa0748740:CDS |
| TGTTTCTGCAACTCTGTACT+TGG | 0.345457 | 5_2:+2001814 | Msa0748740:CDS |
| CTGGGTCATGGCTATTTGTT+TGG | 0.351997 | 5_2:+2000002 | Msa0748740:CDS |
| TTGTTATATTGCTATTGCTT+TGG | 0.352574 | 5_2:+2001366 | Msa0748740:CDS |
| TTATCTTCTTGAGAACTGTT+AGG | 0.357759 | 5_2:+2000898 | Msa0748740:CDS |
| GTAAACATCTTAAACCTATA+AGG | 0.359924 | 5_2:-2000243 | None:intergenic |
| GGGTATGGTTTCTACCTTCC+GGG | 0.364387 | 5_2:+2000036 | Msa0748740:CDS |
| ACCAATGTGGCTCGTGTTAT+GGG | 0.372249 | 5_2:+2000516 | Msa0748740:CDS |
| CACAACAAAGAAGGATTTGA+TGG | 0.373080 | 5_2:-2001023 | None:intergenic |
| GGTGCTGGCACCCTTCCCTT+TGG | 0.373371 | 5_2:+2001527 | Msa0748740:CDS |
| TCCTGAATCTTAATACCAAC+AGG | 0.375336 | 5_2:-2000435 | None:intergenic |
| CTTATCAAGCTCCTCATAAC+TGG | 0.375567 | 5_2:-2000931 | None:intergenic |
| CTCGATCCTCAATTCGTTGA+TGG | 0.377219 | 5_2:+2000845 | Msa0748740:CDS |
| ACACTTGTTGGTGGCTACTT+TGG | 0.378171 | 5_2:+2001410 | Msa0748740:CDS |
| GTCGATGGATCACATTTAAT+AGG | 0.380805 | 5_2:-2000690 | None:intergenic |
| CTTGGGATACTCACTCTTCA+TGG | 0.381798 | 5_2:+2001832 | Msa0748740:CDS |
| TCTGTCCCACTTACACTTGT+TGG | 0.386331 | 5_2:+2001398 | Msa0748740:CDS |
| TGGAAATCATTCTTTGCCTC+TGG | 0.395692 | 5_2:+2001719 | Msa0748740:CDS |
| GTGATGGAGTTCAGATTCTT+GGG | 0.403271 | 5_2:+2001057 | Msa0748740:CDS |
| TATCATGTCCAGCATTTGGA+TGG | 0.407267 | 5_2:+2001574 | Msa0748740:CDS |
| TACCCACACAATTATGCAAT+TGG | 0.410515 | 5_2:+2000063 | Msa0748740:CDS |
| GTACATGGTTGTTGGGTTTG+AGG | 0.411511 | 5_2:+2000596 | Msa0748740:CDS |
| TAAAGAACAGCTCAATGAAA+AGG | 0.422226 | 5_2:-2001553 | None:intergenic |
| TGGTTGGAAGCTTGTGGTGG+GGG | 0.425246 | 5_2:+2000986 | Msa0748740:CDS |
| AAGCCGGGGTACATGGTTGT+TGG | 0.426097 | 5_2:+2000588 | Msa0748740:CDS |
| GTGCGGCGATCAGAAGGGTT+GGG | 0.426321 | 5_2:+2001226 | Msa0748740:CDS |
| AGCCGGGGTACATGGTTGTT+GGG | 0.426832 | 5_2:+2000589 | Msa0748740:CDS |
| ATATCAAGTGGCCATCTAGA+TGG | 0.430148 | 5_2:+2000781 | Msa0748740:CDS |
| TCTGGTTGGAAGCTTGTGGT+GGG | 0.432889 | 5_2:+2000984 | Msa0748740:CDS |
| AAGTACAGAGTTGCAGAAAC+AGG | 0.445695 | 5_2:-2001812 | None:intergenic |
| CAGATGAATGAGGAGTTATC+TGG | 0.450439 | 5_2:+2000966 | Msa0748740:CDS |
| ATCTGGTTGGAAGCTTGTGG+TGG | 0.453164 | 5_2:+2000983 | Msa0748740:CDS |
| ACAATATTGTTTGCTGCACT+TGG | 0.457516 | 5_2:+2001092 | Msa0748740:CDS |
| ATGGAATGGCTCCTGTACTT+TGG | 0.461027 | 5_2:-2001334 | None:intergenic |
| TTGGTGTTTCAATCAGGGTA+TGG | 0.463389 | 5_2:+2000021 | Msa0748740:CDS |
| TGCACCTCTGTGTGGAGGAT+TGG | 0.467543 | 5_2:+2001687 | Msa0748740:CDS |
| TCTTCTGTGAAGTTGGATTG+AGG | 0.467795 | 5_2:+2001926 | Msa0748740:CDS |
| ATCTGAGAAGCCGGGGTACA+TGG | 0.468660 | 5_2:+2000581 | Msa0748740:CDS |
| AGGGTATGGTTTCTACCTTC+CGG | 0.473489 | 5_2:+2000035 | Msa0748740:CDS |
| GAGGGATCTGGCCAGTTATG+AGG | 0.477456 | 5_2:+2000920 | Msa0748740:CDS |
| GAGGATGAAGAAGGCAATAC+CGG | 0.480232 | 5_2:-2001282 | None:intergenic |
| TGTTCTTGTCCATAAATATG+AGG | 0.481033 | 5_2:+2000491 | Msa0748740:CDS |
| AGGGTTGGGTTTCAGTTGCA+TGG | 0.484208 | 5_2:+2001240 | Msa0748740:CDS |
| AAGTAAGCATCCCATCTAGA+TGG | 0.484918 | 5_2:-2000792 | None:intergenic |
| CGTGCGGCGATCAGAAGGGT+TGG | 0.485992 | 5_2:+2001225 | Msa0748740:CDS |
| AAGGATAGTGCTGAGAATCT+AGG | 0.486339 | 5_2:+2000186 | Msa0748740:CDS |
| GTCCCACTTACACTTGTTGG+TGG | 0.488890 | 5_2:+2001401 | Msa0748740:CDS |
| TTTGTTTGGTGTTTCAATCA+GGG | 0.489983 | 5_2:+2000016 | Msa0748740:CDS |
| CAAATTCAAATTCTGGGTCA+TGG | 0.490284 | 5_2:+1999990 | Msa0748740:CDS |
| TTGTGTATAATGGTTGGTGA+TGG | 0.492346 | 5_2:+2001041 | Msa0748740:CDS |
| ACTCGCGTGCGGCGATCAGA+AGG | 0.493442 | 5_2:+2001220 | Msa0748740:CDS |
| TACCTACGAGGTAACGTTTG+AGG | 0.495432 | 5_2:+2000752 | Msa0748740:CDS |
| ATGGGATGCTTACTTGAAGA+TGG | 0.497074 | 5_2:+2000800 | Msa0748740:CDS |
| CAGTTATGAGGAGCTTGATA+AGG | 0.497655 | 5_2:+2000932 | Msa0748740:CDS |
| ATGATACTTGGTATTGCTGC+TGG | 0.498593 | 5_2:+2001170 | Msa0748740:CDS |
| CTCAATGAAAAGGGTTCCAA+AGG | 0.503492 | 5_2:-2001543 | None:intergenic |
| GATCGAGAACCAATGGACTT+TGG | 0.504056 | 5_2:-2000829 | None:intergenic |
| TGTTGGTGACAGGCACAGTT+GGG | 0.507832 | 5_2:+2001867 | Msa0748740:CDS |
| AAAGCTGCTTGTTTCTTCCC+CGG | 0.509099 | 5_2:+2001263 | Msa0748740:CDS |
| TGCAATTGGTGATGAATTGT+CGG | 0.510847 | 5_2:+2000077 | Msa0748740:CDS |
| TGGAGGATTGGAGATGGTGG+TGG | 0.512530 | 5_2:+2001699 | Msa0748740:CDS |
| CAAGAACATTAAATCTAAGA+TGG | 0.515293 | 5_2:-2000476 | None:intergenic |
| CTAGCAATCATGTTGGTGAC+AGG | 0.515495 | 5_2:+2001857 | Msa0748740:CDS |
| GAGAACTGTTAGGAGGGATC+TGG | 0.516130 | 5_2:+2000908 | Msa0748740:CDS |
| GAATCTAGGTGAGCTTCTCA+TGG | 0.516684 | 5_2:+2000200 | Msa0748740:CDS |
| AAAGAACAGCTCAATGAAAA+GGG | 0.520078 | 5_2:-2001552 | None:intergenic |
| TCTTGTGGTGGTTTGTGCTG+AGG | 0.521715 | 5_2:+2001643 | Msa0748740:CDS |
| TAGCCACCAACAAGTGTAAG+TGG | 0.522399 | 5_2:-2001404 | None:intergenic |
| GTGGCTCGTGTTATGGGAAC+CGG | 0.523916 | 5_2:+2000522 | Msa0748740:CDS |
| ACCTGTGATAAGTGTTCCAC+GGG | 0.526211 | 5_2:-2001132 | None:intergenic |
| TGATCACCATCAACGAATTG+AGG | 0.527193 | 5_2:-2000851 | None:intergenic |
| TTCATGTCACCGGCCTCCCG+TGG | 0.527959 | 5_2:+2001116 | Msa0748740:CDS |
| AACACGGCCCATCCAAATGC+TGG | 0.527959 | 5_2:-2001582 | None:intergenic |
| AAGGAAGGATCTGAGAAGCC+GGG | 0.528711 | 5_2:+2000573 | Msa0748740:CDS |
| AATTTCTCTAGGAATTTGGT+TGG | 0.529324 | 5_2:-2001468 | None:intergenic |
| ATAAGTGTTCCACGGGAGGC+CGG | 0.530499 | 5_2:-2001125 | None:intergenic |
| ACCATTATACACAACAAAGA+AGG | 0.534847 | 5_2:-2001032 | None:intergenic |
| CTGGTTGGAAGCTTGTGGTG+GGG | 0.535511 | 5_2:+2000985 | Msa0748740:CDS |
| AATCATCTCAGCCGCATCAC+CGG | 0.536909 | 5_2:-2000541 | None:intergenic |
| TCTTTGTTGTGTATAATGGT+TGG | 0.537010 | 5_2:+2001035 | Msa0748740:CDS |
| TCACCAATTGCATAATTGTG+TGG | 0.538717 | 5_2:-2000066 | None:intergenic |
| CTTCTTGAGAACTGTTAGGA+GGG | 0.539675 | 5_2:+2000902 | Msa0748740:CDS |
| ATAGGCATTGCCACAGTCGA+TGG | 0.540885 | 5_2:-2000705 | None:intergenic |
| CGCTGCTGAGGAATTTCTCT+AGG | 0.541640 | 5_2:-2001479 | None:intergenic |
| TAAGGAAGGATCTGAGAAGC+CGG | 0.543364 | 5_2:+2000572 | Msa0748740:CDS |
| TCTTCTTGAGAACTGTTAGG+AGG | 0.545064 | 5_2:+2000901 | Msa0748740:CDS |
| AGGATGAAGAAGGCAATACC+GGG | 0.546046 | 5_2:-2001281 | None:intergenic |
| ATCATGTCCAGCATTTGGAT+GGG | 0.548416 | 5_2:+2001575 | Msa0748740:CDS |
| TATCAAGTGGCCATCTAGAT+GGG | 0.549497 | 5_2:+2000782 | Msa0748740:CDS |
| GGATCACATTTAATAGGTGA+CGG | 0.552812 | 5_2:-2000684 | None:intergenic |
| TGGTGGCTACTTTGGAGCAA+AGG | 0.554397 | 5_2:+2001418 | Msa0748740:CDS |
| AATCTAGGTGAGCTTCTCAT+GGG | 0.557996 | 5_2:+2000201 | Msa0748740:CDS |
| ATGTTGGTGACAGGCACAGT+TGG | 0.557996 | 5_2:+2001866 | Msa0748740:CDS |
| GGATGCTTACTTGAAGATGG+AGG | 0.561604 | 5_2:+2000803 | Msa0748740:CDS |
| TTCTTCGTAAAACGAATAGC+AGG | 0.562872 | 5_2:-2000381 | None:intergenic |
| TGGAGGGAGCCAAAGTCCAT+TGG | 0.566645 | 5_2:+2000820 | Msa0748740:CDS |
| TGAAAAGGGTTCCAAAGGGA+AGG | 0.570056 | 5_2:-2001538 | None:intergenic |
| CACCAATTGCATAATTGTGT+GGG | 0.570143 | 5_2:-2000065 | None:intergenic |
| TCTCAGATCCTTCCTTAACA+GGG | 0.572609 | 5_2:-2000566 | None:intergenic |
| TGGAGTTCAGATTCTTGGGA+TGG | 0.573301 | 5_2:+2001061 | Msa0748740:CDS |
| GTGGCAATGCCTATTAAAGA+AGG | 0.576450 | 5_2:+2000714 | Msa0748740:CDS |
| GATCACATTTAATAGGTGAC+GGG | 0.577005 | 5_2:-2000683 | None:intergenic |
| GTGTGGAGGATTGGAGATGG+TGG | 0.579374 | 5_2:+2001696 | Msa0748740:CDS |
| CAAGATTGTGAGGATGAAGA+AGG | 0.582999 | 5_2:-2001291 | None:intergenic |
| GATGTTTACTAATGAGTCTG+AGG | 0.583355 | 5_2:+2000257 | Msa0748740:CDS |
| GTTATCTGGTTGGAAGCTTG+TGG | 0.588427 | 5_2:+2000980 | Msa0748740:CDS |
| TCCCATAACACGAGCCACAT+TGG | 0.588765 | 5_2:-2000517 | None:intergenic |
| TGCACTTGGATTCATGTCAC+CGG | 0.589020 | 5_2:+2001106 | Msa0748740:CDS |
| GTTTCTGCAACTCTGTACTT+GGG | 0.589552 | 5_2:+2001815 | Msa0748740:CDS |
| AGATGGACTGGGTACCCTGT+TGG | 0.591209 | 5_2:+2000420 | Msa0748740:CDS |
| ATCTTGAACTTCCTATTATG+GGG | 0.592990 | 5_2:+2001308 | Msa0748740:CDS |
| TTATGGGGAAGCCAAAGTAC+AGG | 0.594384 | 5_2:+2001323 | Msa0748740:CDS |
| AATTGAGGATCGAGAACCAA+TGG | 0.597715 | 5_2:-2000836 | None:intergenic |
| GTTATGTTTCAGTTCGACTG+TGG | 0.597723 | 5_2:+2001192 | Msa0748740:CDS |
| TCCCGTGGAACACTTATCAC+AGG | 0.598031 | 5_2:+2001131 | Msa0748740:CDS |
| CTCGCGTGCGGCGATCAGAA+GGG | 0.598186 | 5_2:+2001221 | Msa0748740:CDS |
| CATGGTTCTAGCAATCATGT+TGG | 0.600699 | 5_2:+2001850 | Msa0748740:CDS |
| AAGAAGGATTTGATGGAGCA+CGG | 0.601804 | 5_2:-2001016 | None:intergenic |
| TACCTGTGATAAGTGTTCCA+CGG | 0.602595 | 5_2:-2001133 | None:intergenic |
| TCAATGAAAAGGGTTCCAAA+GGG | 0.608377 | 5_2:-2001542 | None:intergenic |
| TAATTGTGTGGGTAACTACC+CGG | 0.608773 | 5_2:-2000054 | None:intergenic |
| AACAAAGAGAGAAAATGGAA+TGG | 0.610331 | 5_2:-2001348 | None:intergenic |
| AGCTCAAGCACAGATGAATG+AGG | 0.617907 | 5_2:+2000956 | Msa0748740:CDS |
| CTCAGATCCTTCCTTAACAG+GGG | 0.621573 | 5_2:-2000565 | None:intergenic |
| ATCTAGGTGAGCTTCTCATG+GGG | 0.627364 | 5_2:+2000202 | Msa0748740:CDS |
| TCTGTGTGGAGGATTGGAGA+TGG | 0.630692 | 5_2:+2001693 | Msa0748740:CDS |
| CACGACGGATACCGCTGCTG+AGG | 0.631043 | 5_2:-2001491 | None:intergenic |
| GATGCTTACTTGAAGATGGA+GGG | 0.631078 | 5_2:+2000804 | Msa0748740:CDS |
| GAAAAGGGTTCCAAAGGGAA+GGG | 0.631885 | 5_2:-2001537 | None:intergenic |
| TGAATGAGGAGTTATCTGGT+TGG | 0.637187 | 5_2:+2000970 | Msa0748740:CDS |
| TCAGATCCTTCCTTAACAGG+GGG | 0.637373 | 5_2:-2000564 | None:intergenic |
| TGTGATAAGTGTTCCACGGG+AGG | 0.637733 | 5_2:-2001129 | None:intergenic |
| TGGTTCTAACAGGATACTCA+AGG | 0.638465 | 5_2:-2001448 | None:intergenic |
| CTCAGCAGCGGTATCCGTCG+TGG | 0.639819 | 5_2:+2001492 | Msa0748740:CDS |
| ACCCGAAAACATAGTAAACA+CGG | 0.641523 | 5_2:-2001598 | None:intergenic |
| TTGAGGAGAGTGATATCAAG+TGG | 0.642653 | 5_2:+2000769 | Msa0748740:CDS |
| GCATTATGCATAATACTACA+AGG | 0.643881 | 5_2:-2000624 | None:intergenic |
| ATAGGAAGTTCAAGATTGTG+AGG | 0.645085 | 5_2:-2001301 | None:intergenic |
| AACCCAACAACCATGTACCC+CGG | 0.645248 | 5_2:-2000591 | None:intergenic |
| CTAGAGAAATTCCTCAGCAG+CGG | 0.650903 | 5_2:+2001480 | Msa0748740:CDS |
| TTACATGCACCTCTGTGTGG+AGG | 0.651300 | 5_2:+2001682 | Msa0748740:CDS |
| AACTTACATGCACCTCTGTG+TGG | 0.652266 | 5_2:+2001679 | Msa0748740:CDS |
| CTCCTCAAACGTTACCTCGT+AGG | 0.655284 | 5_2:-2000754 | None:intergenic |
| AGGAAGGATCTGAGAAGCCG+GGG | 0.657385 | 5_2:+2000574 | Msa0748740:CDS |
| AGCCACCAACAAGTGTAAGT+GGG | 0.658396 | 5_2:-2001403 | None:intergenic |
| ACCTCGTAGGTAAACGCAAG+CGG | 0.659065 | 5_2:-2000741 | None:intergenic |
| TGGTGATGAATTGTCGGTGA+AGG | 0.659099 | 5_2:+2000083 | Msa0748740:CDS |
| GCCGCTTGCGTTTACCTACG+AGG | 0.660211 | 5_2:+2000740 | Msa0748740:CDS |
| ACACGAACCAGAATGAAGAG+AGG | 0.661550 | 5_2:-2001892 | None:intergenic |
| TGTTATGGGAACCGGTGATG+CGG | 0.663081 | 5_2:+2000530 | Msa0748740:CDS |
| TAACAAGAACAATACCAGCA+AGG | 0.672966 | 5_2:-2000878 | None:intergenic |
| CTAACAGGATACTCAAGGTG+AGG | 0.675817 | 5_2:-2001443 | None:intergenic |
| TTTGATCTCAAGAATCTGAG+TGG | 0.676176 | 5_2:+2001788 | Msa0748740:CDS |
| CTGTGGAGAACACTCGCGTG+CGG | 0.676822 | 5_2:+2001209 | Msa0748740:CDS |
| CCTGAATCTTAATACCAACA+GGG | 0.677762 | 5_2:-2000434 | None:intergenic |
| GTACAGTGCAACAGAACCAG+AGG | 0.685889 | 5_2:-2001735 | None:intergenic |
| TAAATGTGATCCATCGACTG+TGG | 0.688100 | 5_2:+2000695 | Msa0748740:CDS |
| CCTAGAACTAAAAGCCACGA+CGG | 0.690997 | 5_2:-2001506 | None:intergenic |
| TGTGTGGGTAACTACCCGGA+AGG | 0.693942 | 5_2:-2000050 | None:intergenic |
| TCTAGGTGAGCTTCTCATGG+GGG | 0.697948 | 5_2:+2000203 | Msa0748740:CDS |
| TAAATATGAGGAGACCAATG+TGG | 0.708708 | 5_2:+2000503 | Msa0748740:CDS |
| ATCTCCAATCCTCCACACAG+AGG | 0.744593 | 5_2:-2001691 | None:intergenic |
| GGATGAAGAAGGCAATACCG+GGG | 0.767636 | 5_2:-2001280 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCACAAATTCAAATTCT+GGG | + | chr5_2:1999984-2000003 | Msa0748740:CDS | 20.0% |
| !! | GGTAAACTATAATAACTAAA+TGG | - | chr5_2:2000141-2000160 | None:intergenic | 20.0% |
| !! | AATATAACAAAGAGAGAAAA+TGG | - | chr5_2:2001356-2001375 | None:intergenic | 20.0% |
| !! | ATCAAATACAAGATAGTTTA+TGG | - | chr5_2:2001774-2001793 | None:intergenic | 20.0% |
| !!! | TTTTCACAAATTCAAATTCT+GGG | + | chr5_2:1999984-2000003 | Msa0748740:CDS | 20.0% |
| !! | GGTAAACTATAATAACTAAA+TGG | - | chr5_2:2000141-2000160 | None:intergenic | 20.0% |
| !! | AATATAACAAAGAGAGAAAA+TGG | - | chr5_2:2001356-2001375 | None:intergenic | 20.0% |
| !! | ATCAAATACAAGATAGTTTA+TGG | - | chr5_2:2001774-2001793 | None:intergenic | 20.0% |
| !! | CTTTTCACAAATTCAAATTC+TGG | + | chr5_2:1999983-2000002 | Msa0748740:CDS | 25.0% |
| ! | GTAAACATCTTAAACCTATA+AGG | - | chr5_2:2000246-2000265 | None:intergenic | 25.0% |
| ! | CAAGAACATTAAATCTAAGA+TGG | - | chr5_2:2000479-2000498 | None:intergenic | 25.0% |
| ! | AATCTTGAACTTCCTATTAT+GGG | + | chr5_2:2001307-2001326 | Msa0748740:CDS | 25.0% |
| !! | TTGTTATATTGCTATTGCTT+TGG | + | chr5_2:2001366-2001385 | Msa0748740:CDS | 25.0% |
| !! | CTTTTCACAAATTCAAATTC+TGG | + | chr5_2:1999983-2000002 | Msa0748740:CDS | 25.0% |
| ! | GTAAACATCTTAAACCTATA+AGG | - | chr5_2:2000246-2000265 | None:intergenic | 25.0% |
| ! | CAAGAACATTAAATCTAAGA+TGG | - | chr5_2:2000479-2000498 | None:intergenic | 25.0% |
| ! | AATCTTGAACTTCCTATTAT+GGG | + | chr5_2:2001307-2001326 | Msa0748740:CDS | 25.0% |
| !! | TTGTTATATTGCTATTGCTT+TGG | + | chr5_2:2001366-2001385 | Msa0748740:CDS | 25.0% |
| !! | ATTTGTTTGGTGTTTCAATC+AGG | + | chr5_2:2000015-2000034 | Msa0748740:CDS | 30.0% |
| !! | TTTGTTTGGTGTTTCAATCA+GGG | + | chr5_2:2000016-2000035 | Msa0748740:CDS | 30.0% |
| ! | TTACCTTTTTGTAAACCTCA+AGG | + | chr5_2:2000156-2000175 | Msa0748740:CDS | 30.0% |
| ! | TACCTTTTTGTAAACCTCAA+GGG | + | chr5_2:2000157-2000176 | Msa0748740:CDS | 30.0% |
| AGTTCAAGATCTTGAAAAAG+AGG | + | chr5_2:2000316-2000335 | Msa0748740:CDS | 30.0% | |
| !! | AAGATGAGTACTTTTTGAGA+TGG | + | chr5_2:2000403-2000422 | Msa0748740:CDS | 30.0% |
| TGTTCTTGTCCATAAATATG+AGG | + | chr5_2:2000491-2000510 | Msa0748740:CDS | 30.0% | |
| GCATTATGCATAATACTACA+AGG | - | chr5_2:2000627-2000646 | None:intergenic | 30.0% | |
| TTATCTTCTTGAGAACTGTT+AGG | + | chr5_2:2000898-2000917 | Msa0748740:CDS | 30.0% | |
| ! | TCCTTCTTTGTTGTGTATAA+TGG | + | chr5_2:2001031-2001050 | Msa0748740:CDS | 30.0% |
| ACCATTATACACAACAAAGA+AGG | - | chr5_2:2001035-2001054 | None:intergenic | 30.0% | |
| ! | TCTTTGTTGTGTATAATGGT+TGG | + | chr5_2:2001035-2001054 | Msa0748740:CDS | 30.0% |
| !! | CTGTTTTTCTACATGATACT+TGG | + | chr5_2:2001158-2001177 | Msa0748740:CDS | 30.0% |
| CAATCTTGAACTTCCTATTA+TGG | + | chr5_2:2001306-2001325 | Msa0748740:CDS | 30.0% | |
| ATCTTGAACTTCCTATTATG+GGG | + | chr5_2:2001308-2001327 | Msa0748740:CDS | 30.0% | |
| AACAAAGAGAGAAAATGGAA+TGG | - | chr5_2:2001351-2001370 | None:intergenic | 30.0% | |
| ! | AATTTCTCTAGGAATTTGGT+TGG | - | chr5_2:2001471-2001490 | None:intergenic | 30.0% |
| AAAGAACAGCTCAATGAAAA+GGG | - | chr5_2:2001555-2001574 | None:intergenic | 30.0% | |
| TAAAGAACAGCTCAATGAAA+AGG | - | chr5_2:2001556-2001575 | None:intergenic | 30.0% | |
| !!! | CATTGTTTTGATTCTTCTTG+TGG | + | chr5_2:2001628-2001647 | Msa0748740:CDS | 30.0% |
| !! | ATTTGTTTGGTGTTTCAATC+AGG | + | chr5_2:2000015-2000034 | Msa0748740:CDS | 30.0% |
| !! | TTTGTTTGGTGTTTCAATCA+GGG | + | chr5_2:2000016-2000035 | Msa0748740:CDS | 30.0% |
| ! | TTACCTTTTTGTAAACCTCA+AGG | + | chr5_2:2000156-2000175 | Msa0748740:CDS | 30.0% |
| ! | TACCTTTTTGTAAACCTCAA+GGG | + | chr5_2:2000157-2000176 | Msa0748740:CDS | 30.0% |
| AGTTCAAGATCTTGAAAAAG+AGG | + | chr5_2:2000316-2000335 | Msa0748740:CDS | 30.0% | |
| !! | AAGATGAGTACTTTTTGAGA+TGG | + | chr5_2:2000403-2000422 | Msa0748740:CDS | 30.0% |
| TGTTCTTGTCCATAAATATG+AGG | + | chr5_2:2000491-2000510 | Msa0748740:CDS | 30.0% | |
| GCATTATGCATAATACTACA+AGG | - | chr5_2:2000627-2000646 | None:intergenic | 30.0% | |
| TTATCTTCTTGAGAACTGTT+AGG | + | chr5_2:2000898-2000917 | Msa0748740:CDS | 30.0% | |
| ! | TCCTTCTTTGTTGTGTATAA+TGG | + | chr5_2:2001031-2001050 | Msa0748740:CDS | 30.0% |
| ACCATTATACACAACAAAGA+AGG | - | chr5_2:2001035-2001054 | None:intergenic | 30.0% | |
| ! | TCTTTGTTGTGTATAATGGT+TGG | + | chr5_2:2001035-2001054 | Msa0748740:CDS | 30.0% |
| !! | CTGTTTTTCTACATGATACT+TGG | + | chr5_2:2001158-2001177 | Msa0748740:CDS | 30.0% |
| CAATCTTGAACTTCCTATTA+TGG | + | chr5_2:2001306-2001325 | Msa0748740:CDS | 30.0% | |
| ATCTTGAACTTCCTATTATG+GGG | + | chr5_2:2001308-2001327 | Msa0748740:CDS | 30.0% | |
| AACAAAGAGAGAAAATGGAA+TGG | - | chr5_2:2001351-2001370 | None:intergenic | 30.0% | |
| ! | AATTTCTCTAGGAATTTGGT+TGG | - | chr5_2:2001471-2001490 | None:intergenic | 30.0% |
| AAAGAACAGCTCAATGAAAA+GGG | - | chr5_2:2001555-2001574 | None:intergenic | 30.0% | |
| TAAAGAACAGCTCAATGAAA+AGG | - | chr5_2:2001556-2001575 | None:intergenic | 30.0% | |
| !!! | CATTGTTTTGATTCTTCTTG+TGG | + | chr5_2:2001628-2001647 | Msa0748740:CDS | 30.0% |
| CAAATTCAAATTCTGGGTCA+TGG | + | chr5_2:1999990-2000009 | Msa0748740:CDS | 35.0% | |
| TACCCACACAATTATGCAAT+TGG | + | chr5_2:2000063-2000082 | Msa0748740:CDS | 35.0% | |
| CACCAATTGCATAATTGTGT+GGG | - | chr5_2:2000068-2000087 | None:intergenic | 35.0% | |
| TCACCAATTGCATAATTGTG+TGG | - | chr5_2:2000069-2000088 | None:intergenic | 35.0% | |
| !! | TGCAATTGGTGATGAATTGT+CGG | + | chr5_2:2000077-2000096 | Msa0748740:CDS | 35.0% |
| ! | ACCTTTTTGTAAACCTCAAG+GGG | + | chr5_2:2000158-2000177 | Msa0748740:CDS | 35.0% |
| GATGTTTACTAATGAGTCTG+AGG | + | chr5_2:2000257-2000276 | Msa0748740:CDS | 35.0% | |
| TTCTTCGTAAAACGAATAGC+AGG | - | chr5_2:2000384-2000403 | None:intergenic | 35.0% | |
| !!! | AGTACTTTTTGAGATGGACT+GGG | + | chr5_2:2000409-2000428 | Msa0748740:CDS | 35.0% |
| CCTGAATCTTAATACCAACA+GGG | - | chr5_2:2000437-2000456 | None:intergenic | 35.0% | |
| TCCTGAATCTTAATACCAAC+AGG | - | chr5_2:2000438-2000457 | None:intergenic | 35.0% | |
| ! | CATTGGTCTCCTCATATTTA+TGG | - | chr5_2:2000503-2000522 | None:intergenic | 35.0% |
| TAAATATGAGGAGACCAATG+TGG | + | chr5_2:2000503-2000522 | Msa0748740:CDS | 35.0% | |
| GATCACATTTAATAGGTGAC+GGG | - | chr5_2:2000686-2000705 | None:intergenic | 35.0% | |
| GGATCACATTTAATAGGTGA+CGG | - | chr5_2:2000687-2000706 | None:intergenic | 35.0% | |
| GTCGATGGATCACATTTAAT+AGG | - | chr5_2:2000693-2000712 | None:intergenic | 35.0% | |
| TAACAAGAACAATACCAGCA+AGG | - | chr5_2:2000881-2000900 | None:intergenic | 35.0% | |
| CACAACAAAGAAGGATTTGA+TGG | - | chr5_2:2001026-2001045 | None:intergenic | 35.0% | |
| !! | TTGTGTATAATGGTTGGTGA+TGG | + | chr5_2:2001041-2001060 | Msa0748740:CDS | 35.0% |
| ! | ACAATATTGTTTGCTGCACT+TGG | + | chr5_2:2001092-2001111 | Msa0748740:CDS | 35.0% |
| ATAGGAAGTTCAAGATTGTG+AGG | - | chr5_2:2001304-2001323 | None:intergenic | 35.0% | |
| ! | GAGGAATTTCTCTAGGAATT+TGG | - | chr5_2:2001475-2001494 | None:intergenic | 35.0% |
| TCAATGAAAAGGGTTCCAAA+GGG | - | chr5_2:2001545-2001564 | None:intergenic | 35.0% | |
| TCTTTATCATGTCCAGCATT+TGG | + | chr5_2:2001570-2001589 | Msa0748740:CDS | 35.0% | |
| ACCCGAAAACATAGTAAACA+CGG | - | chr5_2:2001601-2001620 | None:intergenic | 35.0% | |
| !!! | TGTTTTGATTCTTCTTGTGG+TGG | + | chr5_2:2001631-2001650 | Msa0748740:CDS | 35.0% |
| TTTGATCTCAAGAATCTGAG+TGG | + | chr5_2:2001788-2001807 | Msa0748740:CDS | 35.0% | |
| !! | CTTGTTTTCTTCTGTGAAGT+TGG | + | chr5_2:2001919-2001938 | Msa0748740:CDS | 35.0% |
| CAAATTCAAATTCTGGGTCA+TGG | + | chr5_2:1999990-2000009 | Msa0748740:CDS | 35.0% | |
| TACCCACACAATTATGCAAT+TGG | + | chr5_2:2000063-2000082 | Msa0748740:CDS | 35.0% | |
| CACCAATTGCATAATTGTGT+GGG | - | chr5_2:2000068-2000087 | None:intergenic | 35.0% | |
| TCACCAATTGCATAATTGTG+TGG | - | chr5_2:2000069-2000088 | None:intergenic | 35.0% | |
| !! | TGCAATTGGTGATGAATTGT+CGG | + | chr5_2:2000077-2000096 | Msa0748740:CDS | 35.0% |
| ! | ACCTTTTTGTAAACCTCAAG+GGG | + | chr5_2:2000158-2000177 | Msa0748740:CDS | 35.0% |
| GATGTTTACTAATGAGTCTG+AGG | + | chr5_2:2000257-2000276 | Msa0748740:CDS | 35.0% | |
| TTCTTCGTAAAACGAATAGC+AGG | - | chr5_2:2000384-2000403 | None:intergenic | 35.0% | |
| !!! | AGTACTTTTTGAGATGGACT+GGG | + | chr5_2:2000409-2000428 | Msa0748740:CDS | 35.0% |
| CCTGAATCTTAATACCAACA+GGG | - | chr5_2:2000437-2000456 | None:intergenic | 35.0% | |
| TCCTGAATCTTAATACCAAC+AGG | - | chr5_2:2000438-2000457 | None:intergenic | 35.0% | |
| ! | CATTGGTCTCCTCATATTTA+TGG | - | chr5_2:2000503-2000522 | None:intergenic | 35.0% |
| TAAATATGAGGAGACCAATG+TGG | + | chr5_2:2000503-2000522 | Msa0748740:CDS | 35.0% | |
| GATCACATTTAATAGGTGAC+GGG | - | chr5_2:2000686-2000705 | None:intergenic | 35.0% | |
| GGATCACATTTAATAGGTGA+CGG | - | chr5_2:2000687-2000706 | None:intergenic | 35.0% | |
| GTCGATGGATCACATTTAAT+AGG | - | chr5_2:2000693-2000712 | None:intergenic | 35.0% | |
| TAACAAGAACAATACCAGCA+AGG | - | chr5_2:2000881-2000900 | None:intergenic | 35.0% | |
| CACAACAAAGAAGGATTTGA+TGG | - | chr5_2:2001026-2001045 | None:intergenic | 35.0% | |
| !! | TTGTGTATAATGGTTGGTGA+TGG | + | chr5_2:2001041-2001060 | Msa0748740:CDS | 35.0% |
| ! | ACAATATTGTTTGCTGCACT+TGG | + | chr5_2:2001092-2001111 | Msa0748740:CDS | 35.0% |
| ATAGGAAGTTCAAGATTGTG+AGG | - | chr5_2:2001304-2001323 | None:intergenic | 35.0% | |
| ! | GAGGAATTTCTCTAGGAATT+TGG | - | chr5_2:2001475-2001494 | None:intergenic | 35.0% |
| TCAATGAAAAGGGTTCCAAA+GGG | - | chr5_2:2001545-2001564 | None:intergenic | 35.0% | |
| TCTTTATCATGTCCAGCATT+TGG | + | chr5_2:2001570-2001589 | Msa0748740:CDS | 35.0% | |
| ACCCGAAAACATAGTAAACA+CGG | - | chr5_2:2001601-2001620 | None:intergenic | 35.0% | |
| !!! | TGTTTTGATTCTTCTTGTGG+TGG | + | chr5_2:2001631-2001650 | Msa0748740:CDS | 35.0% |
| TTTGATCTCAAGAATCTGAG+TGG | + | chr5_2:2001788-2001807 | Msa0748740:CDS | 35.0% | |
| !! | CTTGTTTTCTTCTGTGAAGT+TGG | + | chr5_2:2001919-2001938 | Msa0748740:CDS | 35.0% |
| ! | TTGGTGTTTCAATCAGGGTA+TGG | + | chr5_2:2000021-2000040 | Msa0748740:CDS | 40.0% |
| TAATTGTGTGGGTAACTACC+CGG | - | chr5_2:2000057-2000076 | None:intergenic | 40.0% | |
| ! | CCTTTTTGTAAACCTCAAGG+GGG | + | chr5_2:2000159-2000178 | Msa0748740:CDS | 40.0% |
| ! | AAGGATAGTGCTGAGAATCT+AGG | + | chr5_2:2000186-2000205 | Msa0748740:CDS | 40.0% |
| AATCTAGGTGAGCTTCTCAT+GGG | + | chr5_2:2000201-2000220 | Msa0748740:CDS | 40.0% | |
| !!! | GAGTACTTTTTGAGATGGAC+TGG | + | chr5_2:2000408-2000427 | Msa0748740:CDS | 40.0% |
| CCCTGTTGGTATTAAGATTC+AGG | + | chr5_2:2000434-2000453 | Msa0748740:CDS | 40.0% | |
| TCTCAGATCCTTCCTTAACA+GGG | - | chr5_2:2000569-2000588 | None:intergenic | 40.0% | |
| TTCTCAGATCCTTCCTTAAC+AGG | - | chr5_2:2000570-2000589 | None:intergenic | 40.0% | |
| ! | TAAATGTGATCCATCGACTG+TGG | + | chr5_2:2000695-2000714 | Msa0748740:CDS | 40.0% |
| GTGGCAATGCCTATTAAAGA+AGG | + | chr5_2:2000714-2000733 | Msa0748740:CDS | 40.0% | |
| TTGAGGAGAGTGATATCAAG+TGG | + | chr5_2:2000769-2000788 | Msa0748740:CDS | 40.0% | |
| ATATCAAGTGGCCATCTAGA+TGG | + | chr5_2:2000781-2000800 | Msa0748740:CDS | 40.0% | |
| TATCAAGTGGCCATCTAGAT+GGG | + | chr5_2:2000782-2000801 | Msa0748740:CDS | 40.0% | |
| AAGTAAGCATCCCATCTAGA+TGG | - | chr5_2:2000795-2000814 | None:intergenic | 40.0% | |
| ATGGGATGCTTACTTGAAGA+TGG | + | chr5_2:2000800-2000819 | Msa0748740:CDS | 40.0% | |
| GATGCTTACTTGAAGATGGA+GGG | + | chr5_2:2000804-2000823 | Msa0748740:CDS | 40.0% | |
| AATTGAGGATCGAGAACCAA+TGG | - | chr5_2:2000839-2000858 | None:intergenic | 40.0% | |
| TGATCACCATCAACGAATTG+AGG | - | chr5_2:2000854-2000873 | None:intergenic | 40.0% | |
| TCTTCTTGAGAACTGTTAGG+AGG | + | chr5_2:2000901-2000920 | Msa0748740:CDS | 40.0% | |
| CTTCTTGAGAACTGTTAGGA+GGG | + | chr5_2:2000902-2000921 | Msa0748740:CDS | 40.0% | |
| CTTATCAAGCTCCTCATAAC+TGG | - | chr5_2:2000934-2000953 | None:intergenic | 40.0% | |
| CAGTTATGAGGAGCTTGATA+AGG | + | chr5_2:2000932-2000951 | Msa0748740:CDS | 40.0% | |
| CAGATGAATGAGGAGTTATC+TGG | + | chr5_2:2000966-2000985 | Msa0748740:CDS | 40.0% | |
| TGAATGAGGAGTTATCTGGT+TGG | + | chr5_2:2000970-2000989 | Msa0748740:CDS | 40.0% | |
| AAGAAGGATTTGATGGAGCA+CGG | - | chr5_2:2001019-2001038 | None:intergenic | 40.0% | |
| ! | GTGATGGAGTTCAGATTCTT+GGG | + | chr5_2:2001057-2001076 | Msa0748740:CDS | 40.0% |
| TACCTGTGATAAGTGTTCCA+CGG | - | chr5_2:2001136-2001155 | None:intergenic | 40.0% | |
| ATGATACTTGGTATTGCTGC+TGG | + | chr5_2:2001170-2001189 | Msa0748740:CDS | 40.0% | |
| GTTATGTTTCAGTTCGACTG+TGG | + | chr5_2:2001192-2001211 | Msa0748740:CDS | 40.0% | |
| CAAGATTGTGAGGATGAAGA+AGG | - | chr5_2:2001294-2001313 | None:intergenic | 40.0% | |
| ! | TACTTTGGCTTCCCCATAAT+AGG | - | chr5_2:2001322-2001341 | None:intergenic | 40.0% |
| !! | TGGTTCTAACAGGATACTCA+AGG | - | chr5_2:2001451-2001470 | None:intergenic | 40.0% |
| !! | GGAATTTGGTTGGTTCTAAC+AGG | - | chr5_2:2001461-2001480 | None:intergenic | 40.0% |
| CTCAATGAAAAGGGTTCCAA+AGG | - | chr5_2:2001546-2001565 | None:intergenic | 40.0% | |
| TATCATGTCCAGCATTTGGA+TGG | + | chr5_2:2001574-2001593 | Msa0748740:CDS | 40.0% | |
| ATCATGTCCAGCATTTGGAT+GGG | + | chr5_2:2001575-2001594 | Msa0748740:CDS | 40.0% | |
| ! | GGCCGTGTTTACTATGTTTT+CGG | + | chr5_2:2001596-2001615 | Msa0748740:CDS | 40.0% |
| ! | GCCGTGTTTACTATGTTTTC+GGG | + | chr5_2:2001597-2001616 | Msa0748740:CDS | 40.0% |
| TGGAAATCATTCTTTGCCTC+TGG | + | chr5_2:2001719-2001738 | Msa0748740:CDS | 40.0% | |
| AAGTACAGAGTTGCAGAAAC+AGG | - | chr5_2:2001815-2001834 | None:intergenic | 40.0% | |
| ! | TGTTTCTGCAACTCTGTACT+TGG | + | chr5_2:2001814-2001833 | Msa0748740:CDS | 40.0% |
| GTTTCTGCAACTCTGTACTT+GGG | + | chr5_2:2001815-2001834 | Msa0748740:CDS | 40.0% | |
| !! | CATGGTTCTAGCAATCATGT+TGG | + | chr5_2:2001850-2001869 | Msa0748740:CDS | 40.0% |
| ! | TTGGTGTTTCAATCAGGGTA+TGG | + | chr5_2:2000021-2000040 | Msa0748740:CDS | 40.0% |
| TAATTGTGTGGGTAACTACC+CGG | - | chr5_2:2000057-2000076 | None:intergenic | 40.0% | |
| ! | CCTTTTTGTAAACCTCAAGG+GGG | + | chr5_2:2000159-2000178 | Msa0748740:CDS | 40.0% |
| ! | AAGGATAGTGCTGAGAATCT+AGG | + | chr5_2:2000186-2000205 | Msa0748740:CDS | 40.0% |
| AATCTAGGTGAGCTTCTCAT+GGG | + | chr5_2:2000201-2000220 | Msa0748740:CDS | 40.0% | |
| !!! | GAGTACTTTTTGAGATGGAC+TGG | + | chr5_2:2000408-2000427 | Msa0748740:CDS | 40.0% |
| CCCTGTTGGTATTAAGATTC+AGG | + | chr5_2:2000434-2000453 | Msa0748740:CDS | 40.0% | |
| TCTCAGATCCTTCCTTAACA+GGG | - | chr5_2:2000569-2000588 | None:intergenic | 40.0% | |
| TTCTCAGATCCTTCCTTAAC+AGG | - | chr5_2:2000570-2000589 | None:intergenic | 40.0% | |
| ! | TAAATGTGATCCATCGACTG+TGG | + | chr5_2:2000695-2000714 | Msa0748740:CDS | 40.0% |
| GTGGCAATGCCTATTAAAGA+AGG | + | chr5_2:2000714-2000733 | Msa0748740:CDS | 40.0% | |
| TTGAGGAGAGTGATATCAAG+TGG | + | chr5_2:2000769-2000788 | Msa0748740:CDS | 40.0% | |
| ATATCAAGTGGCCATCTAGA+TGG | + | chr5_2:2000781-2000800 | Msa0748740:CDS | 40.0% | |
| TATCAAGTGGCCATCTAGAT+GGG | + | chr5_2:2000782-2000801 | Msa0748740:CDS | 40.0% | |
| AAGTAAGCATCCCATCTAGA+TGG | - | chr5_2:2000795-2000814 | None:intergenic | 40.0% | |
| ATGGGATGCTTACTTGAAGA+TGG | + | chr5_2:2000800-2000819 | Msa0748740:CDS | 40.0% | |
| GATGCTTACTTGAAGATGGA+GGG | + | chr5_2:2000804-2000823 | Msa0748740:CDS | 40.0% | |
| AATTGAGGATCGAGAACCAA+TGG | - | chr5_2:2000839-2000858 | None:intergenic | 40.0% | |
| TGATCACCATCAACGAATTG+AGG | - | chr5_2:2000854-2000873 | None:intergenic | 40.0% | |
| TCTTCTTGAGAACTGTTAGG+AGG | + | chr5_2:2000901-2000920 | Msa0748740:CDS | 40.0% | |
| CTTCTTGAGAACTGTTAGGA+GGG | + | chr5_2:2000902-2000921 | Msa0748740:CDS | 40.0% | |
| CTTATCAAGCTCCTCATAAC+TGG | - | chr5_2:2000934-2000953 | None:intergenic | 40.0% | |
| CAGTTATGAGGAGCTTGATA+AGG | + | chr5_2:2000932-2000951 | Msa0748740:CDS | 40.0% | |
| CAGATGAATGAGGAGTTATC+TGG | + | chr5_2:2000966-2000985 | Msa0748740:CDS | 40.0% | |
| TGAATGAGGAGTTATCTGGT+TGG | + | chr5_2:2000970-2000989 | Msa0748740:CDS | 40.0% | |
| AAGAAGGATTTGATGGAGCA+CGG | - | chr5_2:2001019-2001038 | None:intergenic | 40.0% | |
| ! | GTGATGGAGTTCAGATTCTT+GGG | + | chr5_2:2001057-2001076 | Msa0748740:CDS | 40.0% |
| TACCTGTGATAAGTGTTCCA+CGG | - | chr5_2:2001136-2001155 | None:intergenic | 40.0% | |
| ATGATACTTGGTATTGCTGC+TGG | + | chr5_2:2001170-2001189 | Msa0748740:CDS | 40.0% | |
| GTTATGTTTCAGTTCGACTG+TGG | + | chr5_2:2001192-2001211 | Msa0748740:CDS | 40.0% | |
| CAAGATTGTGAGGATGAAGA+AGG | - | chr5_2:2001294-2001313 | None:intergenic | 40.0% | |
| ! | TACTTTGGCTTCCCCATAAT+AGG | - | chr5_2:2001322-2001341 | None:intergenic | 40.0% |
| !! | TGGTTCTAACAGGATACTCA+AGG | - | chr5_2:2001451-2001470 | None:intergenic | 40.0% |
| !! | GGAATTTGGTTGGTTCTAAC+AGG | - | chr5_2:2001461-2001480 | None:intergenic | 40.0% |
| CTCAATGAAAAGGGTTCCAA+AGG | - | chr5_2:2001546-2001565 | None:intergenic | 40.0% | |
| TATCATGTCCAGCATTTGGA+TGG | + | chr5_2:2001574-2001593 | Msa0748740:CDS | 40.0% | |
| ATCATGTCCAGCATTTGGAT+GGG | + | chr5_2:2001575-2001594 | Msa0748740:CDS | 40.0% | |
| ! | GGCCGTGTTTACTATGTTTT+CGG | + | chr5_2:2001596-2001615 | Msa0748740:CDS | 40.0% |
| ! | GCCGTGTTTACTATGTTTTC+GGG | + | chr5_2:2001597-2001616 | Msa0748740:CDS | 40.0% |
| TGGAAATCATTCTTTGCCTC+TGG | + | chr5_2:2001719-2001738 | Msa0748740:CDS | 40.0% | |
| AAGTACAGAGTTGCAGAAAC+AGG | - | chr5_2:2001815-2001834 | None:intergenic | 40.0% | |
| ! | TGTTTCTGCAACTCTGTACT+TGG | + | chr5_2:2001814-2001833 | Msa0748740:CDS | 40.0% |
| GTTTCTGCAACTCTGTACTT+GGG | + | chr5_2:2001815-2001834 | Msa0748740:CDS | 40.0% | |
| !! | CATGGTTCTAGCAATCATGT+TGG | + | chr5_2:2001850-2001869 | Msa0748740:CDS | 40.0% |
| CTGGGTCATGGCTATTTGTT+TGG | + | chr5_2:2000002-2000021 | Msa0748740:CDS | 45.0% | |
| AGGGTATGGTTTCTACCTTC+CGG | + | chr5_2:2000035-2000054 | Msa0748740:CDS | 45.0% | |
| ! | TGGTGATGAATTGTCGGTGA+AGG | + | chr5_2:2000083-2000102 | Msa0748740:CDS | 45.0% |
| CCCCCTTGAGGTTTACAAAA+AGG | - | chr5_2:2000162-2000181 | None:intergenic | 45.0% | |
| !! | TAAACCTCAAGGGGGTGTTA+AGG | + | chr5_2:2000167-2000186 | Msa0748740:CDS | 45.0% |
| GAATCTAGGTGAGCTTCTCA+TGG | + | chr5_2:2000200-2000219 | Msa0748740:CDS | 45.0% | |
| ATCTAGGTGAGCTTCTCATG+GGG | + | chr5_2:2000202-2000221 | Msa0748740:CDS | 45.0% | |
| GGATCGAGAATTCGCCTTAT+AGG | + | chr5_2:2000229-2000248 | Msa0748740:CDS | 45.0% | |
| ACCAATGTGGCTCGTGTTAT+GGG | + | chr5_2:2000516-2000535 | Msa0748740:CDS | 45.0% | |
| TGAGATGATTCCCCCTGTTA+AGG | + | chr5_2:2000554-2000573 | Msa0748740:CDS | 45.0% | |
| ATGATTCCCCCTGTTAAGGA+AGG | + | chr5_2:2000558-2000577 | Msa0748740:CDS | 45.0% | |
| TCAGATCCTTCCTTAACAGG+GGG | - | chr5_2:2000567-2000586 | None:intergenic | 45.0% | |
| CTCAGATCCTTCCTTAACAG+GGG | - | chr5_2:2000568-2000587 | None:intergenic | 45.0% | |
| TAAGGAAGGATCTGAGAAGC+CGG | + | chr5_2:2000572-2000591 | Msa0748740:CDS | 45.0% | |
| GTACATGGTTGTTGGGTTTG+AGG | + | chr5_2:2000596-2000615 | Msa0748740:CDS | 45.0% | |
| TACCTACGAGGTAACGTTTG+AGG | + | chr5_2:2000752-2000771 | Msa0748740:CDS | 45.0% | |
| GGATGCTTACTTGAAGATGG+AGG | + | chr5_2:2000803-2000822 | Msa0748740:CDS | 45.0% | |
| ! | GATCGAGAACCAATGGACTT+TGG | - | chr5_2:2000832-2000851 | None:intergenic | 45.0% |
| CTCGATCCTCAATTCGTTGA+TGG | + | chr5_2:2000845-2000864 | Msa0748740:CDS | 45.0% | |
| ATGGTGATCACTTTCCTTGC+TGG | + | chr5_2:2000864-2000883 | Msa0748740:CDS | 45.0% | |
| AGCTCAAGCACAGATGAATG+AGG | + | chr5_2:2000956-2000975 | Msa0748740:CDS | 45.0% | |
| GTTATCTGGTTGGAAGCTTG+TGG | + | chr5_2:2000980-2000999 | Msa0748740:CDS | 45.0% | |
| !! | GGTGATGGAGTTCAGATTCT+TGG | + | chr5_2:2001056-2001075 | Msa0748740:CDS | 45.0% |
| TGGAGTTCAGATTCTTGGGA+TGG | + | chr5_2:2001061-2001080 | Msa0748740:CDS | 45.0% | |
| TGCACTTGGATTCATGTCAC+CGG | + | chr5_2:2001106-2001125 | Msa0748740:CDS | 45.0% | |
| ACCTGTGATAAGTGTTCCAC+GGG | - | chr5_2:2001135-2001154 | None:intergenic | 45.0% | |
| ! | AAAGCTGCTTGTTTCTTCCC+CGG | + | chr5_2:2001263-2001282 | Msa0748740:CDS | 45.0% |
| AGGATGAAGAAGGCAATACC+GGG | - | chr5_2:2001284-2001303 | None:intergenic | 45.0% | |
| GAGGATGAAGAAGGCAATAC+CGG | - | chr5_2:2001285-2001304 | None:intergenic | 45.0% | |
| TTATGGGGAAGCCAAAGTAC+AGG | + | chr5_2:2001323-2001342 | Msa0748740:CDS | 45.0% | |
| ATGGAATGGCTCCTGTACTT+TGG | - | chr5_2:2001337-2001356 | None:intergenic | 45.0% | |
| TCTGTCCCACTTACACTTGT+TGG | + | chr5_2:2001398-2001417 | Msa0748740:CDS | 45.0% | |
| AGCCACCAACAAGTGTAAGT+GGG | - | chr5_2:2001406-2001425 | None:intergenic | 45.0% | |
| TAGCCACCAACAAGTGTAAG+TGG | - | chr5_2:2001407-2001426 | None:intergenic | 45.0% | |
| !! | ACACTTGTTGGTGGCTACTT+TGG | + | chr5_2:2001410-2001429 | Msa0748740:CDS | 45.0% |
| CTAACAGGATACTCAAGGTG+AGG | - | chr5_2:2001446-2001465 | None:intergenic | 45.0% | |
| CTAGAGAAATTCCTCAGCAG+CGG | + | chr5_2:2001480-2001499 | Msa0748740:CDS | 45.0% | |
| CCTAGAACTAAAAGCCACGA+CGG | - | chr5_2:2001509-2001528 | None:intergenic | 45.0% | |
| !!! | TGGCTTTTAGTTCTAGGTGC+TGG | + | chr5_2:2001512-2001531 | Msa0748740:CDS | 45.0% |
| GAAAAGGGTTCCAAAGGGAA+GGG | - | chr5_2:2001540-2001559 | None:intergenic | 45.0% | |
| TGAAAAGGGTTCCAAAGGGA+AGG | - | chr5_2:2001541-2001560 | None:intergenic | 45.0% | |
| AACTTACATGCACCTCTGTG+TGG | + | chr5_2:2001679-2001698 | Msa0748740:CDS | 45.0% | |
| CTTGGGATACTCACTCTTCA+TGG | + | chr5_2:2001832-2001851 | Msa0748740:CDS | 45.0% | |
| !! | CTAGCAATCATGTTGGTGAC+AGG | + | chr5_2:2001857-2001876 | Msa0748740:CDS | 45.0% |
| TTGGGTTCCTCTCTTCATTC+TGG | + | chr5_2:2001885-2001904 | Msa0748740:CDS | 45.0% | |
| ACACGAACCAGAATGAAGAG+AGG | - | chr5_2:2001895-2001914 | None:intergenic | 45.0% | |
| CTGGGTCATGGCTATTTGTT+TGG | + | chr5_2:2000002-2000021 | Msa0748740:CDS | 45.0% | |
| AGGGTATGGTTTCTACCTTC+CGG | + | chr5_2:2000035-2000054 | Msa0748740:CDS | 45.0% | |
| ! | TGGTGATGAATTGTCGGTGA+AGG | + | chr5_2:2000083-2000102 | Msa0748740:CDS | 45.0% |
| CCCCCTTGAGGTTTACAAAA+AGG | - | chr5_2:2000162-2000181 | None:intergenic | 45.0% | |
| !! | TAAACCTCAAGGGGGTGTTA+AGG | + | chr5_2:2000167-2000186 | Msa0748740:CDS | 45.0% |
| GAATCTAGGTGAGCTTCTCA+TGG | + | chr5_2:2000200-2000219 | Msa0748740:CDS | 45.0% | |
| ATCTAGGTGAGCTTCTCATG+GGG | + | chr5_2:2000202-2000221 | Msa0748740:CDS | 45.0% | |
| GGATCGAGAATTCGCCTTAT+AGG | + | chr5_2:2000229-2000248 | Msa0748740:CDS | 45.0% | |
| ACCAATGTGGCTCGTGTTAT+GGG | + | chr5_2:2000516-2000535 | Msa0748740:CDS | 45.0% | |
| TGAGATGATTCCCCCTGTTA+AGG | + | chr5_2:2000554-2000573 | Msa0748740:CDS | 45.0% | |
| ATGATTCCCCCTGTTAAGGA+AGG | + | chr5_2:2000558-2000577 | Msa0748740:CDS | 45.0% | |
| TCAGATCCTTCCTTAACAGG+GGG | - | chr5_2:2000567-2000586 | None:intergenic | 45.0% | |
| CTCAGATCCTTCCTTAACAG+GGG | - | chr5_2:2000568-2000587 | None:intergenic | 45.0% | |
| TAAGGAAGGATCTGAGAAGC+CGG | + | chr5_2:2000572-2000591 | Msa0748740:CDS | 45.0% | |
| GTACATGGTTGTTGGGTTTG+AGG | + | chr5_2:2000596-2000615 | Msa0748740:CDS | 45.0% | |
| TACCTACGAGGTAACGTTTG+AGG | + | chr5_2:2000752-2000771 | Msa0748740:CDS | 45.0% | |
| GGATGCTTACTTGAAGATGG+AGG | + | chr5_2:2000803-2000822 | Msa0748740:CDS | 45.0% | |
| ! | GATCGAGAACCAATGGACTT+TGG | - | chr5_2:2000832-2000851 | None:intergenic | 45.0% |
| CTCGATCCTCAATTCGTTGA+TGG | + | chr5_2:2000845-2000864 | Msa0748740:CDS | 45.0% | |
| ATGGTGATCACTTTCCTTGC+TGG | + | chr5_2:2000864-2000883 | Msa0748740:CDS | 45.0% | |
| AGCTCAAGCACAGATGAATG+AGG | + | chr5_2:2000956-2000975 | Msa0748740:CDS | 45.0% | |
| GTTATCTGGTTGGAAGCTTG+TGG | + | chr5_2:2000980-2000999 | Msa0748740:CDS | 45.0% | |
| !! | GGTGATGGAGTTCAGATTCT+TGG | + | chr5_2:2001056-2001075 | Msa0748740:CDS | 45.0% |
| TGGAGTTCAGATTCTTGGGA+TGG | + | chr5_2:2001061-2001080 | Msa0748740:CDS | 45.0% | |
| TGCACTTGGATTCATGTCAC+CGG | + | chr5_2:2001106-2001125 | Msa0748740:CDS | 45.0% | |
| ACCTGTGATAAGTGTTCCAC+GGG | - | chr5_2:2001135-2001154 | None:intergenic | 45.0% | |
| ! | AAAGCTGCTTGTTTCTTCCC+CGG | + | chr5_2:2001263-2001282 | Msa0748740:CDS | 45.0% |
| AGGATGAAGAAGGCAATACC+GGG | - | chr5_2:2001284-2001303 | None:intergenic | 45.0% | |
| GAGGATGAAGAAGGCAATAC+CGG | - | chr5_2:2001285-2001304 | None:intergenic | 45.0% | |
| TTATGGGGAAGCCAAAGTAC+AGG | + | chr5_2:2001323-2001342 | Msa0748740:CDS | 45.0% | |
| ATGGAATGGCTCCTGTACTT+TGG | - | chr5_2:2001337-2001356 | None:intergenic | 45.0% | |
| TCTGTCCCACTTACACTTGT+TGG | + | chr5_2:2001398-2001417 | Msa0748740:CDS | 45.0% | |
| AGCCACCAACAAGTGTAAGT+GGG | - | chr5_2:2001406-2001425 | None:intergenic | 45.0% | |
| TAGCCACCAACAAGTGTAAG+TGG | - | chr5_2:2001407-2001426 | None:intergenic | 45.0% | |
| !! | ACACTTGTTGGTGGCTACTT+TGG | + | chr5_2:2001410-2001429 | Msa0748740:CDS | 45.0% |
| CTAACAGGATACTCAAGGTG+AGG | - | chr5_2:2001446-2001465 | None:intergenic | 45.0% | |
| CTAGAGAAATTCCTCAGCAG+CGG | + | chr5_2:2001480-2001499 | Msa0748740:CDS | 45.0% | |
| CCTAGAACTAAAAGCCACGA+CGG | - | chr5_2:2001509-2001528 | None:intergenic | 45.0% | |
| !!! | TGGCTTTTAGTTCTAGGTGC+TGG | + | chr5_2:2001512-2001531 | Msa0748740:CDS | 45.0% |
| GAAAAGGGTTCCAAAGGGAA+GGG | - | chr5_2:2001540-2001559 | None:intergenic | 45.0% | |
| TGAAAAGGGTTCCAAAGGGA+AGG | - | chr5_2:2001541-2001560 | None:intergenic | 45.0% | |
| AACTTACATGCACCTCTGTG+TGG | + | chr5_2:2001679-2001698 | Msa0748740:CDS | 45.0% | |
| CTTGGGATACTCACTCTTCA+TGG | + | chr5_2:2001832-2001851 | Msa0748740:CDS | 45.0% | |
| !! | CTAGCAATCATGTTGGTGAC+AGG | + | chr5_2:2001857-2001876 | Msa0748740:CDS | 45.0% |
| TTGGGTTCCTCTCTTCATTC+TGG | + | chr5_2:2001885-2001904 | Msa0748740:CDS | 45.0% | |
| ACACGAACCAGAATGAAGAG+AGG | - | chr5_2:2001895-2001914 | None:intergenic | 45.0% | |
| GGGTATGGTTTCTACCTTCC+GGG | + | chr5_2:2000036-2000055 | Msa0748740:CDS | 50.0% | |
| CTATCCTTAACACCCCCTTG+AGG | - | chr5_2:2000174-2000193 | None:intergenic | 50.0% | |
| TCTAGGTGAGCTTCTCATGG+GGG | + | chr5_2:2000203-2000222 | Msa0748740:CDS | 50.0% | |
| GACCAATGTGGCTCGTGTTA+TGG | + | chr5_2:2000515-2000534 | Msa0748740:CDS | 50.0% | |
| TCCCATAACACGAGCCACAT+TGG | - | chr5_2:2000520-2000539 | None:intergenic | 50.0% | |
| TGTTATGGGAACCGGTGATG+CGG | + | chr5_2:2000530-2000549 | Msa0748740:CDS | 50.0% | |
| AATCATCTCAGCCGCATCAC+CGG | - | chr5_2:2000544-2000563 | None:intergenic | 50.0% | |
| AAGGAAGGATCTGAGAAGCC+GGG | + | chr5_2:2000573-2000592 | Msa0748740:CDS | 50.0% | |
| AACCCAACAACCATGTACCC+CGG | - | chr5_2:2000594-2000613 | None:intergenic | 50.0% | |
| ! | ATAGGCATTGCCACAGTCGA+TGG | - | chr5_2:2000708-2000727 | None:intergenic | 50.0% |
| !! | AGCGGCTGGCCTTCTTTAAT+AGG | - | chr5_2:2000726-2000745 | None:intergenic | 50.0% |
| ACCTCGTAGGTAAACGCAAG+CGG | - | chr5_2:2000744-2000763 | None:intergenic | 50.0% | |
| CTCCTCAAACGTTACCTCGT+AGG | - | chr5_2:2000757-2000776 | None:intergenic | 50.0% | |
| GAGAACTGTTAGGAGGGATC+TGG | + | chr5_2:2000908-2000927 | Msa0748740:CDS | 50.0% | |
| ATCTGGTTGGAAGCTTGTGG+TGG | + | chr5_2:2000983-2001002 | Msa0748740:CDS | 50.0% | |
| TCTGGTTGGAAGCTTGTGGT+GGG | + | chr5_2:2000984-2001003 | Msa0748740:CDS | 50.0% | |
| TGTGATAAGTGTTCCACGGG+AGG | - | chr5_2:2001132-2001151 | None:intergenic | 50.0% | |
| TCCCGTGGAACACTTATCAC+AGG | + | chr5_2:2001131-2001150 | Msa0748740:CDS | 50.0% | |
| AGGGTTGGGTTTCAGTTGCA+TGG | + | chr5_2:2001240-2001259 | Msa0748740:CDS | 50.0% | |
| GGATGAAGAAGGCAATACCG+GGG | - | chr5_2:2001283-2001302 | None:intergenic | 50.0% | |
| ! | GTCCCACTTACACTTGTTGG+TGG | + | chr5_2:2001401-2001420 | Msa0748740:CDS | 50.0% |
| !! | TGGTGGCTACTTTGGAGCAA+AGG | + | chr5_2:2001418-2001437 | Msa0748740:CDS | 50.0% |
| CGCTGCTGAGGAATTTCTCT+AGG | - | chr5_2:2001482-2001501 | None:intergenic | 50.0% | |
| !!! | CCGTCGTGGCTTTTAGTTCT+AGG | + | chr5_2:2001506-2001525 | Msa0748740:CDS | 50.0% |
| ! | TCTTGTGGTGGTTTGTGCTG+AGG | + | chr5_2:2001643-2001662 | Msa0748740:CDS | 50.0% |
| TTACATGCACCTCTGTGTGG+AGG | + | chr5_2:2001682-2001701 | Msa0748740:CDS | 50.0% | |
| ATCTCCAATCCTCCACACAG+AGG | - | chr5_2:2001694-2001713 | None:intergenic | 50.0% | |
| TCTGTGTGGAGGATTGGAGA+TGG | + | chr5_2:2001693-2001712 | Msa0748740:CDS | 50.0% | |
| GTACAGTGCAACAGAACCAG+AGG | - | chr5_2:2001738-2001757 | None:intergenic | 50.0% | |
| !! | ATGTTGGTGACAGGCACAGT+TGG | + | chr5_2:2001866-2001885 | Msa0748740:CDS | 50.0% |
| !! | TGTTGGTGACAGGCACAGTT+GGG | + | chr5_2:2001867-2001886 | Msa0748740:CDS | 50.0% |
| GGGTATGGTTTCTACCTTCC+GGG | + | chr5_2:2000036-2000055 | Msa0748740:CDS | 50.0% | |
| CTATCCTTAACACCCCCTTG+AGG | - | chr5_2:2000174-2000193 | None:intergenic | 50.0% | |
| TCTAGGTGAGCTTCTCATGG+GGG | + | chr5_2:2000203-2000222 | Msa0748740:CDS | 50.0% | |
| GACCAATGTGGCTCGTGTTA+TGG | + | chr5_2:2000515-2000534 | Msa0748740:CDS | 50.0% | |
| TCCCATAACACGAGCCACAT+TGG | - | chr5_2:2000520-2000539 | None:intergenic | 50.0% | |
| TGTTATGGGAACCGGTGATG+CGG | + | chr5_2:2000530-2000549 | Msa0748740:CDS | 50.0% | |
| AATCATCTCAGCCGCATCAC+CGG | - | chr5_2:2000544-2000563 | None:intergenic | 50.0% | |
| AAGGAAGGATCTGAGAAGCC+GGG | + | chr5_2:2000573-2000592 | Msa0748740:CDS | 50.0% | |
| AACCCAACAACCATGTACCC+CGG | - | chr5_2:2000594-2000613 | None:intergenic | 50.0% | |
| ! | ATAGGCATTGCCACAGTCGA+TGG | - | chr5_2:2000708-2000727 | None:intergenic | 50.0% |
| !! | AGCGGCTGGCCTTCTTTAAT+AGG | - | chr5_2:2000726-2000745 | None:intergenic | 50.0% |
| ACCTCGTAGGTAAACGCAAG+CGG | - | chr5_2:2000744-2000763 | None:intergenic | 50.0% | |
| CTCCTCAAACGTTACCTCGT+AGG | - | chr5_2:2000757-2000776 | None:intergenic | 50.0% | |
| GAGAACTGTTAGGAGGGATC+TGG | + | chr5_2:2000908-2000927 | Msa0748740:CDS | 50.0% | |
| ATCTGGTTGGAAGCTTGTGG+TGG | + | chr5_2:2000983-2001002 | Msa0748740:CDS | 50.0% | |
| TCTGGTTGGAAGCTTGTGGT+GGG | + | chr5_2:2000984-2001003 | Msa0748740:CDS | 50.0% | |
| TGTGATAAGTGTTCCACGGG+AGG | - | chr5_2:2001132-2001151 | None:intergenic | 50.0% | |
| TCCCGTGGAACACTTATCAC+AGG | + | chr5_2:2001131-2001150 | Msa0748740:CDS | 50.0% | |
| AGGGTTGGGTTTCAGTTGCA+TGG | + | chr5_2:2001240-2001259 | Msa0748740:CDS | 50.0% | |
| GGATGAAGAAGGCAATACCG+GGG | - | chr5_2:2001283-2001302 | None:intergenic | 50.0% | |
| ! | GTCCCACTTACACTTGTTGG+TGG | + | chr5_2:2001401-2001420 | Msa0748740:CDS | 50.0% |
| !! | TGGTGGCTACTTTGGAGCAA+AGG | + | chr5_2:2001418-2001437 | Msa0748740:CDS | 50.0% |
| CGCTGCTGAGGAATTTCTCT+AGG | - | chr5_2:2001482-2001501 | None:intergenic | 50.0% | |
| !!! | CCGTCGTGGCTTTTAGTTCT+AGG | + | chr5_2:2001506-2001525 | Msa0748740:CDS | 50.0% |
| ! | TCTTGTGGTGGTTTGTGCTG+AGG | + | chr5_2:2001643-2001662 | Msa0748740:CDS | 50.0% |
| TTACATGCACCTCTGTGTGG+AGG | + | chr5_2:2001682-2001701 | Msa0748740:CDS | 50.0% | |
| ATCTCCAATCCTCCACACAG+AGG | - | chr5_2:2001694-2001713 | None:intergenic | 50.0% | |
| TCTGTGTGGAGGATTGGAGA+TGG | + | chr5_2:2001693-2001712 | Msa0748740:CDS | 50.0% | |
| GTACAGTGCAACAGAACCAG+AGG | - | chr5_2:2001738-2001757 | None:intergenic | 50.0% | |
| !! | ATGTTGGTGACAGGCACAGT+TGG | + | chr5_2:2001866-2001885 | Msa0748740:CDS | 50.0% |
| !! | TGTTGGTGACAGGCACAGTT+GGG | + | chr5_2:2001867-2001886 | Msa0748740:CDS | 50.0% |
| TGTGTGGGTAACTACCCGGA+AGG | - | chr5_2:2000053-2000072 | None:intergenic | 55.0% | |
| GTGAGCTTCTCATGGGGGAT+CGG | + | chr5_2:2000208-2000227 | Msa0748740:CDS | 55.0% | |
| !! | AGATGGACTGGGTACCCTGT+TGG | + | chr5_2:2000420-2000439 | Msa0748740:CDS | 55.0% |
| GTGGCTCGTGTTATGGGAAC+CGG | + | chr5_2:2000522-2000541 | Msa0748740:CDS | 55.0% | |
| AGGAAGGATCTGAGAAGCCG+GGG | + | chr5_2:2000574-2000593 | Msa0748740:CDS | 55.0% | |
| ATCTGAGAAGCCGGGGTACA+TGG | + | chr5_2:2000581-2000600 | Msa0748740:CDS | 55.0% | |
| AAGCCGGGGTACATGGTTGT+TGG | + | chr5_2:2000588-2000607 | Msa0748740:CDS | 55.0% | |
| AGCCGGGGTACATGGTTGTT+GGG | + | chr5_2:2000589-2000608 | Msa0748740:CDS | 55.0% | |
| TGGAGGGAGCCAAAGTCCAT+TGG | + | chr5_2:2000820-2000839 | Msa0748740:CDS | 55.0% | |
| GAGGGATCTGGCCAGTTATG+AGG | + | chr5_2:2000920-2000939 | Msa0748740:CDS | 55.0% | |
| CTGGTTGGAAGCTTGTGGTG+GGG | + | chr5_2:2000985-2001004 | Msa0748740:CDS | 55.0% | |
| TGGTTGGAAGCTTGTGGTGG+GGG | + | chr5_2:2000986-2001005 | Msa0748740:CDS | 55.0% | |
| ATAAGTGTTCCACGGGAGGC+CGG | - | chr5_2:2001128-2001147 | None:intergenic | 55.0% | |
| AACACGGCCCATCCAAATGC+TGG | - | chr5_2:2001585-2001604 | None:intergenic | 55.0% | |
| TGCACCTCTGTGTGGAGGAT+TGG | + | chr5_2:2001687-2001706 | Msa0748740:CDS | 55.0% | |
| GTGTGGAGGATTGGAGATGG+TGG | + | chr5_2:2001696-2001715 | Msa0748740:CDS | 55.0% | |
| ! | TGGAGGATTGGAGATGGTGG+TGG | + | chr5_2:2001699-2001718 | Msa0748740:CDS | 55.0% |
| TGTGTGGGTAACTACCCGGA+AGG | - | chr5_2:2000053-2000072 | None:intergenic | 55.0% | |
| GTGAGCTTCTCATGGGGGAT+CGG | + | chr5_2:2000208-2000227 | Msa0748740:CDS | 55.0% | |
| !! | AGATGGACTGGGTACCCTGT+TGG | + | chr5_2:2000420-2000439 | Msa0748740:CDS | 55.0% |
| GTGGCTCGTGTTATGGGAAC+CGG | + | chr5_2:2000522-2000541 | Msa0748740:CDS | 55.0% | |
| AGGAAGGATCTGAGAAGCCG+GGG | + | chr5_2:2000574-2000593 | Msa0748740:CDS | 55.0% | |
| ATCTGAGAAGCCGGGGTACA+TGG | + | chr5_2:2000581-2000600 | Msa0748740:CDS | 55.0% | |
| AAGCCGGGGTACATGGTTGT+TGG | + | chr5_2:2000588-2000607 | Msa0748740:CDS | 55.0% | |
| AGCCGGGGTACATGGTTGTT+GGG | + | chr5_2:2000589-2000608 | Msa0748740:CDS | 55.0% | |
| TGGAGGGAGCCAAAGTCCAT+TGG | + | chr5_2:2000820-2000839 | Msa0748740:CDS | 55.0% | |
| GAGGGATCTGGCCAGTTATG+AGG | + | chr5_2:2000920-2000939 | Msa0748740:CDS | 55.0% | |
| CTGGTTGGAAGCTTGTGGTG+GGG | + | chr5_2:2000985-2001004 | Msa0748740:CDS | 55.0% | |
| TGGTTGGAAGCTTGTGGTGG+GGG | + | chr5_2:2000986-2001005 | Msa0748740:CDS | 55.0% | |
| ATAAGTGTTCCACGGGAGGC+CGG | - | chr5_2:2001128-2001147 | None:intergenic | 55.0% | |
| AACACGGCCCATCCAAATGC+TGG | - | chr5_2:2001585-2001604 | None:intergenic | 55.0% | |
| TGCACCTCTGTGTGGAGGAT+TGG | + | chr5_2:2001687-2001706 | Msa0748740:CDS | 55.0% | |
| GTGTGGAGGATTGGAGATGG+TGG | + | chr5_2:2001696-2001715 | Msa0748740:CDS | 55.0% | |
| ! | TGGAGGATTGGAGATGGTGG+TGG | + | chr5_2:2001699-2001718 | Msa0748740:CDS | 55.0% |
| CGTAGGTAAACGCAAGCGGC+TGG | - | chr5_2:2000740-2000759 | None:intergenic | 60.0% | |
| GCCGCTTGCGTTTACCTACG+AGG | + | chr5_2:2000740-2000759 | Msa0748740:CDS | 60.0% | |
| CTGTGGAGAACACTCGCGTG+CGG | + | chr5_2:2001209-2001228 | Msa0748740:CDS | 60.0% | |
| GTGCGGCGATCAGAAGGGTT+GGG | + | chr5_2:2001226-2001245 | Msa0748740:CDS | 60.0% | |
| CGTAGGTAAACGCAAGCGGC+TGG | - | chr5_2:2000740-2000759 | None:intergenic | 60.0% | |
| GCCGCTTGCGTTTACCTACG+AGG | + | chr5_2:2000740-2000759 | Msa0748740:CDS | 60.0% | |
| CTGTGGAGAACACTCGCGTG+CGG | + | chr5_2:2001209-2001228 | Msa0748740:CDS | 60.0% | |
| GTGCGGCGATCAGAAGGGTT+GGG | + | chr5_2:2001226-2001245 | Msa0748740:CDS | 60.0% | |
| TTCATGTCACCGGCCTCCCG+TGG | + | chr5_2:2001116-2001135 | Msa0748740:CDS | 65.0% | |
| ACTCGCGTGCGGCGATCAGA+AGG | + | chr5_2:2001220-2001239 | Msa0748740:CDS | 65.0% | |
| CTCGCGTGCGGCGATCAGAA+GGG | + | chr5_2:2001221-2001240 | Msa0748740:CDS | 65.0% | |
| CGTGCGGCGATCAGAAGGGT+TGG | + | chr5_2:2001225-2001244 | Msa0748740:CDS | 65.0% | |
| CACGACGGATACCGCTGCTG+AGG | - | chr5_2:2001494-2001513 | None:intergenic | 65.0% | |
| CTCAGCAGCGGTATCCGTCG+TGG | + | chr5_2:2001492-2001511 | Msa0748740:CDS | 65.0% | |
| !! | GGTGCTGGCACCCTTCCCTT+TGG | + | chr5_2:2001527-2001546 | Msa0748740:CDS | 65.0% |
| TTCATGTCACCGGCCTCCCG+TGG | + | chr5_2:2001116-2001135 | Msa0748740:CDS | 65.0% | |
| ACTCGCGTGCGGCGATCAGA+AGG | + | chr5_2:2001220-2001239 | Msa0748740:CDS | 65.0% | |
| CTCGCGTGCGGCGATCAGAA+GGG | + | chr5_2:2001221-2001240 | Msa0748740:CDS | 65.0% | |
| CGTGCGGCGATCAGAAGGGT+TGG | + | chr5_2:2001225-2001244 | Msa0748740:CDS | 65.0% | |
| CACGACGGATACCGCTGCTG+AGG | - | chr5_2:2001494-2001513 | None:intergenic | 65.0% | |
| CTCAGCAGCGGTATCCGTCG+TGG | + | chr5_2:2001492-2001511 | Msa0748740:CDS | 65.0% | |
| !! | GGTGCTGGCACCCTTCCCTT+TGG | + | chr5_2:2001527-2001546 | Msa0748740:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 1999976 | 2001946 | 1999976 | ID=Msa0748740;Name=Msa0748740 |
| chr5_2 | mRNA | 1999976 | 2001946 | 1999976 | ID=Msa0748740-mRNA-1;Parent=Msa0748740;Name=Msa0748740-mRNA-1;_AED=0.28;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|656 |
| chr5_2 | exon | 1999976 | 2001946 | 1999976 | ID=Msa0748740-mRNA-1:exon:594;Parent=Msa0748740-mRNA-1 |
| chr5_2 | CDS | 1999976 | 2001946 | 1999976 | ID=Msa0748740-mRNA-1:cds;Parent=Msa0748740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
