Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425310 | XP_003602305.1 | 99.346 | 459 | 3 | 0 | 1 | 459 | 1 | 459 | 0.0 | 930 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425310 | sp|Q6N075|MFSD5_HUMAN | 35.294 | 459 | 270 | 11 | 6 | 456 | 6 | 445 | 5.42e-73 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425310 | G7J858 | 99.346 | 459 | 3 | 0 | 1 | 459 | 1 | 459 | 0.0 | 930 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0383660 | Msa0425310 | 0.807606 | 4.657117e-50 | -8.615850e-47 |
| Msa0425310 | Msa0427760 | 0.801204 | 1.005209e-48 | -8.615850e-47 |
| Msa0425310 | Msa0427950 | 0.800412 | 1.458739e-48 | -8.615850e-47 |
| Msa0425310 | Msa0521890 | 0.825013 | 5.909238e-54 | -8.615850e-47 |
| Msa0425310 | Msa0558720 | 0.840854 | 6.767367e-58 | -8.615850e-47 |
| Msa0425310 | Msa0748740 | 0.813019 | 3.163761e-51 | -8.615850e-47 |
| Msa0425310 | Msa0799450 | 0.803841 | 2.874825e-49 | -8.615850e-47 |
| Msa0425310 | Msa1215930 | 0.812894 | 3.369872e-51 | -8.615850e-47 |
| Msa0425310 | Msa1257720 | 0.801050 | 1.080959e-48 | -8.615850e-47 |
| Msa0425310 | Msa1257780 | 0.850078 | 2.141943e-60 | -8.615850e-47 |
| Msa0425310 | Msa1404680 | 0.887557 | 1.285686e-72 | -8.615850e-47 |
| Msa0425310 | Msa1455400 | 0.904425 | 1.244714e-79 | -8.615850e-47 |
| Msa0287640 | Msa0425310 | 0.801574 | 8.443933e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425310 | MtrunA17_Chr3g0127341 | 99.346 | 459 | 3 | 0 | 1 | 459 | 1 | 459 | 0.0 | 930 |
| Msa0425310 | MtrunA17_Chr5g0401471 | 27.078 | 373 | 240 | 7 | 32 | 397 | 47 | 394 | 1.59e-32 | 128 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425310 | AT4G27720.1 | 85.000 | 460 | 68 | 1 | 1 | 459 | 1 | 460 | 0.0 | 818 |
| Msa0425310 | AT3G49310.1 | 81.739 | 460 | 83 | 1 | 1 | 459 | 1 | 460 | 0.0 | 793 |
| Msa0425310 | AT1G64650.1 | 81.345 | 461 | 83 | 2 | 1 | 458 | 1 | 461 | 0.0 | 790 |
| Msa0425310 | AT1G64650.2 | 81.068 | 412 | 75 | 2 | 50 | 458 | 9 | 420 | 0.0 | 704 |
| Msa0425310 | AT2G23093.1 | 25.517 | 435 | 273 | 13 | 30 | 446 | 46 | 447 | 4.06e-21 | 95.9 |
| Msa0425310 | AT2G23093.2 | 25.250 | 400 | 248 | 13 | 65 | 446 | 14 | 380 | 3.74e-19 | 89.4 |
Find 138 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCGCAGCACCCCTAAAT+TGG | 0.113644 | 3_2:+75701225 | None:intergenic |
| CGCCGGGTGCATTCAGCTTT+TGG | 0.118395 | 3_2:-75700507 | Msa0425310:CDS |
| CTTACTTATGTCAATTCTTT+TGG | 0.125118 | 3_2:-75699088 | Msa0425310:three_prime_UTR |
| CAACTCTTCATTGCTGGATT+TGG | 0.156725 | 3_2:-75702814 | Msa0425310:CDS |
| TACAAAATTAAGACAATTAA+AGG | 0.164320 | 3_2:+75699022 | None:intergenic |
| ACAGAGAAATGTTGTAAAAT+TGG | 0.205061 | 3_2:+75703808 | None:intergenic |
| TTCTCGAAGGCTATATTTCT+TGG | 0.216269 | 3_2:-75701428 | Msa0425310:CDS |
| CCCAAAACTTAATCAATTAC+AGG | 0.219139 | 3_2:+75699348 | None:intergenic |
| TTTGGGTCTTCGATGTTATT+TGG | 0.221679 | 3_2:-75702796 | Msa0425310:CDS |
| AGAGCTTGCTTGCCCAATTT+AGG | 0.224575 | 3_2:-75701238 | Msa0425310:CDS |
| ACCTGTAATTGATTAAGTTT+TGG | 0.229731 | 3_2:-75699349 | Msa0425310:exon |
| TTGAGGAGAAATCTCCATTT+TGG | 0.255910 | 3_2:-75699119 | Msa0425310:three_prime_UTR |
| AACTCTTCATTGCTGGATTT+GGG | 0.263781 | 3_2:-75702813 | Msa0425310:CDS |
| CTTGATGTTGGGCCGTATCT+TGG | 0.280247 | 3_2:-75702572 | Msa0425310:CDS |
| AAAGTTGTGTTGGCATATTC+TGG | 0.280683 | 3_2:-75700469 | Msa0425310:CDS |
| TCCAAACAGCCCAGAAAATA+TGG | 0.295391 | 3_2:+75701391 | None:intergenic |
| GAGCTTGCTTGCCCAATTTA+GGG | 0.300525 | 3_2:-75701237 | Msa0425310:CDS |
| TTCCCTATCACTGTTATGTT+TGG | 0.303539 | 3_2:-75699996 | Msa0425310:CDS |
| GCTGCGGTGGCCATTGCTTC+TGG | 0.308302 | 3_2:-75701212 | Msa0425310:intron |
| AGTAAGAACTACTACCAAAA+TGG | 0.322831 | 3_2:+75699105 | None:intergenic |
| GTGAAGGAGTTCAAGCTAAA+AGG | 0.325343 | 3_2:-75699221 | Msa0425310:three_prime_UTR |
| CTATACAGTACGTATGGATA+TGG | 0.330750 | 3_2:-75702853 | Msa0425310:CDS |
| CCACCACCTGTTGCTTTAGT+AGG | 0.348043 | 3_2:+75700539 | None:intergenic |
| TCTCTGTTAACTCGCGATAA+TGG | 0.351173 | 3_2:-75703792 | Msa0425310:exon |
| ATGCCAAACATAACAGTGAT+AGG | 0.360971 | 3_2:+75699993 | None:intergenic |
| CTTGTTGATACATTGGCTCT+TGG | 0.361460 | 3_2:-75701362 | Msa0425310:CDS |
| ATCGGACAACTCTTCATTGC+TGG | 0.362820 | 3_2:-75702820 | Msa0425310:CDS |
| AACTCCTTCACTTGGTTGGT+GGG | 0.364271 | 3_2:+75699233 | None:intergenic |
| AAGGCTATATTTCTTGGAAA+TGG | 0.366820 | 3_2:-75701422 | Msa0425310:CDS |
| CTCGCTTGCATCTAAGTTGA+TGG | 0.381655 | 3_2:-75700759 | Msa0425310:CDS |
| TTGAGATCTCATCTTCATAA+TGG | 0.384178 | 3_2:+75700442 | None:intergenic |
| TTCTCCTCAAGTAAAATAAT+AGG | 0.387414 | 3_2:+75699132 | None:intergenic |
| ACTCACTCTGCAAGAGAGAC+TGG | 0.389907 | 3_2:-75703839 | Msa0425310:five_prime_UTR |
| ATGTTATTTGGAACAATTGT+GGG | 0.395704 | 3_2:-75702784 | Msa0425310:CDS |
| GGATCTAAGTTTGTCTCGTT+GGG | 0.396886 | 3_2:-75699059 | Msa0425310:three_prime_UTR |
| CTCATTTATTCTCTCATGAT+GGG | 0.397970 | 3_2:-75703644 | Msa0425310:intron |
| TCTCATTTATTCTCTCATGA+TGG | 0.399753 | 3_2:-75703645 | Msa0425310:CDS |
| AAAGTTCATGATGGTGCTCC+TGG | 0.400456 | 3_2:+75700403 | None:intergenic |
| AAGTCACACAAGCTCTCTTC+CGG | 0.400505 | 3_2:+75702650 | None:intergenic |
| CACCGCAGCACCCCTAAATT+GGG | 0.400707 | 3_2:+75701226 | None:intergenic |
| GAGAGAGAGAAGGGTGAAGA+AGG | 0.406264 | 3_2:+75703920 | None:intergenic |
| GCCATACAGTCTCTCTTTGA+AGG | 0.407686 | 3_2:-75700893 | Msa0425310:CDS |
| ATTCATGTTATCTTCAATGT+TGG | 0.410052 | 3_2:-75700786 | Msa0425310:CDS |
| TGTATACCTTTGTGTTCCTA+TGG | 0.414069 | 3_2:-75700865 | Msa0425310:CDS |
| TTGTTCTTCTACCTTGTCTT+CGG | 0.421408 | 3_2:-75703767 | Msa0425310:CDS |
| TTCATGTTATCTTCAATGTT+GGG | 0.421818 | 3_2:-75700785 | Msa0425310:CDS |
| GAACTCCTTCACTTGGTTGG+TGG | 0.422041 | 3_2:+75699232 | None:intergenic |
| GACAGAAACTGCATTATGTA+AGG | 0.422323 | 3_2:+75699300 | None:intergenic |
| GCAGTTCCTACTAAAGCAAC+AGG | 0.424570 | 3_2:-75700545 | Msa0425310:CDS |
| TTAATCAATTACAGGTTCAA+TGG | 0.426072 | 3_2:+75699356 | None:intergenic |
| CATATCCATACGTACTGTAT+AGG | 0.434125 | 3_2:+75702854 | None:intergenic |
| TGAAAACAGAAACAGAAGAT+TGG | 0.434785 | 3_2:-75699409 | Msa0425310:intron |
| CTTGAACTCCTTCACTTGGT+TGG | 0.437650 | 3_2:+75699229 | None:intergenic |
| GAGAAGATAATTGTTCTTGA+AGG | 0.443920 | 3_2:+75703664 | None:intergenic |
| TCTACATGGACAGAAAACTA+TGG | 0.449195 | 3_2:-75701278 | Msa0425310:CDS |
| AAACCTGCAGCAGCGTCAAA+GGG | 0.457365 | 3_2:+75701329 | None:intergenic |
| GGGATCTAAGTTTGTCTCGT+TGG | 0.458723 | 3_2:-75699060 | Msa0425310:three_prime_UTR |
| ATGGTGCTCCTGGCTTCCTC+AGG | 0.461583 | 3_2:+75700413 | None:intergenic |
| TCATCATTTGGGCTCAATGC+AGG | 0.462714 | 3_2:+75700839 | None:intergenic |
| AGTACGTATGGATATGGAAA+AGG | 0.464152 | 3_2:-75702847 | Msa0425310:CDS |
| GTATGGCTATAGCTGGTGAT+TGG | 0.466459 | 3_2:-75702900 | Msa0425310:intron |
| CTGTATAGGTAGTAAACATA+TGG | 0.466801 | 3_2:+75702868 | None:intergenic |
| TTTGAGTGTGAAGGTAAATC+TGG | 0.466842 | 3_2:-75699258 | Msa0425310:three_prime_UTR |
| GTACGTATGGATATGGAAAA+GGG | 0.469222 | 3_2:-75702846 | Msa0425310:CDS |
| GAAATGTTGTAAAATTGGAT+TGG | 0.471122 | 3_2:+75703813 | None:intergenic |
| ACAAAATTAAGACAATTAAA+GGG | 0.472104 | 3_2:+75699023 | None:intergenic |
| GGTGATGCAGCTTGCAATGT+AGG | 0.472241 | 3_2:+75702618 | None:intergenic |
| TTGATGTTGGGCCGTATCTT+GGG | 0.472991 | 3_2:-75702571 | Msa0425310:CDS |
| TTCTTCTACCTTGTCTTCGG+TGG | 0.475762 | 3_2:-75703764 | Msa0425310:CDS |
| GCTAGTTGCTGAGCATTTCA+AGG | 0.477810 | 3_2:-75702506 | Msa0425310:intron |
| AAAACCTGCAGCAGCGTCAA+AGG | 0.480550 | 3_2:+75701328 | None:intergenic |
| CAATACAGAGTCTTGATGTT+GGG | 0.480967 | 3_2:-75702583 | Msa0425310:CDS |
| ATAGATGAAGAGAGAGAGAA+GGG | 0.482836 | 3_2:+75703911 | None:intergenic |
| GTTCAAGCTAAAAGGATATG+TGG | 0.483906 | 3_2:-75699213 | Msa0425310:three_prime_UTR |
| GGTGGTGGTCTCTCATTCGC+CGG | 0.485040 | 3_2:-75700524 | Msa0425310:CDS |
| GGGTGAAGAAGGTTATATAG+TGG | 0.489029 | 3_2:+75703931 | None:intergenic |
| CCAATTTAGGGGTGCTGCGG+TGG | 0.489380 | 3_2:-75701225 | Msa0425310:CDS |
| ATAGCATACAGTGGTAAGAA+TGG | 0.492139 | 3_2:+75700664 | None:intergenic |
| GATAGATGAAGAGAGAGAGA+AGG | 0.495307 | 3_2:+75703910 | None:intergenic |
| AATACATTCCTGAGGAAGCC+AGG | 0.496275 | 3_2:-75700421 | Msa0425310:CDS |
| TAGCATACAGTGGTAAGAAT+GGG | 0.504293 | 3_2:+75700665 | None:intergenic |
| TTAGCTTGAACTCCTTCACT+TGG | 0.505499 | 3_2:+75699225 | None:intergenic |
| AAGGCGACTGCTCGTGATTG+CGG | 0.515226 | 3_2:-75699934 | Msa0425310:CDS |
| ACCTTCAAAGAGAGACTGTA+TGG | 0.515882 | 3_2:+75700892 | None:intergenic |
| TTCATACCACTCGTGTCTCC+TGG | 0.517179 | 3_2:-75703886 | Msa0425310:five_prime_UTR |
| GTGGTGGTCTCTCATTCGCC+GGG | 0.524709 | 3_2:-75700523 | Msa0425310:CDS |
| TCAATACAGAGTCTTGATGT+TGG | 0.527647 | 3_2:-75702584 | Msa0425310:CDS |
| AAATGTCCTTGTTGATACAT+TGG | 0.532054 | 3_2:-75701369 | Msa0425310:CDS |
| GATTTGTGTGAGATGGTACC+AGG | 0.532501 | 3_2:+75703868 | None:intergenic |
| TACATTGGCTCTTGGACCAG+TGG | 0.533547 | 3_2:-75701354 | Msa0425310:CDS |
| ATAGCTGGTGATTGGTTACA+AGG | 0.536193 | 3_2:-75702892 | Msa0425310:intron |
| ACCCAAAAGCTGAATGCACC+CGG | 0.540450 | 3_2:+75700505 | None:intergenic |
| TTTGTAAGATTTGTGTGAGA+TGG | 0.542176 | 3_2:+75703861 | None:intergenic |
| ATCAGCTACGACGAGTGCGT+TGG | 0.544552 | 3_2:+75703973 | None:intergenic |
| AACAGAAGATTGGCAACTCA+AGG | 0.548096 | 3_2:-75699399 | Msa0425310:CDS |
| CCTACTAAAGCAACAGGTGG+TGG | 0.548441 | 3_2:-75700539 | Msa0425310:CDS |
| TGGCAATGCCACCCAAGATA+CGG | 0.550294 | 3_2:+75702560 | None:intergenic |
| TACTACCTATACAGTACGTA+TGG | 0.551044 | 3_2:-75702859 | Msa0425310:CDS |
| AGATTGGCAACTCAAGGAAA+GGG | 0.555844 | 3_2:-75699393 | Msa0425310:CDS |
| GGATATGGAAAAGGGGAGAT+CGG | 0.557120 | 3_2:-75702838 | Msa0425310:CDS |
| AAGATTGGCAACTCAAGGAA+AGG | 0.560058 | 3_2:-75699394 | Msa0425310:CDS |
| CAGGTTCAATGGCTCTGACT+CGG | 0.560976 | 3_2:+75699367 | None:intergenic |
| TTCAAGCTAAAAGGATATGT+GGG | 0.564130 | 3_2:-75699212 | Msa0425310:three_prime_UTR |
| GATGTTATTTGGAACAATTG+TGG | 0.566231 | 3_2:-75702785 | Msa0425310:CDS |
| TGATCGTGATATTATCTACA+TGG | 0.566672 | 3_2:-75701292 | Msa0425310:CDS |
| GATCTCATCTTCATAATGGA+TGG | 0.570928 | 3_2:+75700446 | None:intergenic |
| TGCCAAACATAACAGTGATA+GGG | 0.571327 | 3_2:+75699994 | None:intergenic |
| GTAAGATACTAGCCATGAAG+AGG | 0.572565 | 3_2:+75699958 | None:intergenic |
| CTCACTCTGCAAGAGAGACT+GGG | 0.572731 | 3_2:-75703838 | Msa0425310:five_prime_UTR |
| TGCATTAATTAAATGTAGAG+TGG | 0.572950 | 3_2:+75698986 | None:intergenic |
| TGCCGAAAATAGAAGTGAAG+TGG | 0.574265 | 3_2:+75702540 | None:intergenic |
| CGGCTAATCCACCGAAGACA+AGG | 0.577466 | 3_2:+75703756 | None:intergenic |
| AACATCAAGACTCTGTATTG+AGG | 0.584283 | 3_2:+75702586 | None:intergenic |
| AGCTTGCTTGCCCAATTTAG+GGG | 0.587066 | 3_2:-75701236 | Msa0425310:CDS |
| ACCTGCAGCAGCGTCAAAGG+GGG | 0.590199 | 3_2:+75701331 | None:intergenic |
| AAGAACTATACCAGAAGCAA+TGG | 0.596618 | 3_2:+75701202 | None:intergenic |
| TCTGTATTGAGGAGAATGCT+TGG | 0.601257 | 3_2:+75702597 | None:intergenic |
| GGCTCAATGCAGGAGTCCAT+AGG | 0.607848 | 3_2:+75700849 | None:intergenic |
| GCTATCATTAACATTCTCGA+AGG | 0.610234 | 3_2:-75701441 | Msa0425310:CDS |
| TACTCATATCAAGTTTGATG+AGG | 0.610558 | 3_2:+75698940 | None:intergenic |
| AGAGGGGCTTTGATCAGCAA+TGG | 0.613910 | 3_2:-75701463 | Msa0425310:CDS |
| TGCCCAATTTAGGGGTGCTG+CGG | 0.615185 | 3_2:-75701228 | Msa0425310:CDS |
| ACTCATATCAAGTTTGATGA+GGG | 0.621077 | 3_2:+75698941 | None:intergenic |
| GGTGCCCACCAACCAAGTGA+AGG | 0.638815 | 3_2:-75699237 | Msa0425310:three_prime_UTR |
| AACCTGCAGCAGCGTCAAAG+GGG | 0.643247 | 3_2:+75701330 | None:intergenic |
| GGCTCGTTCATCATTCCGTG+TGG | 0.650417 | 3_2:-75700738 | Msa0425310:CDS |
| TACGTATGGATATGGAAAAG+GGG | 0.653213 | 3_2:-75702845 | Msa0425310:CDS |
| GATAGGAAGAGTTAAACTCA+CGG | 0.654831 | 3_2:-75704071 | None:intergenic |
| ACTACGCAATTTGAGTGTGA+AGG | 0.660789 | 3_2:-75699267 | Msa0425310:three_prime_UTR |
| CAAGAGCCAATGTATCAACA+AGG | 0.662983 | 3_2:+75701363 | None:intergenic |
| ATGTTGGGCCGTATCTTGGG+TGG | 0.669526 | 3_2:-75702568 | Msa0425310:CDS |
| TCATGGCTAGTATCTTACAA+AGG | 0.673331 | 3_2:-75699953 | Msa0425310:CDS |
| CTCGAGAACAGCAACAACAG+CGG | 0.691907 | 3_2:+75703736 | None:intergenic |
| GAGATCTCAATACATTCCTG+AGG | 0.692563 | 3_2:-75700429 | Msa0425310:CDS |
| GTTCCTACTAAAGCAACAGG+TGG | 0.707303 | 3_2:-75700542 | Msa0425310:CDS |
| ATGGTACCAGGAGACACGAG+TGG | 0.721836 | 3_2:+75703880 | None:intergenic |
| AGGAGTCCATAGGAACACAA+AGG | 0.732126 | 3_2:+75700859 | None:intergenic |
| TCTGCATGTAGCTCTCCACA+CGG | 0.735568 | 3_2:+75700723 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTGAAATTGAATT+TGG | - | chr3_2:75699542-75699561 | Msa0425310:intron | 10.0% |
| !! | TATATGATTAACATATTTAA+AGG | + | chr3_2:75700616-75700635 | None:intergenic | 10.0% |
| !!! | TTTTTGTTTTATATGAAAAT+GGG | + | chr3_2:75703521-75703540 | None:intergenic | 10.0% |
| !!! | TTTTTTGTTTTATATGAAAA+TGG | + | chr3_2:75703522-75703541 | None:intergenic | 10.0% |
| !! | TATTCAAATTTCAATAATGT+TGG | - | chr3_2:75699831-75699850 | Msa0425310:intron | 15.0% |
| !! | ATCAAATCAACTATATTTAA+AGG | + | chr3_2:75699906-75699925 | None:intergenic | 15.0% |
| !! | AATATGTTAATCATATATGA+AGG | - | chr3_2:75700619-75700638 | Msa0425310:intron | 15.0% |
| !! | ACTATTATATAAGACATTTA+CGG | + | chr3_2:75700645-75700664 | None:intergenic | 15.0% |
| !! | AAATTTAGTAACTATTAACT+AGG | - | chr3_2:75700911-75700930 | Msa0425310:CDS | 15.0% |
| !! | TAAAAAATGATAACAGAATA+AGG | + | chr3_2:75701974-75701993 | None:intergenic | 15.0% |
| !!! | TTGTTTATTTTTTTATGTAC+AGG | - | chr3_2:75702959-75702978 | Msa0425310:intron | 15.0% |
| !! | ACAAAATTAAGACAATTAAA+GGG | + | chr3_2:75703966-75703985 | None:intergenic | 15.0% |
| !! | TACAAAATTAAGACAATTAA+AGG | + | chr3_2:75703967-75703986 | None:intergenic | 15.0% |
| !!! | TTACCTTACTTTTTTTTTGT+GGG | + | chr3_2:75698972-75698991 | None:intergenic | 20.0% |
| !!! | ATTACCTTACTTTTTTTTTG+TGG | + | chr3_2:75698973-75698992 | None:intergenic | 20.0% |
| !! | AAGAAATAATAAACAGAAGA+TGG | + | chr3_2:75699462-75699481 | None:intergenic | 20.0% |
| !!! | TTTTATGATTTTCTTAGCTT+TGG | - | chr3_2:75699633-75699652 | Msa0425310:intron | 20.0% |
| !! | AAATTTCAATAATGTTGGAT+GGG | - | chr3_2:75699836-75699855 | Msa0425310:intron | 20.0% |
| !!! | TAATAGGTTTCATTTTTGTA+TGG | - | chr3_2:75700069-75700088 | Msa0425310:intron | 20.0% |
| !!! | CTTTATTATCAAGTTTTATC+TGG | - | chr3_2:75700537-75700556 | Msa0425310:CDS | 20.0% |
| !!! | ACAACTACAAATTTTGAAAA+TGG | - | chr3_2:75700846-75700865 | Msa0425310:CDS | 20.0% |
| !! | TTATGTAAATATCAACTATG+TGG | - | chr3_2:75700955-75700974 | Msa0425310:intron | 20.0% |
| !! | TTCATTTAACGAAACAATTA+AGG | - | chr3_2:75701099-75701118 | Msa0425310:intron | 20.0% |
| !! | AAGTACAAAATGTAAAATGA+AGG | + | chr3_2:75701471-75701490 | None:intergenic | 20.0% |
| !! | ATTACTATGAATTTGAACTT+TGG | - | chr3_2:75701844-75701863 | Msa0425310:intron | 20.0% |
| !! | AATTAGTGCAATATAAAAGT+TGG | + | chr3_2:75702750-75702769 | None:intergenic | 20.0% |
| !! | GTTTGTAAAGAAAATGTATT+TGG | + | chr3_2:75703491-75703510 | None:intergenic | 20.0% |
| !! | AAAACAAAAAAGAAAGTTCT+TGG | - | chr3_2:75703531-75703550 | Msa0425310:intron | 20.0% |
| !!! | TTACTTATGTCAATTCTTTT+GGG | - | chr3_2:75703899-75703918 | Msa0425310:five_prime_UTR | 20.0% |
| ! | TTACCCACAAAAAAAAAGTA+AGG | - | chr3_2:75698966-75698985 | Msa0425310:three_prime_UTR | 25.0% |
| !!! | TTATATAGTGGTTTTGTGAT+GGG | + | chr3_2:75699046-75699065 | None:intergenic | 25.0% |
| ! | GAAATGTTGTAAAATTGGAT+TGG | + | chr3_2:75699176-75699195 | None:intergenic | 25.0% |
| ! | ACAGAGAAATGTTGTAAAAT+TGG | + | chr3_2:75699181-75699200 | None:intergenic | 25.0% |
| ! | TGAAAACGATGTAATTGAAA+TGG | - | chr3_2:75699567-75699586 | Msa0425310:intron | 25.0% |
| !!! | ATAGTAGTGATGTGTTTTTT+TGG | - | chr3_2:75699665-75699684 | Msa0425310:intron | 25.0% |
| !!! | TACTCTTTTTCTTTGCTTTT+TGG | - | chr3_2:75699708-75699727 | Msa0425310:intron | 25.0% |
| ! | CAAATTTCAATAATGTTGGA+TGG | - | chr3_2:75699835-75699854 | Msa0425310:intron | 25.0% |
| !!! | GTTAGTTTTAGTGATCTAAT+AGG | - | chr3_2:75700053-75700072 | Msa0425310:intron | 25.0% |
| !! | ATGTTATTTGGAACAATTGT+GGG | - | chr3_2:75700202-75700221 | Msa0425310:intron | 25.0% |
| ! | AGACTTCTTAATATGAAATC+AGG | - | chr3_2:75700311-75700330 | Msa0425310:intron | 25.0% |
| ! | GACTTCTTAATATGAAATCA+GGG | - | chr3_2:75700312-75700331 | Msa0425310:intron | 25.0% |
| ! | ACTTCTTAATATGAAATCAG+GGG | - | chr3_2:75700313-75700332 | Msa0425310:intron | 25.0% |
| !!! | TTTGAAAATGGTTTTAGATG+TGG | - | chr3_2:75700858-75700877 | Msa0425310:CDS | 25.0% |
| !!! | ATATCTTCATTGCTTGTTTT+TGG | - | chr3_2:75701157-75701176 | Msa0425310:intron | 25.0% |
| !!! | TTGGTTTTCATATCCAATTT+AGG | - | chr3_2:75701176-75701195 | Msa0425310:intron | 25.0% |
| !! | TGGTTTTCATATCCAATTTA+GGG | - | chr3_2:75701177-75701196 | Msa0425310:intron | 25.0% |
| ! | TAAGGGTAAAAATTGTATTG+TGG | + | chr3_2:75701407-75701426 | None:intergenic | 25.0% |
| ! | AACAATGACAAAACTATCTA+AGG | + | chr3_2:75701811-75701830 | None:intergenic | 25.0% |
| !! | TTTTGTCATTGTTTATACAG+TGG | - | chr3_2:75701818-75701837 | Msa0425310:intron | 25.0% |
| !!! | GGCCATTATTTTATTTTTTC+CGG | - | chr3_2:75701908-75701927 | Msa0425310:intron | 25.0% |
| !!! | GCCATTATTTTATTTTTTCC+GGG | - | chr3_2:75701909-75701928 | Msa0425310:intron | 25.0% |
| ! | TCCCGGAAAAAATAAAATAA+TGG | + | chr3_2:75701913-75701932 | None:intergenic | 25.0% |
| ! | TGTTGCAAAAATAAAACCAT+GGG | + | chr3_2:75702181-75702200 | None:intergenic | 25.0% |
| ! | ATGTTGCAAAAATAAAACCA+TGG | + | chr3_2:75702182-75702201 | None:intergenic | 25.0% |
| ! | ATTCATGTTATCTTCAATGT+TGG | - | chr3_2:75702200-75702219 | Msa0425310:intron | 25.0% |
| ! | TTCATGTTATCTTCAATGTT+GGG | - | chr3_2:75702201-75702220 | Msa0425310:intron | 25.0% |
| !! | ATAATTTGACTTTGTTACTG+TGG | - | chr3_2:75702407-75702426 | Msa0425310:intron | 25.0% |
| ! | TTGCAAAAAGCAAAAGATAT+AGG | - | chr3_2:75702856-75702875 | Msa0425310:CDS | 25.0% |
| !!! | AATAAATTTTGATCCCATTG+CGG | + | chr3_2:75703131-75703150 | None:intergenic | 25.0% |
| ! | TTAATCAATTACAGGTTCAA+TGG | + | chr3_2:75703633-75703652 | None:intergenic | 25.0% |
| !! | ACCTGTAATTGATTAAGTTT+TGG | - | chr3_2:75703637-75703656 | Msa0425310:intron | 25.0% |
| !! | CCTGTAATTGATTAAGTTTT+GGG | - | chr3_2:75703638-75703657 | Msa0425310:intron | 25.0% |
| !!! | TAATTGATTAAGTTTTGGGA+AGG | - | chr3_2:75703642-75703661 | Msa0425310:intron | 25.0% |
| !!! | ATTGCCTATTATTTTACTTG+AGG | - | chr3_2:75703850-75703869 | Msa0425310:five_prime_UTR | 25.0% |
| ! | TTCTCCTCAAGTAAAATAAT+AGG | + | chr3_2:75703857-75703876 | None:intergenic | 25.0% |
| !! | CTTACTTATGTCAATTCTTT+TGG | - | chr3_2:75703898-75703917 | Msa0425310:five_prime_UTR | 25.0% |
| !! | TACTTATGTCAATTCTTTTG+GGG | - | chr3_2:75703900-75703919 | Msa0425310:five_prime_UTR | 25.0% |
| ! | TGCATTAATTAAATGTAGAG+TGG | + | chr3_2:75704003-75704022 | None:intergenic | 25.0% |
| !!! | GTTATATAGTGGTTTTGTGA+TGG | + | chr3_2:75699047-75699066 | None:intergenic | 30.0% |
| TTTGTAAGATTTGTGTGAGA+TGG | + | chr3_2:75699128-75699147 | None:intergenic | 30.0% | |
| GAGAAGATAATTGTTCTTGA+AGG | + | chr3_2:75699325-75699344 | None:intergenic | 30.0% | |
| TCTCATTTATTCTCTCATGA+TGG | - | chr3_2:75699341-75699360 | Msa0425310:three_prime_UTR | 30.0% | |
| CTCATTTATTCTCTCATGAT+GGG | - | chr3_2:75699342-75699361 | Msa0425310:three_prime_UTR | 30.0% | |
| GAGTAAAAATCACAACTTCA+AGG | + | chr3_2:75699693-75699712 | None:intergenic | 30.0% | |
| CTGTATAGGTAGTAAACATA+TGG | + | chr3_2:75700121-75700140 | None:intergenic | 30.0% | |
| ! | GATGTTATTTGGAACAATTG+TGG | - | chr3_2:75700201-75700220 | Msa0425310:intron | 30.0% |
| AAAATGCTACGACATATGTA+TGG | + | chr3_2:75700281-75700300 | None:intergenic | 30.0% | |
| TATGATTACTTTATACACGC+AGG | - | chr3_2:75700561-75700580 | Msa0425310:intron | 30.0% | |
| TAGTTATTATAAGTACCACG+AGG | - | chr3_2:75700664-75700683 | Msa0425310:intron | 30.0% | |
| AGATGTGGATCATTATGTTT+AGG | - | chr3_2:75700873-75700892 | Msa0425310:CDS | 30.0% | |
| AAAGCAGAAGAAACAACTAA+TGG | + | chr3_2:75701204-75701223 | None:intergenic | 30.0% | |
| !! | TTCCAAAAGATGTTGATTTC+TGG | - | chr3_2:75701293-75701312 | Msa0425310:CDS | 30.0% |
| !! | TCCAAAAGATGTTGATTTCT+GGG | - | chr3_2:75701294-75701313 | Msa0425310:CDS | 30.0% |
| ! | GCATGTTTATCTTGTTTAGA+GGG | + | chr3_2:75701339-75701358 | None:intergenic | 30.0% |
| ! | TGCATGTTTATCTTGTTTAG+AGG | + | chr3_2:75701340-75701359 | None:intergenic | 30.0% |
| ! | ATTTTACAATATCCTCCAAG+TGG | - | chr3_2:75701359-75701378 | Msa0425310:CDS | 30.0% |
| TTACCCTTAAAATCTGACAA+AGG | - | chr3_2:75701418-75701437 | Msa0425310:CDS | 30.0% | |
| TACCCTTAAAATCTGACAAA+GGG | - | chr3_2:75701419-75701438 | Msa0425310:CDS | 30.0% | |
| ! | AACCCTTTGTCAGATTTTAA+GGG | + | chr3_2:75701424-75701443 | None:intergenic | 30.0% |
| ! | AAACCCTTTGTCAGATTTTA+AGG | + | chr3_2:75701425-75701444 | None:intergenic | 30.0% |
| AAGGCTATATTTCTTGGAAA+TGG | - | chr3_2:75701564-75701583 | Msa0425310:intron | 30.0% | |
| AAATGTCCTTGTTGATACAT+TGG | - | chr3_2:75701617-75701636 | Msa0425310:intron | 30.0% | |
| TGATCGTGATATTATCTACA+TGG | - | chr3_2:75701694-75701713 | Msa0425310:intron | 30.0% | |
| AATTCATGAACATCTGTACT+AGG | + | chr3_2:75702025-75702044 | None:intergenic | 30.0% | |
| ! | GATGAAAAAATAGCTTTGCT+TGG | - | chr3_2:75702069-75702088 | Msa0425310:intron | 30.0% |
| TTGCAAAAATAAAACCATGG+GGG | + | chr3_2:75702179-75702198 | None:intergenic | 30.0% | |
| GTTGCAAAAATAAAACCATG+GGG | + | chr3_2:75702180-75702199 | None:intergenic | 30.0% | |
| ATTGAAAGAATAGCATACAG+TGG | + | chr3_2:75702334-75702353 | None:intergenic | 30.0% | |
| ATGTAAATCACAGTACCAAT+GGG | + | chr3_2:75702371-75702390 | None:intergenic | 30.0% | |
| !! | TGTACTTTTGAAAGTTGTGT+TGG | - | chr3_2:75702507-75702526 | Msa0425310:CDS | 30.0% |
| TTGAGATCTCATCTTCATAA+TGG | + | chr3_2:75702547-75702566 | None:intergenic | 30.0% | |
| GATCAAGCATTATATCTAAG+CGG | + | chr3_2:75702671-75702690 | None:intergenic | 30.0% | |
| ! | TAGATTGTTTAAGATCAAGC+TGG | + | chr3_2:75702726-75702745 | None:intergenic | 30.0% |
| ATATTGCACTAATTTGAACC+TGG | - | chr3_2:75702756-75702775 | Msa0425310:intron | 30.0% | |
| AAGAAAGGGTTTATAATTCC+AGG | + | chr3_2:75702777-75702796 | None:intergenic | 30.0% | |
| CAGACATCGTATTTAAGAAA+GGG | + | chr3_2:75702791-75702810 | None:intergenic | 30.0% | |
| CTTTCTTAAATACGATGTCT+GGG | - | chr3_2:75702790-75702809 | Msa0425310:CDS | 30.0% | |
| GTAGAATTCAACAAGATAAC+TGG | + | chr3_2:75702820-75702839 | None:intergenic | 30.0% | |
| !!! | TTTTGCTTTTTGCAAGAAAG+GGG | + | chr3_2:75702851-75702870 | None:intergenic | 30.0% |
| !!! | CTTTTGCTTTTTGCAAGAAA+GGG | + | chr3_2:75702852-75702871 | None:intergenic | 30.0% |
| !!! | TCTTTTGCTTTTTGCAAGAA+AGG | + | chr3_2:75702853-75702872 | None:intergenic | 30.0% |
| GTTGATATGCCAGATAATAT+AGG | + | chr3_2:75703429-75703448 | None:intergenic | 30.0% | |
| TGAAAACAGAAACAGAAGAT+TGG | - | chr3_2:75703577-75703596 | Msa0425310:intron | 30.0% | |
| CCCAAAACTTAATCAATTAC+AGG | + | chr3_2:75703641-75703660 | None:intergenic | 30.0% | |
| TTCAAGCTAAAAGGATATGT+GGG | - | chr3_2:75703774-75703793 | Msa0425310:CDS | 30.0% | |
| AGTAAGAACTACTACCAAAA+TGG | + | chr3_2:75703884-75703903 | None:intergenic | 30.0% | |
| ! | ACTTATGTCAATTCTTTTGG+GGG | - | chr3_2:75703901-75703920 | Msa0425310:five_prime_UTR | 30.0% |
| ACTCATATCAAGTTTGATGA+GGG | + | chr3_2:75704048-75704067 | None:intergenic | 30.0% | |
| TACTCATATCAAGTTTGATG+AGG | + | chr3_2:75704049-75704068 | None:intergenic | 30.0% | |
| ATAGATGAAGAGAGAGAGAA+GGG | + | chr3_2:75699078-75699097 | None:intergenic | 35.0% | |
| TTGTTCTTCTACCTTGTCTT+CGG | - | chr3_2:75699219-75699238 | Msa0425310:three_prime_UTR | 35.0% | |
| !!! | GCGTGATTTTGAAATCTGAA+TGG | - | chr3_2:75699596-75699615 | Msa0425310:intron | 35.0% |
| TTCACCAACAACAATGTCAT+CGG | + | chr3_2:75699993-75700012 | None:intergenic | 35.0% | |
| ! | CATTTTTGTATGGCTATAGC+TGG | - | chr3_2:75700079-75700098 | Msa0425310:intron | 35.0% |
| TACTACCTATACAGTACGTA+TGG | - | chr3_2:75700127-75700146 | Msa0425310:intron | 35.0% | |
| CATATCCATACGTACTGTAT+AGG | + | chr3_2:75700135-75700154 | None:intergenic | 35.0% | |
| CTATACAGTACGTATGGATA+TGG | - | chr3_2:75700133-75700152 | Msa0425310:intron | 35.0% | |
| AGTACGTATGGATATGGAAA+AGG | - | chr3_2:75700139-75700158 | Msa0425310:intron | 35.0% | |
| GTACGTATGGATATGGAAAA+GGG | - | chr3_2:75700140-75700159 | Msa0425310:intron | 35.0% | |
| TACGTATGGATATGGAAAAG+GGG | - | chr3_2:75700141-75700160 | Msa0425310:intron | 35.0% | |
| AACTCTTCATTGCTGGATTT+GGG | - | chr3_2:75700173-75700192 | Msa0425310:intron | 35.0% | |
| TTTGGGTCTTCGATGTTATT+TGG | - | chr3_2:75700190-75700209 | Msa0425310:intron | 35.0% | |
| AACATCAAGACTCTGTATTG+AGG | + | chr3_2:75700403-75700422 | None:intergenic | 35.0% | |
| TCAATACAGAGTCTTGATGT+TGG | - | chr3_2:75700402-75700421 | Msa0425310:CDS | 35.0% | |
| CAATACAGAGTCTTGATGTT+GGG | - | chr3_2:75700403-75700422 | Msa0425310:CDS | 35.0% | |
| !! | TGCCACTTCACTTCTATTTT+CGG | - | chr3_2:75700444-75700463 | Msa0425310:CDS | 35.0% |
| !! | CAGGAAGTGCTATAATTTGA+AGG | - | chr3_2:75700580-75700599 | Msa0425310:intron | 35.0% |
| ! | GAAGTGCTATAATTTGAAGG+TGG | - | chr3_2:75700583-75700602 | Msa0425310:intron | 35.0% |
| ACTAAATTTATGCAACACGC+AGG | + | chr3_2:75700900-75700919 | None:intergenic | 35.0% | |
| ATATCAACTATGTGGTGTAG+TGG | - | chr3_2:75700963-75700982 | Msa0425310:intron | 35.0% | |
| ACAAACACACTAGTTGCTAT+CGG | - | chr3_2:75701042-75701061 | Msa0425310:intron | 35.0% | |
| TAACGAAACAATTAAGGCAG+AGG | - | chr3_2:75701105-75701124 | Msa0425310:intron | 35.0% | |
| ! | ACAACTAATGGACCCTAAAT+TGG | + | chr3_2:75701192-75701211 | None:intergenic | 35.0% |
| !! | CCAAAAGATGTTGATTTCTG+GGG | - | chr3_2:75701295-75701314 | Msa0425310:CDS | 35.0% |
| GTGAGCAAAAATCACTTTGT+TGG | + | chr3_2:75701385-75701404 | None:intergenic | 35.0% | |
| AAATGAAGGAATCAAGACGA+AGG | + | chr3_2:75701457-75701476 | None:intergenic | 35.0% | |
| TTTCCACATGAATCTATCAG+AGG | - | chr3_2:75701505-75701524 | Msa0425310:intron | 35.0% | |
| TTCCACATGAATCTATCAGA+GGG | - | chr3_2:75701506-75701525 | Msa0425310:intron | 35.0% | |
| GCTATCATTAACATTCTCGA+AGG | - | chr3_2:75701545-75701564 | Msa0425310:intron | 35.0% | |
| TTCTCGAAGGCTATATTTCT+TGG | - | chr3_2:75701558-75701577 | Msa0425310:intron | 35.0% | |
| !! | GTCTTGTTGCCATATTTTCT+GGG | - | chr3_2:75701586-75701605 | Msa0425310:intron | 35.0% |
| TCTACATGGACAGAAAACTA+TGG | - | chr3_2:75701708-75701727 | Msa0425310:intron | 35.0% | |
| AAGAACTATACCAGAAGCAA+TGG | + | chr3_2:75701787-75701806 | None:intergenic | 35.0% | |
| !! | ACTTTGGAACTCTTAATGTG+TGG | - | chr3_2:75701860-75701879 | Msa0425310:intron | 35.0% |
| CATTAATCTACCTAAGGAGT+GGG | - | chr3_2:75701883-75701902 | Msa0425310:intron | 35.0% | |
| ATTTCAACATACATCACTCC+CGG | + | chr3_2:75701930-75701949 | None:intergenic | 35.0% | |
| ! | TTCATCTGAAACGCAATGAA+TGG | + | chr3_2:75702055-75702074 | None:intergenic | 35.0% |
| TGTATACCTTTGTGTTCCTA+TGG | - | chr3_2:75702121-75702140 | Msa0425310:intron | 35.0% | |
| TAGCATACAGTGGTAAGAAT+GGG | + | chr3_2:75702324-75702343 | None:intergenic | 35.0% | |
| ATAGCATACAGTGGTAAGAA+TGG | + | chr3_2:75702325-75702344 | None:intergenic | 35.0% | |
| GATGTAAATCACAGTACCAA+TGG | + | chr3_2:75702372-75702391 | None:intergenic | 35.0% | |
| ! | AAAGTTGTGTTGGCATATTC+TGG | - | chr3_2:75702517-75702536 | Msa0425310:CDS | 35.0% |
| ! | GATCTCATCTTCATAATGGA+TGG | + | chr3_2:75702543-75702562 | None:intergenic | 35.0% |
| AATGCGGAAAAAGTTCATGA+TGG | + | chr3_2:75702595-75702614 | None:intergenic | 35.0% | |
| CAAAAATGTTCAGAGGAATG+CGG | + | chr3_2:75702611-75702630 | None:intergenic | 35.0% | |
| ACACACACAAAAATGTTCAG+AGG | + | chr3_2:75702618-75702637 | None:intergenic | 35.0% | |
| AAGCATTATATCTAAGCGGT+AGG | + | chr3_2:75702667-75702686 | None:intergenic | 35.0% | |
| CCAGACATCGTATTTAAGAA+AGG | + | chr3_2:75702792-75702811 | None:intergenic | 35.0% | |
| CCTTTCTTAAATACGATGTC+TGG | - | chr3_2:75702789-75702808 | Msa0425310:CDS | 35.0% | |
| TTCCCTATCACTGTTATGTT+TGG | - | chr3_2:75702990-75703009 | Msa0425310:intron | 35.0% | |
| TGCCAAACATAACAGTGATA+GGG | + | chr3_2:75702995-75703014 | None:intergenic | 35.0% | |
| ATGCCAAACATAACAGTGAT+AGG | + | chr3_2:75702996-75703015 | None:intergenic | 35.0% | |
| TCATGGCTAGTATCTTACAA+AGG | - | chr3_2:75703033-75703052 | Msa0425310:intron | 35.0% | |
| ATGTTGAATTTGTACCGCAA+TGG | - | chr3_2:75703114-75703133 | Msa0425310:intron | 35.0% | |
| TGTTGAATTTGTACCGCAAT+GGG | - | chr3_2:75703115-75703134 | Msa0425310:intron | 35.0% | |
| TATACACTACACAAAGCCAA+AGG | + | chr3_2:75703234-75703253 | None:intergenic | 35.0% | |
| GAGGCAGGATATATAACAAA+GGG | + | chr3_2:75703259-75703278 | None:intergenic | 35.0% | |
| TGAGGCAGGATATATAACAA+AGG | + | chr3_2:75703260-75703279 | None:intergenic | 35.0% | |
| GATCTACCAAAAATAGCTTG+AGG | + | chr3_2:75703278-75703297 | None:intergenic | 35.0% | |
| ! | CATCTAGCTTGAAACATGTT+TGG | + | chr3_2:75703319-75703338 | None:intergenic | 35.0% |
| ATTGCCCACTTTGGTTAATT+GGG | - | chr3_2:75703339-75703358 | Msa0425310:intron | 35.0% | |
| TGCCTTTAAGTAAAAGTCCA+TGG | - | chr3_2:75703373-75703392 | Msa0425310:intron | 35.0% | |
| GCCTTTAAGTAAAAGTCCAT+GGG | - | chr3_2:75703374-75703393 | Msa0425310:intron | 35.0% | |
| ! | ACCCATGGACTTTTACTTAA+AGG | + | chr3_2:75703378-75703397 | None:intergenic | 35.0% |
| TATGCCAGATAATATAGGCA+GGG | + | chr3_2:75703424-75703443 | None:intergenic | 35.0% | |
| ATATGCCAGATAATATAGGC+AGG | + | chr3_2:75703425-75703444 | None:intergenic | 35.0% | |
| TTATCTGGCATATCAACACA+TGG | - | chr3_2:75703432-75703451 | Msa0425310:intron | 35.0% | |
| GACAGAAACTGCATTATGTA+AGG | + | chr3_2:75703689-75703708 | None:intergenic | 35.0% | |
| TTTGAGTGTGAAGGTAAATC+TGG | - | chr3_2:75703728-75703747 | Msa0425310:CDS | 35.0% | |
| GTTCAAGCTAAAAGGATATG+TGG | - | chr3_2:75703773-75703792 | Msa0425310:CDS | 35.0% | |
| ! | TTGAGGAGAAATCTCCATTT+TGG | - | chr3_2:75703867-75703886 | Msa0425310:five_prime_UTR | 35.0% |
| ! | CTTATGTCAATTCTTTTGGG+GGG | - | chr3_2:75703902-75703921 | Msa0425310:five_prime_UTR | 35.0% |
| GGGTGAAGAAGGTTATATAG+TGG | + | chr3_2:75699058-75699077 | None:intergenic | 40.0% | |
| GATAGATGAAGAGAGAGAGA+AGG | + | chr3_2:75699079-75699098 | None:intergenic | 40.0% | |
| TCTCTGTTAACTCGCGATAA+TGG | - | chr3_2:75699194-75699213 | Msa0425310:three_prime_UTR | 40.0% | |
| ! | ATAGCTGGTGATTGGTTACA+AGG | - | chr3_2:75700094-75700113 | Msa0425310:intron | 40.0% |
| CAACTCTTCATTGCTGGATT+TGG | - | chr3_2:75700172-75700191 | Msa0425310:intron | 40.0% | |
| CTTAATATGAAATCAGGGGC+CGG | - | chr3_2:75700317-75700336 | Msa0425310:intron | 40.0% | |
| TCTGTATTGAGGAGAATGCT+TGG | + | chr3_2:75700392-75700411 | None:intergenic | 40.0% | |
| TGCCGAAAATAGAAGTGAAG+TGG | + | chr3_2:75700449-75700468 | None:intergenic | 40.0% | |
| ! | TATTTTCGGCATTTGAGTCG+TGG | - | chr3_2:75700458-75700477 | Msa0425310:CDS | 40.0% |
| ! | TTGGAATCAACCTAGTTTGC+AGG | + | chr3_2:75701279-75701298 | None:intergenic | 40.0% |
| ! | CCCCAGAAATCAACATCTTT+TGG | + | chr3_2:75701298-75701317 | None:intergenic | 40.0% |
| AAATCACTTTGTTGGCCACT+TGG | + | chr3_2:75701377-75701396 | None:intergenic | 40.0% | |
| TCCACATGAATCTATCAGAG+GGG | - | chr3_2:75701507-75701526 | Msa0425310:intron | 40.0% | |
| !!! | GGTCTTGTTGCCATATTTTC+TGG | - | chr3_2:75701585-75701604 | Msa0425310:intron | 40.0% |
| TCCAAACAGCCCAGAAAATA+TGG | + | chr3_2:75701598-75701617 | None:intergenic | 40.0% | |
| CAAGAGCCAATGTATCAACA+AGG | + | chr3_2:75701626-75701645 | None:intergenic | 40.0% | |
| !! | CTTGTTGATACATTGGCTCT+TGG | - | chr3_2:75701624-75701643 | Msa0425310:intron | 40.0% |
| ! | GCTGCAGGTTTTCTTACAAT+TGG | - | chr3_2:75701669-75701688 | Msa0425310:intron | 40.0% |
| GTGTGGCATTAATCTACCTA+AGG | - | chr3_2:75701877-75701896 | Msa0425310:intron | 40.0% | |
| GCATTAATCTACCTAAGGAG+TGG | - | chr3_2:75701882-75701901 | Msa0425310:intron | 40.0% | |
| ACCTTCAAAGAGAGACTGTA+TGG | + | chr3_2:75702097-75702116 | None:intergenic | 40.0% | |
| TAAATCACAGTACCAATGGG+TGG | + | chr3_2:75702368-75702387 | None:intergenic | 40.0% | |
| GAGATCTCAATACATTCCTG+AGG | - | chr3_2:75702557-75702576 | Msa0425310:CDS | 40.0% | |
| TCTTAAATACGATGTCTGGG+TGG | - | chr3_2:75702793-75702812 | Msa0425310:CDS | 40.0% | |
| ! | TTTTGCAAGAAAGGGGTTGT+AGG | + | chr3_2:75702844-75702863 | None:intergenic | 40.0% |
| ACAGTTAGAGATAGAGAGAG+AGG | + | chr3_2:75702895-75702914 | None:intergenic | 40.0% | |
| ! | GTGCTCAATTTTCCTCTTCA+TGG | - | chr3_2:75703016-75703035 | Msa0425310:intron | 40.0% |
| GTAAGATACTAGCCATGAAG+AGG | + | chr3_2:75703031-75703050 | None:intergenic | 40.0% | |
| AGCAACAGATCATAGTGTGA+GGG | + | chr3_2:75703093-75703112 | None:intergenic | 40.0% | |
| AAGCAACAGATCATAGTGTG+AGG | + | chr3_2:75703094-75703113 | None:intergenic | 40.0% | |
| TATCTTTGTCACACAGTGAC+AGG | + | chr3_2:75703165-75703184 | None:intergenic | 40.0% | |
| GCAATTTCTCAGATAAGACG+CGG | + | chr3_2:75703204-75703223 | None:intergenic | 40.0% | |
| AGAAATTGCTCCTACACCTT+TGG | - | chr3_2:75703215-75703234 | Msa0425310:intron | 40.0% | |
| !! | ATCCTGCCTCAAGCTATTTT+TGG | - | chr3_2:75703269-75703288 | Msa0425310:intron | 40.0% |
| TACCAAAAATAGCTTGAGGC+AGG | + | chr3_2:75703274-75703293 | None:intergenic | 40.0% | |
| GATTGCCCACTTTGGTTAAT+TGG | - | chr3_2:75703338-75703357 | Msa0425310:intron | 40.0% | |
| CATGCCCAATTAACCAAAGT+GGG | + | chr3_2:75703346-75703365 | None:intergenic | 40.0% | |
| AGCAGCAAAGAAAAAACCCA+TGG | + | chr3_2:75703393-75703412 | None:intergenic | 40.0% | |
| !!! | GGGTTTTTTCTTTGCTGCTA+AGG | - | chr3_2:75703394-75703413 | Msa0425310:intron | 40.0% |
| ! | ATGTATTTGGTTCGTGTAGC+TGG | + | chr3_2:75703478-75703497 | None:intergenic | 40.0% |
| AACAGAAGATTGGCAACTCA+AGG | - | chr3_2:75703587-75703606 | Msa0425310:intron | 40.0% | |
| AAGATTGGCAACTCAAGGAA+AGG | - | chr3_2:75703592-75703611 | Msa0425310:intron | 40.0% | |
| AGATTGGCAACTCAAGGAAA+GGG | - | chr3_2:75703593-75703612 | Msa0425310:intron | 40.0% | |
| ACTACGCAATTTGAGTGTGA+AGG | - | chr3_2:75703719-75703738 | Msa0425310:CDS | 40.0% | |
| ! | TTAGCTTGAACTCCTTCACT+TGG | + | chr3_2:75703764-75703783 | None:intergenic | 40.0% |
| GTGAAGGAGTTCAAGCTAAA+AGG | - | chr3_2:75703765-75703784 | Msa0425310:CDS | 40.0% | |
| GGATCTAAGTTTGTCTCGTT+GGG | - | chr3_2:75703927-75703946 | Msa0425310:five_prime_UTR | 40.0% | |
| GATTTGTGTGAGATGGTACC+AGG | + | chr3_2:75699121-75699140 | None:intergenic | 45.0% | |
| TTCTTCTACCTTGTCTTCGG+TGG | - | chr3_2:75699222-75699241 | Msa0425310:three_prime_UTR | 45.0% | |
| GCTTCCGATGACATTGTTGT+TGG | - | chr3_2:75699986-75700005 | Msa0425310:CDS | 45.0% | |
| GTATGGCTATAGCTGGTGAT+TGG | - | chr3_2:75700086-75700105 | Msa0425310:intron | 45.0% | |
| GGATATGGAAAAGGGGAGAT+CGG | - | chr3_2:75700148-75700167 | Msa0425310:intron | 45.0% | |
| ATCGGACAACTCTTCATTGC+TGG | - | chr3_2:75700166-75700185 | Msa0425310:intron | 45.0% | |
| AAGTCACACAAGCTCTCTTC+CGG | + | chr3_2:75700339-75700358 | None:intergenic | 45.0% | |
| TTGATGTTGGGCCGTATCTT+GGG | - | chr3_2:75700415-75700434 | Msa0425310:CDS | 45.0% | |
| GCTAGTTGCTGAGCATTTCA+AGG | - | chr3_2:75700480-75700499 | Msa0425310:CDS | 45.0% | |
| TTGCTGAGCATTTCAAGGTG+AGG | - | chr3_2:75700485-75700504 | Msa0425310:CDS | 45.0% | |
| AGTACCACGAGGAGAAAAGT+AGG | - | chr3_2:75700675-75700694 | Msa0425310:CDS | 45.0% | |
| !! | ACAACCTACTTTTCTCCTCG+TGG | + | chr3_2:75700682-75700701 | None:intergenic | 45.0% |
| ! | AGTCACTGAGGCATGGTTTT+TGG | - | chr3_2:75700986-75701005 | Msa0425310:intron | 45.0% |
| GCAGAGGCAATACAGTTTGA+TGG | - | chr3_2:75701121-75701140 | Msa0425310:intron | 45.0% | |
| TCAACGTGTTCCTGCAAACT+AGG | - | chr3_2:75701266-75701285 | Msa0425310:CDS | 45.0% | |
| ! | GCCATATTTTCTGGGCTGTT+TGG | - | chr3_2:75701594-75701613 | Msa0425310:intron | 45.0% |
| ! | AGAGCTTGCTTGCCCAATTT+AGG | - | chr3_2:75701748-75701767 | Msa0425310:intron | 45.0% |
| ! | GAGCTTGCTTGCCCAATTTA+GGG | - | chr3_2:75701749-75701768 | Msa0425310:intron | 45.0% |
| ! | AGCTTGCTTGCCCAATTTAG+GGG | - | chr3_2:75701750-75701769 | Msa0425310:intron | 45.0% |
| GCCATACAGTCTCTCTTTGA+AGG | - | chr3_2:75702093-75702112 | Msa0425310:intron | 45.0% | |
| AGGAGTCCATAGGAACACAA+AGG | + | chr3_2:75702130-75702149 | None:intergenic | 45.0% | |
| TCATCATTTGGGCTCAATGC+AGG | + | chr3_2:75702150-75702169 | None:intergenic | 45.0% | |
| GGGGGATCTCTTCATCATTT+GGG | + | chr3_2:75702161-75702180 | None:intergenic | 45.0% | |
| TGGGGGATCTCTTCATCATT+TGG | + | chr3_2:75702162-75702181 | None:intergenic | 45.0% | |
| AATGATGAAGAGATCCCCCA+TGG | - | chr3_2:75702162-75702181 | Msa0425310:intron | 45.0% | |
| ! | CTCGCTTGCATCTAAGTTGA+TGG | - | chr3_2:75702227-75702246 | Msa0425310:intron | 45.0% |
| GCAGTTCCTACTAAAGCAAC+AGG | - | chr3_2:75702441-75702460 | Msa0425310:intron | 45.0% | |
| GTTCCTACTAAAGCAACAGG+TGG | - | chr3_2:75702444-75702463 | Msa0425310:intron | 45.0% | |
| AATACATTCCTGAGGAAGCC+AGG | - | chr3_2:75702565-75702584 | Msa0425310:CDS | 45.0% | |
| ! | AAAGTTCATGATGGTGCTCC+TGG | + | chr3_2:75702586-75702605 | None:intergenic | 45.0% |
| GTTAGAGATAGAGAGAGAGG+CGG | + | chr3_2:75702892-75702911 | None:intergenic | 45.0% | |
| CATAGTGTGAGGGTCTTACT+TGG | + | chr3_2:75703083-75703102 | None:intergenic | 45.0% | |
| ! | CTACACAAAGCCAAAGGTGT+AGG | + | chr3_2:75703228-75703247 | None:intergenic | 45.0% |
| AGATCTCTGATACTGCAGCA+AGG | - | chr3_2:75703293-75703312 | Msa0425310:intron | 45.0% | |
| AGCTAGATGATTGCCCACTT+TGG | - | chr3_2:75703330-75703349 | Msa0425310:intron | 45.0% | |
| GCATGCCCAATTAACCAAAG+TGG | + | chr3_2:75703347-75703366 | None:intergenic | 45.0% | |
| CTTGCCCTGCCTATATTATC+TGG | - | chr3_2:75703417-75703436 | Msa0425310:intron | 45.0% | |
| AACTCCTTCACTTGGTTGGT+GGG | + | chr3_2:75703756-75703775 | None:intergenic | 45.0% | |
| CTTGAACTCCTTCACTTGGT+TGG | + | chr3_2:75703760-75703779 | None:intergenic | 45.0% | |
| !! | ATGTCAATTCTTTTGGGGGG+CGG | - | chr3_2:75703905-75703924 | Msa0425310:five_prime_UTR | 45.0% |
| GGGATCTAAGTTTGTCTCGT+TGG | - | chr3_2:75703926-75703945 | Msa0425310:five_prime_UTR | 45.0% | |
| GAGAGAGAGAAGGGTGAAGA+AGG | + | chr3_2:75699069-75699088 | None:intergenic | 50.0% | |
| TTCATACCACTCGTGTCTCC+TGG | - | chr3_2:75699100-75699119 | Msa0425310:three_prime_UTR | 50.0% | |
| ACTCACTCTGCAAGAGAGAC+TGG | - | chr3_2:75699147-75699166 | Msa0425310:three_prime_UTR | 50.0% | |
| CTCACTCTGCAAGAGAGACT+GGG | - | chr3_2:75699148-75699167 | Msa0425310:three_prime_UTR | 50.0% | |
| CTCGAGAACAGCAACAACAG+CGG | + | chr3_2:75699253-75699272 | None:intergenic | 50.0% | |
| GGTGATGCAGCTTGCAATGT+AGG | + | chr3_2:75700371-75700390 | None:intergenic | 50.0% | |
| CTTGATGTTGGGCCGTATCT+TGG | - | chr3_2:75700414-75700433 | Msa0425310:CDS | 50.0% | |
| TGGCAATGCCACCCAAGATA+CGG | + | chr3_2:75700429-75700448 | None:intergenic | 50.0% | |
| TCACTTTGTTGGCCACTTGG+AGG | + | chr3_2:75701374-75701393 | None:intergenic | 50.0% | |
| GCCCCTCTGATAGATTCATG+TGG | + | chr3_2:75701511-75701530 | None:intergenic | 50.0% | |
| ! | AGAGGGGCTTTGATCAGCAA+TGG | - | chr3_2:75701523-75701542 | Msa0425310:intron | 50.0% |
| !! | TACATTGGCTCTTGGACCAG+TGG | - | chr3_2:75701632-75701651 | Msa0425310:intron | 50.0% |
| AAACCTGCAGCAGCGTCAAA+GGG | + | chr3_2:75701660-75701679 | None:intergenic | 50.0% | |
| AAAACCTGCAGCAGCGTCAA+AGG | + | chr3_2:75701661-75701680 | None:intergenic | 50.0% | |
| AATCTACCTAAGGAGTGGGC+TGG | - | chr3_2:75701887-75701906 | Msa0425310:intron | 50.0% | |
| TCTGCATGTAGCTCTCCACA+CGG | + | chr3_2:75702266-75702285 | None:intergenic | 50.0% | |
| TATACTCTCCCTCCACCCAT+TGG | - | chr3_2:75702353-75702372 | Msa0425310:intron | 50.0% | |
| TCACAGTACCAATGGGTGGA+GGG | + | chr3_2:75702364-75702383 | None:intergenic | 50.0% | |
| ATCACAGTACCAATGGGTGG+AGG | + | chr3_2:75702365-75702384 | None:intergenic | 50.0% | |
| !! | CCACCACCTGTTGCTTTAGT+AGG | + | chr3_2:75702450-75702469 | None:intergenic | 50.0% |
| CCTACTAAAGCAACAGGTGG+TGG | - | chr3_2:75702447-75702466 | Msa0425310:intron | 50.0% | |
| ACCCAAAAGCTGAATGCACC+CGG | + | chr3_2:75702484-75702503 | None:intergenic | 50.0% | |
| !! | CAGGTTCAATGGCTCTGACT+CGG | + | chr3_2:75703622-75703641 | None:intergenic | 50.0% |
| GAACTCCTTCACTTGGTTGG+TGG | + | chr3_2:75703757-75703776 | None:intergenic | 50.0% | |
| !! | TGTCAATTCTTTTGGGGGGC+GGG | - | chr3_2:75703906-75703925 | Msa0425310:five_prime_UTR | 50.0% |
| ATCAGCTACGACGAGTGCGT+TGG | + | chr3_2:75699016-75699035 | None:intergenic | 55.0% | |
| ATGGTACCAGGAGACACGAG+TGG | + | chr3_2:75699109-75699128 | None:intergenic | 55.0% | |
| CGGCTAATCCACCGAAGACA+AGG | + | chr3_2:75699233-75699252 | None:intergenic | 55.0% | |
| ATGTTGGGCCGTATCTTGGG+TGG | - | chr3_2:75700418-75700437 | Msa0425310:CDS | 55.0% | |
| ! | GTGGTGTAGTGGAGTCACTG+AGG | - | chr3_2:75700974-75700993 | Msa0425310:intron | 55.0% |
| ! | GTAGTGGAGTCACTGAGGCA+TGG | - | chr3_2:75700979-75700998 | Msa0425310:intron | 55.0% |
| AACCTGCAGCAGCGTCAAAG+GGG | + | chr3_2:75701659-75701678 | None:intergenic | 55.0% | |
| !! | TGCCCAATTTAGGGGTGCTG+CGG | - | chr3_2:75701758-75701777 | Msa0425310:intron | 55.0% |
| CACCGCAGCACCCCTAAATT+GGG | + | chr3_2:75701763-75701782 | None:intergenic | 55.0% | |
| TAATGGCCAGCCCACTCCTT+AGG | + | chr3_2:75701896-75701915 | None:intergenic | 55.0% | |
| GGCTCAATGCAGGAGTCCAT+AGG | + | chr3_2:75702140-75702159 | None:intergenic | 55.0% | |
| GGCTCGTTCATCATTCCGTG+TGG | - | chr3_2:75702248-75702267 | Msa0425310:intron | 55.0% | |
| ! | GCCGGGTGCATTCAGCTTTT+GGG | - | chr3_2:75702480-75702499 | Msa0425310:intron | 55.0% |
| AAGGCGACTGCTCGTGATTG+CGG | - | chr3_2:75703052-75703071 | Msa0425310:intron | 55.0% | |
| ACCTGCAGCAGCGTCAAAGG+GGG | + | chr3_2:75701658-75701677 | None:intergenic | 60.0% | |
| CCACCGCAGCACCCCTAAAT+TGG | + | chr3_2:75701764-75701783 | None:intergenic | 60.0% | |
| !! | CCAATTTAGGGGTGCTGCGG+TGG | - | chr3_2:75701761-75701780 | Msa0425310:intron | 60.0% |
| ! | GGTGGTGGTCTCTCATTCGC+CGG | - | chr3_2:75702462-75702481 | Msa0425310:intron | 60.0% |
| GTGGTGGTCTCTCATTCGCC+GGG | - | chr3_2:75702463-75702482 | Msa0425310:intron | 60.0% | |
| ! | CGCCGGGTGCATTCAGCTTT+TGG | - | chr3_2:75702479-75702498 | Msa0425310:intron | 60.0% |
| ATGGTGCTCCTGGCTTCCTC+AGG | + | chr3_2:75702576-75702595 | None:intergenic | 60.0% | |
| GGTGCCCACCAACCAAGTGA+AGG | - | chr3_2:75703749-75703768 | Msa0425310:CDS | 60.0% | |
| GCTGCGGTGGCCATTGCTTC+TGG | - | chr3_2:75701774-75701793 | Msa0425310:intron | 65.0% | |
| GCAGCGTCAAAGGGGGCCAC+TGG | + | chr3_2:75701651-75701670 | None:intergenic | 70.0% | |
| GCCCCCTTTGACGCTGCTGC+AGG | - | chr3_2:75701654-75701673 | Msa0425310:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 75698925 | 75704083 | 75698925 | ID=Msa0425310;Name=Msa0425310 |
| chr3_2 | mRNA | 75698925 | 75704083 | 75698925 | ID=Msa0425310-mRNA-1;Parent=Msa0425310;Name=Msa0425310-mRNA-1;_AED=0.07;_eAED=0.07;_QI=288|1|1|1|1|1|8|439|459 |
| chr3_2 | exon | 75698925 | 75699422 | 75698925 | ID=Msa0425310-mRNA-1:exon:19447;Parent=Msa0425310-mRNA-1 |
| chr3_2 | exon | 75699925 | 75700027 | 75699925 | ID=Msa0425310-mRNA-1:exon:19446;Parent=Msa0425310-mRNA-1 |
| chr3_2 | exon | 75700358 | 75700573 | 75700358 | ID=Msa0425310-mRNA-1:exon:19445;Parent=Msa0425310-mRNA-1 |
| chr3_2 | exon | 75700673 | 75700938 | 75700673 | ID=Msa0425310-mRNA-1:exon:19444;Parent=Msa0425310-mRNA-1 |
| chr3_2 | exon | 75701213 | 75701483 | 75701213 | ID=Msa0425310-mRNA-1:exon:19443;Parent=Msa0425310-mRNA-1 |
| chr3_2 | exon | 75702507 | 75702675 | 75702507 | ID=Msa0425310-mRNA-1:exon:19442;Parent=Msa0425310-mRNA-1 |
| chr3_2 | exon | 75702766 | 75702910 | 75702766 | ID=Msa0425310-mRNA-1:exon:19441;Parent=Msa0425310-mRNA-1 |
| chr3_2 | exon | 75703645 | 75704083 | 75703645 | ID=Msa0425310-mRNA-1:exon:19440;Parent=Msa0425310-mRNA-1 |
| chr3_2 | five_prime_UTR | 75703796 | 75704083 | 75703796 | ID=Msa0425310-mRNA-1:five_prime_utr;Parent=Msa0425310-mRNA-1 |
| chr3_2 | CDS | 75703645 | 75703795 | 75703645 | ID=Msa0425310-mRNA-1:cds;Parent=Msa0425310-mRNA-1 |
| chr3_2 | CDS | 75702766 | 75702910 | 75702766 | ID=Msa0425310-mRNA-1:cds;Parent=Msa0425310-mRNA-1 |
| chr3_2 | CDS | 75702507 | 75702675 | 75702507 | ID=Msa0425310-mRNA-1:cds;Parent=Msa0425310-mRNA-1 |
| chr3_2 | CDS | 75701213 | 75701483 | 75701213 | ID=Msa0425310-mRNA-1:cds;Parent=Msa0425310-mRNA-1 |
| chr3_2 | CDS | 75700673 | 75700938 | 75700673 | ID=Msa0425310-mRNA-1:cds;Parent=Msa0425310-mRNA-1 |
| chr3_2 | CDS | 75700358 | 75700573 | 75700358 | ID=Msa0425310-mRNA-1:cds;Parent=Msa0425310-mRNA-1 |
| chr3_2 | CDS | 75699925 | 75700027 | 75699925 | ID=Msa0425310-mRNA-1:cds;Parent=Msa0425310-mRNA-1 |
| chr3_2 | CDS | 75699364 | 75699422 | 75699364 | ID=Msa0425310-mRNA-1:cds;Parent=Msa0425310-mRNA-1 |
| chr3_2 | three_prime_UTR | 75698925 | 75699363 | 75698925 | ID=Msa0425310-mRNA-1:three_prime_utr;Parent=Msa0425310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
