AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0143080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143080 MtrunA17_Chr2g0286181 83.670 643 69 5 126 758 1 617 0.0 936
Msa0143080 MtrunA17_Chr1g0155741 39.310 290 149 5 314 577 131 419 1.75e-51 187
Msa0143080 MtrunA17_Chr1g0186011 38.095 273 126 7 360 594 221 488 4.18e-38 149
Msa0143080 MtrunA17_Chr8g0358201 35.000 140 60 5 438 548 53 190 5.05e-13 72.0
Msa0143080 MtrunA17_Chr3g0129261 39.560 91 54 1 435 525 65 154 1.16e-12 70.5
Msa0143080 MtrunA17_Chr2g0292511 30.986 142 77 3 437 558 27 167 2.23e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143080 AT5G18570.1 65.257 544 141 7 236 758 165 681 0.0 649
Msa0143080 AT1G07615.1 39.516 248 112 7 380 594 225 467 1.42e-37 147
Msa0143080 AT4G39520.1 28.302 212 129 7 437 642 68 262 7.92e-13 71.2
Msa0143080 AT1G17470.1 33.333 114 70 2 437 545 65 177 1.65e-11 67.4
Msa0143080 AT1G17470.2 33.333 114 70 2 437 545 65 177 1.65e-11 67.4
Msa0143080 AT1G72660.2 33.333 114 70 2 437 545 65 177 2.16e-11 67.0
Msa0143080 AT1G72660.3 33.333 114 70 2 437 545 65 177 2.16e-11 67.0
Msa0143080 AT1G72660.1 33.333 114 70 2 437 545 65 177 2.16e-11 67.0
Msa0143080 AT1G30580.1 32.394 142 75 4 437 558 27 167 8.17e-11 65.1

Find 231 sgRNAs with CRISPR-Local

Find 543 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCCTTCTTGAGTCCTTAT+TGG 0.126508 1_4:+1986507 Msa0143080:CDS
ATCTTACATACATTATTTAT+TGG 0.128384 1_4:+1993368 Msa0143080:three_prime_UTR
GGAAGTAATGCCACTCTAAT+TGG 0.191369 1_4:+1992808 Msa0143080:exon
CACAAGCCTCAAGGACATTT+TGG 0.211110 1_4:-1992295 None:intergenic
TGATGAAGAATTGGGGTTTA+TGG 0.218508 1_4:+1988726 Msa0143080:CDS
TTGTTATAAGCAACTATAAA+TGG 0.224726 1_4:-1991287 None:intergenic
TGGTAGGGAGGAGGTGATTT+TGG 0.235029 1_4:+1989128 Msa0143080:CDS
TCTAACTTTGTCTTTATTGA+TGG 0.256378 1_4:+1986545 Msa0143080:CDS
TTGAAGAAGGTGAAGAATTC+TGG 0.257218 1_4:+1988758 Msa0143080:CDS
TATAGTTGCTTATAACAAAA+TGG 0.257241 1_4:+1991292 Msa0143080:CDS
TACAACTTTGCTTCCCAATC+TGG 0.258739 1_4:+1990349 Msa0143080:CDS
TTCCAGAAGCATACGAAAAC+TGG 0.259566 1_4:+1991318 Msa0143080:CDS
TGTCCACAGATTCAATTAAA+TGG 0.293170 1_4:+1992778 Msa0143080:CDS
GAAGGAGCACACCGAGGTTT+TGG 0.293578 1_4:+1990431 Msa0143080:CDS
ATGATAGCAGTTCAAATGTT+TGG 0.295196 1_4:+1991675 Msa0143080:CDS
GAAATTTCCACCTCCATTCA+TGG 0.297081 1_4:+1992214 Msa0143080:CDS
ATGTACTGCAACTACGAAAT+AGG 0.304579 1_4:+1992847 Msa0143080:three_prime_UTR
GAGTGGCATTACTTCCATTC+AGG 0.312704 1_4:-1992801 None:intergenic
GATTCGGAGAGTTTGATTTC+AGG 0.313597 1_4:-1988592 None:intergenic
TGAAATATGAACTAGTTTCT+TGG 0.316345 1_4:+1986249 Msa0143080:CDS
TGAATTCGTTGTTACCGTTT+AGG 0.321891 1_4:+1988989 Msa0143080:CDS
TGAATGGAGGTGGAAATTTC+AGG 0.332899 1_4:-1992211 None:intergenic
AGTGTACTCTTCCCTGCATT+TGG 0.333641 1_4:-1990278 None:intergenic
GGTCCATCCGGTGGGGATGG+AGG 0.337189 1_4:+1988928 Msa0143080:CDS
GTCTGAAGATGATGAAGAAT+TGG 0.341137 1_4:+1988717 Msa0143080:CDS
TGCCACCAGGGACGGTGATT+AGG 0.343834 1_4:+1989100 Msa0143080:CDS
TTGACAGCGCTCATACAAAA+AGG 0.344719 1_4:-1991380 None:intergenic
ATGGTAGTGGCAGACCTTCC+AGG 0.354141 1_4:+1990401 Msa0143080:CDS
CTTTGACTACGATTCAACTA+TGG 0.367402 1_4:+1990382 Msa0143080:CDS
GCCACCAGGGACGGTGATTA+GGG 0.368808 1_4:+1989101 Msa0143080:CDS
GGAGGAGGAAGGTGAGAAAG+TGG 0.373453 1_4:-1988571 None:intergenic
TATGCGCTGCTTATGAGCTT+TGG 0.374290 1_4:+1991426 Msa0143080:CDS
AATGGCTTCTCAGCAAGTTC+AGG 0.382943 1_4:-1991269 None:intergenic
CGTTGTTACCGTTTAGGAAT+GGG 0.384513 1_4:+1988995 Msa0143080:CDS
TGGACCTGGGGTTGAGGTCA+TGG 0.384558 1_4:+1986322 Msa0143080:CDS
TCCGGTGGGGATGGAGGGAG+AGG 0.384757 1_4:+1988934 Msa0143080:CDS
GTTGCAGATGTTGGTATAGT+TGG 0.385284 1_4:+1990251 Msa0143080:CDS
TTTGGAGCACTTGTTGGACC+TGG 0.386371 1_4:+1986308 Msa0143080:CDS
GGAACGGAAGTATGGCATTC+AGG 0.387965 1_4:+1988881 Msa0143080:CDS
CCTACACTCGTCTCCCTCTC+AGG 0.390295 1_4:+1988535 Msa0143080:CDS
TTTCGTAGTTGCAGTACATA+TGG 0.391667 1_4:-1992843 None:intergenic
CATCATCGTTATCGAGTTTG+TGG 0.399071 1_4:-1988636 None:intergenic
GCGGAGAGGAGTGGCGGTTC+CGG 0.400789 1_4:-1988498 None:intergenic
TGTATCAGATGGAGATGATA+TGG 0.401049 1_4:+1992715 Msa0143080:intron
GTTTGGAGCGTAGTTGGGTC+TGG 0.405218 1_4:+1991692 Msa0143080:CDS
GCTATTTGGAACTTACTGTT+TGG 0.406298 1_4:+1985990 Msa0143080:CDS
GCGAAAATCTTCGCGAAAGC+CGG 0.416186 1_4:+1988850 Msa0143080:CDS
TACATTATTTATTGGCTTGA+AGG 0.416941 1_4:+1993376 Msa0143080:three_prime_UTR
ATTCAATTAAATGGCCTGAA+TGG 0.419308 1_4:+1992787 Msa0143080:CDS
CATGACTCCTCAAACAAATC+TGG 0.420155 1_4:+1992738 Msa0143080:CDS
TTTGTATGAGCGCTGTCAAA+AGG 0.420667 1_4:+1991384 Msa0143080:CDS
AGACGGAGGGAACGGAAGTA+TGG 0.420800 1_4:+1988873 Msa0143080:CDS
TCAAATGTTTGGAGCGTAGT+TGG 0.422783 1_4:+1991686 Msa0143080:CDS
TTGTGGAGCAATTGGTGAAT+TGG 0.422988 1_4:-1988619 None:intergenic
TATCGAGTTTGTGGAGCAAT+TGG 0.426319 1_4:-1988627 None:intergenic
TCCGACATTCATCTTTAACT+TGG 0.426558 1_4:-1986574 None:intergenic
GACCTTCCAGGTCTTCTTGA+AGG 0.429947 1_4:+1990413 Msa0143080:CDS
CGAAAACTGGGAATCCTTCA+AGG 0.430197 1_4:+1991331 Msa0143080:CDS
TCAATAAAGACAAAGTTAGA+AGG 0.431206 1_4:-1986542 None:intergenic
GGAGAGTTGTCATTCCAATA+AGG 0.431804 1_4:-1986521 None:intergenic
GGTGGGGATGGAGGGAGAGG+TGG 0.432284 1_4:+1988937 Msa0143080:CDS
AATCATTCATTTCAACAAGA+TGG 0.434826 1_4:-1986361 None:intergenic
TCTGAAGATGATGAAGAATT+GGG 0.434922 1_4:+1988718 Msa0143080:CDS
AAGGGATAATTTGCCACCTC+TGG 0.436401 1_4:-1990326 None:intergenic
AACCTACCGCCAATGTCATC+TGG 0.439031 1_4:-1991730 None:intergenic
TTTCAGATACATGTCGTTGA+TGG 0.441011 1_4:+1991185 Msa0143080:intron
TTCCTCAGATCTGGTGTTGT+AGG 0.441163 1_4:-1986429 None:intergenic
GAGAAATACGTACCGTTTGG+AGG 0.441360 1_4:+1988907 Msa0143080:CDS
ACTTGTTGGACCTGGGGTTG+AGG 0.446031 1_4:+1986316 Msa0143080:CDS
GTCCATCCGGTGGGGATGGA+GGG 0.450001 1_4:+1988929 Msa0143080:CDS
TTGGAGCACTTGTTGGACCT+GGG 0.450765 1_4:+1986309 Msa0143080:CDS
TAGGGAGGCTGGTAGGGAGG+AGG 0.455313 1_4:+1989119 Msa0143080:CDS
CAAATGTTTGGAGCGTAGTT+GGG 0.455810 1_4:+1991687 Msa0143080:CDS
AGAATTGGGGTTTATGGATG+AGG 0.456087 1_4:+1988732 Msa0143080:CDS
AGTGAAGGAGAAAGGATTGC+CGG 0.456941 1_4:+1988804 Msa0143080:CDS
AAAGGAAACAACGCCCAGAT+TGG 0.457445 1_4:-1990363 None:intergenic
TATTTCAGATGGACGAGATA+TGG 0.457580 1_4:+1991580 Msa0143080:intron
ACATTATTTATTGGCTTGAA+GGG 0.458517 1_4:+1993377 Msa0143080:three_prime_UTR
CAGAAGGCGTTGTTGTTGCC+AGG 0.459645 1_4:+1989168 Msa0143080:CDS
TCACCATTCTCAGCAATCTT+CGG 0.460210 1_4:-1989243 None:intergenic
CGGGAGAAATACGTACCGTT+TGG 0.460923 1_4:+1988904 Msa0143080:CDS
GAAGTAATGCCACTCTAATT+GGG 0.465787 1_4:+1992809 Msa0143080:exon
CACTGAAAGGTGTTCTGCAC+TGG 0.465901 1_4:+1990478 Msa0143080:CDS
GCAGTCAACTTCCTCAGATC+TGG 0.466163 1_4:-1986438 None:intergenic
AAGGAAAAGTTGCAATCTCA+TGG 0.466487 1_4:+1991350 Msa0143080:CDS
AAGGAAACAACGCCCAGATT+GGG 0.467360 1_4:-1990362 None:intergenic
GAAGAAGAAGTGAAGGAGAA+AGG 0.468046 1_4:+1988796 Msa0143080:CDS
TGATGCACCAGATTTGTTTG+AGG 0.468296 1_4:-1992745 None:intergenic
ATAGTTGGTGCTCCAAATGC+AGG 0.468647 1_4:+1990266 Msa0143080:CDS
TTGGGAAGCAAAGTTGTAAA+GGG 0.469159 1_4:-1990344 None:intergenic
AGTGTAGGTGGTGGCGTCGC+CGG 0.469582 1_4:-1988520 None:intergenic
ACAACTTTGCTTCCCAATCT+GGG 0.469782 1_4:+1990350 Msa0143080:CDS
CGGTGATTAGGGAGGCTGGT+AGG 0.470355 1_4:+1989112 Msa0143080:CDS
ATGGATGAGGAGATTGAAGA+AGG 0.471799 1_4:+1988745 Msa0143080:CDS
AATCACTCACCAGGGACAGC+TGG 0.474588 1_4:-1986078 None:intergenic
GTTTGATTTCAGGAGGAGGA+AGG 0.476185 1_4:-1988582 None:intergenic
TTGGTGAATTGGTGTTGATT+CGG 0.476681 1_4:-1988608 None:intergenic
GGTGATTAGGGAGGCTGGTA+GGG 0.477415 1_4:+1989113 Msa0143080:CDS
AACTGAAGAAGAAGAAGTGA+AGG 0.481173 1_4:+1988789 Msa0143080:CDS
GGAGGTCCATCCGGTGGGGA+TGG 0.481836 1_4:+1988925 Msa0143080:CDS
AAATGAATCCCATTCCTAAA+CGG 0.482116 1_4:-1989003 None:intergenic
GCACCTTGCATCATGCCATC+AGG 0.482514 1_4:-1993253 None:intergenic
GCCTCCCTAATCACCGTCCC+TGG 0.483881 1_4:-1989105 None:intergenic
CTTAAGCTGGTTGCAGATGT+TGG 0.485261 1_4:+1990242 Msa0143080:CDS
CAGGATGCAGATTGGTGCTA+AGG 0.485724 1_4:+1989056 Msa0143080:CDS
TCTCGTGAAACGTGGCGTAA+AGG 0.486465 1_4:+1992331 Msa0143080:CDS
ACCTCTCCCTCCATCCCCAC+CGG 0.487820 1_4:-1988935 None:intergenic
TCGTTGTTACCGTTTAGGAA+TGG 0.488361 1_4:+1988994 Msa0143080:CDS
GATTAGGGAGGCTGGTAGGG+AGG 0.489143 1_4:+1989116 Msa0143080:CDS
TGGAACTTACTGTTTGGATG+AGG 0.491713 1_4:+1985996 Msa0143080:CDS
AACAACAACGCCTTCTGTCC+CGG 0.491853 1_4:-1989162 None:intergenic
AAAGCCGGAGACGGAGGGAA+CGG 0.496700 1_4:+1988865 Msa0143080:CDS
GAAGGCGACAAAGTGATTGT+TGG 0.502678 1_4:+1992353 Msa0143080:CDS
ATGGATAGTCTCATGGAAAC+CGG 0.504266 1_4:+1992233 Msa0143080:CDS
AGATCTGGTGTTGTAGGAAG+TGG 0.504607 1_4:-1986423 None:intergenic
ATTGGGAAGCAAAGTTGTAA+AGG 0.507169 1_4:-1990345 None:intergenic
CTCCCTCCATCCCCACCGGA+TGG 0.510309 1_4:-1988931 None:intergenic
TCCATTCATGGATAGTCTCA+TGG 0.512092 1_4:+1992226 Msa0143080:CDS
AGGATGCAGATTGGTGCTAA+GGG 0.513323 1_4:+1989057 Msa0143080:CDS
CGGGCAGGGAGGGGTTCACA+TGG 0.515275 1_4:+1989027 Msa0143080:CDS
GGAACTTACTGTTTGGATGA+GGG 0.518947 1_4:+1985997 Msa0143080:CDS
GCGTCGCCGGCGGAGAGGAG+TGG 0.520485 1_4:-1988507 None:intergenic
AGGCCATTTAATTGAATCTG+TGG 0.521022 1_4:-1992781 None:intergenic
GTACCGTTTGGAGGTCCATC+CGG 0.522710 1_4:+1988916 Msa0143080:CDS
ACTTCCGTTCCCTCCGTCTC+CGG 0.522717 1_4:-1988869 None:intergenic
TTGTTGCCAGGTGGAAGAGG+TGG 0.524896 1_4:+1989180 Msa0143080:CDS
CCAGGTGGAAGAGGTGGGAG+AGG 0.525237 1_4:+1989186 Msa0143080:CDS
GTACCTGTTAAAAGATTCAC+CGG 0.529115 1_4:-1992252 None:intergenic
GGGGTTCACATGGACAAGGC+AGG 0.529117 1_4:+1989037 Msa0143080:CDS
CGGAAGTATGGCATTCAGGC+GGG 0.531074 1_4:+1988885 Msa0143080:CDS
GCTCCGAAGATTGCTGAGAA+TGG 0.532975 1_4:+1989240 Msa0143080:CDS
GTTCATGTAGGAAGCAAGTT+CGG 0.534930 1_4:+1993141 Msa0143080:three_prime_UTR
AATTGCCTTGTCTTGTACAG+AGG 0.536042 1_4:-1986025 None:intergenic
GTTGGAGTTAGAACTTAAGC+TGG 0.538046 1_4:+1990229 Msa0143080:CDS
TTGTTGTTGCCAGGTGGAAG+AGG 0.541521 1_4:+1989177 Msa0143080:CDS
CTTTACCGTTATGCTTCTTG+AGG 0.544281 1_4:-1993209 None:intergenic
GAAGACAGGGAGGAATATGA+AGG 0.545361 1_4:+1991461 Msa0143080:CDS
GGGGATCATCCAGCTGTCCC+TGG 0.547956 1_4:+1986069 Msa0143080:CDS
AGGTGAAGAATTCTGGAGTG+AGG 0.548335 1_4:+1988765 Msa0143080:CDS
AGACTATCCATGAATGGAGG+TGG 0.549009 1_4:-1992221 None:intergenic
CCTCTCCCACCTCTTCCACC+TGG 0.549993 1_4:-1989186 None:intergenic
ATTCCAATAAGGACTCAAGA+AGG 0.550935 1_4:-1986510 None:intergenic
CGTTGATGGTTCATCACCAC+AGG 0.551266 1_4:+1991199 Msa0143080:CDS
CGTTTGGAGGTCCATCCGGT+GGG 0.552725 1_4:+1988920 Msa0143080:CDS
CTACGATTCAACTATGGTAG+TGG 0.558121 1_4:+1990388 Msa0143080:CDS
GTGGTTGTGAAGGTGCCACC+AGG 0.559086 1_4:+1989087 Msa0143080:CDS
GGGACGGTGATTAGGGAGGC+TGG 0.562217 1_4:+1989108 Msa0143080:CDS
TTGTATGAGCGCTGTCAAAA+GGG 0.563051 1_4:+1991385 Msa0143080:CDS
TTAGTCAAGATACAGTCGTA+AGG 0.564302 1_4:+1993339 Msa0143080:three_prime_UTR
GGACAAGGCAGGATGCAGAT+TGG 0.565589 1_4:+1989048 Msa0143080:CDS
TTCCAATAAGGACTCAAGAA+GGG 0.565686 1_4:-1986509 None:intergenic
GTAGGTGGTGGCGTCGCCGG+CGG 0.567740 1_4:-1988517 None:intergenic
AAAATGAGATGACATATATG+AGG 0.568855 1_4:+1993166 Msa0143080:three_prime_UTR
CCGTTTGGAGGTCCATCCGG+TGG 0.570745 1_4:+1988919 Msa0143080:CDS
CATAGTTGAATCGTAGTCAA+AGG 0.571566 1_4:-1990381 None:intergenic
CTGAAGATGATGAAGAATTG+GGG 0.573252 1_4:+1988719 Msa0143080:CDS
CAAAATGTCCTTGAGGCTTG+TGG 0.573547 1_4:+1992296 Msa0143080:CDS
CCTTGTCTTGTACAGAGGAA+AGG 0.573800 1_4:-1986020 None:intergenic
TCGGAGAGTTTGATTTCAGG+AGG 0.574521 1_4:-1988589 None:intergenic
TCAAAACACCGCATCACCGC+CGG 0.575828 1_4:-1988823 None:intergenic
TGGAGCACTTGTTGGACCTG+GGG 0.577174 1_4:+1986310 Msa0143080:CDS
AGCTGCCTCAAGAAGCATAA+CGG 0.578319 1_4:+1993204 Msa0143080:three_prime_UTR
CAGGTGGAAGAGGTGGGAGA+GGG 0.580361 1_4:+1989187 Msa0143080:CDS
CCACCGGATGGACCTCCAAA+CGG 0.580508 1_4:-1988919 None:intergenic
AAGGATTGCCGGCGGTGATG+CGG 0.581747 1_4:+1988815 Msa0143080:CDS
GGGGTATATGTCATTGTGCA+TGG 0.582524 1_4:-1986489 None:intergenic
TGTGCTCCTTCAAGAAGACC+TGG 0.583192 1_4:-1990419 None:intergenic
TCCAGAAGCATACGAAAACT+GGG 0.583546 1_4:+1991319 Msa0143080:CDS
GAGAGTTTGATTTCAGGAGG+AGG 0.583941 1_4:-1988586 None:intergenic
TCCATGAGACTATCCATGAA+TGG 0.584135 1_4:-1992227 None:intergenic
TGGTGGCGTCGCCGGCGGAG+AGG 0.584884 1_4:-1988512 None:intergenic
ATCTTCGCGAAAGCCGGAGA+CGG 0.585928 1_4:+1988856 Msa0143080:CDS
CGACAAAGTGATTGTTGGAG+AGG 0.586228 1_4:+1992358 Msa0143080:CDS
TCGCGAAAGCCGGAGACGGA+GGG 0.586944 1_4:+1988860 Msa0143080:CDS
AATTACACACTTGTTCCTGA+TGG 0.587412 1_4:+1993238 Msa0143080:three_prime_UTR
AGGAAAAGTTGCAATCTCAT+GGG 0.588616 1_4:+1991351 Msa0143080:CDS
GATGGTGTATCCGGGACAGA+AGG 0.588814 1_4:+1989152 Msa0143080:CDS
GATGCAGATTGGTGCTAAGG+GGG 0.591936 1_4:+1989059 Msa0143080:CDS
TTCGCGAAAGCCGGAGACGG+AGG 0.592060 1_4:+1988859 Msa0143080:CDS
TCCAATAAGGACTCAAGAAG+GGG 0.592873 1_4:-1986508 None:intergenic
CATGAATCATATTGCTCATG+CGG 0.596595 1_4:+1991607 Msa0143080:CDS
GTGAAACGTGGCGTAAAGGA+AGG 0.597774 1_4:+1992335 Msa0143080:CDS
CCTTTCCTCTGTACAAGACA+AGG 0.597833 1_4:+1986020 Msa0143080:CDS
CTACACTCGTCTCCCTCTCA+GGG 0.600984 1_4:+1988536 Msa0143080:CDS
ATTATGCTCTGCAGTGGGTG+AGG 0.602285 1_4:+1986393 Msa0143080:CDS
TTGAGAGCAGCAGTTCATGT+AGG 0.603893 1_4:+1993129 Msa0143080:intron
TCCAAGTTAAAGATGAATGT+CGG 0.605321 1_4:+1986573 Msa0143080:CDS
TGTGAAGGTGCCACCAGGGA+CGG 0.608030 1_4:+1989092 Msa0143080:CDS
GAAACCATGACCTCAACCCC+AGG 0.610124 1_4:-1986326 None:intergenic
ACGGAAGTATGGCATTCAGG+CGG 0.612451 1_4:+1988884 Msa0143080:CDS
CAACACCCACAAGTCCTCAC+CGG 0.612873 1_4:+1988479 Msa0143080:intron
TTTAAGTCTCTCGTGAAACG+TGG 0.617643 1_4:+1992323 Msa0143080:CDS
TCCCTAATCACCGTCCCTGG+TGG 0.618886 1_4:-1989102 None:intergenic
CCTGAGAGGGAGACGAGTGT+AGG 0.619759 1_4:-1988535 None:intergenic
TAAATACACCACAAGCCTCA+AGG 0.620582 1_4:-1992304 None:intergenic
GGGAGGGGTTCACATGGACA+AGG 0.621316 1_4:+1989033 Msa0143080:CDS
GTTCCTGATGGCATGATGCA+AGG 0.622424 1_4:+1993250 Msa0143080:three_prime_UTR
ATTGCTGAGAATGGTGAACA+AGG 0.627576 1_4:+1989249 Msa0143080:CDS
GAGAGGGAGACGAGTGTAGG+TGG 0.629633 1_4:-1988532 None:intergenic
AAGATTCCAAAATGTCCTTG+AGG 0.629860 1_4:+1992289 Msa0143080:CDS
AATTTCTGCGACACACTGAA+AGG 0.631516 1_4:+1990465 Msa0143080:CDS
GGATGCAGATTGGTGCTAAG+GGG 0.631737 1_4:+1989058 Msa0143080:CDS
TCGCCGGCGGAGAGGAGTGG+CGG 0.632323 1_4:-1988504 None:intergenic
TTCCTACAACACCAGATCTG+AGG 0.632688 1_4:+1986427 Msa0143080:CDS
GAACCGCCACTCCTCTCCGC+CGG 0.632897 1_4:+1988501 Msa0143080:CDS
AGGGAGACGAGTGTAGGTGG+TGG 0.634657 1_4:-1988529 None:intergenic
TAGTTGGTGCTCCAAATGCA+GGG 0.637534 1_4:+1990267 Msa0143080:CDS
AAGAGAAGTCTTCCCTGAGA+GGG 0.638307 1_4:-1988548 None:intergenic
ATGAGCGCTGTCAAAAGGGA+AGG 0.638324 1_4:+1991389 Msa0143080:CDS
GTTTGGAGGTCCATCCGGTG+GGG 0.638510 1_4:+1988921 Msa0143080:CDS
TTGTGAGCAGTTGAAGACCT+CGG 0.638534 1_4:-1993311 None:intergenic
ACCAGGGACGGTGATTAGGG+AGG 0.638899 1_4:+1989104 Msa0143080:CDS
CTCCTTCAAGAAGACCTGGA+AGG 0.639991 1_4:-1990415 None:intergenic
GTCCAGATGACATTGGCGGT+AGG 0.643457 1_4:+1991728 Msa0143080:CDS
TAGTGCTGCAAAGCCAGAGG+TGG 0.645616 1_4:+1990313 Msa0143080:CDS
GAGGAGTGGCGGTTCCGGTG+AGG 0.646720 1_4:-1988493 None:intergenic
TAGTCAAGATACAGTCGTAA+GGG 0.648354 1_4:+1993340 Msa0143080:three_prime_UTR
CTAGAAGCACCCAATTAGAG+TGG 0.650772 1_4:-1992818 None:intergenic
AAGGCGTTGTTGTTGCCAGG+TGG 0.650877 1_4:+1989171 Msa0143080:CDS
TGTTGCCAGGTGGAAGAGGT+GGG 0.652771 1_4:+1989181 Msa0143080:CDS
GAAGAGAAGTCTTCCCTGAG+AGG 0.656534 1_4:-1988549 None:intergenic
TATTAGTGCTGCAAAGCCAG+AGG 0.678097 1_4:+1990310 Msa0143080:CDS
GAGAGGTGGAAATGTGTACG+TGG 0.681715 1_4:+1988951 Msa0143080:CDS
CTTCTTGAAGGAGCACACCG+AGG 0.684238 1_4:+1990425 Msa0143080:CDS
ATGAGACTATCCATGAATGG+AGG 0.684788 1_4:-1992224 None:intergenic
ATATTGATTATGCTCTGCAG+TGG 0.691000 1_4:+1986387 Msa0143080:CDS
TATTGATTATGCTCTGCAGT+GGG 0.696578 1_4:+1986388 Msa0143080:CDS
CATGACCTAAACCAAAACCT+CGG 0.704819 1_4:-1990442 None:intergenic
TGGTTGTGAAGGTGCCACCA+GGG 0.718648 1_4:+1989088 Msa0143080:CDS
TCAAACTCAAGATCTGCCTG+TGG 0.718680 1_4:-1991215 None:intergenic
GAAGGAGAAAGGATTGCCGG+CGG 0.728649 1_4:+1988807 Msa0143080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTTTTGGAATATTAA+GGG + chr1_4:1987741-1987760 Msa0143080:intron 10.0%
!!! TTTTTAAATTTTGATTTGAA+GGG + chr1_4:1989494-1989513 Msa0143080:intron 10.0%
!!! TTGTTTTTTTTTTTTTGTTT+TGG + chr1_4:1989962-1989981 Msa0143080:intron 10.0%
!!! AGAAAATAAAAAAACTTGTT+TGG + chr1_4:1986712-1986731 Msa0143080:intron 15.0%
!! TTATCAAAGACAAATTAATA+TGG - chr1_4:1986987-1987006 None:intergenic 15.0%
!!! GATATTTTTTTGGAATATTA+AGG + chr1_4:1987740-1987759 Msa0143080:intron 15.0%
!! AAATGAAAAGACATTTAAAA+AGG + chr1_4:1988223-1988242 Msa0143080:intron 15.0%
!!! GTTTTTAAATTTTGATTTGA+AGG + chr1_4:1989493-1989512 Msa0143080:intron 15.0%
!!! AAACTTGATATTTTTTTTCA+TGG - chr1_4:1990130-1990149 None:intergenic 15.0%
!! TACATATCTATCTTATATTT+AGG + chr1_4:1990566-1990585 Msa0143080:intron 15.0%
!!! TTTAAAATTAGTCTTTACAT+TGG + chr1_4:1991161-1991180 Msa0143080:intron 15.0%
!!! TTAAAATTAGTCTTTACATT+GGG + chr1_4:1991162-1991181 Msa0143080:intron 15.0%
!!! GGTTCTTTTTTTTTTTTTTT+TGG - chr1_4:1992091-1992110 None:intergenic 15.0%
!! ATCATACCATTATTAAAATA+AGG - chr1_4:1992882-1992901 None:intergenic 15.0%
!!! TATTTTAATAATGGTATGAT+TGG + chr1_4:1992882-1992901 Msa0143080:intron 15.0%
!! ATCTTACATACATTATTTAT+TGG + chr1_4:1993368-1993387 Msa0143080:three_prime_UTR 15.0%
!!! TTTAAAATTCTATTAGCCAA+TGG - chr1_4:1986129-1986148 None:intergenic 20.0%
!! CAAAAATAGACTTATCTAAA+TGG - chr1_4:1986292-1986311 None:intergenic 20.0%
!!! CATTTAGATAAGTCTATTTT+TGG + chr1_4:1986290-1986309 Msa0143080:CDS 20.0%
!!! CTCATTTTTTGAGTTAATTT+AGG - chr1_4:1987145-1987164 None:intergenic 20.0%
!!! TATTCAATATTGACTTTCTA+AGG - chr1_4:1987247-1987266 None:intergenic 20.0%
!! TTGAATATACTACAAACAAA+AGG + chr1_4:1987260-1987279 Msa0143080:intron 20.0%
!! TAGATTAAGAAATGTTCATA+AGG - chr1_4:1987326-1987345 None:intergenic 20.0%
!!! TTGAAATAATCTCTTTTCAT+TGG + chr1_4:1987473-1987492 Msa0143080:intron 20.0%
!!! TTAGTTTTTCAAATGTTGTT+TGG + chr1_4:1987645-1987664 Msa0143080:intron 20.0%
!! AAAACACATAGTATATCTTA+TGG - chr1_4:1989309-1989328 None:intergenic 20.0%
!!! GAGAAATGATACTTTTTTTT+TGG + chr1_4:1989529-1989548 Msa0143080:intron 20.0%
!! CCAATCAAAAATACAAATAT+GGG - chr1_4:1989791-1989810 None:intergenic 20.0%
!! ACCAATCAAAAATACAAATA+TGG - chr1_4:1989792-1989811 None:intergenic 20.0%
!! ACTATCAAATATAATCTTAG+AGG - chr1_4:1989884-1989903 None:intergenic 20.0%
!! AAAAAAATCGTTTAAGAGAA+GGG - chr1_4:1990683-1990702 None:intergenic 20.0%
!! AAAAAAAATCGTTTAAGAGA+AGG - chr1_4:1990684-1990703 None:intergenic 20.0%
!! ACACTTGAAATATATAACTT+AGG + chr1_4:1990710-1990729 Msa0143080:intron 20.0%
!! CAAAAATAAAGGTAAGATAA+CGG - chr1_4:1990842-1990861 None:intergenic 20.0%
!! TATATCAATGTTTAAACCAA+TGG - chr1_4:1991005-1991024 None:intergenic 20.0%
!!! ATTTTAAACAGCAGATTTAA+GGG - chr1_4:1991149-1991168 None:intergenic 20.0%
!!! AATTTTAAACAGCAGATTTA+AGG - chr1_4:1991150-1991169 None:intergenic 20.0%
!! TTGTTATAAGCAACTATAAA+TGG - chr1_4:1991290-1991309 None:intergenic 20.0%
!! TATAGTTGCTTATAACAAAA+TGG + chr1_4:1991292-1991311 Msa0143080:CDS 20.0%
!! TTTACAGAAAAAGAATAATC+TGG - chr1_4:1991531-1991550 None:intergenic 20.0%
!! GAATAGCATGAAAAATATAA+AGG + chr1_4:1992117-1992136 Msa0143080:intron 20.0%
!!! AAATATCAATATTTTCGATC+AGG + chr1_4:1993078-1993097 Msa0143080:intron 20.0%
!!! AATATCAATATTTTCGATCA+GGG + chr1_4:1993079-1993098 Msa0143080:intron 20.0%
!!! ATGATATTGTGTTTTGTAAT+AGG + chr1_4:1993454-1993473 Msa0143080:three_prime_UTR 20.0%
!!! ATTTTATGAAATTAGAGTGA+AGG + chr1_4:1993526-1993545 Msa0143080:three_prime_UTR 20.0%
!! AACTTTTACTTCTGAACTAA+AGG - chr1_4:1986154-1986173 None:intergenic 25.0%
!! TGAAATATGAACTAGTTTCT+TGG + chr1_4:1986249-1986268 Msa0143080:CDS 25.0%
! AATCATTCATTTCAACAAGA+TGG - chr1_4:1986364-1986383 None:intergenic 25.0%
! TCAATAAAGACAAAGTTAGA+AGG - chr1_4:1986545-1986564 None:intergenic 25.0%
! TCTAACTTTGTCTTTATTGA+TGG + chr1_4:1986545-1986564 Msa0143080:CDS 25.0%
!!! GGATTTCATGTTTTTTTGTA+AGG - chr1_4:1986966-1986985 None:intergenic 25.0%
!!! CGTTCTTTTAGTTAATGTTT+GGG - chr1_4:1987067-1987086 None:intergenic 25.0%
!!! TCGTTCTTTTAGTTAATGTT+TGG - chr1_4:1987068-1987087 None:intergenic 25.0%
! AACATTAACTAAAAGAACGA+AGG + chr1_4:1987068-1987087 Msa0143080:intron 25.0%
!!! GAGTGTTTTAAACACATTTT+AGG + chr1_4:1987162-1987181 Msa0143080:intron 25.0%
!!! TAAGTTACTAGTGTCATTTA+AGG - chr1_4:1987224-1987243 None:intergenic 25.0%
!!! GAGTGAGTTTGATATTTTTT+TGG + chr1_4:1987730-1987749 Msa0143080:intron 25.0%
! TAGATACATACAAATGAATG+TGG - chr1_4:1987898-1987917 None:intergenic 25.0%
!! TTTTCATGTCATGTTATTCT+TGG - chr1_4:1987928-1987947 None:intergenic 25.0%
!! ATTTAAAAAGGTGTGAATTG+AGG + chr1_4:1988235-1988254 Msa0143080:intron 25.0%
! TAAAAAACCTCAATTGGATA+AGG - chr1_4:1988278-1988297 None:intergenic 25.0%
! TTCAGATAAAAAACCTCAAT+TGG - chr1_4:1988284-1988303 None:intergenic 25.0%
! TTGGAACAAGATATAGAAAT+GGG - chr1_4:1988393-1988412 None:intergenic 25.0%
!! GAAATCAATGGTAATTTTGA+AGG + chr1_4:1988685-1988704 Msa0143080:CDS 25.0%
!!! AATGGTAATTTTGAAGGAAT+TGG + chr1_4:1988691-1988710 Msa0143080:CDS 25.0%
!!! GATGTTTTAAAAACCAAACT+AGG + chr1_4:1989337-1989356 Msa0143080:intron 25.0%
! TACTTTAAACCATTAAAACC+AGG - chr1_4:1989428-1989447 None:intergenic 25.0%
! AAAGTAGTTGAACTATGATT+CGG + chr1_4:1989442-1989461 Msa0143080:intron 25.0%
! TGTAGGTTTGATGTTTAATT+CGG + chr1_4:1989471-1989490 Msa0143080:intron 25.0%
! AAAACACACATAAAAACCAA+AGG - chr1_4:1989593-1989612 None:intergenic 25.0%
!!! CCCATATTTGTATTTTTGAT+TGG + chr1_4:1989788-1989807 Msa0143080:intron 25.0%
!!! AAACTAGACTTGTTTTTGTT+TGG + chr1_4:1990066-1990085 Msa0143080:intron 25.0%
!! ATTTTATATAGTTAGGCACT+TGG + chr1_4:1990541-1990560 Msa0143080:intron 25.0%
!! TTTTATATAGTTAGGCACTT+GGG + chr1_4:1990542-1990561 Msa0143080:intron 25.0%
!!! TAGAGTTTTTTGAAGGAAAA+AGG - chr1_4:1990650-1990669 None:intergenic 25.0%
!!! TGAAGTTTAGAGTTTTTTGA+AGG - chr1_4:1990657-1990676 None:intergenic 25.0%
!! TGTTTGCTTATTTAAGCTTT+TGG + chr1_4:1990803-1990822 Msa0143080:intron 25.0%
! ACGGAAAAAAGCAAAAATAA+AGG - chr1_4:1990853-1990872 None:intergenic 25.0%
! TATCTACTAATCGATTGATT+TGG - chr1_4:1990903-1990922 None:intergenic 25.0%
! TGTAAAAACTTCTTTGCATT+TGG + chr1_4:1991545-1991564 Msa0143080:intron 25.0%
! AAAAATCTCAAAATCACTGA+TGG - chr1_4:1991654-1991673 None:intergenic 25.0%
! CATGTAATAAAACTACAAAC+TGG - chr1_4:1991826-1991845 None:intergenic 25.0%
! GACAAATATAGAAAAAATGC+AGG - chr1_4:1991917-1991936 None:intergenic 25.0%
! TATTTGTGATCACATAAGTA+AGG + chr1_4:1991945-1991964 Msa0143080:intron 25.0%
!!! TTTTTCATGCTATTCTAGAA+CGG - chr1_4:1992112-1992131 None:intergenic 25.0%
!! TGTTAGTAAAAAAGTGTATC+AGG + chr1_4:1992176-1992195 Msa0143080:intron 25.0%
!!! GCAAGACCTTATTTTAATAA+TGG + chr1_4:1992873-1992892 Msa0143080:intron 25.0%
!!! TATTTAATGAGAGTATTGAC+AGG - chr1_4:1992934-1992953 None:intergenic 25.0%
! ATATTCCAGGAAATTGTTAT+AGG - chr1_4:1992994-1993013 None:intergenic 25.0%
! AAAATGAGATGACATATATG+AGG + chr1_4:1993166-1993185 Msa0143080:three_prime_UTR 25.0%
!!! TACATTATTTATTGGCTTGA+AGG + chr1_4:1993376-1993395 Msa0143080:three_prime_UTR 25.0%
!!! ACATTATTTATTGGCTTGAA+GGG + chr1_4:1993377-1993396 Msa0143080:three_prime_UTR 25.0%
!! AACAATTAGATTTTCTTCTG+TGG - chr1_4:1993423-1993442 None:intergenic 25.0%
! AGGCAATTGAAATTTTGCAT+AGG + chr1_4:1986040-1986059 Msa0143080:CDS 30.0%
!! AAATTTTGCATAGGCTTTGT+GGG + chr1_4:1986049-1986068 Msa0143080:CDS 30.0%
AGTTCAGAAGTAAAAGTTAG+TGG + chr1_4:1986156-1986175 Msa0143080:intron 30.0%
GTTCAGAAGTAAAAGTTAGT+GGG + chr1_4:1986157-1986176 Msa0143080:intron 30.0%
TTCAGAAGTAAAAGTTAGTG+GGG + chr1_4:1986158-1986177 Msa0143080:intron 30.0%
! CTCTACTAATTTGTGTTGAT+AGG + chr1_4:1986184-1986203 Msa0143080:intron 30.0%
! CTAATTTGTGTTGATAGGAA+TGG + chr1_4:1986189-1986208 Msa0143080:intron 30.0%
TCCAAGTTAAAGATGAATGT+CGG + chr1_4:1986573-1986592 Msa0143080:CDS 30.0%
!! CTCAATTTTGAGAACTCTTT+TGG + chr1_4:1986684-1986703 Msa0143080:intron 30.0%
TGTATTATCCTCGTACAAAA+TGG + chr1_4:1987288-1987307 Msa0143080:intron 30.0%
TCTATATGAAAGTTACAACG+AGG + chr1_4:1987342-1987361 Msa0143080:intron 30.0%
CTATATGAAAGTTACAACGA+GGG + chr1_4:1987343-1987362 Msa0143080:intron 30.0%
! AACGAGGGCTTTTATATTAA+GGG + chr1_4:1987358-1987377 Msa0143080:intron 30.0%
! AATAATCTCTTTTCATTGGC+AGG + chr1_4:1987477-1987496 Msa0143080:intron 30.0%
AACATAGCGTTATATGTGAT+CGG - chr1_4:1987557-1987576 None:intergenic 30.0%
TGCAAAAATATCGTCAACAT+TGG + chr1_4:1987580-1987599 Msa0143080:intron 30.0%
GAGTTGTTAGTTAAATTCCA+AGG - chr1_4:1987690-1987709 None:intergenic 30.0%
TGGAATATTAAGGGATTTGT+AGG + chr1_4:1987750-1987769 Msa0143080:intron 30.0%
!! GTTTTAGATAAGCGATAAAG+TGG - chr1_4:1987848-1987867 None:intergenic 30.0%
! AAGTTACCATTTTCGTGATA+GGG - chr1_4:1988350-1988369 None:intergenic 30.0%
GTTGGAACAAGATATAGAAA+TGG - chr1_4:1988394-1988413 None:intergenic 30.0%
GAAGAAGAAGAAGAAATCAA+TGG + chr1_4:1988673-1988692 Msa0143080:CDS 30.0%
TCTGAAGATGATGAAGAATT+GGG + chr1_4:1988718-1988737 Msa0143080:CDS 30.0%
AAATGAATCCCATTCCTAAA+CGG - chr1_4:1989006-1989025 None:intergenic 30.0%
! TTAGGAATGGGATTCATTTT+CGG + chr1_4:1989007-1989026 Msa0143080:CDS 30.0%
ACACATAGTATATCTTATGG+TGG - chr1_4:1989306-1989325 None:intergenic 30.0%
ACTAATTAAACTGCCTAGTT+TGG - chr1_4:1989353-1989372 None:intergenic 30.0%
AACTGACATTGTCTATTGTA+CGG + chr1_4:1989382-1989401 Msa0143080:intron 30.0%
! ATTCAAACACAATTTTGTCC+TGG + chr1_4:1989407-1989426 Msa0143080:intron 30.0%
!!! CAATTTTGTCCTGGTTTTAA+TGG + chr1_4:1989416-1989435 Msa0143080:intron 30.0%
!!! TTGATTTGAAGGGTGTTTTT+AGG + chr1_4:1989504-1989523 Msa0143080:intron 30.0%
TGGAAGTTAAAAGTAAGACA+TGG + chr1_4:1989631-1989650 Msa0143080:intron 30.0%
GTCATTTAAACATCGAAACA+CGG - chr1_4:1989688-1989707 None:intergenic 30.0%
TTAGAGGAACAAAACTGAAA+AGG - chr1_4:1989868-1989887 None:intergenic 30.0%
TTATTCTTGTTCGAGATTGT+TGG + chr1_4:1990102-1990121 Msa0143080:intron 30.0%
TATTCTTGTTCGAGATTGTT+GGG + chr1_4:1990103-1990122 Msa0143080:intron 30.0%
!!! TTCTTTTGTTTTCCTGAATC+TGG + chr1_4:1990150-1990169 Msa0143080:intron 30.0%
! CGTATATGAATTTGAAACTC+AGG - chr1_4:1990176-1990195 None:intergenic 30.0%
!!! AATGCTGGTTTCTTTTGATT+AGG + chr1_4:1990204-1990223 Msa0143080:intron 30.0%
CAATACGAAGTTAGATCAAA+AGG - chr1_4:1990745-1990764 None:intergenic 30.0%
GAGATATAACAGTTATCAGA+CGG - chr1_4:1990872-1990891 None:intergenic 30.0%
AACATAAAGACATTCAGAGT+GGG - chr1_4:1990935-1990954 None:intergenic 30.0%
ACACTCATAAGCTAAATAGA+TGG - chr1_4:1991032-1991051 None:intergenic 30.0%
GCGTAAAAATAAAGAAGACA+GGG + chr1_4:1991448-1991467 Msa0143080:CDS 30.0%
TAAAAATAAAGAAGACAGGG+AGG + chr1_4:1991451-1991470 Msa0143080:CDS 30.0%
CTAATCTAACCTATTTCAGA+TGG + chr1_4:1991569-1991588 Msa0143080:intron 30.0%
ATGATAGCAGTTCAAATGTT+TGG + chr1_4:1991675-1991694 Msa0143080:CDS 30.0%
GTAATAAAACTACAAACTGG+TGG - chr1_4:1991823-1991842 None:intergenic 30.0%
!!! TTTTTTGGCAAAGTCTAGAA+AGG - chr1_4:1992076-1992095 None:intergenic 30.0%
AGCATGAAAAATATAAAGGC+TGG + chr1_4:1992121-1992140 Msa0143080:intron 30.0%
!!! GACATTTTGGAATCTTTTCT+CGG - chr1_4:1992285-1992304 None:intergenic 30.0%
ATCTTATTGCTGATGTTTCT+AGG - chr1_4:1992591-1992610 None:intergenic 30.0%
AGAAACATCAGCAATAAGAT+AGG + chr1_4:1992591-1992610 Msa0143080:intron 30.0%
GAAACATCAGCAATAAGATA+GGG + chr1_4:1992592-1992611 Msa0143080:intron 30.0%
AAACATCAGCAATAAGATAG+GGG + chr1_4:1992593-1992612 Msa0143080:intron 30.0%
TGTCCACAGATTCAATTAAA+TGG + chr1_4:1992778-1992797 Msa0143080:CDS 30.0%
ATTCAATTAAATGGCCTGAA+TGG + chr1_4:1992787-1992806 Msa0143080:CDS 30.0%
ATATAGTACAGCATTTACCA+TGG + chr1_4:1992951-1992970 Msa0143080:intron 30.0%
CCATTATGTACAAATATTCC+AGG - chr1_4:1993007-1993026 None:intergenic 30.0%
CCTGGAATATTTGTACATAA+TGG + chr1_4:1993004-1993023 Msa0143080:intron 30.0%
! AACACTTTTATGATCACTTC+TGG - chr1_4:1993569-1993588 None:intergenic 30.0%
! GCTATTTGGAACTTACTGTT+TGG + chr1_4:1985990-1986009 Msa0143080:CDS 35.0%
! GAAATTTTGCATAGGCTTTG+TGG + chr1_4:1986048-1986067 Msa0143080:CDS 35.0%
!! AATTTTGCATAGGCTTTGTG+GGG + chr1_4:1986050-1986069 Msa0143080:CDS 35.0%
TGGTAAATAATCACTCACCA+GGG - chr1_4:1986089-1986108 None:intergenic 35.0%
TTGGTAAATAATCACTCACC+AGG - chr1_4:1986090-1986109 None:intergenic 35.0%
CTATTAGCCAATGGAACAAT+GGG - chr1_4:1986120-1986139 None:intergenic 35.0%
TCTATTAGCCAATGGAACAA+TGG - chr1_4:1986121-1986140 None:intergenic 35.0%
!!! TTTTAATTTGCCAGCAGCTT+TGG + chr1_4:1986214-1986233 Msa0143080:intron 35.0%
!!! TCTATTTTTGGAGCACTTGT+TGG + chr1_4:1986302-1986321 Msa0143080:CDS 35.0%
! ATATTGATTATGCTCTGCAG+TGG + chr1_4:1986387-1986406 Msa0143080:CDS 35.0%
! TATTGATTATGCTCTGCAGT+GGG + chr1_4:1986388-1986407 Msa0143080:CDS 35.0%
! CTACAACTTTTGAGCAACAA+TGG + chr1_4:1986462-1986481 Msa0143080:CDS 35.0%
TTCCAATAAGGACTCAAGAA+GGG - chr1_4:1986512-1986531 None:intergenic 35.0%
ATTCCAATAAGGACTCAAGA+AGG - chr1_4:1986513-1986532 None:intergenic 35.0%
TCCGACATTCATCTTTAACT+TGG - chr1_4:1986577-1986596 None:intergenic 35.0%
CTCACACATTCATGCATTAT+GGG - chr1_4:1986623-1986642 None:intergenic 35.0%
TCTCACACATTCATGCATTA+TGG - chr1_4:1986624-1986643 None:intergenic 35.0%
AACACAGAAGTTCATTGCTT+AGG - chr1_4:1986873-1986892 None:intergenic 35.0%
AGTCTCGTACTGTTGTTAAA+TGG + chr1_4:1987029-1987048 Msa0143080:intron 35.0%
GTCTCGTACTGTTGTTAAAT+GGG + chr1_4:1987030-1987049 Msa0143080:intron 35.0%
TCTCGTACTGTTGTTAAATG+GGG + chr1_4:1987031-1987050 Msa0143080:intron 35.0%
! TTTCAAGTCCTACATTGCTT+AGG - chr1_4:1987196-1987215 None:intergenic 35.0%
! TAATGTGTCCATTTTGTACG+AGG - chr1_4:1987299-1987318 None:intergenic 35.0%
! CAACGAGGGCTTTTATATTA+AGG + chr1_4:1987357-1987376 Msa0143080:intron 35.0%
!!! GTCAACATTGGCTTTCATTT+TGG + chr1_4:1987592-1987611 Msa0143080:intron 35.0%
TTAACTAACCCTCTTTGCTT+CGG + chr1_4:1987789-1987808 Msa0143080:intron 35.0%
ATGAGTTTCTTGTGTAGTGT+AGG + chr1_4:1987868-1987887 Msa0143080:intron 35.0%
TCATGTCATGTTATTCTTGG+CGG - chr1_4:1987925-1987944 None:intergenic 35.0%
! AGTTACCATTTTCGTGATAG+GGG - chr1_4:1988349-1988368 None:intergenic 35.0%
! GAAGTTACCATTTTCGTGAT+AGG - chr1_4:1988351-1988370 None:intergenic 35.0%
!! TTGGTGAATTGGTGTTGATT+CGG - chr1_4:1988611-1988630 None:intergenic 35.0%
GTCTGAAGATGATGAAGAAT+TGG + chr1_4:1988717-1988736 Msa0143080:CDS 35.0%
CTGAAGATGATGAAGAATTG+GGG + chr1_4:1988719-1988738 Msa0143080:CDS 35.0%
TGATGAAGAATTGGGGTTTA+TGG + chr1_4:1988726-1988745 Msa0143080:CDS 35.0%
TTGAAGAAGGTGAAGAATTC+TGG + chr1_4:1988758-1988777 Msa0143080:CDS 35.0%
AACTGAAGAAGAAGAAGTGA+AGG + chr1_4:1988789-1988808 Msa0143080:CDS 35.0%
TGAATTCGTTGTTACCGTTT+AGG + chr1_4:1988989-1989008 Msa0143080:CDS 35.0%
! TAGGAATGGGATTCATTTTC+GGG + chr1_4:1989008-1989027 Msa0143080:CDS 35.0%
TGATACTTTGATGTCCAGTA+TGG + chr1_4:1989564-1989583 Msa0143080:intron 35.0%
! TTTTAAATGCCTGCAAGTTG+TGG + chr1_4:1989611-1989630 Msa0143080:intron 35.0%
!!! TTTTAACTTCCACAACTTGC+AGG - chr1_4:1989623-1989642 None:intergenic 35.0%
GACATGGAGATAAGCATATA+CGG + chr1_4:1989647-1989666 Msa0143080:intron 35.0%
! AACAAGTCTAGTTTCAGACA+TGG - chr1_4:1989947-1989966 None:intergenic 35.0%
! AACAAGTCTAGTTTCAGACA+TGG - chr1_4:1989947-1989966 None:intergenic 35.0%
ATTCTTGTTCGAGATTGTTG+GGG + chr1_4:1990104-1990123 Msa0143080:intron 35.0%
ATATACGAGTCTAAGAATGC+TGG + chr1_4:1990189-1990208 Msa0143080:intron 35.0%
!! GTTTCTTTTGATTAGGTGGT+TGG + chr1_4:1990211-1990230 Msa0143080:intron 35.0%
TTGGGAAGCAAAGTTGTAAA+GGG - chr1_4:1990347-1990366 None:intergenic 35.0%
ATTGGGAAGCAAAGTTGTAA+AGG - chr1_4:1990348-1990367 None:intergenic 35.0%
CATAGTTGAATCGTAGTCAA+AGG - chr1_4:1990384-1990403 None:intergenic 35.0%
CTTTGACTACGATTCAACTA+TGG + chr1_4:1990382-1990401 Msa0143080:CDS 35.0%
TTGAAGGAAAAAGGAAAGCA+AGG - chr1_4:1990641-1990660 None:intergenic 35.0%
!! TAATCGATTGATTTGGAGTC+TGG - chr1_4:1990896-1990915 None:intergenic 35.0%
CAACATAAAGACATTCAGAG+TGG - chr1_4:1990936-1990955 None:intergenic 35.0%
TTAAACCAATGGATAACCCT+TGG - chr1_4:1990994-1991013 None:intergenic 35.0%
! ATTTTTCTGTATGAACCCTC+TGG + chr1_4:1991064-1991083 Msa0143080:intron 35.0%
TGAAATAGCATACTACCAGA+GGG - chr1_4:1991082-1991101 None:intergenic 35.0%
TTGAAATAGCATACTACCAG+AGG - chr1_4:1991083-1991102 None:intergenic 35.0%
ATTTAAGGGTGAGAAAATGG+AGG - chr1_4:1991135-1991154 None:intergenic 35.0%
CAGATTTAAGGGTGAGAAAA+TGG - chr1_4:1991138-1991157 None:intergenic 35.0%
TTTCAGATACATGTCGTTGA+TGG + chr1_4:1991185-1991204 Msa0143080:intron 35.0%
! AGATTGCAACTTTTCCTTGA+AGG - chr1_4:1991348-1991367 None:intergenic 35.0%
AAGGAAAAGTTGCAATCTCA+TGG + chr1_4:1991350-1991369 Msa0143080:CDS 35.0%
AGGAAAAGTTGCAATCTCAT+GGG + chr1_4:1991351-1991370 Msa0143080:CDS 35.0%
GGCGTAAAAATAAAGAAGAC+AGG + chr1_4:1991447-1991466 Msa0143080:CDS 35.0%
! ATATCTCGTCCATCTGAAAT+AGG - chr1_4:1991581-1991600 None:intergenic 35.0%
TATTTCAGATGGACGAGATA+TGG + chr1_4:1991580-1991599 Msa0143080:intron 35.0%
CATGAATCATATTGCTCATG+CGG + chr1_4:1991607-1991626 Msa0143080:CDS 35.0%
!!! AACAATAGCCAGCTACTTTT+TGG - chr1_4:1992035-1992054 None:intergenic 35.0%
AAAAAGTAGCTGGCTATTGT+TGG + chr1_4:1992034-1992053 Msa0143080:intron 35.0%
! AAACCGGTGAATCTTTTAAC+AGG + chr1_4:1992249-1992268 Msa0143080:CDS 35.0%
GTACCTGTTAAAAGATTCAC+CGG - chr1_4:1992255-1992274 None:intergenic 35.0%
AAGATTCCAAAATGTCCTTG+AGG + chr1_4:1992289-1992308 Msa0143080:CDS 35.0%
CGAATGAAGCAATTAGCATA+TGG + chr1_4:1992436-1992455 Msa0143080:intron 35.0%
TCGAAACATTGCTTCCTTAA+AGG + chr1_4:1992501-1992520 Msa0143080:intron 35.0%
AAACATTGCTTCCTTAAAGG+TGG + chr1_4:1992504-1992523 Msa0143080:intron 35.0%
TAGTGTTTGTTCCACCTTTA+AGG - chr1_4:1992518-1992537 None:intergenic 35.0%
CAAATTCTAGGTTACTCTTG+AGG - chr1_4:1992561-1992580 None:intergenic 35.0%
CTAGGCTAGAAACAAATTCT+AGG - chr1_4:1992573-1992592 None:intergenic 35.0%
CTGATACATAGCAGAACAAA+TGG - chr1_4:1992703-1992722 None:intergenic 35.0%
TTGTTCTGCTATGTATCAGA+TGG + chr1_4:1992704-1992723 Msa0143080:intron 35.0%
TGTATCAGATGGAGATGATA+TGG + chr1_4:1992715-1992734 Msa0143080:intron 35.0%
AGGCCATTTAATTGAATCTG+TGG - chr1_4:1992784-1992803 None:intergenic 35.0%
GAAGTAATGCCACTCTAATT+GGG + chr1_4:1992809-1992828 Msa0143080:exon 35.0%
TTTCGTAGTTGCAGTACATA+TGG - chr1_4:1992846-1992865 None:intergenic 35.0%
ATGTACTGCAACTACGAAAT+AGG + chr1_4:1992847-1992866 Msa0143080:three_prime_UTR 35.0%
AATTACACACTTGTTCCTGA+TGG + chr1_4:1993238-1993257 Msa0143080:three_prime_UTR 35.0%
TTAGTCAAGATACAGTCGTA+AGG + chr1_4:1993339-1993358 Msa0143080:three_prime_UTR 35.0%
TAGTCAAGATACAGTCGTAA+GGG + chr1_4:1993340-1993359 Msa0143080:three_prime_UTR 35.0%
! ACTTTTATGATCACTTCTGG+TGG - chr1_4:1993566-1993585 None:intergenic 35.0%
TGGAACTTACTGTTTGGATG+AGG + chr1_4:1985996-1986015 Msa0143080:CDS 40.0%
GGAACTTACTGTTTGGATGA+GGG + chr1_4:1985997-1986016 Msa0143080:CDS 40.0%
AATTGCCTTGTCTTGTACAG+AGG - chr1_4:1986028-1986047 None:intergenic 40.0%
TCCAATAAGGACTCAAGAAG+GGG - chr1_4:1986511-1986530 None:intergenic 40.0%
GGAGAGTTGTCATTCCAATA+AGG - chr1_4:1986524-1986543 None:intergenic 40.0%
! ATGTCGGAGAAAGTACAGAA+AGG + chr1_4:1986589-1986608 Msa0143080:intron 40.0%
ACTTCACATCTTCAAGTGTG+AGG + chr1_4:1987404-1987423 Msa0143080:intron 40.0%
! ATCGGTGATATTGATGATCG+TGG - chr1_4:1987539-1987558 None:intergenic 40.0%
AGTTTCTTGTGTAGTGTAGG+AGG + chr1_4:1987871-1987890 Msa0143080:intron 40.0%
GTTTCTTGTGTAGTGTAGGA+GGG + chr1_4:1987872-1987891 Msa0143080:intron 40.0%
CATGTCATGTTATTCTTGGC+GGG - chr1_4:1987924-1987943 None:intergenic 40.0%
!! TTGAGGTTTTTCAACACGTG+TGG + chr1_4:1988252-1988271 Msa0143080:intron 40.0%
TTGTTCCCCTATCACGAAAA+TGG + chr1_4:1988341-1988360 Msa0143080:intron 40.0%
TGGTAACTTCAATCTCACCA+TGG + chr1_4:1988361-1988380 Msa0143080:intron 40.0%
ATAGAAATGGGAGAGAACCA+TGG - chr1_4:1988381-1988400 None:intergenic 40.0%
ATTTGGAGGAGGTTTGGATT+TGG - chr1_4:1988451-1988470 None:intergenic 40.0%
! TTTAGGATTTGGAGGAGGTT+TGG - chr1_4:1988457-1988476 None:intergenic 40.0%
! TTGAGTTTAGGATTTGGAGG+AGG - chr1_4:1988462-1988481 None:intergenic 40.0%
! GTGTTGAGTTTAGGATTTGG+AGG - chr1_4:1988465-1988484 None:intergenic 40.0%
!! TGGGTGTTGAGTTTAGGATT+TGG - chr1_4:1988468-1988487 None:intergenic 40.0%
! GATTCGGAGAGTTTGATTTC+AGG - chr1_4:1988595-1988614 None:intergenic 40.0%
TTGTGGAGCAATTGGTGAAT+TGG - chr1_4:1988622-1988641 None:intergenic 40.0%
TATCGAGTTTGTGGAGCAAT+TGG - chr1_4:1988630-1988649 None:intergenic 40.0%
CATCATCGTTATCGAGTTTG+TGG - chr1_4:1988639-1988658 None:intergenic 40.0%
AGAATTGGGGTTTATGGATG+AGG + chr1_4:1988732-1988751 Msa0143080:CDS 40.0%
ATGGATGAGGAGATTGAAGA+AGG + chr1_4:1988745-1988764 Msa0143080:CDS 40.0%
GAAGAAGAAGTGAAGGAGAA+AGG + chr1_4:1988796-1988815 Msa0143080:CDS 40.0%
TCGTTGTTACCGTTTAGGAA+TGG + chr1_4:1988994-1989013 Msa0143080:CDS 40.0%
CGTTGTTACCGTTTAGGAAT+GGG + chr1_4:1988995-1989014 Msa0143080:CDS 40.0%
!! GATTTTGGAGATGGTGTATC+CGG + chr1_4:1989143-1989162 Msa0143080:CDS 40.0%
!! ATTTTGGAGATGGTGTATCC+GGG + chr1_4:1989144-1989163 Msa0143080:CDS 40.0%
!!! GGAATGCTGCTTTTAAGAGT+GGG + chr1_4:1989208-1989227 Msa0143080:CDS 40.0%
TCACCATTCTCAGCAATCTT+CGG - chr1_4:1989246-1989265 None:intergenic 40.0%
ATTGCTGAGAATGGTGAACA+AGG + chr1_4:1989249-1989268 Msa0143080:CDS 40.0%
! GTAGTTGAACTATGATTCGG+TGG + chr1_4:1989445-1989464 Msa0143080:intron 40.0%
AAAACCAAAGGACACCATAC+TGG - chr1_4:1989581-1989600 None:intergenic 40.0%
GAAAGAAGTCGTGACTTTAG+AGG + chr1_4:1989764-1989783 Msa0143080:intron 40.0%
GAGTATGTAACGTATGTGAG+TGG + chr1_4:1989812-1989831 Msa0143080:intron 40.0%
TGGCATTAAAAGCGAGCATA+TGG + chr1_4:1989832-1989851 Msa0143080:intron 40.0%
ATTAAAAGCGAGCATATGGC+TGG + chr1_4:1989836-1989855 Msa0143080:intron 40.0%
TGTCCACAGTCCATAACAAA+CGG + chr1_4:1989908-1989927 Msa0143080:intron 40.0%
!!! TTTTGTTTTGGCTTTCGCAC+CGG + chr1_4:1989974-1989993 Msa0143080:intron 40.0%
!! GCTGGTTTCTTTTGATTAGG+TGG + chr1_4:1990207-1990226 Msa0143080:intron 40.0%
GTTGGAGTTAGAACTTAAGC+TGG + chr1_4:1990229-1990248 Msa0143080:CDS 40.0%
GTTGCAGATGTTGGTATAGT+TGG + chr1_4:1990251-1990270 Msa0143080:CDS 40.0%
TACAACTTTGCTTCCCAATC+TGG + chr1_4:1990349-1990368 Msa0143080:CDS 40.0%
ACAACTTTGCTTCCCAATCT+GGG + chr1_4:1990350-1990369 Msa0143080:CDS 40.0%
CTACGATTCAACTATGGTAG+TGG + chr1_4:1990388-1990407 Msa0143080:CDS 40.0%
CATGACCTAAACCAAAACCT+CGG - chr1_4:1990445-1990464 None:intergenic 40.0%
AATTTCTGCGACACACTGAA+AGG + chr1_4:1990465-1990484 Msa0143080:CDS 40.0%
TTGTTCCAAGGGTTATCCAT+TGG + chr1_4:1990986-1991005 Msa0143080:intron 40.0%
! TTCCAGAAGCATACGAAAAC+TGG + chr1_4:1991318-1991337 Msa0143080:CDS 40.0%
! TCCAGAAGCATACGAAAACT+GGG + chr1_4:1991319-1991338 Msa0143080:CDS 40.0%
TTGACAGCGCTCATACAAAA+AGG - chr1_4:1991383-1991402 None:intergenic 40.0%
! TTTGTATGAGCGCTGTCAAA+AGG + chr1_4:1991384-1991403 Msa0143080:CDS 40.0%
! TTGTATGAGCGCTGTCAAAA+GGG + chr1_4:1991385-1991404 Msa0143080:CDS 40.0%
! TCAAATGTTTGGAGCGTAGT+TGG + chr1_4:1991686-1991705 Msa0143080:CDS 40.0%
! CAAATGTTTGGAGCGTAGTT+GGG + chr1_4:1991687-1991706 Msa0143080:CDS 40.0%
! TCGTTTTGTCCAGATGACAT+TGG + chr1_4:1991721-1991740 Msa0143080:CDS 40.0%
! TTTTGTCCAGATGACATTGG+CGG + chr1_4:1991724-1991743 Msa0143080:CDS 40.0%
AGCCTAAACCAAAAAGTAGC+TGG + chr1_4:1992024-1992043 Msa0143080:intron 40.0%
!!! AGCCAGCTACTTTTTGGTTT+AGG - chr1_4:1992029-1992048 None:intergenic 40.0%
ACATGTATCAAGCATCAGAG+AGG - chr1_4:1992159-1992178 None:intergenic 40.0%
TGAATGGAGGTGGAAATTTC+AGG - chr1_4:1992214-1992233 None:intergenic 40.0%
GAAATTTCCACCTCCATTCA+TGG + chr1_4:1992214-1992233 Msa0143080:CDS 40.0%
ATGAGACTATCCATGAATGG+AGG - chr1_4:1992227-1992246 None:intergenic 40.0%
TCCATTCATGGATAGTCTCA+TGG + chr1_4:1992226-1992245 Msa0143080:CDS 40.0%
TCCATGAGACTATCCATGAA+TGG - chr1_4:1992230-1992249 None:intergenic 40.0%
ATGGATAGTCTCATGGAAAC+CGG + chr1_4:1992233-1992252 Msa0143080:CDS 40.0%
TAAATACACCACAAGCCTCA+AGG - chr1_4:1992307-1992326 None:intergenic 40.0%
TTTAAGTCTCTCGTGAAACG+TGG + chr1_4:1992323-1992342 Msa0143080:CDS 40.0%
TGGTCACTGGGTATGAATTA+TGG - chr1_4:1992683-1992702 None:intergenic 40.0%
TAGCAGAACAAATGGTCACT+GGG - chr1_4:1992695-1992714 None:intergenic 40.0%
ATAGCAGAACAAATGGTCAC+TGG - chr1_4:1992696-1992715 None:intergenic 40.0%
CATGACTCCTCAAACAAATC+TGG + chr1_4:1992738-1992757 Msa0143080:CDS 40.0%
! TGATGCACCAGATTTGTTTG+AGG - chr1_4:1992748-1992767 None:intergenic 40.0%
GGAAGTAATGCCACTCTAAT+TGG + chr1_4:1992808-1992827 Msa0143080:exon 40.0%
!! GAGAGTATTGACAGGTTTCA+TGG - chr1_4:1992926-1992945 None:intergenic 40.0%
CTTGGCAATAAGAGAAACCA+TGG - chr1_4:1992971-1992990 None:intergenic 40.0%
CCAGGAAATTGTTATAGGCT+TGG - chr1_4:1992989-1993008 None:intergenic 40.0%
CCAAGCCTATAACAATTTCC+TGG + chr1_4:1992986-1993005 Msa0143080:intron 40.0%
GTTCATGTAGGAAGCAAGTT+CGG + chr1_4:1993141-1993160 Msa0143080:three_prime_UTR 40.0%
CTTTACCGTTATGCTTCTTG+AGG - chr1_4:1993212-1993231 None:intergenic 40.0%
!! TTTTATTTGACGTGAAGCCG+AGG + chr1_4:1993294-1993313 Msa0143080:three_prime_UTR 40.0%
CCTTGTCTTGTACAGAGGAA+AGG - chr1_4:1986023-1986042 None:intergenic 45.0%
CCTTTCCTCTGTACAAGACA+AGG + chr1_4:1986020-1986039 Msa0143080:CDS 45.0%
! TGGAACAATGGGTCTGGAAT+TGG - chr1_4:1986109-1986128 None:intergenic 45.0%
TTCCAGACCCATTGTTCCAT+TGG + chr1_4:1986110-1986129 Msa0143080:intron 45.0%
!! AGATCTGGTGTTGTAGGAAG+TGG - chr1_4:1986426-1986445 None:intergenic 45.0%
TTCCTACAACACCAGATCTG+AGG + chr1_4:1986427-1986446 Msa0143080:CDS 45.0%
!! TTCCTCAGATCTGGTGTTGT+AGG - chr1_4:1986432-1986451 None:intergenic 45.0%
GGGGTATATGTCATTGTGCA+TGG - chr1_4:1986492-1986511 None:intergenic 45.0%
ACCCCTTCTTGAGTCCTTAT+TGG + chr1_4:1986507-1986526 Msa0143080:CDS 45.0%
! TCGGAGAAAGTACAGAAAGG+AGG + chr1_4:1986592-1986611 Msa0143080:intron 45.0%
! CCTACATTGCTTAGGTATCG+AGG - chr1_4:1987188-1987207 None:intergenic 45.0%
CCTCGATACCTAAGCAATGT+AGG + chr1_4:1987185-1987204 Msa0143080:intron 45.0%
GTTAAATTCCAAGGCAAGCC+CGG - chr1_4:1987681-1987700 None:intergenic 45.0%
TTAAGGGATTTGTAGGCGAG+TGG + chr1_4:1987757-1987776 Msa0143080:intron 45.0%
TTCCTCAACCGAAGCAAAGA+GGG - chr1_4:1987800-1987819 None:intergenic 45.0%
!! GACTTGTGGGTGTTGAGTTT+AGG - chr1_4:1988474-1988493 None:intergenic 45.0%
AAGAGAAGTCTTCCCTGAGA+GGG - chr1_4:1988551-1988570 None:intergenic 45.0%
! GTTTGATTTCAGGAGGAGGA+AGG - chr1_4:1988585-1988604 None:intergenic 45.0%
! GAGAGTTTGATTTCAGGAGG+AGG - chr1_4:1988589-1988608 None:intergenic 45.0%
! TCGGAGAGTTTGATTTCAGG+AGG - chr1_4:1988592-1988611 None:intergenic 45.0%
!! AGGTGAAGAATTCTGGAGTG+AGG + chr1_4:1988765-1988784 Msa0143080:CDS 45.0%
AGTGAAGGAGAAAGGATTGC+CGG + chr1_4:1988804-1988823 Msa0143080:CDS 45.0%
GAGAAATACGTACCGTTTGG+AGG + chr1_4:1988907-1988926 Msa0143080:CDS 45.0%
!! AATGGGATTCATTTTCGGGC+AGG + chr1_4:1989012-1989031 Msa0143080:CDS 45.0%
!! ATGGGATTCATTTTCGGGCA+GGG + chr1_4:1989013-1989032 Msa0143080:CDS 45.0%
!! AGGATGCAGATTGGTGCTAA+GGG + chr1_4:1989057-1989076 Msa0143080:CDS 45.0%
!!! GGGAATGCTGCTTTTAAGAG+TGG + chr1_4:1989207-1989226 Msa0143080:CDS 45.0%
!! CTATGATTCGGTGGTCTTGT+AGG + chr1_4:1989454-1989473 Msa0143080:intron 45.0%
ATGTCCAGTATGGTGTCCTT+TGG + chr1_4:1989574-1989593 Msa0143080:intron 45.0%
TGACTTTCCTACAGAGGACA+CGG - chr1_4:1989723-1989742 None:intergenic 45.0%
AAGTCGTGACTTTCCTACAG+AGG - chr1_4:1989729-1989748 None:intergenic 45.0%
!! TCTCCGTTTGTTATGGACTG+TGG - chr1_4:1989914-1989933 None:intergenic 45.0%
! CGCATCATCTCCGTTTGTTA+TGG - chr1_4:1989921-1989940 None:intergenic 45.0%
TAACAAACGGAGATGATGCG+TGG + chr1_4:1989921-1989940 Msa0143080:intron 45.0%
TTGAAACTCAGGCCAGATTC+AGG - chr1_4:1990165-1990184 None:intergenic 45.0%
CTTAAGCTGGTTGCAGATGT+TGG + chr1_4:1990242-1990261 Msa0143080:CDS 45.0%
! ATAGTTGGTGCTCCAAATGC+AGG + chr1_4:1990266-1990285 Msa0143080:CDS 45.0%
! TAGTTGGTGCTCCAAATGCA+GGG + chr1_4:1990267-1990286 Msa0143080:CDS 45.0%
AGTGTACTCTTCCCTGCATT+TGG - chr1_4:1990281-1990300 None:intergenic 45.0%
TATTAGTGCTGCAAAGCCAG+AGG + chr1_4:1990310-1990329 Msa0143080:CDS 45.0%
! AAGGGATAATTTGCCACCTC+TGG - chr1_4:1990329-1990348 None:intergenic 45.0%
AAGGAAACAACGCCCAGATT+GGG - chr1_4:1990365-1990384 None:intergenic 45.0%
AAAGGAAACAACGCCCAGAT+TGG - chr1_4:1990366-1990385 None:intergenic 45.0%
GTTAGATCAAAAGGTCGCAG+TGG - chr1_4:1990736-1990755 None:intergenic 45.0%
! AAAGACATTCAGAGTGGGCT+GGG - chr1_4:1990930-1990949 None:intergenic 45.0%
TAAAGACATTCAGAGTGGGC+TGG - chr1_4:1990931-1990950 None:intergenic 45.0%
TCAAACTCAAGATCTGCCTG+TGG - chr1_4:1991218-1991237 None:intergenic 45.0%
AATGGCTTCTCAGCAAGTTC+AGG - chr1_4:1991272-1991291 None:intergenic 45.0%
! TCCCAGTTTTCGTATGCTTC+TGG - chr1_4:1991323-1991342 None:intergenic 45.0%
CGAAAACTGGGAATCCTTCA+AGG + chr1_4:1991331-1991350 Msa0143080:CDS 45.0%
TATGCGCTGCTTATGAGCTT+TGG + chr1_4:1991426-1991445 Msa0143080:CDS 45.0%
GAAGACAGGGAGGAATATGA+AGG + chr1_4:1991461-1991480 Msa0143080:CDS 45.0%
TGTATCAAGCATCAGAGAGG+AGG - chr1_4:1992156-1992175 None:intergenic 45.0%
AGACTATCCATGAATGGAGG+TGG - chr1_4:1992224-1992243 None:intergenic 45.0%
! CACAAGCCTCAAGGACATTT+TGG - chr1_4:1992298-1992317 None:intergenic 45.0%
CAAAATGTCCTTGAGGCTTG+TGG + chr1_4:1992296-1992315 Msa0143080:CDS 45.0%
GAAGGCGACAAAGTGATTGT+TGG + chr1_4:1992353-1992372 Msa0143080:CDS 45.0%
CGACAAAGTGATTGTTGGAG+AGG + chr1_4:1992358-1992377 Msa0143080:CDS 45.0%
CTTCATTCGTCATGCTAGCA+AGG - chr1_4:1992425-1992444 None:intergenic 45.0%
GAGTGGCATTACTTCCATTC+AGG - chr1_4:1992804-1992823 None:intergenic 45.0%
!! CTAGAAGCACCCAATTAGAG+TGG - chr1_4:1992821-1992840 None:intergenic 45.0%
CAGGTTTCATGGAGATAGCA+AGG - chr1_4:1992915-1992934 None:intergenic 45.0%
TTGAGAGCAGCAGTTCATGT+AGG + chr1_4:1993129-1993148 Msa0143080:intron 45.0%
! AGCTGCCTCAAGAAGCATAA+CGG + chr1_4:1993204-1993223 Msa0143080:three_prime_UTR 45.0%
TTGTGAGCAGTTGAAGACCT+CGG - chr1_4:1993314-1993333 None:intergenic 45.0%
!!! TTTTCATTTTATTTTTATTT+TGG - chr1_4:1988212-1988231 None:intergenic 5.0%
!!! TTATTATATTTTATATAGTT+AGG + chr1_4:1990534-1990553 Msa0143080:intron 5.0%
AGCCAATGGAACAATGGGTC+TGG - chr1_4:1986115-1986134 None:intergenic 50.0%
! TTTGGAGCACTTGTTGGACC+TGG + chr1_4:1986308-1986327 Msa0143080:CDS 50.0%
! TTGGAGCACTTGTTGGACCT+GGG + chr1_4:1986309-1986328 Msa0143080:CDS 50.0%
ATTATGCTCTGCAGTGGGTG+AGG + chr1_4:1986393-1986412 Msa0143080:CDS 50.0%
GCAGTCAACTTCCTCAGATC+TGG - chr1_4:1986441-1986460 None:intergenic 50.0%
AACCCTCTTTGCTTCGGTTG+AGG + chr1_4:1987795-1987814 Msa0143080:intron 50.0%
CTTCCTCAACCGAAGCAAAG+AGG - chr1_4:1987801-1987820 None:intergenic 50.0%
!! CGTGTGGCCTTATCCAATTG+AGG + chr1_4:1988268-1988287 Msa0143080:intron 50.0%
!! AGGAGGTTTGGATTTGGTGC+GGG - chr1_4:1988445-1988464 None:intergenic 50.0%
!! GAGGAGGTTTGGATTTGGTG+CGG - chr1_4:1988446-1988465 None:intergenic 50.0%
GAAGAGAAGTCTTCCCTGAG+AGG - chr1_4:1988552-1988571 None:intergenic 50.0%
! CTTTCGCGAAGATTTTCGCC+CGG - chr1_4:1988849-1988868 None:intergenic 50.0%
GCGAAAATCTTCGCGAAAGC+CGG + chr1_4:1988850-1988869 Msa0143080:CDS 50.0%
! GGAACGGAAGTATGGCATTC+AGG + chr1_4:1988881-1988900 Msa0143080:CDS 50.0%
! ACGGAAGTATGGCATTCAGG+CGG + chr1_4:1988884-1988903 Msa0143080:CDS 50.0%
CGGGAGAAATACGTACCGTT+TGG + chr1_4:1988904-1988923 Msa0143080:CDS 50.0%
GAGAGGTGGAAATGTGTACG+TGG + chr1_4:1988951-1988970 Msa0143080:CDS 50.0%
!! GATTCATTTTCGGGCAGGGA+GGG + chr1_4:1989017-1989036 Msa0143080:CDS 50.0%
!! ATTCATTTTCGGGCAGGGAG+GGG + chr1_4:1989018-1989037 Msa0143080:CDS 50.0%
!! CAGGATGCAGATTGGTGCTA+AGG + chr1_4:1989056-1989075 Msa0143080:CDS 50.0%
!! GGATGCAGATTGGTGCTAAG+GGG + chr1_4:1989058-1989077 Msa0143080:CDS 50.0%
!! GATGCAGATTGGTGCTAAGG+GGG + chr1_4:1989059-1989078 Msa0143080:CDS 50.0%
! TGGTAGGGAGGAGGTGATTT+TGG + chr1_4:1989128-1989147 Msa0143080:CDS 50.0%
!! GGAGGAGGTGATTTTGGAGA+TGG + chr1_4:1989134-1989153 Msa0143080:CDS 50.0%
AACAACAACGCCTTCTGTCC+CGG - chr1_4:1989165-1989184 None:intergenic 50.0%
! TTGTTGTTGCCAGGTGGAAG+AGG + chr1_4:1989177-1989196 Msa0143080:CDS 50.0%
GCTCCGAAGATTGCTGAGAA+TGG + chr1_4:1989240-1989259 Msa0143080:CDS 50.0%
TATGTGTCCGTGTCCTCTGT+AGG + chr1_4:1989713-1989732 Msa0143080:intron 50.0%
ATTAGTCGCCCACCTTTGGT+GGG - chr1_4:1990007-1990026 None:intergenic 50.0%
GACCTTCCAGGTCTTCTTGA+AGG + chr1_4:1990413-1990432 Msa0143080:CDS 50.0%
CTCCTTCAAGAAGACCTGGA+AGG - chr1_4:1990418-1990437 None:intergenic 50.0%
TGTGCTCCTTCAAGAAGACC+TGG - chr1_4:1990422-1990441 None:intergenic 50.0%
!!! GCACACCGAGGTTTTGGTTT+AGG + chr1_4:1990437-1990456 Msa0143080:CDS 50.0%
!! CACTGAAAGGTGTTCTGCAC+TGG + chr1_4:1990478-1990497 Msa0143080:CDS 50.0%
!! GAAAGGTGTTCTGCACTGGT+AGG + chr1_4:1990482-1990501 Msa0143080:intron 50.0%
AGGGTGAGAAAATGGAGGAG+CGG - chr1_4:1991130-1991149 None:intergenic 50.0%
!! CGTTGATGGTTCATCACCAC+AGG + chr1_4:1991199-1991218 Msa0143080:CDS 50.0%
! ATGAGCGCTGTCAAAAGGGA+AGG + chr1_4:1991389-1991408 Msa0143080:CDS 50.0%
AACCTACCGCCAATGTCATC+TGG - chr1_4:1991733-1991752 None:intergenic 50.0%
TCTCGTGAAACGTGGCGTAA+AGG + chr1_4:1992331-1992350 Msa0143080:CDS 50.0%
GTGAAACGTGGCGTAAAGGA+AGG + chr1_4:1992335-1992354 Msa0143080:CDS 50.0%
GTTCCTGATGGCATGATGCA+AGG + chr1_4:1993250-1993269 Msa0143080:three_prime_UTR 50.0%
AATCACTCACCAGGGACAGC+TGG - chr1_4:1986081-1986100 None:intergenic 55.0%
! TGGAGCACTTGTTGGACCTG+GGG + chr1_4:1986310-1986329 Msa0143080:CDS 55.0%
! ACTTGTTGGACCTGGGGTTG+AGG + chr1_4:1986316-1986335 Msa0143080:CDS 55.0%
GAAACCATGACCTCAACCCC+AGG - chr1_4:1986329-1986348 None:intergenic 55.0%
GTTGTTTGGCCATCCCTCTC+CGG + chr1_4:1987659-1987678 Msa0143080:intron 55.0%
TTGTTTGGCCATCCCTCTCC+GGG + chr1_4:1987660-1987679 Msa0143080:intron 55.0%
!! ATTTGGTGCGGGTGGGTACA+CGG - chr1_4:1988434-1988453 None:intergenic 55.0%
!! GGTTTGGATTTGGTGCGGGT+GGG - chr1_4:1988441-1988460 None:intergenic 55.0%
!! AGGTTTGGATTTGGTGCGGG+TGG - chr1_4:1988442-1988461 None:intergenic 55.0%
CAACACCCACAAGTCCTCAC+CGG + chr1_4:1988479-1988498 Msa0143080:intron 55.0%
CTACACTCGTCTCCCTCTCA+GGG + chr1_4:1988536-1988555 Msa0143080:CDS 55.0%
GGAGGAGGAAGGTGAGAAAG+TGG - chr1_4:1988574-1988593 None:intergenic 55.0%
GAAGGAGAAAGGATTGCCGG+CGG + chr1_4:1988807-1988826 Msa0143080:CDS 55.0%
TCAAAACACCGCATCACCGC+CGG - chr1_4:1988826-1988845 None:intergenic 55.0%
!!! CGGTGATGCGGTGTTTTGAC+CGG + chr1_4:1988827-1988846 Msa0143080:CDS 55.0%
!!! GGTGATGCGGTGTTTTGACC+GGG + chr1_4:1988828-1988847 Msa0143080:CDS 55.0%
ATCTTCGCGAAAGCCGGAGA+CGG + chr1_4:1988856-1988875 Msa0143080:CDS 55.0%
AGACGGAGGGAACGGAAGTA+TGG + chr1_4:1988873-1988892 Msa0143080:CDS 55.0%
! CGGAAGTATGGCATTCAGGC+GGG + chr1_4:1988885-1988904 Msa0143080:CDS 55.0%
GTACCGTTTGGAGGTCCATC+CGG + chr1_4:1988916-1988935 Msa0143080:CDS 55.0%
!! GGATTCATTTTCGGGCAGGG+AGG + chr1_4:1989016-1989035 Msa0143080:CDS 55.0%
GGACAAGGCAGGATGCAGAT+TGG + chr1_4:1989048-1989067 Msa0143080:CDS 55.0%
!! TGGTTGTGAAGGTGCCACCA+GGG + chr1_4:1989088-1989107 Msa0143080:CDS 55.0%
GGTGATTAGGGAGGCTGGTA+GGG + chr1_4:1989113-1989132 Msa0143080:CDS 55.0%
GATGGTGTATCCGGGACAGA+AGG + chr1_4:1989152-1989171 Msa0143080:CDS 55.0%
!! CAGAAGGCGTTGTTGTTGCC+AGG + chr1_4:1989168-1989187 Msa0143080:CDS 55.0%
!! AAGGCGTTGTTGTTGCCAGG+TGG + chr1_4:1989171-1989190 Msa0143080:CDS 55.0%
TTGTTGCCAGGTGGAAGAGG+TGG + chr1_4:1989180-1989199 Msa0143080:CDS 55.0%
TGTTGCCAGGTGGAAGAGGT+GGG + chr1_4:1989181-1989200 Msa0143080:CDS 55.0%
! ACCTTTGGTGGGTCGGAAAC+CGG - chr1_4:1989996-1990015 None:intergenic 55.0%
GTTTCCGACCCACCAAAGGT+GGG + chr1_4:1989996-1990015 Msa0143080:intron 55.0%
! GATTAGTCGCCCACCTTTGG+TGG - chr1_4:1990008-1990027 None:intergenic 55.0%
! CCAGATTAGTCGCCCACCTT+TGG - chr1_4:1990011-1990030 None:intergenic 55.0%
CCAAAGGTGGGCGACTAATC+TGG + chr1_4:1990008-1990027 Msa0143080:intron 55.0%
! CTAATCTGGCTCGTGCGTAG+AGG + chr1_4:1990022-1990041 Msa0143080:intron 55.0%
TAGTGCTGCAAAGCCAGAGG+TGG + chr1_4:1990313-1990332 Msa0143080:CDS 55.0%
!! ATGGTAGTGGCAGACCTTCC+AGG + chr1_4:1990401-1990420 Msa0143080:CDS 55.0%
! CTTCTTGAAGGAGCACACCG+AGG + chr1_4:1990425-1990444 Msa0143080:CDS 55.0%
!! GAAGGAGCACACCGAGGTTT+TGG + chr1_4:1990431-1990450 Msa0143080:CDS 55.0%
! GTTTGGAGCGTAGTTGGGTC+TGG + chr1_4:1991692-1991711 Msa0143080:CDS 55.0%
GTCCAGATGACATTGGCGGT+AGG + chr1_4:1991728-1991747 Msa0143080:CDS 55.0%
GCACCTTGCATCATGCCATC+AGG - chr1_4:1993256-1993275 None:intergenic 55.0%
CGCATGTCGACCAAAGCTGC+TGG - chr1_4:1986227-1986246 None:intergenic 60.0%
TGGACCTGGGGTTGAGGTCA+TGG + chr1_4:1986322-1986341 Msa0143080:CDS 60.0%
TTCCAAGGCAAGCCCGGAGA+GGG - chr1_4:1987675-1987694 None:intergenic 60.0%
ATTCCAAGGCAAGCCCGGAG+AGG - chr1_4:1987676-1987695 None:intergenic 60.0%
GTAGCGAGGGTTGCGTGTGT+TGG - chr1_4:1988412-1988431 None:intergenic 60.0%
CGGTTCCGGTGAGGACTTGT+GGG - chr1_4:1988487-1988506 None:intergenic 60.0%
AGGGAGACGAGTGTAGGTGG+TGG - chr1_4:1988532-1988551 None:intergenic 60.0%
GAGAGGGAGACGAGTGTAGG+TGG - chr1_4:1988535-1988554 None:intergenic 60.0%
CCTGAGAGGGAGACGAGTGT+AGG - chr1_4:1988538-1988557 None:intergenic 60.0%
CCTACACTCGTCTCCCTCTC+AGG + chr1_4:1988535-1988554 Msa0143080:CDS 60.0%
AAGGATTGCCGGCGGTGATG+CGG + chr1_4:1988815-1988834 Msa0143080:CDS 60.0%
AAAGCCGGAGACGGAGGGAA+CGG + chr1_4:1988865-1988884 Msa0143080:CDS 60.0%
ACTTCCGTTCCCTCCGTCTC+CGG - chr1_4:1988872-1988891 None:intergenic 60.0%
CCACCGGATGGACCTCCAAA+CGG - chr1_4:1988922-1988941 None:intergenic 60.0%
CGTTTGGAGGTCCATCCGGT+GGG + chr1_4:1988920-1988939 Msa0143080:CDS 60.0%
GTTTGGAGGTCCATCCGGTG+GGG + chr1_4:1988921-1988940 Msa0143080:CDS 60.0%
GGGAGGGGTTCACATGGACA+AGG + chr1_4:1989033-1989052 Msa0143080:CDS 60.0%
GGGGTTCACATGGACAAGGC+AGG + chr1_4:1989037-1989056 Msa0143080:CDS 60.0%
!! GCAGATTGGTGCTAAGGGGG+AGG + chr1_4:1989062-1989081 Msa0143080:CDS 60.0%
! TGGTGCTAAGGGGGAGGATG+TGG + chr1_4:1989068-1989087 Msa0143080:CDS 60.0%
GGGGGAGGATGTGGTTGTGA+AGG + chr1_4:1989077-1989096 Msa0143080:CDS 60.0%
!! GTGGTTGTGAAGGTGCCACC+AGG + chr1_4:1989087-1989106 Msa0143080:CDS 60.0%
!! TGTGAAGGTGCCACCAGGGA+CGG + chr1_4:1989092-1989111 Msa0143080:CDS 60.0%
TGCCACCAGGGACGGTGATT+AGG + chr1_4:1989100-1989119 Msa0143080:CDS 60.0%
GCCACCAGGGACGGTGATTA+GGG + chr1_4:1989101-1989120 Msa0143080:CDS 60.0%
TCCCTAATCACCGTCCCTGG+TGG - chr1_4:1989105-1989124 None:intergenic 60.0%
ACCAGGGACGGTGATTAGGG+AGG + chr1_4:1989104-1989123 Msa0143080:CDS 60.0%
CGGTGATTAGGGAGGCTGGT+AGG + chr1_4:1989112-1989131 Msa0143080:CDS 60.0%
GATTAGGGAGGCTGGTAGGG+AGG + chr1_4:1989116-1989135 Msa0143080:CDS 60.0%
CAGGTGGAAGAGGTGGGAGA+GGG + chr1_4:1989187-1989206 Msa0143080:CDS 60.0%
! ACCGGTTTCCGACCCACCAA+AGG + chr1_4:1989992-1990011 Msa0143080:intron 60.0%
GGTTTCCGACCCACCAAAGG+TGG + chr1_4:1989995-1990014 Msa0143080:intron 60.0%
! GTGCGTAGAGGCATGCACAC+TGG + chr1_4:1990034-1990053 Msa0143080:intron 60.0%
GGGGATCATCCAGCTGTCCC+TGG + chr1_4:1986069-1986088 Msa0143080:CDS 65.0%
AAGGCAAGCCCGGAGAGGGA+TGG - chr1_4:1987671-1987690 None:intergenic 65.0%
ATCCCTCTCCGGGCTTGCCT+TGG + chr1_4:1987670-1987689 Msa0143080:intron 65.0%
GGGTGGGTACACGGTAGCGA+GGG - chr1_4:1988425-1988444 None:intergenic 65.0%
GCGGTTCCGGTGAGGACTTG+TGG - chr1_4:1988488-1988507 None:intergenic 65.0%
! AGTGTAGGTGGTGGCGTCGC+CGG - chr1_4:1988523-1988542 None:intergenic 65.0%
TTCGCGAAAGCCGGAGACGG+AGG + chr1_4:1988859-1988878 Msa0143080:CDS 65.0%
TCGCGAAAGCCGGAGACGGA+GGG + chr1_4:1988860-1988879 Msa0143080:CDS 65.0%
CCGTTTGGAGGTCCATCCGG+TGG + chr1_4:1988919-1988938 Msa0143080:CDS 65.0%
GTCCATCCGGTGGGGATGGA+GGG + chr1_4:1988929-1988948 Msa0143080:CDS 65.0%
ACCTCTCCCTCCATCCCCAC+CGG - chr1_4:1988938-1988957 None:intergenic 65.0%
GCCTCCCTAATCACCGTCCC+TGG - chr1_4:1989108-1989127 None:intergenic 65.0%
GGGACGGTGATTAGGGAGGC+TGG + chr1_4:1989108-1989127 Msa0143080:CDS 65.0%
TAGGGAGGCTGGTAGGGAGG+AGG + chr1_4:1989119-1989138 Msa0143080:CDS 65.0%
CCTCTCCCACCTCTTCCACC+TGG - chr1_4:1989189-1989208 None:intergenic 65.0%
CCAGGTGGAAGAGGTGGGAG+AGG + chr1_4:1989186-1989205 Msa0143080:CDS 65.0%
! GTCGCCCACCTTTGGTGGGT+CGG - chr1_4:1990003-1990022 None:intergenic 65.0%
CGGGTGGGTACACGGTAGCG+AGG - chr1_4:1988426-1988445 None:intergenic 70.0%
GAGGAGTGGCGGTTCCGGTG+AGG - chr1_4:1988496-1988515 None:intergenic 70.0%
GCGGAGAGGAGTGGCGGTTC+CGG - chr1_4:1988501-1988520 None:intergenic 70.0%
GAACCGCCACTCCTCTCCGC+CGG + chr1_4:1988501-1988520 Msa0143080:CDS 70.0%
GGAGGTCCATCCGGTGGGGA+TGG + chr1_4:1988925-1988944 Msa0143080:CDS 70.0%
GGTCCATCCGGTGGGGATGG+AGG + chr1_4:1988928-1988947 Msa0143080:CDS 70.0%
CTCCCTCCATCCCCACCGGA+TGG - chr1_4:1988934-1988953 None:intergenic 70.0%
TCCGGTGGGGATGGAGGGAG+AGG + chr1_4:1988934-1988953 Msa0143080:CDS 70.0%
GGTGGGGATGGAGGGAGAGG+TGG + chr1_4:1988937-1988956 Msa0143080:CDS 70.0%
CGGGCAGGGAGGGGTTCACA+TGG + chr1_4:1989027-1989046 Msa0143080:CDS 70.0%
TCGCCGGCGGAGAGGAGTGG+CGG - chr1_4:1988507-1988526 None:intergenic 75.0%
! GTAGGTGGTGGCGTCGCCGG+CGG - chr1_4:1988520-1988539 None:intergenic 75.0%
! GCGTCGCCGGCGGAGAGGAG+TGG - chr1_4:1988510-1988529 None:intergenic 80.0%
!! TGGTGGCGTCGCCGGCGGAG+AGG - chr1_4:1988515-1988534 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 1985979 1993628 1985979 ID=Msa0143080;Name=Msa0143080
chr1_4 mRNA 1985979 1993628 1985979 ID=Msa0143080-mRNA-1;Parent=Msa0143080;Name=Msa0143080-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.62|0.44|0.77|0.87|0.77|9|543|758
chr1_4 exon 1985979 1986090 1985979 ID=Msa0143080-mRNA-1:exon:756;Parent=Msa0143080-mRNA-1
chr1_4 exon 1986228 1986600 1986228 ID=Msa0143080-mRNA-1:exon:757;Parent=Msa0143080-mRNA-1
chr1_4 exon 1988492 1989280 1988492 ID=Msa0143080-mRNA-1:exon:758;Parent=Msa0143080-mRNA-1
chr1_4 exon 1990226 1990499 1990226 ID=Msa0143080-mRNA-1:exon:759;Parent=Msa0143080-mRNA-1
chr1_4 exon 1991191 1991482 1991191 ID=Msa0143080-mRNA-1:exon:760;Parent=Msa0143080-mRNA-1
chr1_4 exon 1991588 1991749 1991588 ID=Msa0143080-mRNA-1:exon:761;Parent=Msa0143080-mRNA-1
chr1_4 exon 1992198 1992379 1992198 ID=Msa0143080-mRNA-1:exon:762;Parent=Msa0143080-mRNA-1
chr1_4 exon 1992723 1992868 1992723 ID=Msa0143080-mRNA-1:exon:763;Parent=Msa0143080-mRNA-1
chr1_4 exon 1993139 1993628 1993139 ID=Msa0143080-mRNA-1:exon:764;Parent=Msa0143080-mRNA-1
chr1_4 CDS 1985979 1986090 1985979 ID=Msa0143080-mRNA-1:cds;Parent=Msa0143080-mRNA-1
chr1_4 CDS 1986228 1986600 1986228 ID=Msa0143080-mRNA-1:cds;Parent=Msa0143080-mRNA-1
chr1_4 CDS 1988492 1989280 1988492 ID=Msa0143080-mRNA-1:cds;Parent=Msa0143080-mRNA-1
chr1_4 CDS 1990226 1990499 1990226 ID=Msa0143080-mRNA-1:cds;Parent=Msa0143080-mRNA-1
chr1_4 CDS 1991191 1991482 1991191 ID=Msa0143080-mRNA-1:cds;Parent=Msa0143080-mRNA-1
chr1_4 CDS 1991588 1991749 1991588 ID=Msa0143080-mRNA-1:cds;Parent=Msa0143080-mRNA-1
chr1_4 CDS 1992198 1992379 1992198 ID=Msa0143080-mRNA-1:cds;Parent=Msa0143080-mRNA-1
chr1_4 CDS 1992723 1992815 1992723 ID=Msa0143080-mRNA-1:cds;Parent=Msa0143080-mRNA-1
chr1_4 three_prime_UTR 1992816 1992868 1992816 ID=Msa0143080-mRNA-1:three_prime_utr;Parent=Msa0143080-mRNA-1
chr1_4 three_prime_UTR 1993139 1993628 1993139 ID=Msa0143080-mRNA-1:three_prime_utr;Parent=Msa0143080-mRNA-1
Gene Sequence

>Msa0143080

ATGAAAAATCTGCTATTTGGAACTTACTGTTTGGATGAGGGCCTTTCCTCTGTACAAGACAAGGCAATTGAAATTTTGCATAGGCTTTGTGGGGATCATCCAGCTGTCCCTGCAGCTTTGGTCGACATGCGTATGAAATATGAACTAGTTTCTTGGCTACATGTCATTTGTTACCATTTAGATAAGTCTATTTTTGGAGCACTTGTTGGACCTGGGGTTGAGGTCATGGTTTCAATTCACAATAGCCATCTTGTTGAAATGAATGATTATAATATTGATTATGCTCTGCAGTGGGTGAGGAAGAATACCACTTCCTACAACACCAGATCTGAGGAAGTTGACTGCACTACAACTTTTGAGCAACAATGGAGTACCATGCACAATGACATATACCCCTTCTTGAGTCCTTATTGGAATGACAACTCTCCTTCTAACTTTGTCTTTATTGATGGAGATATCCAAGTTAAAGATGAATGTCGGAGAAATCCTCACCGGAACCGCCACTCCTCTCCGCCGGCGACGCCACCACCTACACTCGTCTCCCTCTCAGGGAAGACTTCTCTTCCACTTTCTCACCTTCCTCCTCCTGAAATCAAACTCTCCGAATCAACACCAATTCACCAATTGCTCCACAAACTCGATAACGATGATGATGAAGAAGAAGAAGAAGAAGAAGAAGAAATCAATGGTAATTTTGAAGGAATTGGTGAGTCTGAAGATGATGAAGAATTGGGGTTTATGGATGAGGAGATTGAAGAAGGTGAAGAATTCTGGAGTGAGGAAACTGAAGAAGAAGAAGTGAAGGAGAAAGGATTGCCGGCGGTGATGCGGTGTTTTGACCGGGCGAAAATCTTCGCGAAAGCCGGAGACGGAGGGAACGGAAGTATGGCATTCAGGCGGGAGAAATACGTACCGTTTGGAGGTCCATCCGGTGGGGATGGAGGGAGAGGTGGAAATGTGTACGTGGAAGTTGATAAAGCGATGAATTCGTTGTTACCGTTTAGGAATGGGATTCATTTTCGGGCAGGGAGGGGTTCACATGGACAAGGCAGGATGCAGATTGGTGCTAAGGGGGAGGATGTGGTTGTGAAGGTGCCACCAGGGACGGTGATTAGGGAGGCTGGTAGGGAGGAGGTGATTTTGGAGATGGTGTATCCGGGACAGAAGGCGTTGTTGTTGCCAGGTGGAAGAGGTGGGAGAGGGAATGCTGCTTTTAAGAGTGGGAGTAATAAAGCTCCGAAGATTGCTGAGAATGGTGAACAAGGTCATGAAATGTGGTTGGAGTTAGAACTTAAGCTGGTTGCAGATGTTGGTATAGTTGGTGCTCCAAATGCAGGGAAGAGTACACTTTTGAGTGTTATTAGTGCTGCAAAGCCAGAGGTGGCAAATTATCCCTTTACAACTTTGCTTCCCAATCTGGGCGTTGTTTCCTTTGACTACGATTCAACTATGGTAGTGGCAGACCTTCCAGGTCTTCTTGAAGGAGCACACCGAGGTTTTGGTTTAGGTCATGAATTTCTGCGACACACTGAAAGGTGTTCTGCACTGATACATGTCGTTGATGGTTCATCACCACAGGCAGATCTTGAGTTTGATGCAGTTCGTCTAGAACTGAAGCTATTTAATCCTGAACTTGCTGAGAAGCCATTTATAGTTGCTTATAACAAAATGGATCTTCCAGAAGCATACGAAAACTGGGAATCCTTCAAGGAAAAGTTGCAATCTCATGGGATCACGCCTTTTTGTATGAGCGCTGTCAAAAGGGAAGGTACTCATGAAGTTATATGCGCTGCTTATGAGCTTTGGCGTAAAAATAAAGAAGACAGGGAGGAATATGAAGATGGACGAGATATGGTAGACATGAATCATATTGCTCATGCGGTACAGAAGCAACGAAGTGCATCCATCAGTGATTTTGAGATTTTTCATGATAGCAGTTCAAATGTTTGGAGCGTAGTTGGGTCTGGATTGCATCGTTTTGTCCAGATGACATTGGCGGTAGGACTAGAATTATGCCTGAAATTTCCACCTCCATTCATGGATAGTCTCATGGAAACCGGTGAATCTTTTAACAGGTACGTTGATTCCGAGAAAAGATTCCAAAATGTCCTTGAGGCTTGTGGTGTATTTAAGTCTCTCGTGAAACGTGGCGTAAAGGAAGGCGACAAAGTGATTGTTGGAGAGATGGAGATGATATGGCATGACTCCTCAAACAAATCTGGTGCATCAAAGATGAAGATGTCCACAGATTCAATTAAATGGCCTGAATGGAAGTAA
Protein sequence

>Msa0143080

MKNLLFGTYCLDEGLSSVQDKAIEILHRLCGDHPAVPAALVDMRMKYELVSWLHVICYHLDKSIFGALVGPGVEVMVSIHNSHLVEMNDYNIDYALQWVRKNTTSYNTRSEEVDCTTTFEQQWSTMHNDIYPFLSPYWNDNSPSNFVFIDGDIQVKDECRRNPHRNRHSSPPATPPPTLVSLSGKTSLPLSHLPPPEIKLSESTPIHQLLHKLDNDDDEEEEEEEEEINGNFEGIGESEDDEELGFMDEEIEEGEEFWSEETEEEEVKEKGLPAVMRCFDRAKIFAKAGDGGNGSMAFRREKYVPFGGPSGGDGGRGGNVYVEVDKAMNSLLPFRNGIHFRAGRGSHGQGRMQIGAKGEDVVVKVPPGTVIREAGREEVILEMVYPGQKALLLPGGRGGRGNAAFKSGSNKAPKIAENGEQGHEMWLELELKLVADVGIVGAPNAGKSTLLSVISAAKPEVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALIHVVDGSSPQADLEFDAVRLELKLFNPELAEKPFIVAYNKMDLPEAYENWESFKEKLQSHGITPFCMSAVKREGTHEVICAAYELWRKNKEDREEYEDGRDMVDMNHIAHAVQKQRSASISDFEIFHDSSSNVWSVVGSGLHRFVQMTLAVGLELCLKFPPPFMDSLMETGESFNRYVDSEKRFQNVLEACGVFKSLVKRGVKEGDKVIVGEMEMIWHDSSNKSGASKMKMSTDSIKWPEWK*