AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1015060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1015060 MtrunA17_Chr7g0228211 98.965 483 5 0 1 483 1 483 0.0 975
Msa1015060 MtrunA17_Chr1g0179021 54.060 431 193 2 3 428 4 434 2.90e-166 476
Msa1015060 MtrunA17_Chr8g0387461 44.575 424 214 9 7 418 62 476 1.81e-112 341
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1015060 AT3G27820.1 75.051 489 115 4 1 483 1 488 0.0 722
Msa1015060 AT3G52880.1 54.292 431 192 2 3 428 4 434 3.46e-164 471
Msa1015060 AT3G52880.2 50.540 463 192 3 3 428 4 466 7.02e-157 454
Msa1015060 AT5G03630.1 52.668 431 199 2 3 428 5 435 1.44e-153 444
Msa1015060 AT3G09940.1 46.472 411 214 3 22 426 24 434 3.51e-133 392
Msa1015060 AT3G09940.2 45.985 411 208 5 22 426 24 426 2.22e-126 375
Msa1015060 AT1G63940.1 43.392 401 207 8 23 412 72 463 5.78e-116 350
Msa1015060 AT1G63940.2 43.392 401 207 8 23 412 79 470 7.73e-116 350
Msa1015060 AT1G63940.4 43.142 401 204 10 23 412 72 459 9.29e-112 339
Msa1015060 AT1G63940.3 45.245 347 173 7 23 358 72 412 1.11e-103 316

Find 137 sgRNAs with CRISPR-Local

Find 486 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCGTGAATTCGAAATTA+AGG 0.177917 7_1:-26175157 None:intergenic
GCCGCATTTGCATATTATTA+TGG 0.194750 7_1:+26181199 Msa1015060:CDS
TCATAGTAGCTTGCAATCTT+TGG 0.199998 7_1:-26179536 None:intergenic
GTTGGGGAAGTTGTCTATTA+TGG 0.234121 7_1:+26180866 Msa1015060:CDS
TGCTTACTGCAATGTTCTTC+TGG 0.235386 7_1:-26179352 None:intergenic
GCTTTGAAGCTTGAAGAATT+TGG 0.241193 7_1:+26179148 Msa1015060:CDS
CATAGTAGCTTGCAATCTTT+GGG 0.242144 7_1:-26179535 None:intergenic
AATGAGAACTTTGTAACTTA+TGG 0.250984 7_1:-26178738 None:intergenic
CTTTGAAGCTTGAAGAATTT+GGG 0.252024 7_1:+26179149 Msa1015060:CDS
GGAATAACGAACGAAGAAAA+TGG 0.252181 7_1:+26175234 Msa1015060:exon
AAAGGTGGAATCAAAGTAAA+TGG 0.278964 7_1:+26180614 Msa1015060:CDS
CCTTCAAACAGACCTGTATT+TGG 0.291945 7_1:-26180575 None:intergenic
CATGGAGTGTGCGGCATCTT+TGG 0.297042 7_1:+26179297 Msa1015060:CDS
TCAGGAGTTGAGTTAGTTCT+TGG 0.301574 7_1:+26178656 Msa1015060:intron
GGAGCGAGTGGTTTCGTATA+AGG 0.311166 7_1:-26175119 None:intergenic
TAGCACATTTGGAGCATATT+GGG 0.326973 7_1:+26180907 Msa1015060:CDS
AAAACACTATTAACAACAAC+CGG 0.327095 7_1:+26178710 Msa1015060:CDS
ACATGCTGTTTCTGCCATAA+TGG 0.329299 7_1:+26180757 Msa1015060:CDS
ACCATGTTCTCTATACCATT+TGG 0.345910 7_1:-26177496 None:intergenic
GTCCACAGATATCTTTGTTC+CGG 0.347418 7_1:-26180525 None:intergenic
CTTCTTTAGTTCCACCTTCA+AGG 0.352026 7_1:-26180958 None:intergenic
CCATGTTCTCTATACCATTT+GGG 0.367359 7_1:-26177495 None:intergenic
TATCGTGAATTCGAAATTAA+GGG 0.370300 7_1:-26175156 None:intergenic
CTTAATGCAGGTCTTTCATA+AGG 0.374407 7_1:-26176844 None:intergenic
GCATTTCCAGTCAAAGCATT+TGG 0.376117 7_1:+26180686 Msa1015060:CDS
CTTGAAGAATTTGGGGTGAA+TGG 0.381404 7_1:+26179157 Msa1015060:CDS
TCAGCCGCAGGTAGCACATT+TGG 0.384502 7_1:+26180896 Msa1015060:CDS
GTAGCACATTTGGAGCATAT+TGG 0.386547 7_1:+26180906 Msa1015060:CDS
GGGATATAGCAGATGCAAAT+AGG 0.390158 7_1:+26179209 Msa1015060:CDS
GTTGTTGGAGCTTTCCTTGA+AGG 0.393109 7_1:+26180944 Msa1015060:CDS
TCATTGTTGCCACTGGTGCT+CGG 0.394744 7_1:+26178756 Msa1015060:CDS
AGAATTGTAATCCAGTGAAT+TGG 0.395851 7_1:-26181327 None:intergenic
AAGAGGAGTAAATTTCGTTA+AGG 0.396179 7_1:+26179574 Msa1015060:CDS
ATGTAAAAGAGATTATAATA+TGG 0.400295 7_1:-26181468 None:intergenic
GTTGAGTTAGTTCTTGGAAC+TGG 0.403454 7_1:+26178662 Msa1015060:CDS
AGAGGAGTAAATTTCGTTAA+GGG 0.404321 7_1:+26179575 Msa1015060:CDS
TCAGCCAAGTCTTCAATTGC+TGG 0.405203 7_1:-26181016 None:intergenic
GCGTTCGTTTACGTGATTCT+TGG 0.410893 7_1:+26175262 Msa1015060:CDS
CAGAAAATGTATGTTACTTA+CGG 0.411422 7_1:+26179188 Msa1015060:CDS
AACAGCTCAGTCTATGCTAT+TGG 0.424303 7_1:+26180653 Msa1015060:CDS
GTAGCATGCCAAGCATATAA+TGG 0.424570 7_1:-26181148 None:intergenic
TGAGTTGGAGAGGCAAGGTT+TGG 0.427202 7_1:+26181036 Msa1015060:CDS
TGGAAAGACCATTATATGCT+TGG 0.427257 7_1:+26181140 Msa1015060:CDS
TATGCTTGGCATGCTACAGC+TGG 0.429671 7_1:+26181154 Msa1015060:CDS
CTGAGAAGGTTACCGATTTG+TGG 0.429716 7_1:+26181249 Msa1015060:three_prime_UTR
CATTGTTGCCACTGGTGCTC+GGG 0.432006 7_1:+26178757 Msa1015060:CDS
GTTAACAAGGGTCATGTTGT+TGG 0.434558 7_1:+26180929 Msa1015060:CDS
GCTTACTGCAATGTTCTTCT+GGG 0.434566 7_1:-26179351 None:intergenic
GACATGGTTGTAGTGGGAAT+TGG 0.437394 7_1:+26180545 Msa1015060:CDS
GTTTGAAGGTCAACTTACTT+TGG 0.444751 7_1:+26180589 Msa1015060:CDS
TAACCTAGTGACCTTGGCTA+TGG 0.449349 7_1:-26180990 None:intergenic
ACAGCTGTTAATCTTAAAAC+CGG 0.453284 7_1:+26180506 Msa1015060:CDS
CCATCCTTTCATACATGTGT+TGG 0.457722 7_1:+26177450 Msa1015060:CDS
AGTGCTATTCAATCTTCTCC+TGG 0.467772 7_1:+26179238 Msa1015060:CDS
AGAAAATGTATGTTACTTAC+GGG 0.473505 7_1:+26179189 Msa1015060:CDS
AAATATCCTTTGCTTAATGC+AGG 0.475259 7_1:-26176856 None:intergenic
TTGTATCCTATCCAATTCAC+TGG 0.476259 7_1:+26181316 Msa1015060:three_prime_UTR
AATTGAAGACTTGGCTGAGT+TGG 0.476573 7_1:+26181021 Msa1015060:CDS
GAATAACGAACGAAGAAAAT+GGG 0.481152 7_1:+26175235 Msa1015060:exon
TGTTTCTGCCATAATGGAAC+CGG 0.481633 7_1:+26180763 Msa1015060:CDS
GTGCTGCTGCTAACCTCAAT+TGG 0.481927 7_1:-26181103 None:intergenic
AAGCATTTGGTGAAATGCGC+AGG 0.483899 7_1:+26180699 Msa1015060:CDS
AAAGTTCTCATTGTTGCCAC+TGG 0.484993 7_1:+26178749 Msa1015060:CDS
ATTGGTGGTGGTGATGCCAC+TGG 0.486890 7_1:-26181085 None:intergenic
TAGCCAAGGTCACTAGGTTA+AGG 0.488657 7_1:+26180993 Msa1015060:CDS
ATGCTTGGCATGCTACAGCT+GGG 0.494794 7_1:+26181155 Msa1015060:CDS
GGAGGGAATGCCATTGTCAT+TGG 0.497388 7_1:+26179259 Msa1015060:CDS
CCAGAGTCTTCACTCTGTCT+TGG 0.500744 7_1:+26180825 Msa1015060:CDS
GGTCAACTTACTTTGGAGAA+AGG 0.502678 7_1:+26180596 Msa1015060:CDS
AAGGCCAGCAATTGAAGACT+TGG 0.503738 7_1:+26181012 Msa1015060:CDS
ATTTCACCAAATGCTTTGAC+TGG 0.507490 7_1:-26180692 None:intergenic
GGGAATGCCATTGTCATTGG+TGG 0.513000 7_1:+26179262 Msa1015060:CDS
AATGATACAAAGTTCACCAT+TGG 0.513547 7_1:-26175338 None:intergenic
CTTGGTGGTGGTGTATCAGC+TGG 0.514363 7_1:+26175280 Msa1015060:CDS
TTCGTTTACGTGATTCTTGG+TGG 0.515424 7_1:+26175265 Msa1015060:CDS
TTTGTAACTTATGGTTTCCC+CGG 0.519828 7_1:-26178729 None:intergenic
CCAAATACAGGTCTGTTTGA+AGG 0.523257 7_1:+26180575 Msa1015060:CDS
TGGTCTTTCCAAAAGTAAAA+CGG 0.523433 7_1:-26181128 None:intergenic
TCACGATAATAAATAAGATA+AGG 0.524913 7_1:+26175171 Msa1015060:five_prime_UTR
TACATGTGTTGGCGCAAATG+AGG 0.525033 7_1:+26177461 Msa1015060:CDS
ATGACAATGGCATTCCCTCC+AGG 0.527956 7_1:-26179256 None:intergenic
CTGCTAACCTCAATTGGTGG+TGG 0.528850 7_1:-26181097 None:intergenic
AGGAAAGGCTAACTCCCAAA+TGG 0.530316 7_1:+26177481 Msa1015060:CDS
TGAAGCCCTTGACCACAAAT+CGG 0.530864 7_1:-26181261 None:intergenic
CCCAAATGGTATAGAGAACA+TGG 0.531344 7_1:+26177495 Msa1015060:CDS
TGGCCTTAACCTAGTGACCT+TGG 0.536164 7_1:-26180996 None:intergenic
ATTGGAATACGACCAAATAC+AGG 0.545458 7_1:+26180563 Msa1015060:CDS
GGTTACCGATTTGTGGTCAA+GGG 0.545842 7_1:+26181256 Msa1015060:three_prime_UTR
GGCATCACCACCACCAATTG+AGG 0.547466 7_1:+26181090 Msa1015060:CDS
GTTGGAGCTTTCCTTGAAGG+TGG 0.550130 7_1:+26180947 Msa1015060:CDS
TGGGAATAGCTTCTGAATGA+TGG 0.550843 7_1:-26181410 None:intergenic
GTCATTGGTGGTGGATACAT+TGG 0.553697 7_1:+26179274 Msa1015060:CDS
AAGCCATAGCCAAGGTCACT+AGG 0.553819 7_1:+26180987 Msa1015060:CDS
CAACTTACTTTGGAGAAAGG+TGG 0.555274 7_1:+26180599 Msa1015060:CDS
ATCTGTGGACATGGTTGTAG+TGG 0.557175 7_1:+26180538 Msa1015060:CDS
GAAGAATATTATAAATCAAG+AGG 0.558433 7_1:+26179557 Msa1015060:CDS
TTGGCTGAGTTGGAGAGGCA+AGG 0.563958 7_1:+26181031 Msa1015060:CDS
GTTTACGTGATTCTTGGTGG+TGG 0.567807 7_1:+26175268 Msa1015060:CDS
TGTAATCCAGTGAATTGGAT+AGG 0.569856 7_1:-26181322 None:intergenic
TGGAGCATATTGGGTTAACA+AGG 0.573536 7_1:+26180916 Msa1015060:CDS
CTGCTGCTAACCTCAATTGG+TGG 0.574363 7_1:-26181100 None:intergenic
CAATAAAATCAGTGTAACAA+TGG 0.576465 7_1:+26179324 Msa1015060:CDS
AATGCCATTGTCATTGGTGG+TGG 0.576779 7_1:+26179265 Msa1015060:CDS
TTTGAAGCTTGAAGAATTTG+GGG 0.577488 7_1:+26179150 Msa1015060:CDS
CCAACACATGTATGAAAGGA+TGG 0.577689 7_1:-26177450 None:intergenic
TATGGAGATCTCTCAGCCGC+AGG 0.578508 7_1:+26180884 Msa1015060:CDS
TCCATAATAATATGCAAATG+CGG 0.578899 7_1:-26181200 None:intergenic
AAGACTTGGCTGAGTTGGAG+AGG 0.580952 7_1:+26181026 Msa1015060:CDS
AAAGGATATTTGCTTCCAGA+AGG 0.580991 7_1:+26176868 Msa1015060:CDS
AGGTTACCGATTTGTGGTCA+AGG 0.581974 7_1:+26181255 Msa1015060:three_prime_UTR
GTTAAACGTGGTGTTTCCAA+TGG 0.585015 7_1:+26175322 Msa1015060:CDS
TGCGCCAACACATGTATGAA+AGG 0.589333 7_1:-26177454 None:intergenic
CTCAGAAGTTTCACCATCTG+CGG 0.591356 7_1:-26181231 None:intergenic
GAAAGACCTGCATTAAGCAA+AGG 0.593530 7_1:+26176850 Msa1015060:CDS
CCAAGACAGAGTGAAGACTC+TGG 0.595322 7_1:-26180825 None:intergenic
AGAGTATGAAGCCATAGCCA+AGG 0.597817 7_1:+26180979 Msa1015060:CDS
TTGTTATGTTGTGTATGTGA+AGG 0.602299 7_1:+26175213 Msa1015060:five_prime_UTR
TGTAACCTACAGCTGCTGCT+CGG 0.603323 7_1:+26177424 Msa1015060:intron
CGAGTGGTTTCGTATAAGGA+AGG 0.610806 7_1:-26175115 None:intergenic
CTATTCAATCTTCTCCTGGA+GGG 0.613579 7_1:+26179242 Msa1015060:CDS
AACAAAGATATCTGTGGACA+TGG 0.616089 7_1:+26180529 Msa1015060:CDS
AGATGGTGAAACTTCTGAGA+AGG 0.620320 7_1:+26181235 Msa1015060:exon
GTATCCACCACCAATGACAA+TGG 0.625212 7_1:-26179269 None:intergenic
AAACACTATTAACAACAACC+GGG 0.625250 7_1:+26178711 Msa1015060:CDS
GCTCTTGAATTTGTTAAACG+TGG 0.627019 7_1:+26175310 Msa1015060:CDS
GTGTTGGCGCAAATGAGGAA+AGG 0.627684 7_1:+26177466 Msa1015060:CDS
ATAGTAGCTTGCAATCTTTG+GGG 0.641121 7_1:-26179534 None:intergenic
GGAGCATATTGGGTTAACAA+GGG 0.645005 7_1:+26180917 Msa1015060:CDS
AACCGGAACAAAGATATCTG+TGG 0.646222 7_1:+26180523 Msa1015060:CDS
TGCTCCAAATGTGCTACCTG+CGG 0.650116 7_1:-26180900 None:intergenic
TGGTGGTGGATACATTGGCA+TGG 0.653480 7_1:+26179279 Msa1015060:CDS
TCTGTGGACATGGTTGTAGT+GGG 0.657144 7_1:+26180539 Msa1015060:CDS
TGCTTGGCATGCTACAGCTG+GGG 0.662770 7_1:+26181156 Msa1015060:CDS
AACACTATTAACAACAACCG+GGG 0.664122 7_1:+26178712 Msa1015060:CDS
GCTATTCAATCTTCTCCTGG+AGG 0.679148 7_1:+26179241 Msa1015060:CDS
ATACATTGGCATGGAGTGTG+CGG 0.684973 7_1:+26179288 Msa1015060:CDS
TACAGTTAGTCAGAAACCAG+TGG 0.696117 7_1:+26181069 Msa1015060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTAGATTTTTGATTA+TGG + chr7_1:26176657-26176676 Msa1015060:intron 10.0%
!! AATAAATAACATAAAAGAAT+TGG - chr7_1:26176959-26176978 None:intergenic 10.0%
!! GTATTTCATAAAAAATAATA+AGG - chr7_1:26178494-26178513 None:intergenic 10.0%
!!! TATTATTTTTTATGAAATAC+CGG + chr7_1:26178494-26178513 Msa1015060:intron 10.0%
!!! TTTTTTATATTGTAATTCAA+AGG + chr7_1:26178587-26178606 Msa1015060:intron 10.0%
!! AAATAAGTTATAAATCTTCA+GGG - chr7_1:26176337-26176356 None:intergenic 15.0%
!! AAAATAAGTTATAAATCTTC+AGG - chr7_1:26176338-26176357 None:intergenic 15.0%
!! TTATATAGTCAATTACTTTA+TGG + chr7_1:26176363-26176382 Msa1015060:intron 15.0%
!! TAATATATAAACTTCAATGT+GGG + chr7_1:26177141-26177160 Msa1015060:intron 15.0%
!!! ATTAATATGTTTTAACCAAA+GGG - chr7_1:26177590-26177609 None:intergenic 15.0%
!!! AATTAATATGTTTTAACCAA+AGG - chr7_1:26177591-26177610 None:intergenic 15.0%
!!! AAACTATTTAACACATTTTT+AGG - chr7_1:26177777-26177796 None:intergenic 15.0%
!!! ATAATAAATTTTAAACGTGT+TGG - chr7_1:26177878-26177897 None:intergenic 15.0%
!!! AATATGTAAATGTTTTTGAT+AGG + chr7_1:26178273-26178292 Msa1015060:intron 15.0%
!!! ATTATTTTTTATGAAATACC+GGG + chr7_1:26178495-26178514 Msa1015060:intron 15.0%
!!! AATAGTTTCATGTATTTTAA+GGG - chr7_1:26178969-26178988 None:intergenic 15.0%
!!! TAATAGTTTCATGTATTTTA+AGG - chr7_1:26178970-26178989 None:intergenic 15.0%
!! TTAAAATACATGAAACTATT+AGG + chr7_1:26178969-26178988 Msa1015060:intron 15.0%
!!! TACATCAATTTTTTTTTTGT+TGG + chr7_1:26179639-26179658 Msa1015060:intron 15.0%
!! ATGTAAAAGAGATTATAATA+TGG - chr7_1:26181471-26181490 None:intergenic 15.0%
!! TCACGATAATAAATAAGATA+AGG + chr7_1:26175171-26175190 Msa1015060:five_prime_UTR 20.0%
!!! TTTTTTTGAATGTTGTGTAT+TGG + chr7_1:26175403-26175422 Msa1015060:intron 20.0%
!!! TTTTTTGAATGTTGTGTATT+GGG + chr7_1:26175404-26175423 Msa1015060:intron 20.0%
!!! TCATTCTTTTAGATTATTAC+CGG - chr7_1:26175534-26175553 None:intergenic 20.0%
!! AAGAATGAATTAATTGTGTA+TGG + chr7_1:26175546-26175565 Msa1015060:intron 20.0%
!!! TATATAGATATTTTATGTCC+TGG + chr7_1:26176121-26176140 Msa1015060:intron 20.0%
!!! ATATAGATATTTTATGTCCT+GGG + chr7_1:26176122-26176141 Msa1015060:intron 20.0%
!! AATAAGTTATAAATCTTCAG+GGG - chr7_1:26176336-26176355 None:intergenic 20.0%
!!! TTATCTTCTTTGTTTTGTAA+TGG + chr7_1:26176781-26176800 Msa1015060:intron 20.0%
!! ATAACATAAAAGAATTGGAT+TGG - chr7_1:26176954-26176973 None:intergenic 20.0%
!! AACAATCCAATTCTTTAATT+TGG + chr7_1:26176989-26177008 Msa1015060:intron 20.0%
!!! CAATTCTTTAATTTGGAATT+GGG + chr7_1:26176996-26177015 Msa1015060:intron 20.0%
!! CTAATATATAAACTTCAATG+TGG + chr7_1:26177140-26177159 Msa1015060:intron 20.0%
!! AATATATAAACTTCAATGTG+GGG + chr7_1:26177142-26177161 Msa1015060:intron 20.0%
!! GTAAATTTGAAAGATTTAAC+TGG + chr7_1:26177257-26177276 Msa1015060:intron 20.0%
!!! TTTCTATTTTAGAGACAATA+AGG - chr7_1:26177372-26177391 None:intergenic 20.0%
!!! AACATATTAATTGCTTTTGT+TGG + chr7_1:26177599-26177618 Msa1015060:intron 20.0%
!! CAATCGGAAATAATTAATTT+AGG - chr7_1:26177698-26177717 None:intergenic 20.0%
!!! AAATTGTTTTACTGATTTTC+AGG + chr7_1:26177731-26177750 Msa1015060:intron 20.0%
!! TGGTGAAAATTAATGAATAA+AGG + chr7_1:26177837-26177856 Msa1015060:intron 20.0%
!! AGAAAATAACTGATAAAACA+TGG - chr7_1:26178028-26178047 None:intergenic 20.0%
!!! AAATCAGTTTTACATAGATA+AGG - chr7_1:26178086-26178105 None:intergenic 20.0%
!! CATGAATATTATTACCAATT+GGG - chr7_1:26178223-26178242 None:intergenic 20.0%
!! ACATGAATATTATTACCAAT+TGG - chr7_1:26178224-26178243 None:intergenic 20.0%
!! TAAAACAAAAAATTACTTCC+TGG - chr7_1:26178253-26178272 None:intergenic 20.0%
!! TTTATATTGTAATTCAAAGG+AGG + chr7_1:26178590-26178609 Msa1015060:intron 20.0%
!! TTATATTGTAATTCAAAGGA+GGG + chr7_1:26178591-26178610 Msa1015060:intron 20.0%
!! AAAAAAAATGAAAGAACCTT+TGG + chr7_1:26178874-26178893 Msa1015060:intron 20.0%
!!! AATTTTATTGTCTGTGTATA+TGG + chr7_1:26179384-26179403 Msa1015060:intron 20.0%
!!! ATTTTATTGTCTGTGTATAT+GGG + chr7_1:26179385-26179404 Msa1015060:intron 20.0%
!!! ATATTGGATTTATTTTACAG+TGG + chr7_1:26179499-26179518 Msa1015060:intron 20.0%
!! GAAGAATATTATAAATCAAG+AGG + chr7_1:26179557-26179576 Msa1015060:CDS 20.0%
!!! TTAAGAGTATTAAAGTGATA+CGG - chr7_1:26179991-26180010 None:intergenic 20.0%
!!! CTTATTTAGAAGAGTTTTTT+TGG - chr7_1:26180051-26180070 None:intergenic 20.0%
!! CAAAAAAACTCTTCTAAATA+AGG + chr7_1:26180049-26180068 Msa1015060:intron 20.0%
!!! ATTTTTTTGAAATGCCATTA+AGG - chr7_1:26180169-26180188 None:intergenic 20.0%
!! AATGGCATTTCAAAAAAATT+TGG + chr7_1:26180170-26180189 Msa1015060:intron 20.0%
!! ATTCAAAATGAGATAATTAG+AGG + chr7_1:26180316-26180335 Msa1015060:intron 20.0%
!!! TTATAGCTTGATTTTATCAA+AGG - chr7_1:26180461-26180480 None:intergenic 20.0%
! TATCGTGAATTCGAAATTAA+GGG - chr7_1:26175159-26175178 None:intergenic 25.0%
! TTATCGTGAATTCGAAATTA+AGG - chr7_1:26175160-26175179 None:intergenic 25.0%
! TTTAGAGACTAAAGAGAATA+AGG + chr7_1:26175612-26175631 Msa1015060:intron 25.0%
!! TATCTTTTCTATGTGAAACT+TGG + chr7_1:26176019-26176038 Msa1015060:intron 25.0%
!! ATCTTTTCTATGTGAAACTT+GGG + chr7_1:26176020-26176039 Msa1015060:intron 25.0%
! ACAACAACACTAAAACATAA+AGG - chr7_1:26176182-26176201 None:intergenic 25.0%
! ATATAAAAGTGATTGAATGC+AGG + chr7_1:26176282-26176301 Msa1015060:intron 25.0%
! TATAAAAGTGATTGAATGCA+GGG + chr7_1:26176283-26176302 Msa1015060:intron 25.0%
! TTTGCGTAAAAATAGTAGTT+AGG + chr7_1:26176418-26176437 Msa1015060:intron 25.0%
! TTGCGTAAAAATAGTAGTTA+GGG + chr7_1:26176419-26176438 Msa1015060:intron 25.0%
!! TTTTTGTACTGAACATAGAA+AGG + chr7_1:26176564-26176583 Msa1015060:intron 25.0%
!! TTTTGTACTGAACATAGAAA+GGG + chr7_1:26176565-26176584 Msa1015060:intron 25.0%
! AATCAGGAATCAAAATTCAA+GGG - chr7_1:26176685-26176704 None:intergenic 25.0%
! TAATCAGGAATCAAAATTCA+AGG - chr7_1:26176686-26176705 None:intergenic 25.0%
!! TGTTGATAAATGTTTATCTC+AGG + chr7_1:26176816-26176835 Msa1015060:intron 25.0%
! CCAATTCCAAATTAAAGAAT+TGG - chr7_1:26176998-26177017 None:intergenic 25.0%
!!! CCAATTCTTTAATTTGGAAT+TGG + chr7_1:26176995-26177014 Msa1015060:intron 25.0%
!! AATTTTGCTCTTTGGTTATA+TGG + chr7_1:26177027-26177046 Msa1015060:intron 25.0%
! ACAAGCTATATTACTTAGTT+GGG + chr7_1:26177090-26177109 Msa1015060:intron 25.0%
! AATTCTATATTTGAACAACG+AGG - chr7_1:26177328-26177347 None:intergenic 25.0%
! TAGAAAGTTTGTAGAATTTC+TGG + chr7_1:26177386-26177405 Msa1015060:intron 25.0%
! AGGCTAACTAAATTAATTCA+TGG - chr7_1:26177555-26177574 None:intergenic 25.0%
! TCGGAAATAATTAATTTAGG+TGG - chr7_1:26177695-26177714 None:intergenic 25.0%
!! TTTTCCAATGATGTTTCAAT+CGG - chr7_1:26177714-26177733 None:intergenic 25.0%
!! ATAAATTTTAAACGTGTTGG+CGG - chr7_1:26177875-26177894 None:intergenic 25.0%
! AATATATCTCCGACATTTAA+TGG + chr7_1:26177967-26177986 Msa1015060:intron 25.0%
! AAGAGCTAAATTAAATGCAT+TGG + chr7_1:26178179-26178198 Msa1015060:intron 25.0%
!!! AATGTTTTTGATAGGCAAAT+AGG + chr7_1:26178281-26178300 Msa1015060:intron 25.0%
! ATAGGCAAATAGGTAAATAT+AGG + chr7_1:26178291-26178310 Msa1015060:intron 25.0%
! AAAACACTATTAACAACAAC+CGG + chr7_1:26178710-26178729 Msa1015060:CDS 25.0%
! AATGAGAACTTTGTAACTTA+TGG - chr7_1:26178741-26178760 None:intergenic 25.0%
!!! CTTGTAACGTTCTTTTTTAT+TGG + chr7_1:26178914-26178933 Msa1015060:intron 25.0%
! ACGTATTATGTTAATAAGGA+CGG - chr7_1:26179030-26179049 None:intergenic 25.0%
! TCCTTATTAACATAATACGT+GGG + chr7_1:26179030-26179049 Msa1015060:intron 25.0%
!! CAGAAAATGTATGTTACTTA+CGG + chr7_1:26179188-26179207 Msa1015060:CDS 25.0%
!! AGAAAATGTATGTTACTTAC+GGG + chr7_1:26179189-26179208 Msa1015060:CDS 25.0%
! CAATAAAATCAGTGTAACAA+TGG + chr7_1:26179324-26179343 Msa1015060:CDS 25.0%
!!! CTGATGGGTATTTTATATAT+TGG + chr7_1:26179483-26179502 Msa1015060:intron 25.0%
!! ATTTATCCTCTAGGAATATT+TGG + chr7_1:26179664-26179683 Msa1015060:intron 25.0%
!!! AAAACTCTAAGACTTTGTTA+AGG + chr7_1:26179771-26179790 Msa1015060:intron 25.0%
!!! AAACTCTAAGACTTTGTTAA+GGG + chr7_1:26179772-26179791 Msa1015060:intron 25.0%
! GAACTTAAAATATGCATTGA+AGG + chr7_1:26179926-26179945 Msa1015060:intron 25.0%
!!! TAAGAGTATTAAAGTGATAC+GGG - chr7_1:26179990-26180009 None:intergenic 25.0%
! ACATAACAGTATTACATGAT+AGG + chr7_1:26180204-26180223 Msa1015060:intron 25.0%
!! TAACAAAAGGCTTTTATTCT+AGG - chr7_1:26180244-26180263 None:intergenic 25.0%
!! AAAGTTCTGATCATAACAAA+AGG - chr7_1:26180257-26180276 None:intergenic 25.0%
!! TTTTGTAATTTCTAAACCAG+TGG + chr7_1:26180354-26180373 Msa1015060:intron 25.0%
!!! AGTTTTTTGGTGATAATGTT+GGG + chr7_1:26180849-26180868 Msa1015060:CDS 25.0%
! TCCATAATAATATGCAAATG+CGG - chr7_1:26181203-26181222 None:intergenic 25.0%
!!! TTAAGGGTGCTGAATTTTTT+GGG - chr7_1:26175143-26175162 None:intergenic 30.0%
!!! ATTAAGGGTGCTGAATTTTT+TGG - chr7_1:26175144-26175163 None:intergenic 30.0%
TTGTTATGTTGTGTATGTGA+AGG + chr7_1:26175213-26175232 Msa1015060:five_prime_UTR 30.0%
GAATAACGAACGAAGAAAAT+GGG + chr7_1:26175235-26175254 Msa1015060:exon 30.0%
AATGATACAAAGTTCACCAT+TGG - chr7_1:26175341-26175360 None:intergenic 30.0%
GAGAAAGTGAGATAATTCAA+TGG + chr7_1:26175738-26175757 Msa1015060:intron 30.0%
ATAATTCAATGGAATCGTGT+CGG + chr7_1:26175749-26175768 Msa1015060:intron 30.0%
! TAGAATGGTGGTTTTTATGT+TGG + chr7_1:26175923-26175942 Msa1015060:intron 30.0%
! AGAATGGTGGTTTTTATGTT+GGG + chr7_1:26175924-26175943 Msa1015060:intron 30.0%
AAAACATAAAGGAGCTAACT+TGG - chr7_1:26176171-26176190 None:intergenic 30.0%
GTAAAAATAGTAGTTAGGGA+AGG + chr7_1:26176423-26176442 Msa1015060:intron 30.0%
! GAGAGATGAAATTTGAGATT+TGG + chr7_1:26176515-26176534 Msa1015060:intron 30.0%
! ATGAAATTTGAGATTTGGAG+TGG + chr7_1:26176520-26176539 Msa1015060:intron 30.0%
!!! AGTAGTTTGGTGGTTTTTTT+AGG - chr7_1:26176591-26176610 None:intergenic 30.0%
AAAAAACCACCAAACTACTA+TGG + chr7_1:26176592-26176611 Msa1015060:intron 30.0%
ATCAGGAATCAAAATTCAAG+GGG - chr7_1:26176684-26176703 None:intergenic 30.0%
AAATATCCTTTGCTTAATGC+AGG - chr7_1:26176859-26176878 None:intergenic 30.0%
! TCGAATTGAATTTTGCTCTT+TGG + chr7_1:26177019-26177038 Msa1015060:intron 30.0%
ACAAGTCAATGAAGTTAAGA+TGG - chr7_1:26177053-26177072 None:intergenic 30.0%
GACAAGCTATATTACTTAGT+TGG + chr7_1:26177089-26177108 Msa1015060:intron 30.0%
CAAGCTATATTACTTAGTTG+GGG + chr7_1:26177091-26177110 Msa1015060:intron 30.0%
AAGCTATATTACTTAGTTGG+GGG + chr7_1:26177092-26177111 Msa1015060:intron 30.0%
! GGGTAATTTTGTATGTTGTT+GGG + chr7_1:26177113-26177132 Msa1015060:intron 30.0%
! GGTAATTTTGTATGTTGTTG+GGG + chr7_1:26177114-26177133 Msa1015060:intron 30.0%
! CTCTTGATATTTGGTTGTTT+TGG + chr7_1:26177165-26177184 Msa1015060:intron 30.0%
TCATTATCAATTAATCACCC+TGG - chr7_1:26177230-26177249 None:intergenic 30.0%
AAAGATTTAACTGGTAGCTT+AGG + chr7_1:26177266-26177285 Msa1015060:intron 30.0%
CTTAGGATTGTAGTTGAATT+AGG + chr7_1:26177283-26177302 Msa1015060:intron 30.0%
!! CTATTTTAGAGACAATAAGG+AGG - chr7_1:26177369-26177388 None:intergenic 30.0%
!!! TGGCTGTTTTATTTGTTATC+TGG + chr7_1:26177619-26177638 Msa1015060:intron 30.0%
!! TCATGTATCAAGTATTGAAC+CGG - chr7_1:26177652-26177671 None:intergenic 30.0%
ATGATCCTATTTAGATTCTG+TGG + chr7_1:26177668-26177687 Msa1015060:intron 30.0%
ATTTCCGATTGAAACATCAT+TGG + chr7_1:26177707-26177726 Msa1015060:intron 30.0%
CTTAATCCCTTAGATAACTA+CGG + chr7_1:26177810-26177829 Msa1015060:intron 30.0%
TTTCATGCGTAGTTTATTTC+AGG + chr7_1:26178054-26178073 Msa1015060:intron 30.0%
! TGATTTTTGTTCATCCCAAT+TGG + chr7_1:26178206-26178225 Msa1015060:intron 30.0%
TAATATTCATGTATGCTTCC+AGG + chr7_1:26178232-26178251 Msa1015060:intron 30.0%
CAAGTTATTGAGAAGAGTTT+GGG + chr7_1:26178400-26178419 Msa1015060:intron 30.0%
AAGTTATTGAGAAGAGTTTG+GGG + chr7_1:26178401-26178420 Msa1015060:intron 30.0%
!!! GCAATTGTTATTTCCTTTTC+AGG + chr7_1:26178638-26178657 Msa1015060:intron 30.0%
AAACACTATTAACAACAACC+GGG + chr7_1:26178711-26178730 Msa1015060:CDS 30.0%
! ATAAACTGATTCTTGAAAGC+AGG - chr7_1:26178813-26178832 None:intergenic 30.0%
GTCCTTATTAACATAATACG+TGG + chr7_1:26179029-26179048 Msa1015060:intron 30.0%
TCCCACGTATTATGTTAATA+AGG - chr7_1:26179034-26179053 None:intergenic 30.0%
!! CTTTGAAGCTTGAAGAATTT+GGG + chr7_1:26179149-26179168 Msa1015060:CDS 30.0%
! TTTGAAGCTTGAAGAATTTG+GGG + chr7_1:26179150-26179169 Msa1015060:CDS 30.0%
AAGAGGAGTAAATTTCGTTA+AGG + chr7_1:26179574-26179593 Msa1015060:CDS 30.0%
AGAGGAGTAAATTTCGTTAA+GGG + chr7_1:26179575-26179594 Msa1015060:CDS 30.0%
!! TCATTTGATTTTGACGACAA+CGG + chr7_1:26179611-26179630 Msa1015060:CDS 30.0%
TTGTTGGAAATTTATCCTCT+AGG + chr7_1:26179655-26179674 Msa1015060:intron 30.0%
TAGGAATATTTGGTCGTATA+AGG + chr7_1:26179674-26179693 Msa1015060:intron 30.0%
TGTACCATAATAATGAGCAT+TGG + chr7_1:26179714-26179733 Msa1015060:intron 30.0%
GTTACCAATGCTCATTATTA+TGG - chr7_1:26179721-26179740 None:intergenic 30.0%
! ATAGCTTGATAACTAGACAA+AGG + chr7_1:26179748-26179767 Msa1015060:intron 30.0%
!! AACTCTAAGACTTTGTTAAG+GGG + chr7_1:26179773-26179792 Msa1015060:intron 30.0%
AGAAAAAAAACCTCCATACA+AGG - chr7_1:26179880-26179899 None:intergenic 30.0%
!!! GGTTTTTTTTCTCTCTTCAT+TGG + chr7_1:26179888-26179907 Msa1015060:intron 30.0%
!!! GCATATTTTAAGTTCTACCA+GGG - chr7_1:26179921-26179940 None:intergenic 30.0%
!!! TGCATATTTTAAGTTCTACC+AGG - chr7_1:26179922-26179941 None:intergenic 30.0%
CTTAAAATATGCATTGAAGG+AGG + chr7_1:26179929-26179948 Msa1015060:intron 30.0%
! TTAGACTTTGTTTAGGAGTT+AGG - chr7_1:26180122-26180141 None:intergenic 30.0%
! GTTTCTCTTAGACTTTGTTT+AGG - chr7_1:26180129-26180148 None:intergenic 30.0%
TGAAAAGACTTTCACCTTAA+TGG + chr7_1:26180152-26180171 Msa1015060:intron 30.0%
! AAAAGGCTTTTATTCTAGGT+GGG - chr7_1:26180240-26180259 None:intergenic 30.0%
! TTATGATCAGAACTTTTCAG+TGG + chr7_1:26180261-26180280 Msa1015060:intron 30.0%
ATTTCTAAACCAGTGGATAA+TGG + chr7_1:26180361-26180380 Msa1015060:intron 30.0%
!!! CTTTAGTTGATTTGTTTTGC+AGG + chr7_1:26180481-26180500 Msa1015060:intron 30.0%
ACAGCTGTTAATCTTAAAAC+CGG + chr7_1:26180506-26180525 Msa1015060:CDS 30.0%
AAAGGTGGAATCAAAGTAAA+TGG + chr7_1:26180614-26180633 Msa1015060:CDS 30.0%
!!! CAGTTTTTTGGTGATAATGT+TGG + chr7_1:26180848-26180867 Msa1015060:CDS 30.0%
!!! GTTTTTTGGTGATAATGTTG+GGG + chr7_1:26180850-26180869 Msa1015060:CDS 30.0%
TGGTCTTTCCAAAAGTAAAA+CGG - chr7_1:26181131-26181150 None:intergenic 30.0%
AGAATTGTAATCCAGTGAAT+TGG - chr7_1:26181330-26181349 None:intergenic 30.0%
GGAATAACGAACGAAGAAAA+TGG + chr7_1:26175234-26175253 Msa1015060:exon 35.0%
!! GCTCTTGAATTTGTTAAACG+TGG + chr7_1:26175310-26175329 Msa1015060:CDS 35.0%
CTGGTATAAGCTGTGAATAA+CGG + chr7_1:26175473-26175492 Msa1015060:intron 35.0%
! CTAAAGAGAATAAGGCATCA+AGG + chr7_1:26175620-26175639 Msa1015060:intron 35.0%
!! GTGTTACGGTGTTATTATCA+GGG - chr7_1:26175669-26175688 None:intergenic 35.0%
!! TGTGTTACGGTGTTATTATC+AGG - chr7_1:26175670-26175689 None:intergenic 35.0%
GATAATAACACCGTAACACA+TGG + chr7_1:26175670-26175689 Msa1015060:intron 35.0%
!! CCTTACAAGCAAGTTTTGTA+AGG - chr7_1:26175960-26175979 None:intergenic 35.0%
! CCTTACAAAACTTGCTTGTA+AGG + chr7_1:26175957-26175976 Msa1015060:intron 35.0%
GTGTGAGACATGTGATTATT+GGG - chr7_1:26176051-26176070 None:intergenic 35.0%
AATAATCACATGTCTCACAC+CGG + chr7_1:26176051-26176070 Msa1015060:intron 35.0%
TTGTGTTCAGAGTTAGGTTT+GGG - chr7_1:26176221-26176240 None:intergenic 35.0%
! TTACTTTATGGCTCTGTGAT+TGG + chr7_1:26176375-26176394 Msa1015060:intron 35.0%
AACAGTTTGCCATAGTAGTT+TGG - chr7_1:26176604-26176623 None:intergenic 35.0%
TTCCTGATTACAACACTGAT+TGG + chr7_1:26176696-26176715 Msa1015060:intron 35.0%
ATCCAATCAGTGTTGTAATC+AGG - chr7_1:26176701-26176720 None:intergenic 35.0%
CTTAATGCAGGTCTTTCATA+AGG - chr7_1:26176847-26176866 None:intergenic 35.0%
AAAGGATATTTGCTTCCAGA+AGG + chr7_1:26176868-26176887 Msa1015060:CDS 35.0%
CAAAATAACCAGTTGTGGAA+TGG - chr7_1:26176900-26176919 None:intergenic 35.0%
!!! AACTGGTTATTTTGAGTGGT+TGG + chr7_1:26176906-26176925 Msa1015060:intron 35.0%
AGCTATATTACTTAGTTGGG+GGG + chr7_1:26177093-26177112 Msa1015060:intron 35.0%
! GGGGTAATTTTGTATGTTGT+TGG + chr7_1:26177112-26177131 Msa1015060:intron 35.0%
!!! ATTTGGTTGTTTTGGCTCTT+TGG + chr7_1:26177173-26177192 Msa1015060:intron 35.0%
!!! TTTGGTTGTTTTGGCTCTTT+GGG + chr7_1:26177174-26177193 Msa1015060:intron 35.0%
!! GGGAGTGTTATTTATTGATG+AGG + chr7_1:26177197-26177216 Msa1015060:intron 35.0%
TATTGATGAGGAAGTAAACC+AGG + chr7_1:26177209-26177228 Msa1015060:intron 35.0%
ATTGATGAGGAAGTAAACCA+GGG + chr7_1:26177210-26177229 Msa1015060:intron 35.0%
AGGATTGTAGTTGAATTAGG+AGG + chr7_1:26177286-26177305 Msa1015060:intron 35.0%
AGACAATAAGGAGGAATGAA+CGG - chr7_1:26177360-26177379 None:intergenic 35.0%
CCATGTTCTCTATACCATTT+GGG - chr7_1:26177498-26177517 None:intergenic 35.0%
ACCATGTTCTCTATACCATT+TGG - chr7_1:26177499-26177518 None:intergenic 35.0%
! TTTGTTATCTGGCTTAGATC+CGG + chr7_1:26177630-26177649 Msa1015060:intron 35.0%
TCTAACACTGAATTACTCCT+CGG - chr7_1:26177943-26177962 None:intergenic 35.0%
GTAAATATAGGCAATCCTCT+TGG + chr7_1:26178303-26178322 Msa1015060:intron 35.0%
CTAACTACTAACTAACCAAG+AGG - chr7_1:26178321-26178340 None:intergenic 35.0%
! CTCTTGGTTAGTTAGTAGTT+AGG + chr7_1:26178319-26178338 Msa1015060:intron 35.0%
! TTGGTTAGTTAGTAGTTAGG+TGG + chr7_1:26178322-26178341 Msa1015060:intron 35.0%
! TGGTTAGTTAGTAGTTAGGT+GGG + chr7_1:26178323-26178342 Msa1015060:intron 35.0%
AGAGAAATGTAGACAAGAAG+AGG + chr7_1:26178359-26178378 Msa1015060:intron 35.0%
GCAAGTTATTGAGAAGAGTT+TGG + chr7_1:26178399-26178418 Msa1015060:intron 35.0%
GATGAAAATTGCTACAAACC+CGG - chr7_1:26178516-26178535 None:intergenic 35.0%
AACTAACTCAACTCCTGAAA+AGG - chr7_1:26178654-26178673 None:intergenic 35.0%
AACACTATTAACAACAACCG+GGG + chr7_1:26178712-26178731 Msa1015060:CDS 35.0%
TTTGTAACTTATGGTTTCCC+CGG - chr7_1:26178732-26178751 None:intergenic 35.0%
GATATCATGGAAACTACCAA+AGG - chr7_1:26178893-26178912 None:intergenic 35.0%
GAACGTTACAAGAGATATCA+TGG - chr7_1:26178906-26178925 None:intergenic 35.0%
GTGTCAATATGATGTTCCTA+CGG - chr7_1:26178995-26179014 None:intergenic 35.0%
!! GCTTTGAAGCTTGAAGAATT+TGG + chr7_1:26179148-26179167 Msa1015060:CDS 35.0%
TTATCCATAAGAGCAACAAG+CGG - chr7_1:26179447-26179466 None:intergenic 35.0%
AAACAACCTCAAAGACTGAT+GGG + chr7_1:26179468-26179487 Msa1015060:intron 35.0%
AAAATACCCATCAGTCTTTG+AGG - chr7_1:26179477-26179496 None:intergenic 35.0%
! ATAGTAGCTTGCAATCTTTG+GGG - chr7_1:26179537-26179556 None:intergenic 35.0%
! CATAGTAGCTTGCAATCTTT+GGG - chr7_1:26179538-26179557 None:intergenic 35.0%
! TCATAGTAGCTTGCAATCTT+TGG - chr7_1:26179539-26179558 None:intergenic 35.0%
ATACGACCAAATATTCCTAG+AGG - chr7_1:26179673-26179692 None:intergenic 35.0%
TATAAGGAGAAGACCAATAG+AGG + chr7_1:26179690-26179709 Msa1015060:intron 35.0%
TATTATGGTACAGCCTCTAT+TGG - chr7_1:26179706-26179725 None:intergenic 35.0%
TAAGACTTTGTTAAGGGGTT+TGG + chr7_1:26179778-26179797 Msa1015060:intron 35.0%
!!! AGGGTTTTGAGGATAAATGA+AGG + chr7_1:26179816-26179835 Msa1015060:intron 35.0%
!!! GTTTTGAGGATAAATGAAGG+AGG + chr7_1:26179819-26179838 Msa1015060:intron 35.0%
AGGATAAATGAAGGAGGAAA+GGG + chr7_1:26179825-26179844 Msa1015060:intron 35.0%
AAAAAACCTCCATACAAGGT+GGG - chr7_1:26179876-26179895 None:intergenic 35.0%
AAAAAAACCTCCATACAAGG+TGG - chr7_1:26179877-26179896 None:intergenic 35.0%
CAGTATTACATGATAGGTGT+TGG + chr7_1:26180210-26180229 Msa1015060:intron 35.0%
! AAAGGCTTTTATTCTAGGTG+GGG - chr7_1:26180239-26180258 None:intergenic 35.0%
! CAAAAGGCTTTTATTCTAGG+TGG - chr7_1:26180241-26180260 None:intergenic 35.0%
! TCAGAACTTTTCAGTGGTAT+CGG + chr7_1:26180267-26180286 Msa1015060:intron 35.0%
! CCAGGAAATTTTACTTCCAA+GGG - chr7_1:26180399-26180418 None:intergenic 35.0%
! ACCAGGAAATTTTACTTCCA+AGG - chr7_1:26180400-26180419 None:intergenic 35.0%
GTTCATGATAACCAACCTTA+TGG + chr7_1:26180418-26180437 Msa1015060:intron 35.0%
TTATCAAAGGAATGATGCTG+AGG - chr7_1:26180448-26180467 None:intergenic 35.0%
AACAAAGATATCTGTGGACA+TGG + chr7_1:26180529-26180548 Msa1015060:CDS 35.0%
ATTGGAATACGACCAAATAC+AGG + chr7_1:26180563-26180582 Msa1015060:CDS 35.0%
GTTTGAAGGTCAACTTACTT+TGG + chr7_1:26180589-26180608 Msa1015060:CDS 35.0%
ATTTCACCAAATGCTTTGAC+TGG - chr7_1:26180695-26180714 None:intergenic 35.0%
!!! TGTTTTTTCCGGTTCCATTA+TGG - chr7_1:26180774-26180793 None:intergenic 35.0%
! ATAATGGAACCGGAAAAAAC+AGG + chr7_1:26180773-26180792 Msa1015060:CDS 35.0%
!!! TCAAATTCGCCTGTTTTTTC+CGG - chr7_1:26180785-26180804 None:intergenic 35.0%
!! AAGACTCTGGAGTAGAAAAA+AGG - chr7_1:26180815-26180834 None:intergenic 35.0%
! TAGCACATTTGGAGCATATT+GGG + chr7_1:26180907-26180926 Msa1015060:CDS 35.0%
TGGAAAGACCATTATATGCT+TGG + chr7_1:26181140-26181159 Msa1015060:CDS 35.0%
GCCGCATTTGCATATTATTA+TGG + chr7_1:26181199-26181218 Msa1015060:CDS 35.0%
TTGTATCCTATCCAATTCAC+TGG + chr7_1:26181316-26181335 Msa1015060:three_prime_UTR 35.0%
TGTAATCCAGTGAATTGGAT+AGG - chr7_1:26181325-26181344 None:intergenic 35.0%
!! GTTTTGCTATGAACTCTTGT+GGG - chr7_1:26181432-26181451 None:intergenic 35.0%
!! TGTTTTGCTATGAACTCTTG+TGG - chr7_1:26181433-26181452 None:intergenic 35.0%
TTCGTTTACGTGATTCTTGG+TGG + chr7_1:26175265-26175284 Msa1015060:CDS 40.0%
GTTAAACGTGGTGTTTCCAA+TGG + chr7_1:26175322-26175341 Msa1015060:CDS 40.0%
!! TGAATAACGGACACAGACAT+CGG + chr7_1:26175486-26175505 Msa1015060:intron 40.0%
! ACATTGTCACTTCTCATCGA+AGG - chr7_1:26175592-26175611 None:intergenic 40.0%
GCATAGACACTCATCACATT+AGG - chr7_1:26175810-26175829 None:intergenic 40.0%
GATGAGTGTCTATGCTTGTT+AGG + chr7_1:26175815-26175834 Msa1015060:intron 40.0%
TATACATGCACCAAGTCCAA+TGG - chr7_1:26175905-26175924 None:intergenic 40.0%
!! GACTTGGTGCATGTATAGAA+TGG + chr7_1:26175908-26175927 Msa1015060:intron 40.0%
TTGGTGCATGTATAGAATGG+TGG + chr7_1:26175911-26175930 Msa1015060:intron 40.0%
GGTGTGAGACATGTGATTAT+TGG - chr7_1:26176052-26176071 None:intergenic 40.0%
! GCATTCGATATGAAGTGTCA+AGG + chr7_1:26176095-26176114 Msa1015060:intron 40.0%
TATGTCCTGGGTTGTAAGAT+TGG + chr7_1:26176134-26176153 Msa1015060:intron 40.0%
ATTTGCCAATCTTACAACCC+AGG - chr7_1:26176142-26176161 None:intergenic 40.0%
GTTGTGTTCAGAGTTAGGTT+TGG - chr7_1:26176222-26176241 None:intergenic 40.0%
ACCTAACTCTGAACACAACA+CGG + chr7_1:26176223-26176242 Msa1015060:intron 40.0%
! TTATGGCTCTGTGATTGGAT+TGG + chr7_1:26176380-26176399 Msa1015060:intron 40.0%
AGTTTGCCATAGTAGTTTGG+TGG - chr7_1:26176601-26176620 None:intergenic 40.0%
GCATAAACACTTCAGATCAG+AGG - chr7_1:26176749-26176768 None:intergenic 40.0%
GAAAGACCTGCATTAAGCAA+AGG + chr7_1:26176850-26176869 Msa1015060:CDS 40.0%
CCACTCAAAATAACCAGTTG+TGG - chr7_1:26176905-26176924 None:intergenic 40.0%
!!! CCACAACTGGTTATTTTGAG+TGG + chr7_1:26176902-26176921 Msa1015060:intron 40.0%
AATGTGGGGCTCTTGATATT+TGG + chr7_1:26177156-26177175 Msa1015060:intron 40.0%
!!! TTGGTTGTTTTGGCTCTTTG+GGG + chr7_1:26177175-26177194 Msa1015060:intron 40.0%
ATAAGGAGGAATGAACGGAA+AGG - chr7_1:26177355-26177374 None:intergenic 40.0%
CCAACACATGTATGAAAGGA+TGG - chr7_1:26177453-26177472 None:intergenic 40.0%
CCATCCTTTCATACATGTGT+TGG + chr7_1:26177450-26177469 Msa1015060:CDS 40.0%
CCCAAATGGTATAGAGAACA+TGG + chr7_1:26177495-26177514 Msa1015060:CDS 40.0%
GTGGACCACAGAATCTAAAT+AGG - chr7_1:26177676-26177695 None:intergenic 40.0%
AATCCCTTAGATAACTACGG+TGG + chr7_1:26177813-26177832 Msa1015060:intron 40.0%
CAACCACCGTAGTTATCTAA+GGG - chr7_1:26177819-26177838 None:intergenic 40.0%
CAGCTTCTGCCATTAAATGT+CGG - chr7_1:26177979-26177998 None:intergenic 40.0%
CATGCGTAGTTTATTTCAGG+TGG + chr7_1:26178057-26178076 Msa1015060:intron 40.0%
! GGTTAGTTAGTAGTTAGGTG+GGG + chr7_1:26178324-26178343 Msa1015060:intron 40.0%
GTTAGTTAGTAGTTAGGTGG+GGG + chr7_1:26178325-26178344 Msa1015060:intron 40.0%
TCAAACTCGGAGAATTTCGA+GGG - chr7_1:26178450-26178469 None:intergenic 40.0%
CCAAGTATACAGCTCAAACT+CGG - chr7_1:26178463-26178482 None:intergenic 40.0%
CGAGTTTGAGCTGTATACTT+GGG + chr7_1:26178461-26178480 Msa1015060:intron 40.0%
! TCAGGAGTTGAGTTAGTTCT+TGG + chr7_1:26178656-26178675 Msa1015060:intron 40.0%
! GTTGAGTTAGTTCTTGGAAC+TGG + chr7_1:26178662-26178681 Msa1015060:CDS 40.0%
AAAGTTCTCATTGTTGCCAC+TGG + chr7_1:26178749-26178768 Msa1015060:CDS 40.0%
ACATGAAACTATTAGGCCGT+AGG + chr7_1:26178976-26178995 Msa1015060:intron 40.0%
TTGTGTGCAATGTCAAGTGT+AGG + chr7_1:26179126-26179145 Msa1015060:intron 40.0%
! CTTGAAGAATTTGGGGTGAA+TGG + chr7_1:26179157-26179176 Msa1015060:CDS 40.0%
GGGATATAGCAGATGCAAAT+AGG + chr7_1:26179209-26179228 Msa1015060:CDS 40.0%
! AGTGCTATTCAATCTTCTCC+TGG + chr7_1:26179238-26179257 Msa1015060:CDS 40.0%
CTATTCAATCTTCTCCTGGA+GGG + chr7_1:26179242-26179261 Msa1015060:CDS 40.0%
GCTTACTGCAATGTTCTTCT+GGG - chr7_1:26179354-26179373 None:intergenic 40.0%
TGCTTACTGCAATGTTCTTC+TGG - chr7_1:26179355-26179374 None:intergenic 40.0%
CAAACAACCTCAAAGACTGA+TGG + chr7_1:26179467-26179486 Msa1015060:intron 40.0%
!! TGATTTTGACGACAACGGAA+AGG + chr7_1:26179616-26179635 Msa1015060:CDS 40.0%
ACTTTGTTAAGGGGTTTGGA+GGG + chr7_1:26179782-26179801 Msa1015060:intron 40.0%
GAGGATAAATGAAGGAGGAA+AGG + chr7_1:26179824-26179843 Msa1015060:intron 40.0%
TAAATGAAGGAGGAAAGGGA+AGG + chr7_1:26179829-26179848 Msa1015060:intron 40.0%
AAATGAAGGAGGAAAGGGAA+GGG + chr7_1:26179830-26179849 Msa1015060:intron 40.0%
! ACTTTGTTTAGGAGTTAGGC+TGG - chr7_1:26180118-26180137 None:intergenic 40.0%
TGTAAGAAGCCATTATCCAC+TGG - chr7_1:26180373-26180392 None:intergenic 40.0%
ATGGCTTCTTACATATCCCT+TGG + chr7_1:26180380-26180399 Msa1015060:intron 40.0%
CCCTTGGAAGTAAAATTTCC+TGG + chr7_1:26180396-26180415 Msa1015060:intron 40.0%
! AAGGTTGGTTATCATGAACC+AGG - chr7_1:26180417-26180436 None:intergenic 40.0%
TGATGCTGAGGATATCCATA+AGG - chr7_1:26180436-26180455 None:intergenic 40.0%
AACCGGAACAAAGATATCTG+TGG + chr7_1:26180523-26180542 Msa1015060:CDS 40.0%
GTCCACAGATATCTTTGTTC+CGG - chr7_1:26180528-26180547 None:intergenic 40.0%
CCTTCAAACAGACCTGTATT+TGG - chr7_1:26180578-26180597 None:intergenic 40.0%
CCAAATACAGGTCTGTTTGA+AGG + chr7_1:26180575-26180594 Msa1015060:CDS 40.0%
! GGTCAACTTACTTTGGAGAA+AGG + chr7_1:26180596-26180615 Msa1015060:CDS 40.0%
! CAACTTACTTTGGAGAAAGG+TGG + chr7_1:26180599-26180618 Msa1015060:CDS 40.0%
AACAGCTCAGTCTATGCTAT+TGG + chr7_1:26180653-26180672 Msa1015060:CDS 40.0%
! GCATTTCCAGTCAAAGCATT+TGG + chr7_1:26180686-26180705 Msa1015060:CDS 40.0%
!! ACATGCTGTTTCTGCCATAA+TGG + chr7_1:26180757-26180776 Msa1015060:CDS 40.0%
! TGTTTCTGCCATAATGGAAC+CGG + chr7_1:26180763-26180782 Msa1015060:CDS 40.0%
!!! ACTCTGTCTTGGCAGTTTTT+TGG + chr7_1:26180836-26180855 Msa1015060:CDS 40.0%
GTTGGGGAAGTTGTCTATTA+TGG + chr7_1:26180866-26180885 Msa1015060:CDS 40.0%
! GTAGCACATTTGGAGCATAT+TGG + chr7_1:26180906-26180925 Msa1015060:CDS 40.0%
TGGAGCATATTGGGTTAACA+AGG + chr7_1:26180916-26180935 Msa1015060:CDS 40.0%
GGAGCATATTGGGTTAACAA+GGG + chr7_1:26180917-26180936 Msa1015060:CDS 40.0%
GTTAACAAGGGTCATGTTGT+TGG + chr7_1:26180929-26180948 Msa1015060:CDS 40.0%
! CTTCTTTAGTTCCACCTTCA+AGG - chr7_1:26180961-26180980 None:intergenic 40.0%
AATTGAAGACTTGGCTGAGT+TGG + chr7_1:26181021-26181040 Msa1015060:CDS 40.0%
TACAGTTAGTCAGAAACCAG+TGG + chr7_1:26181069-26181088 Msa1015060:CDS 40.0%
! CAGCACTTCCGTTTTACTTT+TGG + chr7_1:26181120-26181139 Msa1015060:CDS 40.0%
GTAGCATGCCAAGCATATAA+TGG - chr7_1:26181151-26181170 None:intergenic 40.0%
! AGATGGTGAAACTTCTGAGA+AGG + chr7_1:26181235-26181254 Msa1015060:exon 40.0%
TGGGAATAGCTTCTGAATGA+TGG - chr7_1:26181413-26181432 None:intergenic 40.0%
CGAGTGGTTTCGTATAAGGA+AGG - chr7_1:26175118-26175137 None:intergenic 45.0%
!!! CTGAATTTTTTGGGAGCGAG+TGG - chr7_1:26175134-26175153 None:intergenic 45.0%
GCGTTCGTTTACGTGATTCT+TGG + chr7_1:26175262-26175281 Msa1015060:CDS 45.0%
GTTTACGTGATTCTTGGTGG+TGG + chr7_1:26175268-26175287 Msa1015060:CDS 45.0%
TGATGCTCTTAAGTCAGAGC+TGG + chr7_1:26175454-26175473 Msa1015060:intron 45.0%
! CTTCTCATCGAAGGCATATC+CGG - chr7_1:26175583-26175602 None:intergenic 45.0%
TCAAGGACAAACCTAGACTC+TGG + chr7_1:26175637-26175656 Msa1015060:intron 45.0%
TGTCCAGTGTCCATGTGTTA+CGG - chr7_1:26175683-26175702 None:intergenic 45.0%
TCCGTGTTGTGTTCAGAGTT+AGG - chr7_1:26176227-26176246 None:intergenic 45.0%
TGATTGAATGCAGGGTCTGA+GGG + chr7_1:26176291-26176310 Msa1015060:intron 45.0%
! GTGATGACGACTAGCTAGTT+AGG + chr7_1:26176487-26176506 Msa1015060:intron 45.0%
TGTAACCACATGTCAGACAC+TGG + chr7_1:26176720-26176739 Msa1015060:intron 45.0%
GTGGAATGGTTCATACCTTC+TGG - chr7_1:26176886-26176905 None:intergenic 45.0%
GGTATGAACCATTCCACAAC+TGG + chr7_1:26176889-26176908 Msa1015060:intron 45.0%
!!! TGGTTGTTTTGGCTCTTTGG+GGG + chr7_1:26177176-26177195 Msa1015060:intron 45.0%
TGCGCCAACACATGTATGAA+AGG - chr7_1:26177457-26177476 None:intergenic 45.0%
! TACATGTGTTGGCGCAAATG+AGG + chr7_1:26177461-26177480 Msa1015060:CDS 45.0%
AGGAAAGGCTAACTCCCAAA+TGG + chr7_1:26177481-26177500 Msa1015060:CDS 45.0%
CCAAAGGGCGAAAATAGAGT+AGG - chr7_1:26177575-26177594 None:intergenic 45.0%
! CCTACTCTATTTTCGCCCTT+TGG + chr7_1:26177572-26177591 Msa1015060:intron 45.0%
CCAACCACCGTAGTTATCTA+AGG - chr7_1:26177820-26177839 None:intergenic 45.0%
CCTTAGATAACTACGGTGGT+TGG + chr7_1:26177817-26177836 Msa1015060:intron 45.0%
ATCTCTAGTTGCATCCAGTG+AGG + chr7_1:26177909-26177928 Msa1015060:intron 45.0%
TTAGTAGTTAGGTGGGGGTT+GGG + chr7_1:26178330-26178349 Msa1015060:intron 45.0%
!! AGACAAGAAGAGGTGTTGAG+AGG + chr7_1:26178369-26178388 Msa1015060:intron 45.0%
!! GACAAGAAGAGGTGTTGAGA+GGG + chr7_1:26178370-26178389 Msa1015060:intron 45.0%
CTCAAACTCGGAGAATTTCG+AGG - chr7_1:26178451-26178470 None:intergenic 45.0%
CCGAGTTTGAGCTGTATACT+TGG + chr7_1:26178460-26178479 Msa1015060:intron 45.0%
! TTTTAATACCCGAGCACCAG+TGG - chr7_1:26178768-26178787 None:intergenic 45.0%
GCTATTCAATCTTCTCCTGG+AGG + chr7_1:26179241-26179260 Msa1015060:CDS 45.0%
AATGCCATTGTCATTGGTGG+TGG + chr7_1:26179265-26179284 Msa1015060:CDS 45.0%
GTATCCACCACCAATGACAA+TGG - chr7_1:26179272-26179291 None:intergenic 45.0%
!! GTCATTGGTGGTGGATACAT+TGG + chr7_1:26179274-26179293 Msa1015060:CDS 45.0%
ATACATTGGCATGGAGTGTG+CGG + chr7_1:26179288-26179307 Msa1015060:CDS 45.0%
! CAAACCGCTTGTTGCTCTTA+TGG + chr7_1:26179440-26179459 Msa1015060:intron 45.0%
GACTTTGTTAAGGGGTTTGG+AGG + chr7_1:26179781-26179800 Msa1015060:intron 45.0%
CTTTGTTAAGGGGTTTGGAG+GGG + chr7_1:26179783-26179802 Msa1015060:intron 45.0%
GAGTAATCACCCACCTTGTA+TGG + chr7_1:26179864-26179883 Msa1015060:intron 45.0%
TAATCACCCACCTTGTATGG+AGG + chr7_1:26179867-26179886 Msa1015060:intron 45.0%
TCTTCATTGGACGAAAACCC+TGG + chr7_1:26179901-26179920 Msa1015060:intron 45.0%
GGAGAGGATAGGAAGGAAAT+TGG - chr7_1:26180088-26180107 None:intergenic 45.0%
AAAGTAGGGAGAGGATAGGA+AGG - chr7_1:26180095-26180114 None:intergenic 45.0%
AGGAGTTAGGCTGGAAAGTA+GGG - chr7_1:26180109-26180128 None:intergenic 45.0%
TAGGAGTTAGGCTGGAAAGT+AGG - chr7_1:26180110-26180129 None:intergenic 45.0%
!! GAACTTTTCAGTGGTATCGG+TGG + chr7_1:26180270-26180289 Msa1015060:intron 45.0%
GCTGAGGATATCCATAAGGT+TGG - chr7_1:26180432-26180451 None:intergenic 45.0%
ATCTGTGGACATGGTTGTAG+TGG + chr7_1:26180538-26180557 Msa1015060:CDS 45.0%
TCTGTGGACATGGTTGTAGT+GGG + chr7_1:26180539-26180558 Msa1015060:CDS 45.0%
! GACATGGTTGTAGTGGGAAT+TGG + chr7_1:26180545-26180564 Msa1015060:CDS 45.0%
! AAGCATTTGGTGAAATGCGC+AGG + chr7_1:26180699-26180718 Msa1015060:CDS 45.0%
GTTGTTGGAGCTTTCCTTGA+AGG + chr7_1:26180944-26180963 Msa1015060:CDS 45.0%
AGAGTATGAAGCCATAGCCA+AGG + chr7_1:26180979-26180998 Msa1015060:CDS 45.0%
TAACCTAGTGACCTTGGCTA+TGG - chr7_1:26180993-26181012 None:intergenic 45.0%
TAGCCAAGGTCACTAGGTTA+AGG + chr7_1:26180993-26181012 Msa1015060:CDS 45.0%
AAGGCCAGCAATTGAAGACT+TGG + chr7_1:26181012-26181031 Msa1015060:CDS 45.0%
TCAGCCAAGTCTTCAATTGC+TGG - chr7_1:26181019-26181038 None:intergenic 45.0%
CTCAGAAGTTTCACCATCTG+CGG - chr7_1:26181234-26181253 None:intergenic 45.0%
!! CTGAGAAGGTTACCGATTTG+TGG + chr7_1:26181249-26181268 Msa1015060:three_prime_UTR 45.0%
!! AGGTTACCGATTTGTGGTCA+AGG + chr7_1:26181255-26181274 Msa1015060:three_prime_UTR 45.0%
!! GGTTACCGATTTGTGGTCAA+GGG + chr7_1:26181256-26181275 Msa1015060:three_prime_UTR 45.0%
TGAAGCCCTTGACCACAAAT+CGG - chr7_1:26181264-26181283 None:intergenic 45.0%
GGAGCGAGTGGTTTCGTATA+AGG - chr7_1:26175122-26175141 None:intergenic 50.0%
TCGGATACAACACTGACACG+TGG + chr7_1:26175505-26175524 Msa1015060:intron 50.0%
CAACACTGACACGTGGATAC+CGG + chr7_1:26175512-26175531 Msa1015060:intron 50.0%
GTGTATGGTGAGTGAGACAC+CGG + chr7_1:26175561-26175580 Msa1015060:intron 50.0%
!! CAGGGTTTTGTCCAGAGTCT+AGG - chr7_1:26175651-26175670 None:intergenic 50.0%
ACACCGTAACACATGGACAC+TGG + chr7_1:26175677-26175696 Msa1015060:intron 50.0%
! CAATGGAATCGTGTCGGTGT+CGG + chr7_1:26175755-26175774 Msa1015060:intron 50.0%
ACACCAGACGTATCTGATCC+TGG + chr7_1:26175778-26175797 Msa1015060:intron 50.0%
CACCAGACGTATCTGATCCT+GGG + chr7_1:26175779-26175798 Msa1015060:intron 50.0%
GCACCAAGTCCAATGGTGTT+GGG - chr7_1:26175898-26175917 None:intergenic 50.0%
TGCACCAAGTCCAATGGTGT+TGG - chr7_1:26175899-26175918 None:intergenic 50.0%
GTCCAATGTCAGACATGTGC+CGG - chr7_1:26176073-26176092 None:intergenic 50.0%
GTGATTGAATGCAGGGTCTG+AGG + chr7_1:26176290-26176309 Msa1015060:intron 50.0%
GATTGAATGCAGGGTCTGAG+GGG + chr7_1:26176292-26176311 Msa1015060:intron 50.0%
!!! GGTTGTTTTGGCTCTTTGGG+GGG + chr7_1:26177177-26177196 Msa1015060:intron 50.0%
TGTAACCTACAGCTGCTGCT+CGG + chr7_1:26177424-26177443 Msa1015060:intron 50.0%
! GTGTTGGCGCAAATGAGGAA+AGG + chr7_1:26177466-26177485 Msa1015060:CDS 50.0%
TCTAGTTGCATCCAGTGAGG+TGG + chr7_1:26177912-26177931 Msa1015060:intron 50.0%
GTTAGTAGTTAGGTGGGGGT+TGG + chr7_1:26178329-26178348 Msa1015060:intron 50.0%
!! AAGAAGAGGTGTTGAGAGGG+AGG + chr7_1:26178373-26178392 Msa1015060:intron 50.0%
! GAGAAGAGTTTGGGGCTTTG+TGG + chr7_1:26178409-26178428 Msa1015060:intron 50.0%
TCATTGTTGCCACTGGTGCT+CGG + chr7_1:26178756-26178775 Msa1015060:CDS 50.0%
ATGACAATGGCATTCCCTCC+AGG - chr7_1:26179259-26179278 None:intergenic 50.0%
GGAGGGAATGCCATTGTCAT+TGG + chr7_1:26179259-26179278 Msa1015060:CDS 50.0%
GGGAATGCCATTGTCATTGG+TGG + chr7_1:26179262-26179281 Msa1015060:CDS 50.0%
!! TGGTGGTGGATACATTGGCA+TGG + chr7_1:26179279-26179298 Msa1015060:CDS 50.0%
TTAAGGGGTTTGGAGGGGAA+CGG + chr7_1:26179788-26179807 Msa1015060:intron 50.0%
! GAACGGAGAAGAGGGTTTTG+AGG + chr7_1:26179805-26179824 Msa1015060:intron 50.0%
CTGGAAAGTAGGGAGAGGAT+AGG - chr7_1:26180099-26180118 None:intergenic 50.0%
TTAGGCTGGAAAGTAGGGAG+AGG - chr7_1:26180104-26180123 None:intergenic 50.0%
CCAAGACAGAGTGAAGACTC+TGG - chr7_1:26180828-26180847 None:intergenic 50.0%
CCAGAGTCTTCACTCTGTCT+TGG + chr7_1:26180825-26180844 Msa1015060:CDS 50.0%
TGCTCCAAATGTGCTACCTG+CGG - chr7_1:26180903-26180922 None:intergenic 50.0%
GTTGGAGCTTTCCTTGAAGG+TGG + chr7_1:26180947-26180966 Msa1015060:CDS 50.0%
AAGCCATAGCCAAGGTCACT+AGG + chr7_1:26180987-26181006 Msa1015060:CDS 50.0%
! TGGCCTTAACCTAGTGACCT+TGG - chr7_1:26180999-26181018 None:intergenic 50.0%
! AAGACTTGGCTGAGTTGGAG+AGG + chr7_1:26181026-26181045 Msa1015060:CDS 50.0%
! TGAGTTGGAGAGGCAAGGTT+TGG + chr7_1:26181036-26181055 Msa1015060:CDS 50.0%
CTGCTAACCTCAATTGGTGG+TGG - chr7_1:26181100-26181119 None:intergenic 50.0%
CTGCTGCTAACCTCAATTGG+TGG - chr7_1:26181103-26181122 None:intergenic 50.0%
! GTGCTGCTGCTAACCTCAAT+TGG - chr7_1:26181106-26181125 None:intergenic 50.0%
TATGCTTGGCATGCTACAGC+TGG + chr7_1:26181154-26181173 Msa1015060:CDS 50.0%
ATGCTTGGCATGCTACAGCT+GGG + chr7_1:26181155-26181174 Msa1015060:CDS 50.0%
!! ATGGAAAAAAGCGCCGCAGA+TGG + chr7_1:26181218-26181237 Msa1015060:CDS 50.0%
!! CTTGGTGGTGGTGTATCAGC+TGG + chr7_1:26175280-26175299 Msa1015060:CDS 55.0%
GTCCCAGGATCAGATACGTC+TGG - chr7_1:26175784-26175803 None:intergenic 55.0%
CATCACATTAGGCGTGTCCC+AGG - chr7_1:26175799-26175818 None:intergenic 55.0%
! TGGGCGTGAGGAGGTGTATT+GGG - chr7_1:26175879-26175898 None:intergenic 55.0%
! TTGGGCGTGAGGAGGTGTAT+TGG - chr7_1:26175880-26175899 None:intergenic 55.0%
ACGCCCAACACCATTGGACT+TGG + chr7_1:26175892-26175911 Msa1015060:intron 55.0%
CACCGGCACATGTCTGACAT+TGG + chr7_1:26176068-26176087 Msa1015060:intron 55.0%
GCGATGTGTGACAGAAGCTG+TGG + chr7_1:26176460-26176479 Msa1015060:intron 55.0%
GGTGTCCAGTGTCTGACATG+TGG - chr7_1:26176728-26176747 None:intergenic 55.0%
! GAGTTTGGGGCTTTGTGGCA+TGG + chr7_1:26178414-26178433 Msa1015060:intron 55.0%
! TTTGGGGCTTTGTGGCATGG+AGG + chr7_1:26178417-26178436 Msa1015060:intron 55.0%
CATTGTTGCCACTGGTGCTC+GGG + chr7_1:26178757-26178776 Msa1015060:CDS 55.0%
CATGGAGTGTGCGGCATCTT+TGG + chr7_1:26179297-26179316 Msa1015060:CDS 55.0%
TTTGGAGGGGAACGGAGAAG+AGG + chr7_1:26179796-26179815 Msa1015060:intron 55.0%
TTGGAGGGGAACGGAGAAGA+GGG + chr7_1:26179797-26179816 Msa1015060:intron 55.0%
TATGGAGATCTCTCAGCCGC+AGG + chr7_1:26180884-26180903 Msa1015060:CDS 55.0%
TCAGCCGCAGGTAGCACATT+TGG + chr7_1:26180896-26180915 Msa1015060:CDS 55.0%
! TTGGCTGAGTTGGAGAGGCA+AGG + chr7_1:26181031-26181050 Msa1015060:CDS 55.0%
!! ATTGGTGGTGGTGATGCCAC+TGG - chr7_1:26181088-26181107 None:intergenic 55.0%
GGCATCACCACCACCAATTG+AGG + chr7_1:26181090-26181109 Msa1015060:CDS 55.0%
TGCTTGGCATGCTACAGCTG+GGG + chr7_1:26181156-26181175 Msa1015060:CDS 55.0%
! GGGCGTGAGGAGGTGTATTG+GGG - chr7_1:26175878-26175897 None:intergenic 60.0%
! CAATGGTGTTGGGCGTGAGG+AGG - chr7_1:26175888-26175907 None:intergenic 60.0%
CTCCTCACGCCCAACACCAT+TGG + chr7_1:26175886-26175905 Msa1015060:intron 60.0%
! GTCCAATGGTGTTGGGCGTG+AGG - chr7_1:26175891-26175910 None:intergenic 60.0%
TGAGGGGCAGGCAGGTGTTA+TGG + chr7_1:26176308-26176327 Msa1015060:intron 60.0%
CCTCGGCTAAACCACCTCAC+TGG - chr7_1:26177926-26177945 None:intergenic 60.0%
CCAGTGAGGTGGTTTAGCCG+AGG + chr7_1:26177923-26177942 Msa1015060:intron 60.0%
GAATGCAGGGTCTGAGGGGC+AGG + chr7_1:26176296-26176315 Msa1015060:intron 65.0%
GGAAGCCGAGCAGCAGCTGT+AGG - chr7_1:26177432-26177451 None:intergenic 65.0%
GCAGGGTCTGAGGGGCAGGC+AGG + chr7_1:26176300-26176319 Msa1015060:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 26175090 26181541 26175090 ID=Msa1015060;Name=Msa1015060
chr7_1 mRNA 26175090 26181541 26175090 ID=Msa1015060-mRNA-1;Parent=Msa1015060;Name=Msa1015060-mRNA-1;_AED=0.01;_eAED=0.01;_QI=163|1|1|1|1|1|7|298|483
chr7_1 exon 26175090 26175372 26175090 ID=Msa1015060-mRNA-1:exon:5726;Parent=Msa1015060-mRNA-1
chr7_1 exon 26176838 26176889 26176838 ID=Msa1015060-mRNA-1:exon:5727;Parent=Msa1015060-mRNA-1
chr7_1 exon 26177436 26177516 26177436 ID=Msa1015060-mRNA-1:exon:5728;Parent=Msa1015060-mRNA-1
chr7_1 exon 26178660 26178778 26178660 ID=Msa1015060-mRNA-1:exon:5729;Parent=Msa1015060-mRNA-1
chr7_1 exon 26179148 26179367 26179148 ID=Msa1015060-mRNA-1:exon:5730;Parent=Msa1015060-mRNA-1
chr7_1 exon 26179519 26179637 26179519 ID=Msa1015060-mRNA-1:exon:5731;Parent=Msa1015060-mRNA-1
chr7_1 exon 26180503 26181541 26180503 ID=Msa1015060-mRNA-1:exon:5732;Parent=Msa1015060-mRNA-1
chr7_1 five_prime_UTR 26175090 26175252 26175090 ID=Msa1015060-mRNA-1:five_prime_utr;Parent=Msa1015060-mRNA-1
chr7_1 CDS 26175253 26175372 26175253 ID=Msa1015060-mRNA-1:cds;Parent=Msa1015060-mRNA-1
chr7_1 CDS 26176838 26176889 26176838 ID=Msa1015060-mRNA-1:cds;Parent=Msa1015060-mRNA-1
chr7_1 CDS 26177436 26177516 26177436 ID=Msa1015060-mRNA-1:cds;Parent=Msa1015060-mRNA-1
chr7_1 CDS 26178660 26178778 26178660 ID=Msa1015060-mRNA-1:cds;Parent=Msa1015060-mRNA-1
chr7_1 CDS 26179148 26179367 26179148 ID=Msa1015060-mRNA-1:cds;Parent=Msa1015060-mRNA-1
chr7_1 CDS 26179519 26179637 26179519 ID=Msa1015060-mRNA-1:cds;Parent=Msa1015060-mRNA-1
chr7_1 CDS 26180503 26181243 26180503 ID=Msa1015060-mRNA-1:cds;Parent=Msa1015060-mRNA-1
chr7_1 three_prime_UTR 26181244 26181541 26181244 ID=Msa1015060-mRNA-1:three_prime_utr;Parent=Msa1015060-mRNA-1
Gene Sequence

>Msa1015060

ATGGGAAGAGCGTTCGTTTACGTGATTCTTGGTGGTGGTGTATCAGCTGGTTATGCTGCTCTTGAATTTGTTAAACGTGGTGTTTCCAATGGTGAACTTTGTATCATTTCTGATGAATCAGTAGCTCCTTATGAAAGACCTGCATTAAGCAAAGGATATTTGCTTCCAGAAGCTGCTGCTCGGCTTCCATCCTTTCATACATGTGTTGGCGCAAATGAGGAAAGGCTAACTCCCAAATGGTATAGAGAACATGGAGTTGAGTTAGTTCTTGGAACTGGAGTTAAGTCTGCTGATGTGAAACGTAAAACACTATTAACAACAACCGGGGAAACCATAAGTTACAAAGTTCTCATTGTTGCCACTGGTGCTCGGGCTTTGAAGCTTGAAGAATTTGGGGTGAATGGATCAGATGCAGAAAATGTATGTTACTTACGGGATATAGCAGATGCAAATAGGCTTGTGAGTGCTATTCAATCTTCTCCTGGAGGGAATGCCATTGTCATTGGTGGTGGATACATTGGCATGGAGTGTGCGGCATCTTTGGTGATCAATAAAATCAGTGTAACAATGGTCTTCCCAGAAGAACATTGCATGGCTCGATTGCTGACCCCAAAGATTGCAAGCTACTATGAAGAATATTATAAATCAAGAGGAGTAAATTTCGTTAAGGGAACTGTTTTATCATCATTTGATTTTGACGACAACGGAAAGGTTACAGCTGTTAATCTTAAAACCGGAACAAAGATATCTGTGGACATGGTTGTAGTGGGAATTGGAATACGACCAAATACAGGTCTGTTTGAAGGTCAACTTACTTTGGAGAAAGGTGGAATCAAAGTAAATGGAATGTTTCAATCAAGCAACAGCTCAGTCTATGCTATTGGAGATGTTGCAGCATTTCCAGTCAAAGCATTTGGTGAAATGCGCAGGCTTGAGCATGTTGATTCAGCAAGAAAATCTGCAAAACATGCTGTTTCTGCCATAATGGAACCGGAAAAAACAGGCGAATTTGATTACATTCCTTTTTTCTACTCCAGAGTCTTCACTCTGTCTTGGCAGTTTTTTGGTGATAATGTTGGGGAAGTTGTCTATTATGGAGATCTCTCAGCCGCAGGTAGCACATTTGGAGCATATTGGGTTAACAAGGGTCATGTTGTTGGAGCTTTCCTTGAAGGTGGAACTAAAGAAGAGTATGAAGCCATAGCCAAGGTCACTAGGTTAAGGCCAGCAATTGAAGACTTGGCTGAGTTGGAGAGGCAAGGTTTGGCGTTTGCAGTTACAGTTAGTCAGAAACCAGTGGCATCACCACCACCAATTGAGGTTAGCAGCAGCACTTCCGTTTTACTTTTGGAAAGACCATTATATGCTTGGCATGCTACAGCTGGGGTCGTTCTTGCTGCATCAATAGCCGCATTTGCATATTATTATGGAAAAAAGCGCCGCAGATGGTGA

Protein sequence

>Msa1015060

MGRAFVYVILGGGVSAGYAALEFVKRGVSNGELCIISDESVAPYERPALSKGYLLPEAAARLPSFHTCVGANEERLTPKWYREHGVELVLGTGVKSADVKRKTLLTTTGETISYKVLIVATGARALKLEEFGVNGSDAENVCYLRDIADANRLVSAIQSSPGGNAIVIGGGYIGMECAASLVINKISVTMVFPEEHCMARLLTPKIASYYEEYYKSRGVNFVKGTVLSSFDFDDNGKVTAVNLKTGTKISVDMVVVGIGIRPNTGLFEGQLTLEKGGIKVNGMFQSSNSSVYAIGDVAAFPVKAFGEMRRLEHVDSARKSAKHAVSAIMEPEKTGEFDYIPFFYSRVFTLSWQFFGDNVGEVVYYGDLSAAGSTFGAYWVNKGHVVGAFLEGGTKEEYEAIAKVTRLRPAIEDLAELERQGLAFAVTVSQKPVASPPPIEVSSSTSVLLLERPLYAWHATAGVVLAASIAAFAYYYGKKRRRW*