AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0750180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0750180 MtrunA17_Chr5g0396311 98.367 551 9 0 1 551 1 551 0.0 1122
Msa0750180 MtrunA17_Chr5g0396331 81.136 546 101 1 1 546 1 544 0.0 938
Msa0750180 MtrunA17_Chr8g0370701 64.154 544 193 2 1 542 43 586 0.0 772
Msa0750180 MtrunA17_Chr8g0370731 64.509 479 168 1 67 543 20 498 0.0 667
Msa0750180 MtrunA17_Chr4g0068151 52.087 551 251 4 9 546 15 565 0.0 595
Msa0750180 MtrunA17_Chr2g0301671 51.906 551 252 4 9 546 15 565 0.0 594
Msa0750180 MtrunA17_Chr3g0109731 50.452 553 260 3 1 539 1 553 0.0 585
Msa0750180 MtrunA17_Chr5g0433241 53.370 549 240 7 8 544 8 552 0.0 584
Msa0750180 MtrunA17_Chr5g0433231 50.903 554 255 8 1 541 1 550 0.0 535
Msa0750180 MtrunA17_Chr5g0433221 50.540 556 258 8 1 543 1 552 0.0 530
Msa0750180 MtrunA17_Chr5g0406681 49.360 547 264 9 2 540 28 569 0.0 528
Msa0750180 MtrunA17_Chr6g0471311 50.179 560 256 8 1 543 1 554 2.04e-179 517
Msa0750180 MtrunA17_Chr2g0327341 29.135 532 319 16 29 538 42 537 4.18e-47 172
Msa0750180 MtrunA17_Chr8g0353341 29.012 486 292 15 40 500 65 522 9.58e-45 166
Msa0750180 MtrunA17_Chr4g0028411 28.440 545 339 14 14 538 27 540 6.28e-43 160
Msa0750180 MtrunA17_Chr1g0157401 26.453 499 335 12 40 526 68 546 1.54e-41 157
Msa0750180 MtrunA17_Chr6g0471921 29.134 508 315 19 41 534 33 509 2.18e-40 153
Msa0750180 MtrunA17_Chr5g0395431 27.878 556 339 17 9 538 66 585 7.99e-40 152
Msa0750180 MtrunA17_Chr3g0102411 26.079 533 349 16 19 535 33 536 1.15e-38 149
Msa0750180 MtrunA17_Chr4g0000461 28.767 511 329 14 40 538 53 540 2.94e-38 147
Msa0750180 MtrunA17_Chr3g0116251 28.571 406 261 11 152 541 165 557 1.85e-37 145
Msa0750180 MtrunA17_Chr3g0116271 28.610 374 242 8 180 541 199 559 1.18e-36 143
Msa0750180 MtrunA17_Chr1g0197391 26.565 527 332 15 36 542 79 570 8.26e-36 141
Msa0750180 MtrunA17_Chr4g0072561 26.834 518 334 16 27 526 44 534 1.41e-34 137
Msa0750180 MtrunA17_Chr1g0186071 27.976 504 318 12 41 535 84 551 1.20e-33 134
Msa0750180 MtrunA17_Chr4g0039791 27.600 500 317 14 52 534 84 555 2.99e-33 133
Msa0750180 MtrunA17_Chr5g0409791 28.628 503 318 14 52 534 81 562 3.83e-33 133
Msa0750180 MtrunA17_Chr1g0180541 26.629 537 330 15 39 551 55 551 7.74e-33 132
Msa0750180 MtrunA17_Chr5g0409771 29.518 498 306 17 52 533 80 548 2.40e-32 130
Msa0750180 MtrunA17_Chr1g0180551 27.112 509 321 15 41 526 126 607 4.14e-32 130
Msa0750180 MtrunA17_Chr2g0292471 25.185 540 346 17 47 542 35 560 3.02e-28 119
Msa0750180 MtrunA17_Chr2g0334131 32.130 277 174 8 267 538 15 282 2.20e-27 112
Msa0750180 MtrunA17_Chr1g0194371 22.904 489 302 13 41 470 78 550 2.14e-18 89.0
Msa0750180 MtrunA17_Chr4g0034181 22.835 508 291 23 39 474 74 552 3.01e-17 85.1
Msa0750180 MtrunA17_Chr4g0004101 33.974 156 94 4 388 534 170 325 4.52e-17 82.8
Msa0750180 MtrunA17_Chr7g0252691 25.139 541 344 20 37 536 203 723 4.74e-17 84.7
Msa0750180 MtrunA17_Chr7g0270221 25.661 378 213 12 147 470 147 510 9.28e-17 83.6
Msa0750180 MtrunA17_Chr4g0004841 35.000 160 91 5 388 534 175 334 4.83e-15 76.6
Msa0750180 MtrunA17_Chr3g0124631 26.989 352 173 15 182 463 248 585 1.70e-12 70.1
Msa0750180 MtrunA17_Chr1g0157431 24.286 280 196 6 40 311 68 339 8.09e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0750180 AT1G20560.1 68.488 549 169 1 1 545 3 551 0.0 806
Msa0750180 AT2G17650.1 60.971 556 203 2 1 542 48 603 0.0 719
Msa0750180 AT1G20560.2 68.710 473 144 1 77 545 1 473 0.0 694
Msa0750180 AT3G16910.1 51.268 552 255 4 9 546 17 568 0.0 601
Msa0750180 AT1G76290.1 53.407 543 245 4 1 540 1 538 0.0 597
Msa0750180 AT5G16370.1 51.543 551 252 7 1 541 1 546 0.0 570
Msa0750180 AT5G16340.1 50.909 550 255 6 1 540 1 545 0.0 560
Msa0750180 AT1G75960.1 51.184 549 253 6 1 539 1 544 0.0 550
Msa0750180 AT1G66120.1 49.453 548 268 4 1 539 1 548 0.0 548
Msa0750180 AT1G65880.1 48.381 556 270 4 1 539 1 556 0.0 541
Msa0750180 AT1G65890.1 48.468 555 270 4 1 539 1 555 0.0 536
Msa0750180 AT1G77240.1 48.723 548 268 7 1 539 1 544 0.0 535
Msa0750180 AT1G21530.2 47.645 552 272 8 1 539 1 548 0.0 525
Msa0750180 AT1G21530.1 47.645 552 270 9 1 539 1 546 1.54e-180 520
Msa0750180 AT1G21540.1 48.282 553 268 8 1 539 1 549 1.74e-180 520
Msa0750180 AT1G68270.1 44.144 555 264 8 1 539 1 525 3.22e-155 455
Msa0750180 AT4G05160.1 29.487 546 328 15 17 538 30 542 7.86e-50 180
Msa0750180 AT1G20510.1 26.838 544 350 16 7 526 11 530 1.64e-43 163
Msa0750180 AT1G20500.1 27.686 484 311 12 58 529 83 539 3.24e-43 162
Msa0750180 AT5G63380.1 31.436 369 226 11 179 536 202 554 8.86e-41 155
Msa0750180 AT3G21240.1 28.265 513 326 15 39 535 63 549 1.87e-40 154
Msa0750180 AT1G65060.1 26.874 547 346 15 10 535 46 559 6.94e-40 153
Msa0750180 AT1G20480.1 27.812 489 317 13 51 526 86 551 9.66e-40 152
Msa0750180 AT3G48990.1 27.841 528 333 13 19 534 17 508 2.56e-37 145
Msa0750180 AT3G21230.1 28.681 523 327 16 38 541 74 569 5.20e-35 139
Msa0750180 AT4G19010.1 29.810 369 226 10 182 534 205 556 1.27e-33 135
Msa0750180 AT1G20510.2 26.337 486 311 15 7 469 11 472 2.20e-33 133
Msa0750180 AT5G38120.1 27.216 485 315 13 56 529 82 539 3.77e-33 133
Msa0750180 AT3G21230.3 28.629 496 306 16 38 512 74 542 9.77e-31 126
Msa0750180 AT1G62940.1 26.938 516 321 19 41 535 55 535 9.98e-30 123
Msa0750180 AT3G21240.2 27.578 446 282 14 40 470 64 483 4.48e-29 120
Msa0750180 AT3G21240.3 27.578 446 282 14 40 470 64 483 4.48e-29 120
Msa0750180 AT5G38120.3 26.739 460 300 12 56 505 82 514 4.72e-29 121
Msa0750180 AT1G51680.1 26.628 522 328 15 39 535 65 556 1.33e-28 120
Msa0750180 AT1G20510.3 25.983 458 292 15 7 441 11 444 6.94e-27 114
Msa0750180 AT1G51680.3 26.680 491 306 14 39 505 65 525 3.88e-26 112
Msa0750180 AT1G30520.2 23.757 543 368 13 20 529 13 542 9.46e-25 108
Msa0750180 AT1G30520.1 23.757 543 368 13 20 529 13 542 9.46e-25 108
Msa0750180 AT3G21230.2 28.381 451 278 15 38 470 74 497 8.24e-24 105
Msa0750180 AT1G65060.2 25.442 452 284 14 10 441 46 464 8.55e-23 102
Msa0750180 AT3G16170.1 25.700 393 227 12 182 534 235 602 1.52e-22 102
Msa0750180 AT5G38120.4 26.179 424 276 12 56 469 82 478 6.14e-22 99.4
Msa0750180 AT5G38120.2 26.179 424 276 12 56 469 82 478 6.14e-22 99.4
Msa0750180 AT2G47240.1 23.673 490 296 16 41 470 78 549 5.00e-21 97.4
Msa0750180 AT2G47240.2 23.673 490 296 16 41 470 78 549 5.00e-21 97.4
Msa0750180 AT2G47240.3 23.673 490 296 16 41 470 78 549 5.00e-21 97.4
Msa0750180 AT2G47240.4 23.673 490 296 16 41 470 19 490 5.99e-21 97.1
Msa0750180 AT1G51680.2 26.316 456 282 14 39 470 65 490 1.31e-19 92.4
Msa0750180 AT1G20490.2 25.806 372 240 11 58 418 83 429 1.17e-18 89.4
Msa0750180 AT1G20490.1 25.806 372 240 11 58 418 83 429 1.17e-18 89.4
Msa0750180 AT5G36880.6 23.497 549 343 20 37 536 145 665 1.78e-17 86.7
Msa0750180 AT5G36880.3 23.497 549 343 20 37 536 145 665 1.78e-17 86.7
Msa0750180 AT5G36880.5 23.497 549 343 20 37 536 145 665 1.78e-17 86.7
Msa0750180 AT5G36880.1 23.497 549 343 20 37 536 145 665 1.78e-17 86.7
Msa0750180 AT1G49430.1 23.952 501 295 19 40 474 77 557 1.80e-17 86.3
Msa0750180 AT5G36880.2 23.818 550 340 21 37 536 195 715 2.59e-17 85.9
Msa0750180 AT1G64400.1 25.971 489 277 19 41 466 81 547 6.79e-17 84.7
Msa0750180 AT1G30520.3 22.128 470 320 11 20 465 13 460 1.71e-14 76.6
Msa0750180 AT1G30520.4 22.128 470 320 11 20 465 13 460 1.71e-14 76.6
Msa0750180 AT4G11030.1 23.108 502 275 21 41 466 81 547 8.31e-13 71.6

Find 148 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATGACATCCACGCAATA+TGG 0.213485 5_2:+3577003 Msa0750180:five_prime_UTR
TCGAAGGATATTATCATATC+TGG 0.228485 5_2:+3578845 Msa0750180:CDS
TCTCACTCCAATCAGCTTCT+TGG 0.231430 5_2:+3577187 Msa0750180:CDS
TCATACATTGCTGGAATATT+AGG 0.253425 5_2:-3577750 None:intergenic
ATTGGATCCCATTCATCTTT+TGG 0.275746 5_2:-3578065 None:intergenic
CTTTAGCAGTTACATTTCTT+TGG 0.277220 5_2:-3578292 None:intergenic
GAAGTGTAATTCAAAGAAAT+TGG 0.280408 5_2:-3578083 None:intergenic
AATTTACTCGTTAAATTCAT+TGG 0.288054 5_2:-3579342 None:intergenic
AACTACCAATCTTCCACTTT+TGG 0.288627 5_2:+3577941 Msa0750180:CDS
AGTCTATGCCGGTGTATTTA+TGG 0.290959 5_2:+3578195 Msa0750180:CDS
CCATGGGTGAGGTGATGTTT+AGG 0.293811 5_2:+3578693 Msa0750180:CDS
CATTTAAAGGTGGATGGTTT+AGG 0.293868 5_2:+3578768 Msa0750180:CDS
GCAACACAAGAGTCATTTAA+AGG 0.314268 5_2:+3578755 Msa0750180:CDS
AGGTGCTTATCTTAATTCTT+TGG 0.316766 5_2:+3578148 Msa0750180:CDS
CGAGACAGGCTACTCCATTC+TGG 0.326334 5_2:-3578560 None:intergenic
TATGGTTTGACAGAAACTTA+TGG 0.346969 5_2:+3578512 Msa0750180:CDS
TGGGAGACCTGATGAGTATT+GGG 0.357069 5_2:+3578943 Msa0750180:CDS
TACTCGTCATGATTCGTTGA+TGG 0.363124 5_2:+3577821 Msa0750180:CDS
TTTGATTTAGTTCATTCATA+TGG 0.364655 5_2:+3578494 Msa0750180:CDS
GTAATTCATGATCTACAAAA+AGG 0.367573 5_2:-3577878 None:intergenic
GATATCAGAAAGCCACTTCC+GGG 0.373117 5_2:+3578401 Msa0750180:CDS
GCAATGTATGAGCTGCATTT+TGG 0.374424 5_2:+3577762 Msa0750180:CDS
TGATATCAGAAAGCCACTTC+CGG 0.382311 5_2:+3578400 Msa0750180:CDS
AATTAAGATAAGCACCTCTA+TGG 0.382407 5_2:-3578142 None:intergenic
CATGGGTGAGGTGATGTTTA+GGG 0.382589 5_2:+3578694 Msa0750180:CDS
GTCTTGCCGGTTGATGTCTT+TGG 0.393924 5_2:-3579094 None:intergenic
TGGCTATATACTACACCTTT+AGG 0.394178 5_2:-3578122 None:intergenic
CAAAGAAATGTAACTGCTAA+AGG 0.396156 5_2:+3578293 Msa0750180:CDS
AAATACACGATCATATGATA+TGG 0.397569 5_2:+3577029 Msa0750180:five_prime_UTR
ATTTCTTTGAATTACACTTC+AGG 0.409528 5_2:+3578086 Msa0750180:CDS
TGACGGTTACATAGAACTTA+AGG 0.410660 5_2:+3578817 Msa0750180:CDS
ATGGTTTAGGACTGGTGACT+TGG 0.411295 5_2:+3578781 Msa0750180:CDS
TCCAAAATTAAGACCAAAAG+TGG 0.416587 5_2:-3577954 None:intergenic
TGCTTGAAGAAAGCTTCAAT+TGG 0.426710 5_2:+3579294 Msa0750180:three_prime_UTR
CAAAAGATCAAACAGTTAGA+AGG 0.427260 5_2:+3577121 Msa0750180:five_prime_UTR
GGAAGTGGCTTTCTGATATC+AGG 0.427800 5_2:-3578398 None:intergenic
ATTCTCATAGATCAATGTTC+CGG 0.429813 5_2:-3578003 None:intergenic
GTTGTTGAGGCAGCTGTTGT+TGG 0.430997 5_2:+3578923 Msa0750180:CDS
TGAAAAGACCAAAAGATGAA+TGG 0.437562 5_2:+3578057 Msa0750180:CDS
CGAATCATGACGAGTATTCA+AGG 0.441411 5_2:-3577814 None:intergenic
TTCTCATAGATCAATGTTCC+GGG 0.441818 5_2:-3578002 None:intergenic
AAATGCAGCTCATACATTGC+TGG 0.444160 5_2:-3577759 None:intergenic
TCGCCTGCTCCTCTCGAGAC+AGG 0.444470 5_2:-3578574 None:intergenic
CTCAAAATCAAGTTTCCCTT+CGG 0.445425 5_2:-3578033 None:intergenic
GAAGGAGAAGGCAAAGGCTA+TGG 0.446378 5_2:+3579132 Msa0750180:CDS
GAAAAGACCAAAAGATGAAT+GGG 0.450929 5_2:+3578058 Msa0750180:CDS
GAGCGCTCCAAGAAGCTGAT+TGG 0.451334 5_2:-3577194 None:intergenic
TAGCCTGTCTCGAGAGGAGC+AGG 0.452101 5_2:+3578571 Msa0750180:CDS
CCATGTTTCATTGCAATGGA+TGG 0.452299 5_2:+3578225 Msa0750180:CDS
GTCTCTCCCCAATACTCATC+AGG 0.454603 5_2:-3578950 None:intergenic
TAAGACCAAAAGTGGAAGAT+TGG 0.454652 5_2:-3577946 None:intergenic
CGAAGGATATTATCATATCT+GGG 0.456932 5_2:+3578846 Msa0750180:CDS
AAAGAAATGTAACTGCTAAA+GGG 0.463695 5_2:+3578294 Msa0750180:CDS
ATTTGTGTAGGTTGCTGTGT+TGG 0.466354 5_2:+3577725 Msa0750180:intron
TTGTTGAGGCAGCTGTTGTT+GGG 0.470119 5_2:+3578924 Msa0750180:CDS
ACAGCTGCCTCAACAACTGC+TGG 0.470476 5_2:-3578917 None:intergenic
CGTCAAGGAGTACAACATAT+TGG 0.470912 5_2:+3578608 Msa0750180:CDS
GTTCCCATGTTTCATTGCAA+TGG 0.474688 5_2:+3578221 Msa0750180:CDS
ATTAATGAGTTCAGAACTGT+TGG 0.476604 5_2:-3578365 None:intergenic
AGAAACACCGAGTTGAGAAA+TGG 0.477163 5_2:-3577312 None:intergenic
GATCTGCCAAAGACATCAAC+CGG 0.477410 5_2:+3579088 Msa0750180:CDS
TTGACAGAAACTTATGGTCC+TGG 0.482770 5_2:+3578518 Msa0750180:CDS
AAAGGTGGATGGTTTAGGAC+TGG 0.483012 5_2:+3578773 Msa0750180:CDS
CGGTGTTTCTCCTCATGATG+TGG 0.485617 5_2:+3577325 Msa0750180:CDS
TTGGGAGACCTGATGAGTAT+TGG 0.488351 5_2:+3578942 Msa0750180:CDS
TTCCATGTGCAAATTGATCC+AGG 0.491293 5_2:-3578536 None:intergenic
ACATGACATCCACGCAATAT+GGG 0.492433 5_2:+3577004 Msa0750180:five_prime_UTR
CCATCCATTGCAATGAAACA+TGG 0.496766 5_2:-3578225 None:intergenic
GAACGTAGTTAGCGTTGCAT+TGG 0.497591 5_2:-3577163 None:intergenic
TGAATTACTTGATATTGCTA+AGG 0.502727 5_2:+3577893 Msa0750180:CDS
ACTACTACCTTCCCCGGAAG+TGG 0.505110 5_2:-3578413 None:intergenic
TGGTTTAGGACTGGTGACTT+GGG 0.510160 5_2:+3578782 Msa0750180:CDS
AAACATTAGCACCATTGAGT+TGG 0.513653 5_2:+3578874 Msa0750180:CDS
GACTTTGTTATTGTAAACAA+TGG 0.513822 5_2:-3577219 None:intergenic
GCAATGGATGGTGTCTCCCT+TGG 0.517996 5_2:+3578237 Msa0750180:CDS
TGTGATGAATGGATATCTAA+AGG 0.519167 5_2:+3578724 Msa0750180:CDS
AGGCGGTGCTCCACCGCCAC+CGG 0.520554 5_2:+3578442 Msa0750180:CDS
GCTTCTTCCATTTCTCAACT+CGG 0.522221 5_2:+3577305 Msa0750180:CDS
AATAACACCTTCCAACTCAA+TGG 0.523579 5_2:-3578885 None:intergenic
GGAACAACATCAAGTCCTAA+AGG 0.525359 5_2:+3578107 Msa0750180:CDS
TTTGCACATGGAAACCAGAA+TGG 0.525741 5_2:+3578546 Msa0750180:CDS
AGGGGAAACACTGTGATGAA+TGG 0.526822 5_2:+3578713 Msa0750180:CDS
CATAGAACAGCCCCTGACAT+TGG 0.528095 5_2:-3577789 None:intergenic
CTTTAGAAATGTATTACAGT+CGG 0.538466 5_2:-3579183 None:intergenic
GGTGACATCGTTGTAGATGA+TGG 0.538839 5_2:-3577243 None:intergenic
GCTCATCCATCAGTCTCTCC+CGG 0.539601 5_2:+3577984 Msa0750180:CDS
CAGAAAGCCACTTCCGGGGA+AGG 0.540398 5_2:+3578406 Msa0750180:CDS
GTCATCACTACTACCTTCCC+CGG 0.545022 5_2:-3578419 None:intergenic
AAGAGTCATTTAAAGGTGGA+TGG 0.546163 5_2:+3578762 Msa0750180:CDS
GAATTACTTGATATTGCTAA+GGG 0.549278 5_2:+3577894 Msa0750180:CDS
AATGTTCCGGGAGAGACTGA+TGG 0.553323 5_2:-3577990 None:intergenic
TATGAGAATCTTATATCCGA+AGG 0.561953 5_2:+3578017 Msa0750180:CDS
GGTACACTCTTCATTGTGAC+AGG 0.562785 5_2:-3578656 None:intergenic
TTGTGCGTTTGTGAAGTTGA+AGG 0.563096 5_2:+3578976 Msa0750180:CDS
AAGGAGAAGGCAAAGGCTAT+GGG 0.567730 5_2:+3579133 Msa0750180:CDS
CCTTGGAGTATTGCTGCTCA+AGG 0.568786 5_2:+3578254 Msa0750180:CDS
AGTTAGAAGGTGACGATGGA+AGG 0.571786 5_2:+3577134 Msa0750180:exon
CAATGAGATGAAGTCTATGC+CGG 0.575034 5_2:+3578184 Msa0750180:CDS
CCTAAACATCACCTCACCCA+TGG 0.581531 5_2:-3578693 None:intergenic
GAAGGGAGGGCACAATGCTA+CGG 0.582366 5_2:+3578994 Msa0750180:CDS
TTTGTTATTGTAAACAATGG+CGG 0.586498 5_2:-3577216 None:intergenic
GGGAAGGTAGTAGTGATGAC+AGG 0.592219 5_2:+3578422 Msa0750180:CDS
AGGAGTACAACATATTGGAC+TGG 0.595988 5_2:+3578613 Msa0750180:CDS
TGTGCGTTTGTGAAGTTGAA+GGG 0.597382 5_2:+3578977 Msa0750180:CDS
AAGAAGCTGATTGGAGTGAG+AGG 0.599442 5_2:-3577185 None:intergenic
GTACAACATATTGGACTGGA+AGG 0.601901 5_2:+3578617 Msa0750180:CDS
TAGTCATCCAGCAGTTGTTG+AGG 0.610515 5_2:+3578910 Msa0750180:CDS
AAGCACAAAGTAACACACAC+GGG 0.611637 5_2:+3578335 Msa0750180:CDS
ATTAGCACCATTGAGTTGGA+AGG 0.615739 5_2:+3578878 Msa0750180:CDS
CATCCATTGCAATGAAACAT+GGG 0.616932 5_2:-3578224 None:intergenic
AAGGAACAAACCACATCATG+AGG 0.618013 5_2:-3577335 None:intergenic
ATGGAGTAGCCTGTCTCGAG+AGG 0.618262 5_2:+3578565 Msa0750180:CDS
CCTTGAGCAGCAATACTCCA+AGG 0.618919 5_2:-3578254 None:intergenic
CATATTGCGTGGATGTCATG+TGG 0.624433 5_2:-3577002 None:intergenic
TTCAACTTCACAAACGCACA+AGG 0.624923 5_2:-3578974 None:intergenic
TGGAGTATTGCTGCTCAAGG+TGG 0.625763 5_2:+3578257 Msa0750180:CDS
GAAGGATATTATCATATCTG+GGG 0.626950 5_2:+3578847 Msa0750180:CDS
ATGAGAATCTTATATCCGAA+GGG 0.627897 5_2:+3578018 Msa0750180:CDS
ATGGGTGAGGTGATGTTTAG+GGG 0.630548 5_2:+3578695 Msa0750180:CDS
TGTCACAATGAAGAGTGTAC+CGG 0.633282 5_2:+3578658 Msa0750180:CDS
AGAACTTAAGGATCGGTCGA+AGG 0.636389 5_2:+3578829 Msa0750180:CDS
CGTTTGTGAAGTTGAAGGGA+GGG 0.637801 5_2:+3578981 Msa0750180:CDS
TTGGGAGTAAAGCATTCTGA+CGG 0.644221 5_2:+3578800 Msa0750180:CDS
CCGGCTGATGCGAAAACCAT+GGG 0.646339 5_2:+3578677 Msa0750180:CDS
CATGACATCCACGCAATATG+GGG 0.651219 5_2:+3577005 Msa0750180:five_prime_UTR
ACACAAGAGTCATTTAAAGG+TGG 0.651781 5_2:+3578758 Msa0750180:CDS
GGAACACACCATAAATACAC+CGG 0.652672 5_2:-3578203 None:intergenic
GTCCTGGATCAATTTGCACA+TGG 0.656520 5_2:+3578534 Msa0750180:CDS
TAAGCACAAAGTAACACACA+CGG 0.660502 5_2:+3578334 Msa0750180:CDS
CTTGAGCAGCAATACTCCAA+GGG 0.661249 5_2:-3578253 None:intergenic
AGTGGCTTTCTGATATCAGG+TGG 0.661622 5_2:-3578395 None:intergenic
GGTGTAGTATATAGCCATAG+AGG 0.662140 5_2:+3578128 Msa0750180:CDS
TGATGCGAAAACCATGGGTG+AGG 0.664777 5_2:+3578682 Msa0750180:CDS
TGTATTTGCCCCATATTGCG+TGG 0.666029 5_2:-3577013 None:intergenic
AAACAGTTAGAAGGTGACGA+TGG 0.667491 5_2:+3577130 Msa0750180:exon
GTTACATAGAACTTAAGGAT+CGG 0.668885 5_2:+3578822 Msa0750180:CDS
AAGGATATTATCATATCTGG+GGG 0.669368 5_2:+3578848 Msa0750180:CDS
ATATCAGAAAGCCACTTCCG+GGG 0.673117 5_2:+3578402 Msa0750180:CDS
TTGTCTGAAAAGAAACACGA+AGG 0.674925 5_2:-3577101 None:intergenic
ACCGGCTGATGCGAAAACCA+TGG 0.679532 5_2:+3578676 Msa0750180:CDS
GCGTTTGTGAAGTTGAAGGG+AGG 0.681440 5_2:+3578980 Msa0750180:CDS
ACAACGATGTCACCTACACA+TGG 0.682235 5_2:+3577252 Msa0750180:CDS
AGCACAAAGTAACACACACG+GGG 0.696294 5_2:+3578336 Msa0750180:CDS
GGGAGACCTGATGAGTATTG+GGG 0.710890 5_2:+3578944 Msa0750180:CDS
AAGGTAGTAGTGATGACAGG+CGG 0.720822 5_2:+3578425 Msa0750180:CDS
ATGAGTCTGAGACCATGTGT+AGG 0.729803 5_2:-3577264 None:intergenic
CACAAAGTAACACACACGGG+GGG 0.730025 5_2:+3578338 Msa0750180:CDS
GCACAAAGTAACACACACGG+GGG 0.764468 5_2:+3578337 Msa0750180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTCTGTTAATTT+TGG + chr5_2:3577435-3577454 Msa0750180:intron 10.0%
!!! TTTTTTTTTTCTGTTAATTT+TGG + chr5_2:3577435-3577454 Msa0750180:intron 10.0%
!!! AATTTGAATTTGTTTGAAAA+AGG - chr5_2:3577357-3577376 None:intergenic 15.0%
!!! AATTTGAATTTGTTTGAAAA+AGG - chr5_2:3577357-3577376 None:intergenic 15.0%
!!! TTTGATTTAGTTCATTCATA+TGG + chr5_2:3578494-3578513 Msa0750180:CDS 20.0%
!! AATTTACTCGTTAAATTCAT+TGG - chr5_2:3579345-3579364 None:intergenic 20.0%
!!! TTTGATTTAGTTCATTCATA+TGG + chr5_2:3578494-3578513 Msa0750180:CDS 20.0%
!! AATTTACTCGTTAAATTCAT+TGG - chr5_2:3579345-3579364 None:intergenic 20.0%
! AAATACACGATCATATGATA+TGG + chr5_2:3577029-3577048 Msa0750180:five_prime_UTR 25.0%
!!! TTTGTTATTGTAAACAATGG+CGG - chr5_2:3577219-3577238 None:intergenic 25.0%
!!! GACTTTGTTATTGTAAACAA+TGG - chr5_2:3577222-3577241 None:intergenic 25.0%
! TCGCTAGATTATAGATTTAA+AGG - chr5_2:3577397-3577416 None:intergenic 25.0%
!!! TAATCTAGCGATTTTTCAAT+TGG + chr5_2:3577406-3577425 Msa0750180:intron 25.0%
!!! TTAATTTTGGTTTTGATCGA+AGG + chr5_2:3577448-3577467 Msa0750180:intron 25.0%
!! AAACTACTTAGAATTTTGCA+TGG + chr5_2:3577599-3577618 Msa0750180:intron 25.0%
! GAAGAAATATGATTACAAGT+TGG + chr5_2:3577655-3577674 Msa0750180:intron 25.0%
! GTAATTCATGATCTACAAAA+AGG - chr5_2:3577881-3577900 None:intergenic 25.0%
! TGAATTACTTGATATTGCTA+AGG + chr5_2:3577893-3577912 Msa0750180:CDS 25.0%
! GAATTACTTGATATTGCTAA+GGG + chr5_2:3577894-3577913 Msa0750180:CDS 25.0%
! GAAGTGTAATTCAAAGAAAT+TGG - chr5_2:3578086-3578105 None:intergenic 25.0%
! ATTTCTTTGAATTACACTTC+AGG + chr5_2:3578086-3578105 Msa0750180:CDS 25.0%
! AAAGAAATGTAACTGCTAAA+GGG + chr5_2:3578294-3578313 Msa0750180:CDS 25.0%
!!! GACACAAAAATATGTTTTGA+AGG + chr5_2:3579114-3579133 Msa0750180:CDS 25.0%
!!! AAAATATGTTTTGAAGGAGA+AGG + chr5_2:3579120-3579139 Msa0750180:CDS 25.0%
!! CTTTAGAAATGTATTACAGT+CGG - chr5_2:3579186-3579205 None:intergenic 25.0%
! AAATACACGATCATATGATA+TGG + chr5_2:3577029-3577048 Msa0750180:five_prime_UTR 25.0%
!!! TTTGTTATTGTAAACAATGG+CGG - chr5_2:3577219-3577238 None:intergenic 25.0%
!!! GACTTTGTTATTGTAAACAA+TGG - chr5_2:3577222-3577241 None:intergenic 25.0%
! TCGCTAGATTATAGATTTAA+AGG - chr5_2:3577397-3577416 None:intergenic 25.0%
!!! TAATCTAGCGATTTTTCAAT+TGG + chr5_2:3577406-3577425 Msa0750180:intron 25.0%
!!! TTAATTTTGGTTTTGATCGA+AGG + chr5_2:3577448-3577467 Msa0750180:intron 25.0%
!! AAACTACTTAGAATTTTGCA+TGG + chr5_2:3577599-3577618 Msa0750180:intron 25.0%
! GAAGAAATATGATTACAAGT+TGG + chr5_2:3577655-3577674 Msa0750180:intron 25.0%
! GTAATTCATGATCTACAAAA+AGG - chr5_2:3577881-3577900 None:intergenic 25.0%
! TGAATTACTTGATATTGCTA+AGG + chr5_2:3577893-3577912 Msa0750180:CDS 25.0%
! GAATTACTTGATATTGCTAA+GGG + chr5_2:3577894-3577913 Msa0750180:CDS 25.0%
! GAAGTGTAATTCAAAGAAAT+TGG - chr5_2:3578086-3578105 None:intergenic 25.0%
! ATTTCTTTGAATTACACTTC+AGG + chr5_2:3578086-3578105 Msa0750180:CDS 25.0%
! AAAGAAATGTAACTGCTAAA+GGG + chr5_2:3578294-3578313 Msa0750180:CDS 25.0%
!!! GACACAAAAATATGTTTTGA+AGG + chr5_2:3579114-3579133 Msa0750180:CDS 25.0%
!!! AAAATATGTTTTGAAGGAGA+AGG + chr5_2:3579120-3579139 Msa0750180:CDS 25.0%
!! CTTTAGAAATGTATTACAGT+CGG - chr5_2:3579186-3579205 None:intergenic 25.0%
CAAAAGATCAAACAGTTAGA+AGG + chr5_2:3577121-3577140 Msa0750180:five_prime_UTR 30.0%
GATATTATAAAGCACAGACT+CGG - chr5_2:3577575-3577594 None:intergenic 30.0%
GAATTTGCACTTATTTGTGT+AGG + chr5_2:3577713-3577732 Msa0750180:intron 30.0%
TCATACATTGCTGGAATATT+AGG - chr5_2:3577753-3577772 None:intergenic 30.0%
!!! TCCACTTTTGGTCTTAATTT+TGG + chr5_2:3577953-3577972 Msa0750180:CDS 30.0%
TCCAAAATTAAGACCAAAAG+TGG - chr5_2:3577957-3577976 None:intergenic 30.0%
!!! ACTTTTGGTCTTAATTTTGG+AGG + chr5_2:3577956-3577975 Msa0750180:CDS 30.0%
!!! CTTTTGGTCTTAATTTTGGA+GGG + chr5_2:3577957-3577976 Msa0750180:CDS 30.0%
ATTCTCATAGATCAATGTTC+CGG - chr5_2:3578006-3578025 None:intergenic 30.0%
TATGAGAATCTTATATCCGA+AGG + chr5_2:3578017-3578036 Msa0750180:CDS 30.0%
ATGAGAATCTTATATCCGAA+GGG + chr5_2:3578018-3578037 Msa0750180:CDS 30.0%
TGAAAAGACCAAAAGATGAA+TGG + chr5_2:3578057-3578076 Msa0750180:CDS 30.0%
GAAAAGACCAAAAGATGAAT+GGG + chr5_2:3578058-3578077 Msa0750180:CDS 30.0%
AATTAAGATAAGCACCTCTA+TGG - chr5_2:3578145-3578164 None:intergenic 30.0%
AGGTGCTTATCTTAATTCTT+TGG + chr5_2:3578148-3578167 Msa0750180:CDS 30.0%
CTTTAGCAGTTACATTTCTT+TGG - chr5_2:3578295-3578314 None:intergenic 30.0%
CAAAGAAATGTAACTGCTAA+AGG + chr5_2:3578293-3578312 Msa0750180:CDS 30.0%
ATTAATGAGTTCAGAACTGT+TGG - chr5_2:3578368-3578387 None:intergenic 30.0%
!!! ATTTTTTAGGATGGAAGAAC+TGG + chr5_2:3578469-3578488 Msa0750180:CDS 30.0%
!!! TTTTTTAGGATGGAAGAACT+GGG + chr5_2:3578470-3578489 Msa0750180:CDS 30.0%
TATGGTTTGACAGAAACTTA+TGG + chr5_2:3578512-3578531 Msa0750180:CDS 30.0%
TGTGATGAATGGATATCTAA+AGG + chr5_2:3578724-3578743 Msa0750180:CDS 30.0%
GTTACATAGAACTTAAGGAT+CGG + chr5_2:3578822-3578841 Msa0750180:CDS 30.0%
TCGAAGGATATTATCATATC+TGG + chr5_2:3578845-3578864 Msa0750180:CDS 30.0%
CGAAGGATATTATCATATCT+GGG + chr5_2:3578846-3578865 Msa0750180:CDS 30.0%
GAAGGATATTATCATATCTG+GGG + chr5_2:3578847-3578866 Msa0750180:CDS 30.0%
AAGGATATTATCATATCTGG+GGG + chr5_2:3578848-3578867 Msa0750180:CDS 30.0%
!! AACATATTTTTGTGTCTTGC+CGG - chr5_2:3579110-3579129 None:intergenic 30.0%
!! TAGTCCTTTTCTTTTTAGCA+GGG - chr5_2:3579395-3579414 None:intergenic 30.0%
CAAAAGATCAAACAGTTAGA+AGG + chr5_2:3577121-3577140 Msa0750180:five_prime_UTR 30.0%
GATATTATAAAGCACAGACT+CGG - chr5_2:3577575-3577594 None:intergenic 30.0%
GAATTTGCACTTATTTGTGT+AGG + chr5_2:3577713-3577732 Msa0750180:intron 30.0%
TCATACATTGCTGGAATATT+AGG - chr5_2:3577753-3577772 None:intergenic 30.0%
!!! TCCACTTTTGGTCTTAATTT+TGG + chr5_2:3577953-3577972 Msa0750180:CDS 30.0%
TCCAAAATTAAGACCAAAAG+TGG - chr5_2:3577957-3577976 None:intergenic 30.0%
!!! ACTTTTGGTCTTAATTTTGG+AGG + chr5_2:3577956-3577975 Msa0750180:CDS 30.0%
!!! CTTTTGGTCTTAATTTTGGA+GGG + chr5_2:3577957-3577976 Msa0750180:CDS 30.0%
ATTCTCATAGATCAATGTTC+CGG - chr5_2:3578006-3578025 None:intergenic 30.0%
TATGAGAATCTTATATCCGA+AGG + chr5_2:3578017-3578036 Msa0750180:CDS 30.0%
ATGAGAATCTTATATCCGAA+GGG + chr5_2:3578018-3578037 Msa0750180:CDS 30.0%
TGAAAAGACCAAAAGATGAA+TGG + chr5_2:3578057-3578076 Msa0750180:CDS 30.0%
GAAAAGACCAAAAGATGAAT+GGG + chr5_2:3578058-3578077 Msa0750180:CDS 30.0%
AATTAAGATAAGCACCTCTA+TGG - chr5_2:3578145-3578164 None:intergenic 30.0%
AGGTGCTTATCTTAATTCTT+TGG + chr5_2:3578148-3578167 Msa0750180:CDS 30.0%
CTTTAGCAGTTACATTTCTT+TGG - chr5_2:3578295-3578314 None:intergenic 30.0%
CAAAGAAATGTAACTGCTAA+AGG + chr5_2:3578293-3578312 Msa0750180:CDS 30.0%
ATTAATGAGTTCAGAACTGT+TGG - chr5_2:3578368-3578387 None:intergenic 30.0%
!!! ATTTTTTAGGATGGAAGAAC+TGG + chr5_2:3578469-3578488 Msa0750180:CDS 30.0%
!!! TTTTTTAGGATGGAAGAACT+GGG + chr5_2:3578470-3578489 Msa0750180:CDS 30.0%
TATGGTTTGACAGAAACTTA+TGG + chr5_2:3578512-3578531 Msa0750180:CDS 30.0%
TGTGATGAATGGATATCTAA+AGG + chr5_2:3578724-3578743 Msa0750180:CDS 30.0%
GTTACATAGAACTTAAGGAT+CGG + chr5_2:3578822-3578841 Msa0750180:CDS 30.0%
TCGAAGGATATTATCATATC+TGG + chr5_2:3578845-3578864 Msa0750180:CDS 30.0%
CGAAGGATATTATCATATCT+GGG + chr5_2:3578846-3578865 Msa0750180:CDS 30.0%
GAAGGATATTATCATATCTG+GGG + chr5_2:3578847-3578866 Msa0750180:CDS 30.0%
AAGGATATTATCATATCTGG+GGG + chr5_2:3578848-3578867 Msa0750180:CDS 30.0%
!! AACATATTTTTGTGTCTTGC+CGG - chr5_2:3579110-3579129 None:intergenic 30.0%
!! TAGTCCTTTTCTTTTTAGCA+GGG - chr5_2:3579395-3579414 None:intergenic 30.0%
TTGTCTGAAAAGAAACACGA+AGG - chr5_2:3577104-3577123 None:intergenic 35.0%
TCACATATTCACATGTGTCT+AGG - chr5_2:3577505-3577524 None:intergenic 35.0%
!!! ATTTTGGTGTTCCAATGTCA+GGG + chr5_2:3577778-3577797 Msa0750180:CDS 35.0%
! TACAAAAAGGATTTTCGCGT+CGG - chr5_2:3577868-3577887 None:intergenic 35.0%
! AACTACCAATCTTCCACTTT+TGG + chr5_2:3577941-3577960 Msa0750180:CDS 35.0%
TAAGACCAAAAGTGGAAGAT+TGG - chr5_2:3577949-3577968 None:intergenic 35.0%
TTCTCATAGATCAATGTTCC+GGG - chr5_2:3578005-3578024 None:intergenic 35.0%
CTCAAAATCAAGTTTCCCTT+CGG - chr5_2:3578036-3578055 None:intergenic 35.0%
! ATTGGATCCCATTCATCTTT+TGG - chr5_2:3578068-3578087 None:intergenic 35.0%
TGGCTATATACTACACCTTT+AGG - chr5_2:3578125-3578144 None:intergenic 35.0%
CATCCATTGCAATGAAACAT+GGG - chr5_2:3578227-3578246 None:intergenic 35.0%
TAAGCACAAAGTAACACACA+CGG + chr5_2:3578334-3578353 Msa0750180:CDS 35.0%
TCCATCCTAAAAAATACGTC+CGG - chr5_2:3578464-3578483 None:intergenic 35.0%
GCAACACAAGAGTCATTTAA+AGG + chr5_2:3578755-3578774 Msa0750180:CDS 35.0%
ACACAAGAGTCATTTAAAGG+TGG + chr5_2:3578758-3578777 Msa0750180:CDS 35.0%
AAGAGTCATTTAAAGGTGGA+TGG + chr5_2:3578762-3578781 Msa0750180:CDS 35.0%
CATTTAAAGGTGGATGGTTT+AGG + chr5_2:3578768-3578787 Msa0750180:CDS 35.0%
TGACGGTTACATAGAACTTA+AGG + chr5_2:3578817-3578836 Msa0750180:CDS 35.0%
AAACATTAGCACCATTGAGT+TGG + chr5_2:3578874-3578893 Msa0750180:CDS 35.0%
AATAACACCTTCCAACTCAA+TGG - chr5_2:3578888-3578907 None:intergenic 35.0%
TGCTTGAAGAAAGCTTCAAT+TGG + chr5_2:3579294-3579313 Msa0750180:three_prime_UTR 35.0%
ATAGCCCTGCTAAAAAGAAA+AGG + chr5_2:3579388-3579407 Msa0750180:three_prime_UTR 35.0%
!! CTAGTCCTTTTCTTTTTAGC+AGG - chr5_2:3579396-3579415 None:intergenic 35.0%
GACTGCTAAATTGATCTTTC+CGG + chr5_2:3579415-3579434 Msa0750180:three_prime_UTR 35.0%
TTGTCTGAAAAGAAACACGA+AGG - chr5_2:3577104-3577123 None:intergenic 35.0%
TCACATATTCACATGTGTCT+AGG - chr5_2:3577505-3577524 None:intergenic 35.0%
!!! ATTTTGGTGTTCCAATGTCA+GGG + chr5_2:3577778-3577797 Msa0750180:CDS 35.0%
! TACAAAAAGGATTTTCGCGT+CGG - chr5_2:3577868-3577887 None:intergenic 35.0%
! AACTACCAATCTTCCACTTT+TGG + chr5_2:3577941-3577960 Msa0750180:CDS 35.0%
TAAGACCAAAAGTGGAAGAT+TGG - chr5_2:3577949-3577968 None:intergenic 35.0%
TTCTCATAGATCAATGTTCC+GGG - chr5_2:3578005-3578024 None:intergenic 35.0%
CTCAAAATCAAGTTTCCCTT+CGG - chr5_2:3578036-3578055 None:intergenic 35.0%
! ATTGGATCCCATTCATCTTT+TGG - chr5_2:3578068-3578087 None:intergenic 35.0%
TGGCTATATACTACACCTTT+AGG - chr5_2:3578125-3578144 None:intergenic 35.0%
CATCCATTGCAATGAAACAT+GGG - chr5_2:3578227-3578246 None:intergenic 35.0%
TAAGCACAAAGTAACACACA+CGG + chr5_2:3578334-3578353 Msa0750180:CDS 35.0%
TCCATCCTAAAAAATACGTC+CGG - chr5_2:3578464-3578483 None:intergenic 35.0%
GCAACACAAGAGTCATTTAA+AGG + chr5_2:3578755-3578774 Msa0750180:CDS 35.0%
ACACAAGAGTCATTTAAAGG+TGG + chr5_2:3578758-3578777 Msa0750180:CDS 35.0%
AAGAGTCATTTAAAGGTGGA+TGG + chr5_2:3578762-3578781 Msa0750180:CDS 35.0%
CATTTAAAGGTGGATGGTTT+AGG + chr5_2:3578768-3578787 Msa0750180:CDS 35.0%
TGACGGTTACATAGAACTTA+AGG + chr5_2:3578817-3578836 Msa0750180:CDS 35.0%
AAACATTAGCACCATTGAGT+TGG + chr5_2:3578874-3578893 Msa0750180:CDS 35.0%
AATAACACCTTCCAACTCAA+TGG - chr5_2:3578888-3578907 None:intergenic 35.0%
TGCTTGAAGAAAGCTTCAAT+TGG + chr5_2:3579294-3579313 Msa0750180:three_prime_UTR 35.0%
ATAGCCCTGCTAAAAAGAAA+AGG + chr5_2:3579388-3579407 Msa0750180:three_prime_UTR 35.0%
!! CTAGTCCTTTTCTTTTTAGC+AGG - chr5_2:3579396-3579415 None:intergenic 35.0%
ACATGACATCCACGCAATAT+GGG + chr5_2:3577004-3577023 Msa0750180:five_prime_UTR 40.0%
AAACAGTTAGAAGGTGACGA+TGG + chr5_2:3577130-3577149 Msa0750180:exon 40.0%
GCTTCTTCCATTTCTCAACT+CGG + chr5_2:3577305-3577324 Msa0750180:CDS 40.0%
! AGAAACACCGAGTTGAGAAA+TGG - chr5_2:3577315-3577334 None:intergenic 40.0%
AAGGAACAAACCACATCATG+AGG - chr5_2:3577338-3577357 None:intergenic 40.0%
ATTTGTGTAGGTTGCTGTGT+TGG + chr5_2:3577725-3577744 Msa0750180:intron 40.0%
AAATGCAGCTCATACATTGC+TGG - chr5_2:3577762-3577781 None:intergenic 40.0%
! GCAATGTATGAGCTGCATTT+TGG + chr5_2:3577762-3577781 Msa0750180:CDS 40.0%
!!! CATTTTGGTGTTCCAATGTC+AGG + chr5_2:3577777-3577796 Msa0750180:CDS 40.0%
!!! TTTTGGTGTTCCAATGTCAG+GGG + chr5_2:3577779-3577798 Msa0750180:CDS 40.0%
CGAATCATGACGAGTATTCA+AGG - chr5_2:3577817-3577836 None:intergenic 40.0%
TACTCGTCATGATTCGTTGA+TGG + chr5_2:3577821-3577840 Msa0750180:CDS 40.0%
! CGAAGGGAAACTTGATTTTG+AGG + chr5_2:3578034-3578053 Msa0750180:CDS 40.0%
GGAACAACATCAAGTCCTAA+AGG + chr5_2:3578107-3578126 Msa0750180:CDS 40.0%
GGTGTAGTATATAGCCATAG+AGG + chr5_2:3578128-3578147 Msa0750180:CDS 40.0%
CAATGAGATGAAGTCTATGC+CGG + chr5_2:3578184-3578203 Msa0750180:CDS 40.0%
AGTCTATGCCGGTGTATTTA+TGG + chr5_2:3578195-3578214 Msa0750180:CDS 40.0%
GGAACACACCATAAATACAC+CGG - chr5_2:3578206-3578225 None:intergenic 40.0%
GTTCCCATGTTTCATTGCAA+TGG + chr5_2:3578221-3578240 Msa0750180:CDS 40.0%
CCATCCATTGCAATGAAACA+TGG - chr5_2:3578228-3578247 None:intergenic 40.0%
CCATGTTTCATTGCAATGGA+TGG + chr5_2:3578225-3578244 Msa0750180:CDS 40.0%
AAGCACAAAGTAACACACAC+GGG + chr5_2:3578335-3578354 Msa0750180:CDS 40.0%
TGATATCAGAAAGCCACTTC+CGG + chr5_2:3578400-3578419 Msa0750180:CDS 40.0%
ATCCTAAAAAATACGTCCGG+TGG - chr5_2:3578461-3578480 None:intergenic 40.0%
!!! ACCGGACGTATTTTTTAGGA+TGG + chr5_2:3578460-3578479 Msa0750180:CDS 40.0%
TTGACAGAAACTTATGGTCC+TGG + chr5_2:3578518-3578537 Msa0750180:CDS 40.0%
TTCCATGTGCAAATTGATCC+AGG - chr5_2:3578539-3578558 None:intergenic 40.0%
TTTGCACATGGAAACCAGAA+TGG + chr5_2:3578546-3578565 Msa0750180:CDS 40.0%
! CGTCAAGGAGTACAACATAT+TGG + chr5_2:3578608-3578627 Msa0750180:CDS 40.0%
! AGGAGTACAACATATTGGAC+TGG + chr5_2:3578613-3578632 Msa0750180:CDS 40.0%
! GTACAACATATTGGACTGGA+AGG + chr5_2:3578617-3578636 Msa0750180:CDS 40.0%
! TGTCACAATGAAGAGTGTAC+CGG + chr5_2:3578658-3578677 Msa0750180:CDS 40.0%
! TTGGGAGTAAAGCATTCTGA+CGG + chr5_2:3578800-3578819 Msa0750180:CDS 40.0%
!! ATTAGCACCATTGAGTTGGA+AGG + chr5_2:3578878-3578897 Msa0750180:CDS 40.0%
TTCAACTTCACAAACGCACA+AGG - chr5_2:3578977-3578996 None:intergenic 40.0%
TTGTGCGTTTGTGAAGTTGA+AGG + chr5_2:3578976-3578995 Msa0750180:CDS 40.0%
TGTGCGTTTGTGAAGTTGAA+GGG + chr5_2:3578977-3578996 Msa0750180:CDS 40.0%
!! AAAGCGTTTGCCTCGTTTTA+TGG + chr5_2:3579042-3579061 Msa0750180:CDS 40.0%
!!! GTTTTTGGAGCCATAAAACG+AGG - chr5_2:3579055-3579074 None:intergenic 40.0%
! TCAGCAAACACGACAGTTTT+TGG - chr5_2:3579070-3579089 None:intergenic 40.0%
!!! TGTTTTGAAGGAGAAGGCAA+AGG + chr5_2:3579126-3579145 Msa0750180:CDS 40.0%
ACATGACATCCACGCAATAT+GGG + chr5_2:3577004-3577023 Msa0750180:five_prime_UTR 40.0%
AAACAGTTAGAAGGTGACGA+TGG + chr5_2:3577130-3577149 Msa0750180:exon 40.0%
GCTTCTTCCATTTCTCAACT+CGG + chr5_2:3577305-3577324 Msa0750180:CDS 40.0%
! AGAAACACCGAGTTGAGAAA+TGG - chr5_2:3577315-3577334 None:intergenic 40.0%
AAGGAACAAACCACATCATG+AGG - chr5_2:3577338-3577357 None:intergenic 40.0%
ATTTGTGTAGGTTGCTGTGT+TGG + chr5_2:3577725-3577744 Msa0750180:intron 40.0%
AAATGCAGCTCATACATTGC+TGG - chr5_2:3577762-3577781 None:intergenic 40.0%
! GCAATGTATGAGCTGCATTT+TGG + chr5_2:3577762-3577781 Msa0750180:CDS 40.0%
!!! CATTTTGGTGTTCCAATGTC+AGG + chr5_2:3577777-3577796 Msa0750180:CDS 40.0%
!!! TTTTGGTGTTCCAATGTCAG+GGG + chr5_2:3577779-3577798 Msa0750180:CDS 40.0%
CGAATCATGACGAGTATTCA+AGG - chr5_2:3577817-3577836 None:intergenic 40.0%
TACTCGTCATGATTCGTTGA+TGG + chr5_2:3577821-3577840 Msa0750180:CDS 40.0%
! CGAAGGGAAACTTGATTTTG+AGG + chr5_2:3578034-3578053 Msa0750180:CDS 40.0%
GGAACAACATCAAGTCCTAA+AGG + chr5_2:3578107-3578126 Msa0750180:CDS 40.0%
GGTGTAGTATATAGCCATAG+AGG + chr5_2:3578128-3578147 Msa0750180:CDS 40.0%
CAATGAGATGAAGTCTATGC+CGG + chr5_2:3578184-3578203 Msa0750180:CDS 40.0%
AGTCTATGCCGGTGTATTTA+TGG + chr5_2:3578195-3578214 Msa0750180:CDS 40.0%
GGAACACACCATAAATACAC+CGG - chr5_2:3578206-3578225 None:intergenic 40.0%
GTTCCCATGTTTCATTGCAA+TGG + chr5_2:3578221-3578240 Msa0750180:CDS 40.0%
CCATCCATTGCAATGAAACA+TGG - chr5_2:3578228-3578247 None:intergenic 40.0%
CCATGTTTCATTGCAATGGA+TGG + chr5_2:3578225-3578244 Msa0750180:CDS 40.0%
AAGCACAAAGTAACACACAC+GGG + chr5_2:3578335-3578354 Msa0750180:CDS 40.0%
TGATATCAGAAAGCCACTTC+CGG + chr5_2:3578400-3578419 Msa0750180:CDS 40.0%
ATCCTAAAAAATACGTCCGG+TGG - chr5_2:3578461-3578480 None:intergenic 40.0%
!!! ACCGGACGTATTTTTTAGGA+TGG + chr5_2:3578460-3578479 Msa0750180:CDS 40.0%
TTGACAGAAACTTATGGTCC+TGG + chr5_2:3578518-3578537 Msa0750180:CDS 40.0%
TTCCATGTGCAAATTGATCC+AGG - chr5_2:3578539-3578558 None:intergenic 40.0%
TTTGCACATGGAAACCAGAA+TGG + chr5_2:3578546-3578565 Msa0750180:CDS 40.0%
! CGTCAAGGAGTACAACATAT+TGG + chr5_2:3578608-3578627 Msa0750180:CDS 40.0%
! AGGAGTACAACATATTGGAC+TGG + chr5_2:3578613-3578632 Msa0750180:CDS 40.0%
! GTACAACATATTGGACTGGA+AGG + chr5_2:3578617-3578636 Msa0750180:CDS 40.0%
! TGTCACAATGAAGAGTGTAC+CGG + chr5_2:3578658-3578677 Msa0750180:CDS 40.0%
! TTGGGAGTAAAGCATTCTGA+CGG + chr5_2:3578800-3578819 Msa0750180:CDS 40.0%
!! ATTAGCACCATTGAGTTGGA+AGG + chr5_2:3578878-3578897 Msa0750180:CDS 40.0%
TTCAACTTCACAAACGCACA+AGG - chr5_2:3578977-3578996 None:intergenic 40.0%
TTGTGCGTTTGTGAAGTTGA+AGG + chr5_2:3578976-3578995 Msa0750180:CDS 40.0%
TGTGCGTTTGTGAAGTTGAA+GGG + chr5_2:3578977-3578996 Msa0750180:CDS 40.0%
!! AAAGCGTTTGCCTCGTTTTA+TGG + chr5_2:3579042-3579061 Msa0750180:CDS 40.0%
!!! GTTTTTGGAGCCATAAAACG+AGG - chr5_2:3579055-3579074 None:intergenic 40.0%
! TCAGCAAACACGACAGTTTT+TGG - chr5_2:3579070-3579089 None:intergenic 40.0%
!!! TGTTTTGAAGGAGAAGGCAA+AGG + chr5_2:3579126-3579145 Msa0750180:CDS 40.0%
CATATTGCGTGGATGTCATG+TGG - chr5_2:3577005-3577024 None:intergenic 45.0%
CACATGACATCCACGCAATA+TGG + chr5_2:3577003-3577022 Msa0750180:five_prime_UTR 45.0%
CATGACATCCACGCAATATG+GGG + chr5_2:3577005-3577024 Msa0750180:five_prime_UTR 45.0%
TGTATTTGCCCCATATTGCG+TGG - chr5_2:3577016-3577035 None:intergenic 45.0%
AGTTAGAAGGTGACGATGGA+AGG + chr5_2:3577134-3577153 Msa0750180:exon 45.0%
GAACGTAGTTAGCGTTGCAT+TGG - chr5_2:3577166-3577185 None:intergenic 45.0%
AAGAAGCTGATTGGAGTGAG+AGG - chr5_2:3577188-3577207 None:intergenic 45.0%
TCTCACTCCAATCAGCTTCT+TGG + chr5_2:3577187-3577206 Msa0750180:CDS 45.0%
GGTGACATCGTTGTAGATGA+TGG - chr5_2:3577246-3577265 None:intergenic 45.0%
ACAACGATGTCACCTACACA+TGG + chr5_2:3577252-3577271 Msa0750180:CDS 45.0%
! ATGAGTCTGAGACCATGTGT+AGG - chr5_2:3577267-3577286 None:intergenic 45.0%
CTTGAGCAGCAATACTCCAA+GGG - chr5_2:3578256-3578275 None:intergenic 45.0%
AGCACAAAGTAACACACACG+GGG + chr5_2:3578336-3578355 Msa0750180:CDS 45.0%
AGTGGCTTTCTGATATCAGG+TGG - chr5_2:3578398-3578417 None:intergenic 45.0%
GGAAGTGGCTTTCTGATATC+AGG - chr5_2:3578401-3578420 None:intergenic 45.0%
GATATCAGAAAGCCACTTCC+GGG + chr5_2:3578401-3578420 Msa0750180:CDS 45.0%
ATATCAGAAAGCCACTTCCG+GGG + chr5_2:3578402-3578421 Msa0750180:CDS 45.0%
AAGGTAGTAGTGATGACAGG+CGG + chr5_2:3578425-3578444 Msa0750180:CDS 45.0%
CTAAAAAATACGTCCGGTGG+CGG - chr5_2:3578458-3578477 None:intergenic 45.0%
GTCCTGGATCAATTTGCACA+TGG + chr5_2:3578534-3578553 Msa0750180:CDS 45.0%
GCGAAAAAGAAGTCACGTCA+AGG + chr5_2:3578593-3578612 Msa0750180:CDS 45.0%
GGTACACTCTTCATTGTGAC+AGG - chr5_2:3578659-3578678 None:intergenic 45.0%
CATGGGTGAGGTGATGTTTA+GGG + chr5_2:3578694-3578713 Msa0750180:CDS 45.0%
ATGGGTGAGGTGATGTTTAG+GGG + chr5_2:3578695-3578714 Msa0750180:CDS 45.0%
AGGGGAAACACTGTGATGAA+TGG + chr5_2:3578713-3578732 Msa0750180:CDS 45.0%
! AAAGGTGGATGGTTTAGGAC+TGG + chr5_2:3578773-3578792 Msa0750180:CDS 45.0%
! ATGGTTTAGGACTGGTGACT+TGG + chr5_2:3578781-3578800 Msa0750180:CDS 45.0%
! TGGTTTAGGACTGGTGACTT+GGG + chr5_2:3578782-3578801 Msa0750180:CDS 45.0%
AGAACTTAAGGATCGGTCGA+AGG + chr5_2:3578829-3578848 Msa0750180:CDS 45.0%
TAGTCATCCAGCAGTTGTTG+AGG + chr5_2:3578910-3578929 Msa0750180:CDS 45.0%
TTGTTGAGGCAGCTGTTGTT+GGG + chr5_2:3578924-3578943 Msa0750180:CDS 45.0%
TTGGGAGACCTGATGAGTAT+TGG + chr5_2:3578942-3578961 Msa0750180:CDS 45.0%
TGGGAGACCTGATGAGTATT+GGG + chr5_2:3578943-3578962 Msa0750180:CDS 45.0%
CGTTTGTGAAGTTGAAGGGA+GGG + chr5_2:3578981-3579000 Msa0750180:CDS 45.0%
GATCTGCCAAAGACATCAAC+CGG + chr5_2:3579088-3579107 Msa0750180:CDS 45.0%
AAGGAGAAGGCAAAGGCTAT+GGG + chr5_2:3579133-3579152 Msa0750180:CDS 45.0%
CATATTGCGTGGATGTCATG+TGG - chr5_2:3577005-3577024 None:intergenic 45.0%
CACATGACATCCACGCAATA+TGG + chr5_2:3577003-3577022 Msa0750180:five_prime_UTR 45.0%
CATGACATCCACGCAATATG+GGG + chr5_2:3577005-3577024 Msa0750180:five_prime_UTR 45.0%
TGTATTTGCCCCATATTGCG+TGG - chr5_2:3577016-3577035 None:intergenic 45.0%
AGTTAGAAGGTGACGATGGA+AGG + chr5_2:3577134-3577153 Msa0750180:exon 45.0%
GAACGTAGTTAGCGTTGCAT+TGG - chr5_2:3577166-3577185 None:intergenic 45.0%
AAGAAGCTGATTGGAGTGAG+AGG - chr5_2:3577188-3577207 None:intergenic 45.0%
TCTCACTCCAATCAGCTTCT+TGG + chr5_2:3577187-3577206 Msa0750180:CDS 45.0%
GGTGACATCGTTGTAGATGA+TGG - chr5_2:3577246-3577265 None:intergenic 45.0%
ACAACGATGTCACCTACACA+TGG + chr5_2:3577252-3577271 Msa0750180:CDS 45.0%
! ATGAGTCTGAGACCATGTGT+AGG - chr5_2:3577267-3577286 None:intergenic 45.0%
CTTGAGCAGCAATACTCCAA+GGG - chr5_2:3578256-3578275 None:intergenic 45.0%
AGCACAAAGTAACACACACG+GGG + chr5_2:3578336-3578355 Msa0750180:CDS 45.0%
AGTGGCTTTCTGATATCAGG+TGG - chr5_2:3578398-3578417 None:intergenic 45.0%
GGAAGTGGCTTTCTGATATC+AGG - chr5_2:3578401-3578420 None:intergenic 45.0%
GATATCAGAAAGCCACTTCC+GGG + chr5_2:3578401-3578420 Msa0750180:CDS 45.0%
ATATCAGAAAGCCACTTCCG+GGG + chr5_2:3578402-3578421 Msa0750180:CDS 45.0%
AAGGTAGTAGTGATGACAGG+CGG + chr5_2:3578425-3578444 Msa0750180:CDS 45.0%
CTAAAAAATACGTCCGGTGG+CGG - chr5_2:3578458-3578477 None:intergenic 45.0%
GTCCTGGATCAATTTGCACA+TGG + chr5_2:3578534-3578553 Msa0750180:CDS 45.0%
GCGAAAAAGAAGTCACGTCA+AGG + chr5_2:3578593-3578612 Msa0750180:CDS 45.0%
GGTACACTCTTCATTGTGAC+AGG - chr5_2:3578659-3578678 None:intergenic 45.0%
CATGGGTGAGGTGATGTTTA+GGG + chr5_2:3578694-3578713 Msa0750180:CDS 45.0%
ATGGGTGAGGTGATGTTTAG+GGG + chr5_2:3578695-3578714 Msa0750180:CDS 45.0%
AGGGGAAACACTGTGATGAA+TGG + chr5_2:3578713-3578732 Msa0750180:CDS 45.0%
! AAAGGTGGATGGTTTAGGAC+TGG + chr5_2:3578773-3578792 Msa0750180:CDS 45.0%
! ATGGTTTAGGACTGGTGACT+TGG + chr5_2:3578781-3578800 Msa0750180:CDS 45.0%
! TGGTTTAGGACTGGTGACTT+GGG + chr5_2:3578782-3578801 Msa0750180:CDS 45.0%
AGAACTTAAGGATCGGTCGA+AGG + chr5_2:3578829-3578848 Msa0750180:CDS 45.0%
TAGTCATCCAGCAGTTGTTG+AGG + chr5_2:3578910-3578929 Msa0750180:CDS 45.0%
TTGTTGAGGCAGCTGTTGTT+GGG + chr5_2:3578924-3578943 Msa0750180:CDS 45.0%
TTGGGAGACCTGATGAGTAT+TGG + chr5_2:3578942-3578961 Msa0750180:CDS 45.0%
TGGGAGACCTGATGAGTATT+GGG + chr5_2:3578943-3578962 Msa0750180:CDS 45.0%
CGTTTGTGAAGTTGAAGGGA+GGG + chr5_2:3578981-3579000 Msa0750180:CDS 45.0%
GATCTGCCAAAGACATCAAC+CGG + chr5_2:3579088-3579107 Msa0750180:CDS 45.0%
AAGGAGAAGGCAAAGGCTAT+GGG + chr5_2:3579133-3579152 Msa0750180:CDS 45.0%
CGGTGTTTCTCCTCATGATG+TGG + chr5_2:3577325-3577344 Msa0750180:CDS 50.0%
GTATCCGACATGTGTCTGTC+TGG + chr5_2:3577479-3577498 Msa0750180:intron 50.0%
TAGGCCAGACAGACACATGT+CGG - chr5_2:3577486-3577505 None:intergenic 50.0%
CATAGAACAGCCCCTGACAT+TGG - chr5_2:3577792-3577811 None:intergenic 50.0%
AATGTTCCGGGAGAGACTGA+TGG - chr5_2:3577993-3578012 None:intergenic 50.0%
CCTTGAGCAGCAATACTCCA+AGG - chr5_2:3578257-3578276 None:intergenic 50.0%
!! CCTTGGAGTATTGCTGCTCA+AGG + chr5_2:3578254-3578273 Msa0750180:CDS 50.0%
!! TGGAGTATTGCTGCTCAAGG+TGG + chr5_2:3578257-3578276 Msa0750180:CDS 50.0%
GCACAAAGTAACACACACGG+GGG + chr5_2:3578337-3578356 Msa0750180:CDS 50.0%
CACAAAGTAACACACACGGG+GGG + chr5_2:3578338-3578357 Msa0750180:CDS 50.0%
GTCATCACTACTACCTTCCC+CGG - chr5_2:3578422-3578441 None:intergenic 50.0%
GGGAAGGTAGTAGTGATGAC+AGG + chr5_2:3578422-3578441 Msa0750180:CDS 50.0%
!!! CGCCACCGGACGTATTTTTT+AGG + chr5_2:3578456-3578475 Msa0750180:CDS 50.0%
TGATGCGAAAACCATGGGTG+AGG + chr5_2:3578682-3578701 Msa0750180:CDS 50.0%
CCTAAACATCACCTCACCCA+TGG - chr5_2:3578696-3578715 None:intergenic 50.0%
CCATGGGTGAGGTGATGTTT+AGG + chr5_2:3578693-3578712 Msa0750180:CDS 50.0%
GTTGTTGAGGCAGCTGTTGT+TGG + chr5_2:3578923-3578942 Msa0750180:CDS 50.0%
! GGGAGACCTGATGAGTATTG+GGG + chr5_2:3578944-3578963 Msa0750180:CDS 50.0%
GTCTCTCCCCAATACTCATC+AGG - chr5_2:3578953-3578972 None:intergenic 50.0%
GCGTTTGTGAAGTTGAAGGG+AGG + chr5_2:3578980-3578999 Msa0750180:CDS 50.0%
! GTCTTGCCGGTTGATGTCTT+TGG - chr5_2:3579097-3579116 None:intergenic 50.0%
GAAGGAGAAGGCAAAGGCTA+TGG + chr5_2:3579132-3579151 Msa0750180:CDS 50.0%
CGGTGTTTCTCCTCATGATG+TGG + chr5_2:3577325-3577344 Msa0750180:CDS 50.0%
GTATCCGACATGTGTCTGTC+TGG + chr5_2:3577479-3577498 Msa0750180:intron 50.0%
TAGGCCAGACAGACACATGT+CGG - chr5_2:3577486-3577505 None:intergenic 50.0%
CATAGAACAGCCCCTGACAT+TGG - chr5_2:3577792-3577811 None:intergenic 50.0%
AATGTTCCGGGAGAGACTGA+TGG - chr5_2:3577993-3578012 None:intergenic 50.0%
CCTTGAGCAGCAATACTCCA+AGG - chr5_2:3578257-3578276 None:intergenic 50.0%
!! CCTTGGAGTATTGCTGCTCA+AGG + chr5_2:3578254-3578273 Msa0750180:CDS 50.0%
!! TGGAGTATTGCTGCTCAAGG+TGG + chr5_2:3578257-3578276 Msa0750180:CDS 50.0%
GCACAAAGTAACACACACGG+GGG + chr5_2:3578337-3578356 Msa0750180:CDS 50.0%
CACAAAGTAACACACACGGG+GGG + chr5_2:3578338-3578357 Msa0750180:CDS 50.0%
GTCATCACTACTACCTTCCC+CGG - chr5_2:3578422-3578441 None:intergenic 50.0%
GGGAAGGTAGTAGTGATGAC+AGG + chr5_2:3578422-3578441 Msa0750180:CDS 50.0%
!!! CGCCACCGGACGTATTTTTT+AGG + chr5_2:3578456-3578475 Msa0750180:CDS 50.0%
TGATGCGAAAACCATGGGTG+AGG + chr5_2:3578682-3578701 Msa0750180:CDS 50.0%
CCTAAACATCACCTCACCCA+TGG - chr5_2:3578696-3578715 None:intergenic 50.0%
CCATGGGTGAGGTGATGTTT+AGG + chr5_2:3578693-3578712 Msa0750180:CDS 50.0%
GTTGTTGAGGCAGCTGTTGT+TGG + chr5_2:3578923-3578942 Msa0750180:CDS 50.0%
! GGGAGACCTGATGAGTATTG+GGG + chr5_2:3578944-3578963 Msa0750180:CDS 50.0%
GTCTCTCCCCAATACTCATC+AGG - chr5_2:3578953-3578972 None:intergenic 50.0%
GCGTTTGTGAAGTTGAAGGG+AGG + chr5_2:3578980-3578999 Msa0750180:CDS 50.0%
! GTCTTGCCGGTTGATGTCTT+TGG - chr5_2:3579097-3579116 None:intergenic 50.0%
GAAGGAGAAGGCAAAGGCTA+TGG + chr5_2:3579132-3579151 Msa0750180:CDS 50.0%
GAGCGCTCCAAGAAGCTGAT+TGG - chr5_2:3577197-3577216 None:intergenic 55.0%
GCTCATCCATCAGTCTCTCC+CGG + chr5_2:3577984-3578003 Msa0750180:CDS 55.0%
GCAATGGATGGTGTCTCCCT+TGG + chr5_2:3578237-3578256 Msa0750180:CDS 55.0%
ACTACTACCTTCCCCGGAAG+TGG - chr5_2:3578416-3578435 None:intergenic 55.0%
! AAAAATACGTCCGGTGGCGG+TGG - chr5_2:3578455-3578474 None:intergenic 55.0%
CGAGACAGGCTACTCCATTC+TGG - chr5_2:3578563-3578582 None:intergenic 55.0%
ATGGAGTAGCCTGTCTCGAG+AGG + chr5_2:3578565-3578584 Msa0750180:CDS 55.0%
ACCGGCTGATGCGAAAACCA+TGG + chr5_2:3578676-3578695 Msa0750180:CDS 55.0%
! CCCATGGTTTTCGCATCAGC+CGG - chr5_2:3578680-3578699 None:intergenic 55.0%
CCGGCTGATGCGAAAACCAT+GGG + chr5_2:3578677-3578696 Msa0750180:CDS 55.0%
ACAGCTGCCTCAACAACTGC+TGG - chr5_2:3578920-3578939 None:intergenic 55.0%
! GAAGGGAGGGCACAATGCTA+CGG + chr5_2:3578994-3579013 Msa0750180:CDS 55.0%
TGCGTGGATGTCATGTGGTC+CGG - chr5_2:3577000-3577019 None:intergenic 55.0%
GAGCGCTCCAAGAAGCTGAT+TGG - chr5_2:3577197-3577216 None:intergenic 55.0%
GCTCATCCATCAGTCTCTCC+CGG + chr5_2:3577984-3578003 Msa0750180:CDS 55.0%
GCAATGGATGGTGTCTCCCT+TGG + chr5_2:3578237-3578256 Msa0750180:CDS 55.0%
ACTACTACCTTCCCCGGAAG+TGG - chr5_2:3578416-3578435 None:intergenic 55.0%
! AAAAATACGTCCGGTGGCGG+TGG - chr5_2:3578455-3578474 None:intergenic 55.0%
CGAGACAGGCTACTCCATTC+TGG - chr5_2:3578563-3578582 None:intergenic 55.0%
ATGGAGTAGCCTGTCTCGAG+AGG + chr5_2:3578565-3578584 Msa0750180:CDS 55.0%
ACCGGCTGATGCGAAAACCA+TGG + chr5_2:3578676-3578695 Msa0750180:CDS 55.0%
! CCCATGGTTTTCGCATCAGC+CGG - chr5_2:3578680-3578699 None:intergenic 55.0%
CCGGCTGATGCGAAAACCAT+GGG + chr5_2:3578677-3578696 Msa0750180:CDS 55.0%
ACAGCTGCCTCAACAACTGC+TGG - chr5_2:3578920-3578939 None:intergenic 55.0%
! GAAGGGAGGGCACAATGCTA+CGG + chr5_2:3578994-3579013 Msa0750180:CDS 55.0%
CAGAAAGCCACTTCCGGGGA+AGG + chr5_2:3578406-3578425 Msa0750180:CDS 60.0%
TAGCCTGTCTCGAGAGGAGC+AGG + chr5_2:3578571-3578590 Msa0750180:CDS 60.0%
CAGAAAGCCACTTCCGGGGA+AGG + chr5_2:3578406-3578425 Msa0750180:CDS 60.0%
TAGCCTGTCTCGAGAGGAGC+AGG + chr5_2:3578571-3578590 Msa0750180:CDS 60.0%
TCGCCTGCTCCTCTCGAGAC+AGG - chr5_2:3578577-3578596 None:intergenic 65.0%
TCGCCTGCTCCTCTCGAGAC+AGG - chr5_2:3578577-3578596 None:intergenic 65.0%
AGGCGGTGCTCCACCGCCAC+CGG + chr5_2:3578442-3578461 Msa0750180:CDS 75.0%
AGGCGGTGCTCCACCGCCAC+CGG + chr5_2:3578442-3578461 Msa0750180:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 3576999 3579435 3576999 ID=Msa0750180;Name=Msa0750180
chr5_2 mRNA 3576999 3579435 3576999 ID=Msa0750180-mRNA-1;Parent=Msa0750180;Name=Msa0750180-mRNA-1;_AED=0.01;_eAED=0.01;_QI=150|1|1|1|1|1|2|243|551
chr5_2 exon 3576999 3577346 3576999 ID=Msa0750180-mRNA-1:exon:1258;Parent=Msa0750180-mRNA-1
chr5_2 exon 3577735 3579435 3577735 ID=Msa0750180-mRNA-1:exon:1259;Parent=Msa0750180-mRNA-1
chr5_2 five_prime_UTR 3576999 3577148 3576999 ID=Msa0750180-mRNA-1:five_prime_utr;Parent=Msa0750180-mRNA-1
chr5_2 CDS 3577149 3577346 3577149 ID=Msa0750180-mRNA-1:cds;Parent=Msa0750180-mRNA-1
chr5_2 CDS 3577735 3579192 3577735 ID=Msa0750180-mRNA-1:cds;Parent=Msa0750180-mRNA-1
chr5_2 three_prime_UTR 3579193 3579435 3579193 ID=Msa0750180-mRNA-1:three_prime_utr;Parent=Msa0750180-mRNA-1
Gene Sequence

>Msa0750180

ATGGAAGGTACTATCCAATGCAACGCTAACTACGTTCCTCTCACTCCAATCAGCTTCTTGGAGCGCTCCGCCATTGTTTACAATAACAAAGTCTCCATCATCTACAACGATGTCACCTACACATGGTCTCAGACTCATCAACGATGTATCAAACTCGCTTCTTCCATTTCTCAACTCGGTGTTTCTCCTCATGATGTGGTTGCTGTGTTGGCTCCTAATATTCCAGCAATGTATGAGCTGCATTTTGGTGTTCCAATGTCAGGGGCTGTTCTATGTACCTTGAATACTCGTCATGATTCGTTGATGGTTTCGTTGTTGTTAAAGCATTCCGACGCGAAAATCCTTTTTGTAGATCATGAATTACTTGATATTGCTAAGGGAGCACTTGAAATTTTGTCGAAATCAACTACCAATCTTCCACTTTTGGTCTTAATTTTGGAGGGTGATGCTCATCCATCAGTCTCTCCCGGAACATTGATCTATGAGAATCTTATATCCGAAGGGAAACTTGATTTTGAGGTGAAAAGACCAAAAGATGAATGGGATCCAATTTCTTTGAATTACACTTCAGGAACAACATCAAGTCCTAAAGGTGTAGTATATAGCCATAGAGGTGCTTATCTTAATTCTTTGGCTACAATTCTTCTCAATGAGATGAAGTCTATGCCGGTGTATTTATGGTGTGTTCCCATGTTTCATTGCAATGGATGGTGTCTCCCTTGGAGTATTGCTGCTCAAGGTGGCACAAATGTTTGCCAAAGAAATGTAACTGCTAAAGGGATATTTGACAATATTTTTAAGCACAAAGTAACACACACGGGGGGTGCACCAACAGTTCTGAACTCATTAATAAATGCACCACCTGATATCAGAAAGCCACTTCCGGGGAAGGTAGTAGTGATGACAGGCGGTGCTCCACCGCCACCGGACGTATTTTTTAGGATGGAAGAACTGGGATTTGATTTAGTTCATTCATATGGTTTGACAGAAACTTATGGTCCTGGATCAATTTGCACATGGAAACCAGAATGGAGTAGCCTGTCTCGAGAGGAGCAGGCGAAAAAGAAGTCACGTCAAGGAGTACAACATATTGGACTGGAAGGACTTGACATAAAAGATCCTGTCACAATGAAGAGTGTACCGGCTGATGCGAAAACCATGGGTGAGGTGATGTTTAGGGGAAACACTGTGATGAATGGATATCTAAAGGATTTAAAAGCAACACAAGAGTCATTTAAAGGTGGATGGTTTAGGACTGGTGACTTGGGAGTAAAGCATTCTGACGGTTACATAGAACTTAAGGATCGGTCGAAGGATATTATCATATCTGGGGGAGAAAACATTAGCACCATTGAGTTGGAAGGTGTTATTTATAGTCATCCAGCAGTTGTTGAGGCAGCTGTTGTTGGGAGACCTGATGAGTATTGGGGAGAGACACCTTGTGCGTTTGTGAAGTTGAAGGGAGGGCACAATGCTACGGAAGAAGAGATAATACAATTCTGTCAAAAGCGTTTGCCTCGTTTTATGGCTCCAAAAACTGTCGTGTTTGCTGATCTGCCAAAGACATCAACCGGCAAGACACAAAAATATGTTTTGAAGGAGAAGGCAAAGGCTATGGGAAGCTTGTCTAAGAAAAAGAATACAAGCCGACTGTAA
Protein sequence

>Msa0750180

MEGTIQCNANYVPLTPISFLERSAIVYNNKVSIIYNDVTYTWSQTHQRCIKLASSISQLGVSPHDVVAVLAPNIPAMYELHFGVPMSGAVLCTLNTRHDSLMVSLLLKHSDAKILFVDHELLDIAKGALEILSKSTTNLPLLVLILEGDAHPSVSPGTLIYENLISEGKLDFEVKRPKDEWDPISLNYTSGTTSSPKGVVYSHRGAYLNSLATILLNEMKSMPVYLWCVPMFHCNGWCLPWSIAAQGGTNVCQRNVTAKGIFDNIFKHKVTHTGGAPTVLNSLINAPPDIRKPLPGKVVVMTGGAPPPPDVFFRMEELGFDLVHSYGLTETYGPGSICTWKPEWSSLSREEQAKKKSRQGVQHIGLEGLDIKDPVTMKSVPADAKTMGEVMFRGNTVMNGYLKDLKATQESFKGGWFRTGDLGVKHSDGYIELKDRSKDIIISGGENISTIELEGVIYSHPAVVEAAVVGRPDEYWGETPCAFVKLKGGHNATEEEIIQFCQKRLPRFMAPKTVVFADLPKTSTGKTQKYVLKEKAKAMGSLSKKKNTSRL*