AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1092820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1092820 MtrunA17_Chr7g0228211 98.758 483 6 0 1 483 1 483 0.0 973
Msa1092820 MtrunA17_Chr1g0179021 54.060 431 193 2 3 428 4 434 3.27e-166 476
Msa1092820 MtrunA17_Chr8g0387461 44.575 424 214 9 7 418 62 476 1.75e-112 341
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1092820 AT3G27820.1 74.847 489 116 4 1 483 1 488 0.0 720
Msa1092820 AT3G52880.1 54.292 431 192 2 3 428 4 434 2.91e-164 471
Msa1092820 AT3G52880.2 50.540 463 192 3 3 428 4 466 7.49e-157 454
Msa1092820 AT5G03630.1 52.668 431 199 2 3 428 5 435 1.70e-153 444
Msa1092820 AT3G09940.1 46.472 411 214 3 22 426 24 434 3.91e-133 392
Msa1092820 AT3G09940.2 45.985 411 208 5 22 426 24 426 1.99e-126 375
Msa1092820 AT1G63940.1 43.392 401 207 8 23 412 72 463 4.76e-116 350
Msa1092820 AT1G63940.2 43.392 401 207 8 23 412 79 470 8.07e-116 350
Msa1092820 AT1G63940.4 43.142 401 204 10 23 412 72 459 9.92e-112 339
Msa1092820 AT1G63940.3 45.245 347 173 7 23 358 72 412 1.38e-103 316

Find 137 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCGTGAATTCGAAATTA+AGG 0.191103 7_3:+10628381 None:intergenic
GCCGCATTTGCATATTATTA+TGG 0.194750 7_3:-10622337 Msa1092820:CDS
TCATAGTAGCTTGCAATCTT+TGG 0.199998 7_3:+10624002 None:intergenic
GTTGGGGAAGTTGTCTATTA+TGG 0.234121 7_3:-10622670 Msa1092820:CDS
TGCTTACTGCAATGTTCTTC+TGG 0.235386 7_3:+10624186 None:intergenic
GCTTTGAAGCTTGAAGAATT+TGG 0.241193 7_3:-10624390 Msa1092820:CDS
CATAGTAGCTTGCAATCTTT+GGG 0.242144 7_3:+10624003 None:intergenic
AATGAGAACTTTGTAACTTA+TGG 0.250984 7_3:+10624801 None:intergenic
CTTTGAAGCTTGAAGAATTT+GGG 0.252024 7_3:-10624389 Msa1092820:CDS
GGAATAACGAACGAAGAAAA+TGG 0.252181 7_3:-10628305 Msa1092820:exon
AAAGGTGGAATCAAAGTAAA+TGG 0.278964 7_3:-10622922 Msa1092820:CDS
CCTTCAAACAGACCTGTATT+TGG 0.291945 7_3:+10622961 None:intergenic
CATGGAGTGTGCGGCATCTT+TGG 0.297042 7_3:-10624241 Msa1092820:CDS
TCAGGAGTTGAGTTAGTTCT+TGG 0.301574 7_3:-10624883 Msa1092820:intron
GGAGCGAGTGGTTTCGTATA+AGG 0.311166 7_3:+10628419 None:intergenic
AAAACACTATTAACAACAAC+CGG 0.327095 7_3:-10624829 Msa1092820:CDS
ACATGCTGTTTCTGCCATAA+TGG 0.329299 7_3:-10622779 Msa1092820:CDS
TAGCACATTTGGAGCATATT+GGG 0.336344 7_3:-10622629 Msa1092820:CDS
ACCATGTTCTCTATACCATT+TGG 0.345910 7_3:+10626019 None:intergenic
GTCCACAGATATCTTTGTTC+CGG 0.347418 7_3:+10623011 None:intergenic
CTTCTTTAGTTCCACCTTCA+AGG 0.352026 7_3:+10622578 None:intergenic
CCATGTTCTCTATACCATTT+GGG 0.367359 7_3:+10626020 None:intergenic
CTTAATGCAGGTCTTTCATA+AGG 0.374407 7_3:+10626671 None:intergenic
GCATTTCCAGTCAAAGCATT+TGG 0.376117 7_3:-10622850 Msa1092820:CDS
CTTGAAGAATTTGGGGTGAA+TGG 0.381404 7_3:-10624381 Msa1092820:CDS
TCAGCCGCAGGTAGCACATT+TGG 0.384502 7_3:-10622640 Msa1092820:CDS
GTAGCACATTTGGAGCATAT+TGG 0.386547 7_3:-10622630 Msa1092820:CDS
GGTTACCGATTTGTGGTTAA+GGG 0.390157 7_3:-10622280 Msa1092820:three_prime_UTR
GGGATATAGCAGATGCAAAT+AGG 0.390158 7_3:-10624329 Msa1092820:CDS
GTTGTTGGAGCTTTCCTTGA+AGG 0.393109 7_3:-10622592 Msa1092820:CDS
TCATTGTTGCCACTGGTGCT+CGG 0.394744 7_3:-10624783 Msa1092820:CDS
AGAATTGTAATCCAGTGAAT+TGG 0.395851 7_3:+10622209 None:intergenic
AAGAGGAGTAAATTTCGTTA+AGG 0.396179 7_3:-10623964 Msa1092820:CDS
TATCGTGAATTCGAAATTAA+GGG 0.399317 7_3:+10628382 None:intergenic
AGGTTACCGATTTGTGGTTA+AGG 0.399510 7_3:-10622281 Msa1092820:three_prime_UTR
ATGTAAAAGAGATTATAATA+TGG 0.400295 7_3:+10622068 None:intergenic
GTTGAGTTAGTTCTTGGAAC+TGG 0.403454 7_3:-10624877 Msa1092820:CDS
AGAGGAGTAAATTTCGTTAA+GGG 0.404321 7_3:-10623963 Msa1092820:CDS
TCAGCCAAGTCTTCAATTGC+TGG 0.405203 7_3:+10622520 None:intergenic
GCGTTCGTTTACGTGATTCT+TGG 0.410893 7_3:-10628277 Msa1092820:CDS
CAGAAAATGTATGTTACTTA+CGG 0.411422 7_3:-10624350 Msa1092820:CDS
AACAGCTCAGTCTATGCTAT+TGG 0.424303 7_3:-10622883 Msa1092820:CDS
GTAGCATGCCAAGCATATAA+TGG 0.424570 7_3:+10622388 None:intergenic
CTGAGAAGGTTACCGATTTG+TGG 0.425195 7_3:-10622287 Msa1092820:three_prime_UTR
TGAGTTGGAGAGGCAAGGTT+TGG 0.427202 7_3:-10622500 Msa1092820:CDS
TGGAAAGACCATTATATGCT+TGG 0.427257 7_3:-10622396 Msa1092820:CDS
TATGCTTGGCATGCTACAGC+TGG 0.429671 7_3:-10622382 Msa1092820:CDS
CATTGTTGCCACTGGTGCTC+GGG 0.432006 7_3:-10624782 Msa1092820:intron
GCTTACTGCAATGTTCTTCT+GGG 0.434566 7_3:+10624187 None:intergenic
GACATGGTTGTAGTGGGAAT+TGG 0.437394 7_3:-10622991 Msa1092820:CDS
GTTTGAAGGTCAACTTACTT+TGG 0.444751 7_3:-10622947 Msa1092820:CDS
GTAAACAAGGGTCATGTTGT+TGG 0.448592 7_3:-10622607 Msa1092820:CDS
TAACCTAGTGACCTTGGCTA+TGG 0.449349 7_3:+10622546 None:intergenic
ACAGCTGTTAATCTTAAAAC+CGG 0.453284 7_3:-10623030 Msa1092820:CDS
CCATCCTTTCATACATGTGT+TGG 0.457722 7_3:-10626065 Msa1092820:CDS
CCAGAGTCTTCACTCTGTCT+TGG 0.463151 7_3:-10622711 Msa1092820:CDS
AGTGCTATTCAATCTTCTCC+TGG 0.467772 7_3:-10624300 Msa1092820:CDS
AGAAAATGTATGTTACTTAC+GGG 0.473505 7_3:-10624349 Msa1092820:CDS
AAATATCCTTTGCTTAATGC+AGG 0.475259 7_3:+10626659 None:intergenic
TTGTATCCTATCCAATTCAC+TGG 0.476259 7_3:-10622220 Msa1092820:three_prime_UTR
AATTGAAGACTTGGCTGAGT+TGG 0.476573 7_3:-10622515 Msa1092820:CDS
GAATAACGAACGAAGAAAAT+GGG 0.481152 7_3:-10628304 Msa1092820:exon
TGTTTCTGCCATAATGGAAC+CGG 0.481633 7_3:-10622773 Msa1092820:CDS
GTGCTGCTGCTAACCTCAAT+TGG 0.481927 7_3:+10622433 None:intergenic
AAGCATTTGGTGAAATGCGC+AGG 0.483899 7_3:-10622837 Msa1092820:CDS
AAAGTTCTCATTGTTGCCAC+TGG 0.484993 7_3:-10624790 Msa1092820:CDS
ATTGGTGGTGGTGATGCCAC+TGG 0.486890 7_3:+10622451 None:intergenic
TAGCCAAGGTCACTAGGTTA+AGG 0.488657 7_3:-10622543 Msa1092820:CDS
ATGCTTGGCATGCTACAGCT+GGG 0.494794 7_3:-10622381 Msa1092820:CDS
GGAGGGAATGCCATTGTCAT+TGG 0.497388 7_3:-10624279 Msa1092820:CDS
GGTCAACTTACTTTGGAGAA+AGG 0.502678 7_3:-10622940 Msa1092820:CDS
AAGGCCAGCAATTGAAGACT+TGG 0.503738 7_3:-10622524 Msa1092820:CDS
ATTTCACCAAATGCTTTGAC+TGG 0.507490 7_3:+10622844 None:intergenic
GGGAATGCCATTGTCATTGG+TGG 0.513000 7_3:-10624276 Msa1092820:CDS
AATGATACAAAGTTCACCAT+TGG 0.513547 7_3:+10628201 None:intergenic
CTTGGTGGTGGTGTATCAGC+TGG 0.514363 7_3:-10628259 Msa1092820:CDS
TTCGTTTACGTGATTCTTGG+TGG 0.515424 7_3:-10628274 Msa1092820:CDS
TTTGTAACTTATGGTTTCCC+CGG 0.519828 7_3:+10624810 None:intergenic
CCAAATACAGGTCTGTTTGA+AGG 0.523257 7_3:-10622961 Msa1092820:CDS
TGGTCTTTCCAAAAGTAAAA+CGG 0.523433 7_3:+10622408 None:intergenic
TACATGTGTTGGCGCAAATG+AGG 0.525033 7_3:-10626054 Msa1092820:CDS
ATGACAATGGCATTCCCTCC+AGG 0.527956 7_3:+10624282 None:intergenic
CTGCTAACCTCAATTGGTGG+TGG 0.528850 7_3:+10622439 None:intergenic
AGGAAAGGCTAACTCCCAAA+TGG 0.530316 7_3:-10626034 Msa1092820:CDS
CCCAAATGGTATAGAGAACA+TGG 0.531344 7_3:-10626020 Msa1092820:intron
TGAAGCCCTTAACCACAAAT+CGG 0.533204 7_3:+10622275 None:intergenic
TGGCCTTAACCTAGTGACCT+TGG 0.536164 7_3:+10622540 None:intergenic
ATTGGAATACGACCAAATAC+AGG 0.545458 7_3:-10622973 Msa1092820:CDS
GGCATCACCACCACCAATTG+AGG 0.547466 7_3:-10622446 Msa1092820:CDS
GTTGGAGCTTTCCTTGAAGG+TGG 0.550130 7_3:-10622589 Msa1092820:CDS
TGGGAATAGCTTCTGAATGA+TGG 0.550843 7_3:+10622126 None:intergenic
TTCACGATAATATATAGATA+AGG 0.552337 7_3:-10628368 Msa1092820:five_prime_UTR
GTCATTGGTGGTGGATACAT+TGG 0.553697 7_3:-10624264 Msa1092820:CDS
AAGCCATAGCCAAGGTCACT+AGG 0.553819 7_3:-10622549 Msa1092820:CDS
CAACTTACTTTGGAGAAAGG+TGG 0.555274 7_3:-10622937 Msa1092820:CDS
ATCTGTGGACATGGTTGTAG+TGG 0.557175 7_3:-10622998 Msa1092820:CDS
GAAGAATATTATAAATCAAG+AGG 0.558433 7_3:-10623981 Msa1092820:CDS
TTGGCTGAGTTGGAGAGGCA+AGG 0.563958 7_3:-10622505 Msa1092820:CDS
GTTTACGTGATTCTTGGTGG+TGG 0.567807 7_3:-10628271 Msa1092820:CDS
TGTAATCCAGTGAATTGGAT+AGG 0.569856 7_3:+10622214 None:intergenic
CTGCTGCTAACCTCAATTGG+TGG 0.574363 7_3:+10622436 None:intergenic
CAATAAAATCAGTGTAACAA+TGG 0.576465 7_3:-10624214 Msa1092820:CDS
AATGCCATTGTCATTGGTGG+TGG 0.576779 7_3:-10624273 Msa1092820:CDS
TTTGAAGCTTGAAGAATTTG+GGG 0.577488 7_3:-10624388 Msa1092820:CDS
CCAACACATGTATGAAAGGA+TGG 0.577689 7_3:+10626065 None:intergenic
TATGGAGATCTCTCAGCCGC+AGG 0.578508 7_3:-10622652 Msa1092820:CDS
TCCATAATAATATGCAAATG+CGG 0.578899 7_3:+10622336 None:intergenic
AAGACTTGGCTGAGTTGGAG+AGG 0.580952 7_3:-10622510 Msa1092820:CDS
AAAGGATATTTGCTTCCAGA+AGG 0.580991 7_3:-10626647 Msa1092820:intron
GTTAAACGTGGTGTTTCCAA+TGG 0.585015 7_3:-10628217 Msa1092820:CDS
TGGAGCATATTGGGTAAACA+AGG 0.586722 7_3:-10622620 Msa1092820:CDS
TGCGCCAACACATGTATGAA+AGG 0.589333 7_3:+10626061 None:intergenic
CTCAGAAGTTTCACCATCTG+CGG 0.591356 7_3:+10622305 None:intergenic
GAAAGACCTGCATTAAGCAA+AGG 0.593530 7_3:-10626665 Msa1092820:CDS
CCAAGACAGAGTGAAGACTC+TGG 0.595322 7_3:+10622711 None:intergenic
AGAGTATGAAGCCATAGCCA+AGG 0.597817 7_3:-10622557 Msa1092820:CDS
TTGTTATGTTGTGTATGTGA+AGG 0.602299 7_3:-10628326 Msa1092820:five_prime_UTR
TGTAACCTACAGCTGCTGCT+CGG 0.603323 7_3:-10626091 Msa1092820:intron
CGAGTGGTTTCGTATAAGGA+AGG 0.610806 7_3:+10628423 None:intergenic
CTATTCAATCTTCTCCTGGA+GGG 0.613579 7_3:-10624296 Msa1092820:CDS
AACAAAGATATCTGTGGACA+TGG 0.616089 7_3:-10623007 Msa1092820:CDS
AGATGGTGAAACTTCTGAGA+AGG 0.620320 7_3:-10622301 Msa1092820:exon
GTATCCACCACCAATGACAA+TGG 0.625212 7_3:+10624269 None:intergenic
AAACACTATTAACAACAACC+GGG 0.625250 7_3:-10624828 Msa1092820:CDS
GCTCTTGAATTTGTTAAACG+TGG 0.627019 7_3:-10628229 Msa1092820:CDS
GTGTTGGCGCAAATGAGGAA+AGG 0.627684 7_3:-10626049 Msa1092820:CDS
ATAGTAGCTTGCAATCTTTG+GGG 0.641121 7_3:+10624004 None:intergenic
AACCGGAACAAAGATATCTG+TGG 0.646222 7_3:-10623013 Msa1092820:CDS
TGCTCCAAATGTGCTACCTG+CGG 0.650116 7_3:+10622636 None:intergenic
TGGTGGTGGATACATTGGCA+TGG 0.653480 7_3:-10624259 Msa1092820:CDS
TCTGTGGACATGGTTGTAGT+GGG 0.657144 7_3:-10622997 Msa1092820:CDS
TGCTTGGCATGCTACAGCTG+GGG 0.662770 7_3:-10622380 Msa1092820:CDS
AACACTATTAACAACAACCG+GGG 0.664122 7_3:-10624827 Msa1092820:CDS
GGAGCATATTGGGTAAACAA+GGG 0.674022 7_3:-10622619 Msa1092820:CDS
GCTATTCAATCTTCTCCTGG+AGG 0.679148 7_3:-10624297 Msa1092820:CDS
ATACATTGGCATGGAGTGTG+CGG 0.684973 7_3:-10624250 Msa1092820:CDS
TACAGTTAGTGAGAAACCAG+TGG 0.701871 7_3:-10622467 Msa1092820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTAGATTTTTGTTTA+TGG - chr7_3:10623641-10623660 Msa1092820:intron 10.0%
!! AATAAATAACATAAAAGAAT+TGG + chr7_3:10623933-10623952 None:intergenic 10.0%
!! GTATTTCATATAAAATAATA+AGG + chr7_3:10625444-10625463 None:intergenic 10.0%
!!! TATTATTTTATATGAAATAC+CGG - chr7_3:10625444-10625463 Msa1092820:intron 10.0%
!!! TATATAGATATTTTATCTCA+TGG - chr7_3:10623096-10623115 Msa1092820:intron 15.0%
!!! ATATAGATATTTTATCTCAT+GGG - chr7_3:10623097-10623116 Msa1092820:intron 15.0%
!! AAATAAGTTATAAATCTTCA+GGG + chr7_3:10623321-10623340 None:intergenic 15.0%
!! AAAATAAGTTATAAATCTTC+AGG + chr7_3:10623322-10623341 None:intergenic 15.0%
!! TTATATAGTCAATTACTTTA+TGG - chr7_3:10623347-10623366 Msa1092820:intron 15.0%
!! AATATATAAATGTTTATCTC+AGG - chr7_3:10623790-10623809 Msa1092820:intron 15.0%
!! TAATATATAAACTTCAATGT+GGG - chr7_3:10624115-10624134 Msa1092820:intron 15.0%
!!! ATTAATATGTTTTAACCAAA+GGG + chr7_3:10624564-10624583 None:intergenic 15.0%
!!! AATTAATATGTTTTAACCAA+AGG + chr7_3:10624565-10624584 None:intergenic 15.0%
!!! AAACTATTTAACACATTTTT+AGG + chr7_3:10624751-10624770 None:intergenic 15.0%
!!! AATATGTAAATGTTTTTGAT+AGG - chr7_3:10625223-10625242 Msa1092820:intron 15.0%
!!! ATTATTTTATATGAAATACC+GGG - chr7_3:10625445-10625464 Msa1092820:intron 15.0%
!!! TTTTCTATATTGTAATTCAA+AGG - chr7_3:10625537-10625556 Msa1092820:intron 15.0%
!!! AATAGTTTCATGTATTTTAA+GGG + chr7_3:10625920-10625939 None:intergenic 15.0%
!!! TAATAGTTTCATGTATTTTA+AGG + chr7_3:10625921-10625940 None:intergenic 15.0%
!! TTAAAATACATGAAACTATT+AGG - chr7_3:10625920-10625939 Msa1092820:intron 15.0%
!! ATGTAAAAGAGATTATAATA+TGG + chr7_3:10628424-10628443 None:intergenic 15.0%
!! TTCACGATAATATATAGATA+AGG - chr7_3:10622121-10622140 Msa1092820:three_prime_UTR 20.0%
!!! TTTTTTTGAATGTTGTGTAT+TGG - chr7_3:10622358-10622377 Msa1092820:CDS 20.0%
!!! TTTTTTGAATGTTGTGTATT+GGG - chr7_3:10622359-10622378 Msa1092820:CDS 20.0%
!!! TCATTCTTTTAGATTATTAC+CGG + chr7_3:10622489-10622508 None:intergenic 20.0%
!! AAGAATGAATTAATTGTGTA+TGG - chr7_3:10622501-10622520 Msa1092820:CDS 20.0%
!!! TATCTTTTCTATTTGAAACT+TGG - chr7_3:10622977-10622996 Msa1092820:CDS 20.0%
!!! ATCTTTTCTATTTGAAACTT+GGG - chr7_3:10622978-10622997 Msa1092820:CDS 20.0%
!! AGAACAACAATAAAACATAA+AGG + chr7_3:10623157-10623176 None:intergenic 20.0%
!! AATAAGTTATAAATCTTCAG+GGG + chr7_3:10623320-10623339 None:intergenic 20.0%
!!! TTATCTTCTTTGTTTTGTAA+TGG - chr7_3:10623765-10623784 Msa1092820:intron 20.0%
!! ATAACATAAAAGAATTGGAT+TGG + chr7_3:10623928-10623947 None:intergenic 20.0%
!! AACAATCCAATTCTTTAATT+TGG - chr7_3:10623963-10623982 Msa1092820:CDS 20.0%
!!! CAATTCTTTAATTTGGAATT+GGG - chr7_3:10623970-10623989 Msa1092820:CDS 20.0%
!! CTAATATATAAACTTCAATG+TGG - chr7_3:10624114-10624133 Msa1092820:intron 20.0%
!! AATATATAAACTTCAATGTG+GGG - chr7_3:10624116-10624135 Msa1092820:intron 20.0%
!! GTAAATTTGAAAGATTTAAC+TGG - chr7_3:10624231-10624250 Msa1092820:CDS 20.0%
!!! TTTCTATTTTAGAGACAATA+AGG + chr7_3:10624346-10624365 None:intergenic 20.0%
!!! AACATATTAATTGCTTTTGT+TGG - chr7_3:10624573-10624592 Msa1092820:intron 20.0%
!! CAATCGGAAATAATTAATTT+AGG + chr7_3:10624672-10624691 None:intergenic 20.0%
!!! AAATTGTTTTACTGATTTTC+AGG - chr7_3:10624705-10624724 Msa1092820:intron 20.0%
!! TGGTGAAAATTAATGAATAA+AGG - chr7_3:10624807-10624826 Msa1092820:CDS 20.0%
!! AATATATATCCGACATTTAA+TGG - chr7_3:10624937-10624956 Msa1092820:intron 20.0%
!! AGAAAATAACTGATAAAACA+TGG + chr7_3:10624998-10625017 None:intergenic 20.0%
!!! AAATCAGTTTTACATAGATA+AGG + chr7_3:10625056-10625075 None:intergenic 20.0%
!!! AATGTTTTTGATAGGTAAAT+AGG - chr7_3:10625231-10625250 Msa1092820:intron 20.0%
!! ATAGGTAAATAGGTAAATAT+AGG - chr7_3:10625241-10625260 Msa1092820:intron 20.0%
!! AAAAAAAATGAAAGAACCTT+TGG - chr7_3:10625825-10625844 Msa1092820:intron 20.0%
!! ACGTATTATGTTAATAAGAA+CGG + chr7_3:10625981-10626000 None:intergenic 20.0%
!! TTCTTATTAACATAATACGT+GGG - chr7_3:10625981-10626000 Msa1092820:intron 20.0%
!!! AATTTTATTGTCTGTGTATA+TGG - chr7_3:10626335-10626354 Msa1092820:intron 20.0%
!!! ATTTTATTGTCTGTGTATAT+GGG - chr7_3:10626336-10626355 Msa1092820:intron 20.0%
!!! TTGATGGGTATTTTATATAT+TGG - chr7_3:10626434-10626453 Msa1092820:intron 20.0%
!!! ATATTGGATTTATTTTACAG+TGG - chr7_3:10626450-10626469 Msa1092820:intron 20.0%
!! GAAGAATATTATAAATCAAG+AGG - chr7_3:10626508-10626527 Msa1092820:intron 20.0%
!!! CTTATTTAGAAGAGTTTTTT+TGG + chr7_3:10627000-10627019 None:intergenic 20.0%
!! CAAAAAAACTCTTCTAAATA+AGG - chr7_3:10626998-10627017 Msa1092820:intron 20.0%
!!! ATTTTTTTGAAATGCCATTA+AGG + chr7_3:10627118-10627137 None:intergenic 20.0%
!! AATGGCATTTCAAAAAAATT+TGG - chr7_3:10627119-10627138 Msa1092820:intron 20.0%
!! ACATAATAGTATTACATGAT+AGG - chr7_3:10627153-10627172 Msa1092820:intron 20.0%
!! ATTCAAAATGAGATAATTAG+AGG - chr7_3:10627265-10627284 Msa1092820:intron 20.0%
! TATCGTGAATTCGAAATTAA+GGG + chr7_3:10622110-10622129 None:intergenic 25.0%
! TTATCGTGAATTCGAAATTA+AGG + chr7_3:10622111-10622130 None:intergenic 25.0%
!! ACTCTTTATAAAGTCTTATC+AGG - chr7_3:10622949-10622968 Msa1092820:CDS 25.0%
! ATATAAAAGTGATTGAATGC+AGG - chr7_3:10623257-10623276 Msa1092820:intron 25.0%
! TATAAAAGTGATTGAATGCA+GGG - chr7_3:10623258-10623277 Msa1092820:intron 25.0%
! TTTGCGTAAAAATAGTAGTT+AGG - chr7_3:10623402-10623421 Msa1092820:intron 25.0%
! TTGCGTAAAAATAGTAGTTA+GGG - chr7_3:10623403-10623422 Msa1092820:intron 25.0%
!! TTTTTGTACTGAACATAGAA+AGG - chr7_3:10623548-10623567 Msa1092820:intron 25.0%
!! TTTTGTACTGAACATAGAAA+GGG - chr7_3:10623549-10623568 Msa1092820:intron 25.0%
! AATCAGGAATCAAAATTCAA+GGG + chr7_3:10623669-10623688 None:intergenic 25.0%
! TAATCAGGAATCAAAATTCA+AGG + chr7_3:10623670-10623689 None:intergenic 25.0%
! CCAATTCCAAATTAAAGAAT+TGG + chr7_3:10623972-10623991 None:intergenic 25.0%
!!! CCAATTCTTTAATTTGGAAT+TGG - chr7_3:10623969-10623988 Msa1092820:CDS 25.0%
!! AATTTTGCTCTTTGGTTATA+TGG - chr7_3:10624001-10624020 Msa1092820:CDS 25.0%
! ACAAGCTATATTACTTAGTT+GGG - chr7_3:10624064-10624083 Msa1092820:intron 25.0%
! AATTCTATATTTGAACAACG+AGG + chr7_3:10624302-10624321 None:intergenic 25.0%
! TAGAAAGTTTGTAGAATTTC+TGG - chr7_3:10624360-10624379 Msa1092820:CDS 25.0%
! AGGCTAACTAAATTAATTCA+TGG + chr7_3:10624529-10624548 None:intergenic 25.0%
! TCGGAAATAATTAATTTAGG+TGG + chr7_3:10624669-10624688 None:intergenic 25.0%
!! TTTTCCAATGATGTTTCAAT+CGG + chr7_3:10624688-10624707 None:intergenic 25.0%
!! ATAAATTTTAAACGTGTTGC+CGG + chr7_3:10624845-10624864 None:intergenic 25.0%
! AAGAGCTAAATTAAATGCAT+TGG - chr7_3:10625149-10625168 Msa1092820:intron 25.0%
! CATGAATATCATTACCAATT+GGG + chr7_3:10625193-10625212 None:intergenic 25.0%
! ACATGAATATCATTACCAAT+TGG + chr7_3:10625194-10625213 None:intergenic 25.0%
! TCTATATTGTAATTCAAAGG+AGG - chr7_3:10625540-10625559 Msa1092820:intron 25.0%
! CTATATTGTAATTCAAAGGA+GGG - chr7_3:10625541-10625560 Msa1092820:intron 25.0%
! AAAACACTATTAACAACAAC+CGG - chr7_3:10625660-10625679 Msa1092820:intron 25.0%
! AATGAGAACTTTGTAACTTA+TGG + chr7_3:10625691-10625710 None:intergenic 25.0%
!!! CTTGTAACGTTCTTTTTTAT+TGG - chr7_3:10625865-10625884 Msa1092820:intron 25.0%
! GTTCTTATTAACATAATACG+TGG - chr7_3:10625980-10625999 Msa1092820:intron 25.0%
!! CAGAAAATGTATGTTACTTA+CGG - chr7_3:10626139-10626158 Msa1092820:intron 25.0%
!! AGAAAATGTATGTTACTTAC+GGG - chr7_3:10626140-10626159 Msa1092820:intron 25.0%
! CAATAAAATCAGTGTAACAA+TGG - chr7_3:10626275-10626294 Msa1092820:intron 25.0%
!!! GGTACATCAATTTTTTTTGT+TGG - chr7_3:10626588-10626607 Msa1092820:intron 25.0%
!! ATTTATCCTCTAGGAATATT+TGG - chr7_3:10626613-10626632 Msa1092820:intron 25.0%
!!! AAAACTCTAAGACTTAGTTT+GGG - chr7_3:10626720-10626739 Msa1092820:intron 25.0%
! GAACTTAAAATATGCATTGA+AGG - chr7_3:10626875-10626894 Msa1092820:intron 25.0%
!!! TTAAGAGTATTAAAGCGATA+CGG + chr7_3:10626940-10626959 None:intergenic 25.0%
!! TAACAAAAGGCTTTTATTCT+AGG + chr7_3:10627193-10627212 None:intergenic 25.0%
!! AAAGTTCTGATCATAACAAA+AGG + chr7_3:10627206-10627225 None:intergenic 25.0%
!! TTTTGTAATTTCTAAACCAG+TGG - chr7_3:10627303-10627322 Msa1092820:intron 25.0%
!! TTATAGCTTGATTTGATCAA+AGG + chr7_3:10627410-10627429 None:intergenic 25.0%
!!! AGTTTTTTGGTGATAATGTT+GGG - chr7_3:10627802-10627821 Msa1092820:intron 25.0%
! TCCATAATAATATGCAAATG+CGG + chr7_3:10628156-10628175 None:intergenic 25.0%
!!! TTAAGGGTGCTGAATTTTTT+GGG + chr7_3:10622094-10622113 None:intergenic 30.0%
!!! ATTAAGGGTGCTGAATTTTT+TGG + chr7_3:10622095-10622114 None:intergenic 30.0%
TTGTTATGTTGTGTATGTGA+AGG - chr7_3:10622163-10622182 Msa1092820:three_prime_UTR 30.0%
GAATAACGAACGAAGAAAAT+GGG - chr7_3:10622185-10622204 Msa1092820:three_prime_UTR 30.0%
AATGATACAAAGTTCACCAT+TGG + chr7_3:10622291-10622310 None:intergenic 30.0%
TTTAGTGACTAGAGAGAATA+AGG - chr7_3:10622567-10622586 Msa1092820:CDS 30.0%
GAGAAAGTGAGATAATTCAA+TGG - chr7_3:10622693-10622712 Msa1092820:CDS 30.0%
ATAATTCAATGGAATCGTGT+CGG - chr7_3:10622704-10622723 Msa1092820:CDS 30.0%
! AGAAATGGTGGTTTTTATGT+TGG - chr7_3:10622879-10622898 Msa1092820:CDS 30.0%
! GAAATGGTGGTTTTTATGTT+GGG - chr7_3:10622880-10622899 Msa1092820:CDS 30.0%
! TCATTCGATATGAAGTATCA+AGG - chr7_3:10623070-10623089 Msa1092820:intron 30.0%
! TTGTGTTTAGAGTTAGGTTT+GGG + chr7_3:10623196-10623215 None:intergenic 30.0%
GTAAAAATAGTAGTTAGGGA+AGG - chr7_3:10623407-10623426 Msa1092820:intron 30.0%
! GAGAGATGAAATTTGAGATT+TGG - chr7_3:10623499-10623518 Msa1092820:intron 30.0%
! ATGAAATTTGAGATTTGGAG+TGG - chr7_3:10623504-10623523 Msa1092820:intron 30.0%
!!! AGTAGTTTGGTGGTTTTTTT+AGG + chr7_3:10623575-10623594 None:intergenic 30.0%
AAAAAAACCACCAAACTACT+AGG - chr7_3:10623575-10623594 Msa1092820:intron 30.0%
AAAAAACCACCAAACTACTA+GGG - chr7_3:10623576-10623595 Msa1092820:intron 30.0%
ATCAGGAATCAAAATTCAAG+GGG + chr7_3:10623668-10623687 None:intergenic 30.0%
AAATATCCTTTGCTTAATGC+AGG + chr7_3:10623833-10623852 None:intergenic 30.0%
! TCGAATTGAATTTTGCTCTT+TGG - chr7_3:10623993-10624012 Msa1092820:CDS 30.0%
ACAAGTCAATGAAGTTAAGA+TGG + chr7_3:10624027-10624046 None:intergenic 30.0%
GACAAGCTATATTACTTAGT+TGG - chr7_3:10624063-10624082 Msa1092820:intron 30.0%
CAAGCTATATTACTTAGTTG+GGG - chr7_3:10624065-10624084 Msa1092820:intron 30.0%
AAGCTATATTACTTAGTTGG+GGG - chr7_3:10624066-10624085 Msa1092820:intron 30.0%
! GGGTAATTTTGTATGTTGTT+GGG - chr7_3:10624087-10624106 Msa1092820:intron 30.0%
! GGTAATTTTGTATGTTGTTG+GGG - chr7_3:10624088-10624107 Msa1092820:intron 30.0%
! CTCTTGATATTTGGTTGTTT+TGG - chr7_3:10624139-10624158 Msa1092820:intron 30.0%
TATTGATGAAGAAGTAAACC+AGG - chr7_3:10624183-10624202 Msa1092820:intron 30.0%
ATTGATGAAGAAGTAAACCA+GGG - chr7_3:10624184-10624203 Msa1092820:intron 30.0%
TCATTATCAATTAATCACCC+TGG + chr7_3:10624204-10624223 None:intergenic 30.0%
AAAGATTTAACTGGTAGCTT+AGG - chr7_3:10624240-10624259 Msa1092820:CDS 30.0%
CTTAGGATTGTAGTTGAATT+AGG - chr7_3:10624257-10624276 Msa1092820:CDS 30.0%
!! CTATTTTAGAGACAATAAGG+AGG + chr7_3:10624343-10624362 None:intergenic 30.0%
!!! TGGCTGTTTTATTTGTTATC+TGG - chr7_3:10624593-10624612 Msa1092820:intron 30.0%
!! TCATGTATCAAGTATTGAAC+CGG + chr7_3:10624626-10624645 None:intergenic 30.0%
ATGATCCTATTTAGATTCTG+TGG - chr7_3:10624642-10624661 Msa1092820:intron 30.0%
ATTTCCGATTGAAACATCAT+TGG - chr7_3:10624681-10624700 Msa1092820:intron 30.0%
CTTAATCCCTTAGATAACTA+CGG - chr7_3:10624780-10624799 Msa1092820:intron 30.0%
TTTCATGCGTAGTTTATTTC+AGG - chr7_3:10625024-10625043 Msa1092820:intron 30.0%
! TGATTTTTGTTCATCCCAAT+TGG - chr7_3:10625176-10625195 Msa1092820:intron 30.0%
CTAACTACTAATTAACCAAG+AGG + chr7_3:10625271-10625290 None:intergenic 30.0%
CTCTTGGTTAATTAGTAGTT+AGG - chr7_3:10625269-10625288 Msa1092820:intron 30.0%
TTGGTTAATTAGTAGTTAGG+TGG - chr7_3:10625272-10625291 Msa1092820:intron 30.0%
TGGTTAATTAGTAGTTAGGT+GGG - chr7_3:10625273-10625292 Msa1092820:intron 30.0%
CAAGTTATTGAGAAGAGTTT+GGG - chr7_3:10625350-10625369 Msa1092820:intron 30.0%
AAGTTATTGAGAAGAGTTTG+GGG - chr7_3:10625351-10625370 Msa1092820:intron 30.0%
!!! GCAATTGTTATTTCCTTTTC+AGG - chr7_3:10625588-10625607 Msa1092820:intron 30.0%
AAACACTATTAACAACAACC+GGG - chr7_3:10625661-10625680 Msa1092820:intron 30.0%
! ATAAACTGATTCTTGAAAGC+AGG + chr7_3:10625763-10625782 None:intergenic 30.0%
!! CTTTGAAGCTTGAAGAATTT+GGG - chr7_3:10626100-10626119 Msa1092820:intron 30.0%
! TTTGAAGCTTGAAGAATTTG+GGG - chr7_3:10626101-10626120 Msa1092820:intron 30.0%
AAACAACCTCAAAGATTGAT+GGG - chr7_3:10626419-10626438 Msa1092820:intron 30.0%
AAAATACCCATCAATCTTTG+AGG + chr7_3:10626428-10626447 None:intergenic 30.0%
AAGAGGAGTAAATTTCGTTA+AGG - chr7_3:10626525-10626544 Msa1092820:intron 30.0%
AGAGGAGTAAATTTCGTTAA+GGG - chr7_3:10626526-10626545 Msa1092820:intron 30.0%
!! TCATTTGATTTTGACGACAA+CGG - chr7_3:10626562-10626581 Msa1092820:intron 30.0%
TTGTTGGAAATTTATCCTCT+AGG - chr7_3:10626604-10626623 Msa1092820:intron 30.0%
TAGGAATATTTGGTCGTATA+AGG - chr7_3:10626623-10626642 Msa1092820:intron 30.0%
!! GTTACCAATGCTTGTTATTA+CGG + chr7_3:10626670-10626689 None:intergenic 30.0%
! ATAGCTTGATAACTAGACAA+AGG - chr7_3:10626697-10626716 Msa1092820:intron 30.0%
!! GAAAACTCTAAGACTTAGTT+TGG - chr7_3:10626719-10626738 Msa1092820:intron 30.0%
!!! GCATATTTTAAGTTCTACCA+GGG + chr7_3:10626870-10626889 None:intergenic 30.0%
!!! TGCATATTTTAAGTTCTACC+AGG + chr7_3:10626871-10626890 None:intergenic 30.0%
CTTAAAATATGCATTGAAGG+AGG - chr7_3:10626878-10626897 Msa1092820:intron 30.0%
!! TAAGAGTATTAAAGCGATAC+GGG + chr7_3:10626939-10626958 None:intergenic 30.0%
! TTAGACTTTGTTTAGGAGTT+AGG + chr7_3:10627071-10627090 None:intergenic 30.0%
! GTTTCTCTTAGACTTTGTTT+AGG + chr7_3:10627078-10627097 None:intergenic 30.0%
TGAATAGACTTTCACCTTAA+TGG - chr7_3:10627101-10627120 Msa1092820:intron 30.0%
TAGTATTACATGATAGGTGT+TGG - chr7_3:10627159-10627178 Msa1092820:intron 30.0%
! AAAAGGCTTTTATTCTAGGT+GGG + chr7_3:10627189-10627208 None:intergenic 30.0%
! TTATGATCAGAACTTTTCAG+TGG - chr7_3:10627210-10627229 Msa1092820:intron 30.0%
ATTTCTAAACCAGTGGATAA+TGG - chr7_3:10627310-10627329 Msa1092820:intron 30.0%
ACAGCTGTTAATCTTAAAAC+CGG - chr7_3:10627459-10627478 Msa1092820:intron 30.0%
AAAGGTGGAATCAAAGTAAA+TGG - chr7_3:10627567-10627586 Msa1092820:intron 30.0%
!! AAGACTCTGGAATAGAAAAA+AGG + chr7_3:10627768-10627787 None:intergenic 30.0%
!!! CAGTTTTTTGGTGATAATGT+TGG - chr7_3:10627801-10627820 Msa1092820:intron 30.0%
!!! GTTTTTTGGTGATAATGTTG+GGG - chr7_3:10627803-10627822 Msa1092820:intron 30.0%
TGGTCTTTCCAAAAGTAAAA+CGG + chr7_3:10628084-10628103 None:intergenic 30.0%
AGAATTGTAATCCAGTGAAT+TGG + chr7_3:10628283-10628302 None:intergenic 30.0%
GGAATAACGAACGAAGAAAA+TGG - chr7_3:10622184-10622203 Msa1092820:three_prime_UTR 35.0%
!! GCTCTTGAATTTGTTAAACG+TGG - chr7_3:10622260-10622279 Msa1092820:three_prime_UTR 35.0%
CTGGTATAAGCTGTGAATAA+CGG - chr7_3:10622428-10622447 Msa1092820:CDS 35.0%
!! GTGTTACGGTGTTATTATCA+GGG + chr7_3:10622624-10622643 None:intergenic 35.0%
!! TGTGTTACGGTGTTATTATC+AGG + chr7_3:10622625-10622644 None:intergenic 35.0%
GATAATAACACCGTAACACA+TGG - chr7_3:10622625-10622644 Msa1092820:CDS 35.0%
!! ACTTGGTGCATGTATAGAAA+TGG - chr7_3:10622864-10622883 Msa1092820:CDS 35.0%
!! CCTTACAAGCAAGTTTTGTA+AGG + chr7_3:10622918-10622937 None:intergenic 35.0%
! CCTTACAAAACTTGCTTGTA+AGG - chr7_3:10622915-10622934 Msa1092820:CDS 35.0%
GTGTGAGACATGTGATTATT+GGG + chr7_3:10623009-10623028 None:intergenic 35.0%
AATAATCACATGTCTCACAC+CGG - chr7_3:10623009-10623028 Msa1092820:CDS 35.0%
! TATCTCATGGGTTGTAAGAT+TGG - chr7_3:10623109-10623128 Msa1092820:intron 35.0%
AAAACATAAAGGAGCTACCT+GGG + chr7_3:10623146-10623165 None:intergenic 35.0%
TAAAACATAAAGGAGCTACC+TGG + chr7_3:10623147-10623166 None:intergenic 35.0%
! GTTGTGTTTAGAGTTAGGTT+TGG + chr7_3:10623197-10623216 None:intergenic 35.0%
ACCTAACTCTAAACACAACA+CGG - chr7_3:10623198-10623217 Msa1092820:intron 35.0%
! TTACTTTATGGCTCTGTGAT+TGG - chr7_3:10623359-10623378 Msa1092820:intron 35.0%
TTCCTGATTACAACACTGAT+CGG - chr7_3:10623680-10623699 Msa1092820:intron 35.0%
CTTAATGCAGGTCTTTCATA+AGG + chr7_3:10623821-10623840 None:intergenic 35.0%
AAAGGATATTTGCTTCCAGA+AGG - chr7_3:10623842-10623861 Msa1092820:intron 35.0%
CAAAATAACCAGTTGTGGAA+TGG + chr7_3:10623874-10623893 None:intergenic 35.0%
!!! AACTGGTTATTTTGAGTGGT+TGG - chr7_3:10623880-10623899 Msa1092820:intron 35.0%
AGCTATATTACTTAGTTGGG+GGG - chr7_3:10624067-10624086 Msa1092820:intron 35.0%
! GGGGTAATTTTGTATGTTGT+TGG - chr7_3:10624086-10624105 Msa1092820:intron 35.0%
!!! ATTTGGTTGTTTTGGCTCTT+TGG - chr7_3:10624147-10624166 Msa1092820:intron 35.0%
!!! TTTGGTTGTTTTGGCTCTTT+GGG - chr7_3:10624148-10624167 Msa1092820:intron 35.0%
AGGATTGTAGTTGAATTAGG+AGG - chr7_3:10624260-10624279 Msa1092820:CDS 35.0%
AGACAATAAGGAGGAATGAA+CGG + chr7_3:10624334-10624353 None:intergenic 35.0%
CCATGTTCTCTATACCATTT+GGG + chr7_3:10624472-10624491 None:intergenic 35.0%
ACCATGTTCTCTATACCATT+TGG + chr7_3:10624473-10624492 None:intergenic 35.0%
! TTTGTTATCTGGCTTAGATC+CGG - chr7_3:10624604-10624623 Msa1092820:intron 35.0%
TCTAACACTGAATTACTCCT+CGG + chr7_3:10624913-10624932 None:intergenic 35.0%
GTAAATATAGGCAATCCTCT+TGG - chr7_3:10625253-10625272 Msa1092820:intron 35.0%
GGTTAATTAGTAGTTAGGTG+GGG - chr7_3:10625274-10625293 Msa1092820:intron 35.0%
GTTAATTAGTAGTTAGGTGG+GGG - chr7_3:10625275-10625294 Msa1092820:intron 35.0%
AGAGAAATGTAGACAAGAAG+AGG - chr7_3:10625309-10625328 Msa1092820:intron 35.0%
GCAAGTTATTGAGAAGAGTT+TGG - chr7_3:10625349-10625368 Msa1092820:intron 35.0%
TCAAACTCGGAGAATTTCAA+GGG + chr7_3:10625400-10625419 None:intergenic 35.0%
GATGAAAATTGCTACAAACC+CGG + chr7_3:10625466-10625485 None:intergenic 35.0%
AACTAACTCAACTCCTGAAA+AGG + chr7_3:10625604-10625623 None:intergenic 35.0%
AACACTATTAACAACAACCG+GGG - chr7_3:10625662-10625681 Msa1092820:intron 35.0%
TTTGTAACTTATGGTTTCCC+CGG + chr7_3:10625682-10625701 None:intergenic 35.0%
GATATCATGGAAACTACCAA+AGG + chr7_3:10625844-10625863 None:intergenic 35.0%
GAACGTTACAAGAGATATCA+TGG + chr7_3:10625857-10625876 None:intergenic 35.0%
GTGTCAATATGATGTTCCTA+CGG + chr7_3:10625946-10625965 None:intergenic 35.0%
!! GCTTTGAAGCTTGAAGAATT+TGG - chr7_3:10626099-10626118 Msa1092820:intron 35.0%
TTATCCATAAGAGCAACAAG+CGG + chr7_3:10626398-10626417 None:intergenic 35.0%
CAAACAACCTCAAAGATTGA+TGG - chr7_3:10626418-10626437 Msa1092820:intron 35.0%
! ATAGTAGCTTGCAATCTTTG+GGG + chr7_3:10626488-10626507 None:intergenic 35.0%
! CATAGTAGCTTGCAATCTTT+GGG + chr7_3:10626489-10626508 None:intergenic 35.0%
! TCATAGTAGCTTGCAATCTT+TGG + chr7_3:10626490-10626509 None:intergenic 35.0%
ATACGACCAAATATTCCTAG+AGG + chr7_3:10626622-10626641 None:intergenic 35.0%
TATAAGGAGAAGACCAATAG+AGG - chr7_3:10626639-10626658 Msa1092820:intron 35.0%
!! CAATGCTTGTTATTACGGTA+CGG + chr7_3:10626665-10626684 None:intergenic 35.0%
! TAAGACTTAGTTTGGGAGTT+TGG - chr7_3:10626727-10626746 Msa1092820:intron 35.0%
AAAAAACCTCCATACAAGGT+GGG + chr7_3:10626825-10626844 None:intergenic 35.0%
AAAAAAACCTCCATACAAGG+TGG + chr7_3:10626826-10626845 None:intergenic 35.0%
GGAAAAAAAACCTCCATACA+AGG + chr7_3:10626829-10626848 None:intergenic 35.0%
!!! GGTTTTTTTTCCCTCTTCAT+TGG - chr7_3:10626837-10626856 Msa1092820:intron 35.0%
! AAAGGCTTTTATTCTAGGTG+GGG + chr7_3:10627188-10627207 None:intergenic 35.0%
! CAAAAGGCTTTTATTCTAGG+TGG + chr7_3:10627190-10627209 None:intergenic 35.0%
! TCAGAACTTTTCAGTGGTAT+CGG - chr7_3:10627216-10627235 Msa1092820:intron 35.0%
! CCAGGAAATTTTACTTCCAA+GGG + chr7_3:10627348-10627367 None:intergenic 35.0%
! ACCAGGAAATTTTACTTCCA+AGG + chr7_3:10627349-10627368 None:intergenic 35.0%
GTTCATGATAACCAACCTTA+TGG - chr7_3:10627367-10627386 Msa1092820:intron 35.0%
!!! AGTTGACTGATTTGTTTTGC+AGG - chr7_3:10627434-10627453 Msa1092820:intron 35.0%
AACAAAGATATCTGTGGACA+TGG - chr7_3:10627482-10627501 Msa1092820:intron 35.0%
ATTGGAATACGACCAAATAC+AGG - chr7_3:10627516-10627535 Msa1092820:intron 35.0%
GTTTGAAGGTCAACTTACTT+TGG - chr7_3:10627542-10627561 Msa1092820:intron 35.0%
ATTTCACCAAATGCTTTGAC+TGG + chr7_3:10627648-10627667 None:intergenic 35.0%
!!! TGTTTTTTCCGGTTCCATTA+TGG + chr7_3:10627727-10627746 None:intergenic 35.0%
! ATAATGGAACCGGAAAAAAC+AGG - chr7_3:10627726-10627745 Msa1092820:intron 35.0%
!!! TCAAATTCGCCTGTTTTTTC+CGG + chr7_3:10627738-10627757 None:intergenic 35.0%
! TAGCACATTTGGAGCATATT+GGG - chr7_3:10627860-10627879 Msa1092820:intron 35.0%
TGGAAAGACCATTATATGCT+TGG - chr7_3:10628093-10628112 Msa1092820:intron 35.0%
GCCGCATTTGCATATTATTA+TGG - chr7_3:10628152-10628171 Msa1092820:intron 35.0%
TTGTATCCTATCCAATTCAC+TGG - chr7_3:10628269-10628288 Msa1092820:CDS 35.0%
TGTAATCCAGTGAATTGGAT+AGG + chr7_3:10628278-10628297 None:intergenic 35.0%
!! GTTTTGCTATGAACTCTTGT+GGG + chr7_3:10628385-10628404 None:intergenic 35.0%
!! TGTTTTGCTATGAACTCTTG+TGG + chr7_3:10628386-10628405 None:intergenic 35.0%
TTCGTTTACGTGATTCTTGG+TGG - chr7_3:10622215-10622234 Msa1092820:three_prime_UTR 40.0%
GTTAAACGTGGTGTTTCCAA+TGG - chr7_3:10622272-10622291 Msa1092820:three_prime_UTR 40.0%
!! TGAATAACGGACACAGACAT+CGG - chr7_3:10622441-10622460 Msa1092820:CDS 40.0%
! ACATTGTCACTTCTCATCGA+AGG + chr7_3:10622547-10622566 None:intergenic 40.0%
! CTAGAGAGAATAAGGCATCA+AGG - chr7_3:10622575-10622594 Msa1092820:CDS 40.0%
GCATAGACACTCATCACATT+AGG + chr7_3:10622765-10622784 None:intergenic 40.0%
GATGAGTGTCTATGCTTCTT+AGG - chr7_3:10622770-10622789 Msa1092820:CDS 40.0%
TTGGACGTGAGTAAGTGTAT+GGG + chr7_3:10622835-10622854 None:intergenic 40.0%
TATACATGCACCAAGTCCAA+TGG + chr7_3:10622860-10622879 None:intergenic 40.0%
TGGTGCATGTATAGAAATGG+TGG - chr7_3:10622867-10622886 Msa1092820:CDS 40.0%
GGTGTGAGACATGTGATTAT+TGG + chr7_3:10623010-10623029 None:intergenic 40.0%
GATTGGCAAATGTTTATCCC+AGG - chr7_3:10623126-10623145 Msa1092820:intron 40.0%
! TCCGTGTTGTGTTTAGAGTT+AGG + chr7_3:10623202-10623221 None:intergenic 40.0%
! TTATGGCTCTGTGATTGGAT+TGG - chr7_3:10623364-10623383 Msa1092820:intron 40.0%
AACAGTTTGCCCTAGTAGTT+TGG + chr7_3:10623588-10623607 None:intergenic 40.0%
TCCTGATTACAACACTGATC+GGG - chr7_3:10623681-10623700 Msa1092820:intron 40.0%
GCATAAACACTTCAGATCAG+AGG + chr7_3:10623733-10623752 None:intergenic 40.0%
GAAAGACCTGCATTAAGCAA+AGG - chr7_3:10623824-10623843 Msa1092820:intron 40.0%
CCACTCAAAATAACCAGTTG+TGG + chr7_3:10623879-10623898 None:intergenic 40.0%
!!! CCACAACTGGTTATTTTGAG+TGG - chr7_3:10623876-10623895 Msa1092820:intron 40.0%
AATGTGGGGCTCTTGATATT+TGG - chr7_3:10624130-10624149 Msa1092820:intron 40.0%
ATAAGGAGGAATGAACGGAA+AGG + chr7_3:10624329-10624348 None:intergenic 40.0%
CCAACACATGTATGAAAGGA+TGG + chr7_3:10624427-10624446 None:intergenic 40.0%
CCATCCTTTCATACATGTGT+TGG - chr7_3:10624424-10624443 Msa1092820:intron 40.0%
CCCAAATGGTATAGAGAACA+TGG - chr7_3:10624469-10624488 Msa1092820:intron 40.0%
GTGGACCACAGAATCTAAAT+AGG + chr7_3:10624650-10624669 None:intergenic 40.0%
AATCCCTTAGATAACTACGG+TGG - chr7_3:10624783-10624802 Msa1092820:CDS 40.0%
CAACCACCGTAGTTATCTAA+GGG + chr7_3:10624789-10624808 None:intergenic 40.0%
! ATAAAGGCATACGATGTAGC+CGG - chr7_3:10624823-10624842 Msa1092820:CDS 40.0%
CAGCTTCTGCCATTAAATGT+CGG + chr7_3:10624949-10624968 None:intergenic 40.0%
CATGCGTAGTTTATTTCAGG+TGG - chr7_3:10625027-10625046 Msa1092820:intron 40.0%
CTCAAACTCGGAGAATTTCA+AGG + chr7_3:10625401-10625420 None:intergenic 40.0%
CCAAGTATACAGCTCAAACT+CGG + chr7_3:10625413-10625432 None:intergenic 40.0%
CGAGTTTGAGCTGTATACTT+GGG - chr7_3:10625411-10625430 Msa1092820:intron 40.0%
! TCAGGAGTTGAGTTAGTTCT+TGG - chr7_3:10625606-10625625 Msa1092820:intron 40.0%
! GTTGAGTTAGTTCTTGGAAC+TGG - chr7_3:10625612-10625631 Msa1092820:intron 40.0%
AAAGTTCTCATTGTTGCCAC+TGG - chr7_3:10625699-10625718 Msa1092820:intron 40.0%
ACATGAAACTATTAGGCCGT+AGG - chr7_3:10625927-10625946 Msa1092820:intron 40.0%
TTGTGTGCAATGTCAAGTGT+AGG - chr7_3:10626077-10626096 Msa1092820:CDS 40.0%
! CTTGAAGAATTTGGGGTGAA+TGG - chr7_3:10626108-10626127 Msa1092820:intron 40.0%
GGGATATAGCAGATGCAAAT+AGG - chr7_3:10626160-10626179 Msa1092820:intron 40.0%
! AGTGCTATTCAATCTTCTCC+TGG - chr7_3:10626189-10626208 Msa1092820:intron 40.0%
CTATTCAATCTTCTCCTGGA+GGG - chr7_3:10626193-10626212 Msa1092820:intron 40.0%
GCTTACTGCAATGTTCTTCT+GGG + chr7_3:10626305-10626324 None:intergenic 40.0%
TGCTTACTGCAATGTTCTTC+TGG + chr7_3:10626306-10626325 None:intergenic 40.0%
!! TGATTTTGACGACAACGGAA+AGG - chr7_3:10626567-10626586 Msa1092820:intron 40.0%
CGTACCGTAATAACAAGCAT+TGG - chr7_3:10626663-10626682 Msa1092820:CDS 40.0%
! ACTTAGTTTGGGAGTTTGGA+GGG - chr7_3:10626731-10626750 Msa1092820:intron 40.0%
!!! GAAGAGGGTTTTGAGGATAA+AGG - chr7_3:10626761-10626780 Msa1092820:intron 40.0%
!!! AGGGTTTTGAGGATAAAGGA+AGG - chr7_3:10626765-10626784 Msa1092820:intron 40.0%
!!! GTTTTGAGGATAAAGGAAGG+AGG - chr7_3:10626768-10626787 Msa1092820:intron 40.0%
AGGATAAAGGAAGGAGGAAA+GGG - chr7_3:10626774-10626793 Msa1092820:intron 40.0%
GGAGAGAATAGGAAGGAAAT+TGG + chr7_3:10627037-10627056 None:intergenic 40.0%
AAAGTAGGGAGAGAATAGGA+AGG + chr7_3:10627044-10627063 None:intergenic 40.0%
! ACTTTGTTTAGGAGTTAGGC+TGG + chr7_3:10627067-10627086 None:intergenic 40.0%
TGTAAGAAGCCATTATCCAC+TGG + chr7_3:10627322-10627341 None:intergenic 40.0%
ATGGCTTCTTACATATCCCT+TGG - chr7_3:10627329-10627348 Msa1092820:intron 40.0%
CCCTTGGAAGTAAAATTTCC+TGG - chr7_3:10627345-10627364 Msa1092820:intron 40.0%
! AAGGTTGGTTATCATGAACC+AGG + chr7_3:10627366-10627385 None:intergenic 40.0%
TGATGCTGAGGATATCCATA+AGG + chr7_3:10627385-10627404 None:intergenic 40.0%
TGATCAAAGGAATGATGCTG+AGG + chr7_3:10627397-10627416 None:intergenic 40.0%
AACCGGAACAAAGATATCTG+TGG - chr7_3:10627476-10627495 Msa1092820:intron 40.0%
GTCCACAGATATCTTTGTTC+CGG + chr7_3:10627481-10627500 None:intergenic 40.0%
CCTTCAAACAGACCTGTATT+TGG + chr7_3:10627531-10627550 None:intergenic 40.0%
CCAAATACAGGTCTGTTTGA+AGG - chr7_3:10627528-10627547 Msa1092820:intron 40.0%
! GGTCAACTTACTTTGGAGAA+AGG - chr7_3:10627549-10627568 Msa1092820:intron 40.0%
! CAACTTACTTTGGAGAAAGG+TGG - chr7_3:10627552-10627571 Msa1092820:intron 40.0%
AACAGCTCAGTCTATGCTAT+TGG - chr7_3:10627606-10627625 Msa1092820:intron 40.0%
! GCATTTCCAGTCAAAGCATT+TGG - chr7_3:10627639-10627658 Msa1092820:intron 40.0%
!! ACATGCTGTTTCTGCCATAA+TGG - chr7_3:10627710-10627729 Msa1092820:intron 40.0%
! TGTTTCTGCCATAATGGAAC+CGG - chr7_3:10627716-10627735 Msa1092820:intron 40.0%
!!! ACTCTGTCTTGGCAGTTTTT+TGG - chr7_3:10627789-10627808 Msa1092820:intron 40.0%
GTTGGGGAAGTTGTCTATTA+TGG - chr7_3:10627819-10627838 Msa1092820:intron 40.0%
! GTAGCACATTTGGAGCATAT+TGG - chr7_3:10627859-10627878 Msa1092820:intron 40.0%
TGGAGCATATTGGGTAAACA+AGG - chr7_3:10627869-10627888 Msa1092820:intron 40.0%
GGAGCATATTGGGTAAACAA+GGG - chr7_3:10627870-10627889 Msa1092820:intron 40.0%
GTAAACAAGGGTCATGTTGT+TGG - chr7_3:10627882-10627901 Msa1092820:intron 40.0%
! CTTCTTTAGTTCCACCTTCA+AGG + chr7_3:10627914-10627933 None:intergenic 40.0%
AATTGAAGACTTGGCTGAGT+TGG - chr7_3:10627974-10627993 Msa1092820:intron 40.0%
TACAGTTAGTGAGAAACCAG+TGG - chr7_3:10628022-10628041 Msa1092820:intron 40.0%
! CAGCACTTCCGTTTTACTTT+TGG - chr7_3:10628073-10628092 Msa1092820:intron 40.0%
GTAGCATGCCAAGCATATAA+TGG + chr7_3:10628104-10628123 None:intergenic 40.0%
! AGATGGTGAAACTTCTGAGA+AGG - chr7_3:10628188-10628207 Msa1092820:intron 40.0%
!! AGGTTACCGATTTGTGGTTA+AGG - chr7_3:10628208-10628227 Msa1092820:CDS 40.0%
!! GGTTACCGATTTGTGGTTAA+GGG - chr7_3:10628209-10628228 Msa1092820:CDS 40.0%
TGAAGCCCTTAACCACAAAT+CGG + chr7_3:10628217-10628236 None:intergenic 40.0%
TGGGAATAGCTTCTGAATGA+TGG + chr7_3:10628366-10628385 None:intergenic 40.0%
CGAGTGGTTTCGTATAAGGA+AGG + chr7_3:10622069-10622088 None:intergenic 45.0%
!!! CTGAATTTTTTGGGAGCGAG+TGG + chr7_3:10622085-10622104 None:intergenic 45.0%
GCGTTCGTTTACGTGATTCT+TGG - chr7_3:10622212-10622231 Msa1092820:three_prime_UTR 45.0%
GTTTACGTGATTCTTGGTGG+TGG - chr7_3:10622218-10622237 Msa1092820:three_prime_UTR 45.0%
TGATGCTCTTAAGTCAGAGC+TGG - chr7_3:10622409-10622428 Msa1092820:CDS 45.0%
! CTTCTCATCGAAGGCATATC+CGG + chr7_3:10622538-10622557 None:intergenic 45.0%
TCAAGGACAAACCTAGACTC+TGG - chr7_3:10622592-10622611 Msa1092820:CDS 45.0%
!!! CAGGGTTTTTTCCAGAGTCT+AGG + chr7_3:10622606-10622625 None:intergenic 45.0%
TGTCCAGTGTCCATGTGTTA+CGG + chr7_3:10622638-10622657 None:intergenic 45.0%
TGGACGTGAGTAAGTGTATG+GGG + chr7_3:10622834-10622853 None:intergenic 45.0%
GTTGGACGTGAGTAAGTGTA+TGG + chr7_3:10622836-10622855 None:intergenic 45.0%
TTACTCACGTCCAACACCAT+TGG - chr7_3:10622841-10622860 Msa1092820:CDS 45.0%
! GTGATGACGACTAGCTAGTT+AGG - chr7_3:10623471-10623490 Msa1092820:intron 45.0%
AGTTTGCCCTAGTAGTTTGG+TGG + chr7_3:10623585-10623604 None:intergenic 45.0%
ACCCGATCAGTGTTGTAATC+AGG + chr7_3:10623685-10623704 None:intergenic 45.0%
TGTAACCACATGTCAGACAC+TGG - chr7_3:10623704-10623723 Msa1092820:intron 45.0%
GTGGAATGGTTCATACCTTC+TGG + chr7_3:10623860-10623879 None:intergenic 45.0%
GGTATGAACCATTCCACAAC+TGG - chr7_3:10623863-10623882 Msa1092820:intron 45.0%
TGCGCCAACACATGTATGAA+AGG + chr7_3:10624431-10624450 None:intergenic 45.0%
! TACATGTGTTGGCGCAAATG+AGG - chr7_3:10624435-10624454 Msa1092820:intron 45.0%
AGGAAAGGCTAACTCCCAAA+TGG - chr7_3:10624455-10624474 Msa1092820:intron 45.0%
CCAAAGGGCGAAAATAGAGT+AGG + chr7_3:10624549-10624568 None:intergenic 45.0%
! CCTACTCTATTTTCGCCCTT+TGG - chr7_3:10624546-10624565 Msa1092820:intron 45.0%
CCAACCACCGTAGTTATCTA+AGG + chr7_3:10624790-10624809 None:intergenic 45.0%
CCTTAGATAACTACGGTGGT+TGG - chr7_3:10624787-10624806 Msa1092820:CDS 45.0%
ATCTCTAGTTGCATCCAGTG+AGG - chr7_3:10624879-10624898 Msa1092820:CDS 45.0%
ATTAGTAGTTAGGTGGGGGT+TGG - chr7_3:10625279-10625298 Msa1092820:intron 45.0%
TTAGTAGTTAGGTGGGGGTT+GGG - chr7_3:10625280-10625299 Msa1092820:intron 45.0%
!! AGACAAGAAGAGGTGTTGAG+AGG - chr7_3:10625319-10625338 Msa1092820:intron 45.0%
!! GACAAGAAGAGGTGTTGAGA+GGG - chr7_3:10625320-10625339 Msa1092820:intron 45.0%
CCGAGTTTGAGCTGTATACT+TGG - chr7_3:10625410-10625429 Msa1092820:intron 45.0%
! TTTTAATACCCGAGCACCAG+TGG + chr7_3:10625718-10625737 None:intergenic 45.0%
GCTATTCAATCTTCTCCTGG+AGG - chr7_3:10626192-10626211 Msa1092820:intron 45.0%
AATGCCATTGTCATTGGTGG+TGG - chr7_3:10626216-10626235 Msa1092820:intron 45.0%
GTATCCACCACCAATGACAA+TGG + chr7_3:10626223-10626242 None:intergenic 45.0%
!! GTCATTGGTGGTGGATACAT+TGG - chr7_3:10626225-10626244 Msa1092820:intron 45.0%
ATACATTGGCATGGAGTGTG+CGG - chr7_3:10626239-10626258 Msa1092820:intron 45.0%
! CAAACCGCTTGTTGCTCTTA+TGG - chr7_3:10626391-10626410 Msa1092820:intron 45.0%
TATTACGGTACGGCCTCTAT+TGG + chr7_3:10626655-10626674 None:intergenic 45.0%
! GACTTAGTTTGGGAGTTTGG+AGG - chr7_3:10626730-10626749 Msa1092820:intron 45.0%
! CTTAGTTTGGGAGTTTGGAG+GGG - chr7_3:10626732-10626751 Msa1092820:intron 45.0%
GAGGATAAAGGAAGGAGGAA+AGG - chr7_3:10626773-10626792 Msa1092820:intron 45.0%
TAAAGGAAGGAGGAAAGGGA+AGG - chr7_3:10626778-10626797 Msa1092820:intron 45.0%
AAAGGAAGGAGGAAAGGGAA+GGG - chr7_3:10626779-10626798 Msa1092820:intron 45.0%
GAGTAATCTCCCACCTTGTA+TGG - chr7_3:10626813-10626832 Msa1092820:intron 45.0%
TAATCTCCCACCTTGTATGG+AGG - chr7_3:10626816-10626835 Msa1092820:intron 45.0%
! GGGTTTTCGTCCAATGAAGA+GGG + chr7_3:10626850-10626869 None:intergenic 45.0%
! AGGGTTTTCGTCCAATGAAG+AGG + chr7_3:10626851-10626870 None:intergenic 45.0%
TCTTCATTGGACGAAAACCC+TGG - chr7_3:10626850-10626869 Msa1092820:intron 45.0%
CTGGAAAGTAGGGAGAGAAT+AGG + chr7_3:10627048-10627067 None:intergenic 45.0%
AGGAGTTAGGCTGGAAAGTA+GGG + chr7_3:10627058-10627077 None:intergenic 45.0%
TAGGAGTTAGGCTGGAAAGT+AGG + chr7_3:10627059-10627078 None:intergenic 45.0%
!! GAACTTTTCAGTGGTATCGG+TGG - chr7_3:10627219-10627238 Msa1092820:intron 45.0%
GCTGAGGATATCCATAAGGT+TGG + chr7_3:10627381-10627400 None:intergenic 45.0%
ATCTGTGGACATGGTTGTAG+TGG - chr7_3:10627491-10627510 Msa1092820:intron 45.0%
TCTGTGGACATGGTTGTAGT+GGG - chr7_3:10627492-10627511 Msa1092820:intron 45.0%
! GACATGGTTGTAGTGGGAAT+TGG - chr7_3:10627498-10627517 Msa1092820:intron 45.0%
! AAGCATTTGGTGAAATGCGC+AGG - chr7_3:10627652-10627671 Msa1092820:intron 45.0%
GTTGTTGGAGCTTTCCTTGA+AGG - chr7_3:10627897-10627916 Msa1092820:intron 45.0%
AGAGTATGAAGCCATAGCCA+AGG - chr7_3:10627932-10627951 Msa1092820:intron 45.0%
TAACCTAGTGACCTTGGCTA+TGG + chr7_3:10627946-10627965 None:intergenic 45.0%
TAGCCAAGGTCACTAGGTTA+AGG - chr7_3:10627946-10627965 Msa1092820:intron 45.0%
AAGGCCAGCAATTGAAGACT+TGG - chr7_3:10627965-10627984 Msa1092820:intron 45.0%
TCAGCCAAGTCTTCAATTGC+TGG + chr7_3:10627972-10627991 None:intergenic 45.0%
CTCAGAAGTTTCACCATCTG+CGG + chr7_3:10628187-10628206 None:intergenic 45.0%
!! CTGAGAAGGTTACCGATTTG+TGG - chr7_3:10628202-10628221 Msa1092820:CDS 45.0%
GGAGCGAGTGGTTTCGTATA+AGG + chr7_3:10622073-10622092 None:intergenic 50.0%
TCGGATACAACACTGACACG+TGG - chr7_3:10622460-10622479 Msa1092820:CDS 50.0%
CAACACTGACACGTGGATAC+CGG - chr7_3:10622467-10622486 Msa1092820:CDS 50.0%
GTGTATGGTGAGTGAGACAC+CGG - chr7_3:10622516-10622535 Msa1092820:CDS 50.0%
ACACCGTAACACATGGACAC+TGG - chr7_3:10622632-10622651 Msa1092820:CDS 50.0%
! CAATGGAATCGTGTCGGTGT+CGG - chr7_3:10622710-10622729 Msa1092820:CDS 50.0%
GGACGTGAGTAAGTGTATGG+GGG + chr7_3:10622833-10622852 None:intergenic 50.0%
ACGTCCAACACCATTGGACT+TGG - chr7_3:10622847-10622866 Msa1092820:CDS 50.0%
TGCACCAAGTCCAATGGTGT+TGG + chr7_3:10622854-10622873 None:intergenic 50.0%
GTCCAATGTCAGACATGTGC+CGG + chr7_3:10623031-10623050 None:intergenic 50.0%
GTGATTGAATGCAGGGTCTG+AGG - chr7_3:10623265-10623284 Msa1092820:intron 50.0%
GTGATGTGTGACAGAAGCTG+TGG - chr7_3:10623444-10623463 Msa1092820:intron 50.0%
!!! GGTTGTTTTGGCTCTTTGGG+TGG - chr7_3:10624151-10624170 Msa1092820:intron 50.0%
TGTAACCTACAGCTGCTGCT+CGG - chr7_3:10624398-10624417 Msa1092820:intron 50.0%
! GTGTTGGCGCAAATGAGGAA+AGG - chr7_3:10624440-10624459 Msa1092820:intron 50.0%
TCTAGTTGCATCCAGTGAGG+TGG - chr7_3:10624882-10624901 Msa1092820:CDS 50.0%
!! AAGAAGAGGTGTTGAGAGGG+AGG - chr7_3:10625323-10625342 Msa1092820:intron 50.0%
! GAGAAGAGTTTGGGGCTTTG+TGG - chr7_3:10625359-10625378 Msa1092820:intron 50.0%
TCATTGTTGCCACTGGTGCT+CGG - chr7_3:10625706-10625725 Msa1092820:intron 50.0%
ATGACAATGGCATTCCCTCC+AGG + chr7_3:10626210-10626229 None:intergenic 50.0%
GGAGGGAATGCCATTGTCAT+TGG - chr7_3:10626210-10626229 Msa1092820:intron 50.0%
GGGAATGCCATTGTCATTGG+TGG - chr7_3:10626213-10626232 Msa1092820:intron 50.0%
!! TGGTGGTGGATACATTGGCA+TGG - chr7_3:10626230-10626249 Msa1092820:intron 50.0%
TTTGGGAGTTTGGAGGGGAA+CGG - chr7_3:10626737-10626756 Msa1092820:intron 50.0%
! GAACGGAGAAGAGGGTTTTG+AGG - chr7_3:10626754-10626773 Msa1092820:intron 50.0%
CCAAGACAGAGTGAAGACTC+TGG + chr7_3:10627781-10627800 None:intergenic 50.0%
CCAGAGTCTTCACTCTGTCT+TGG - chr7_3:10627778-10627797 Msa1092820:intron 50.0%
TGCTCCAAATGTGCTACCTG+CGG + chr7_3:10627856-10627875 None:intergenic 50.0%
GTTGGAGCTTTCCTTGAAGG+TGG - chr7_3:10627900-10627919 Msa1092820:intron 50.0%
AAGCCATAGCCAAGGTCACT+AGG - chr7_3:10627940-10627959 Msa1092820:intron 50.0%
! TGGCCTTAACCTAGTGACCT+TGG + chr7_3:10627952-10627971 None:intergenic 50.0%
! AAGACTTGGCTGAGTTGGAG+AGG - chr7_3:10627979-10627998 Msa1092820:intron 50.0%
! TGAGTTGGAGAGGCAAGGTT+TGG - chr7_3:10627989-10628008 Msa1092820:intron 50.0%
CTGCTAACCTCAATTGGTGG+TGG + chr7_3:10628053-10628072 None:intergenic 50.0%
CTGCTGCTAACCTCAATTGG+TGG + chr7_3:10628056-10628075 None:intergenic 50.0%
! GTGCTGCTGCTAACCTCAAT+TGG + chr7_3:10628059-10628078 None:intergenic 50.0%
TATGCTTGGCATGCTACAGC+TGG - chr7_3:10628107-10628126 Msa1092820:intron 50.0%
ATGCTTGGCATGCTACAGCT+GGG - chr7_3:10628108-10628127 Msa1092820:intron 50.0%
!! ATGGAAAAAAGCGCCGCAGA+TGG - chr7_3:10628171-10628190 Msa1092820:intron 50.0%
!! CTTGGTGGTGGTGTATCAGC+TGG - chr7_3:10622230-10622249 Msa1092820:three_prime_UTR 55.0%
ACACCAGACGTATCCGATCC+TGG - chr7_3:10622733-10622752 Msa1092820:CDS 55.0%
CACCAGACGTATCCGATCCT+GGG - chr7_3:10622734-10622753 Msa1092820:CDS 55.0%
CATTAGGCGTGTCCCAGGAT+CGG + chr7_3:10622749-10622768 None:intergenic 55.0%
CATCACATTAGGCGTGTCCC+AGG + chr7_3:10622754-10622773 None:intergenic 55.0%
CACCGGCACATGTCTGACAT+TGG - chr7_3:10623026-10623045 Msa1092820:CDS 55.0%
GGTGTCCAGTGTCTGACATG+TGG + chr7_3:10623712-10623731 None:intergenic 55.0%
! GAGTTTGGGGCTTTGTGGCA+TGG - chr7_3:10625364-10625383 Msa1092820:intron 55.0%
CATTGTTGCCACTGGTGCTC+GGG - chr7_3:10625707-10625726 Msa1092820:intron 55.0%
CATGGAGTGTGCGGCATCTT+TGG - chr7_3:10626248-10626267 Msa1092820:intron 55.0%
TTTGGAGGGGAACGGAGAAG+AGG - chr7_3:10626745-10626764 Msa1092820:intron 55.0%
TTGGAGGGGAACGGAGAAGA+GGG - chr7_3:10626746-10626765 Msa1092820:intron 55.0%
TATGGAGATCTCTCAGCCGC+AGG - chr7_3:10627837-10627856 Msa1092820:intron 55.0%
TCAGCCGCAGGTAGCACATT+TGG - chr7_3:10627849-10627868 Msa1092820:intron 55.0%
! TTGGCTGAGTTGGAGAGGCA+AGG - chr7_3:10627984-10628003 Msa1092820:intron 55.0%
!! ATTGGTGGTGGTGATGCCAC+TGG + chr7_3:10628041-10628060 None:intergenic 55.0%
GGCATCACCACCACCAATTG+AGG - chr7_3:10628043-10628062 Msa1092820:intron 55.0%
TGCTTGGCATGCTACAGCTG+GGG - chr7_3:10628109-10628128 Msa1092820:intron 55.0%
GTCCCAGGATCGGATACGTC+TGG + chr7_3:10622739-10622758 None:intergenic 60.0%
! TGCAGGGTCTGAGGTGCATG+AGG - chr7_3:10623274-10623293 Msa1092820:intron 60.0%
! GCAGGGTCTGAGGTGCATGA+GGG - chr7_3:10623275-10623294 Msa1092820:intron 60.0%
! CAGGGTCTGAGGTGCATGAG+GGG - chr7_3:10623276-10623295 Msa1092820:intron 60.0%
TGAGGGGCAGGCAGGTGTTA+TGG - chr7_3:10623292-10623311 Msa1092820:intron 60.0%
CCTCGGCTAAACCACCTCAC+TGG + chr7_3:10624896-10624915 None:intergenic 60.0%
CCAGTGAGGTGGTTTAGCCG+AGG - chr7_3:10624893-10624912 Msa1092820:intron 60.0%
! GTCTGAGGTGCATGAGGGGC+AGG - chr7_3:10623280-10623299 Msa1092820:intron 65.0%
GGAAGCCGAGCAGCAGCTGT+AGG + chr7_3:10624406-10624425 None:intergenic 65.0%
GAGGTGCATGAGGGGCAGGC+AGG - chr7_3:10623284-10623303 Msa1092820:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 10622041 10628470 10622041 ID=Msa1092820;Name=Msa1092820
chr7_3 mRNA 10622041 10628470 10622041 ID=Msa1092820-mRNA-1;Parent=Msa1092820;Name=Msa1092820-mRNA-1;_AED=0.02;_eAED=0.02;_QI=162|1|1|1|1|1|7|274|483
chr7_3 exon 10622041 10623055 10622041 ID=Msa1092820-mRNA-1:exon:2807;Parent=Msa1092820-mRNA-1
chr7_3 exon 10623923 10624041 10623923 ID=Msa1092820-mRNA-1:exon:2806;Parent=Msa1092820-mRNA-1
chr7_3 exon 10624193 10624412 10624193 ID=Msa1092820-mRNA-1:exon:2805;Parent=Msa1092820-mRNA-1
chr7_3 exon 10624783 10624901 10624783 ID=Msa1092820-mRNA-1:exon:2804;Parent=Msa1092820-mRNA-1
chr7_3 exon 10626021 10626101 10626021 ID=Msa1092820-mRNA-1:exon:2803;Parent=Msa1092820-mRNA-1
chr7_3 exon 10626648 10626699 10626648 ID=Msa1092820-mRNA-1:exon:2802;Parent=Msa1092820-mRNA-1
chr7_3 exon 10628189 10628470 10628189 ID=Msa1092820-mRNA-1:exon:2801;Parent=Msa1092820-mRNA-1
chr7_3 five_prime_UTR 10628309 10628470 10628309 ID=Msa1092820-mRNA-1:five_prime_utr;Parent=Msa1092820-mRNA-1
chr7_3 CDS 10628189 10628308 10628189 ID=Msa1092820-mRNA-1:cds;Parent=Msa1092820-mRNA-1
chr7_3 CDS 10626648 10626699 10626648 ID=Msa1092820-mRNA-1:cds;Parent=Msa1092820-mRNA-1
chr7_3 CDS 10626021 10626101 10626021 ID=Msa1092820-mRNA-1:cds;Parent=Msa1092820-mRNA-1
chr7_3 CDS 10624783 10624901 10624783 ID=Msa1092820-mRNA-1:cds;Parent=Msa1092820-mRNA-1
chr7_3 CDS 10624193 10624412 10624193 ID=Msa1092820-mRNA-1:cds;Parent=Msa1092820-mRNA-1
chr7_3 CDS 10623923 10624041 10623923 ID=Msa1092820-mRNA-1:cds;Parent=Msa1092820-mRNA-1
chr7_3 CDS 10622315 10623055 10622315 ID=Msa1092820-mRNA-1:cds;Parent=Msa1092820-mRNA-1
chr7_3 three_prime_UTR 10622041 10622314 10622041 ID=Msa1092820-mRNA-1:three_prime_utr;Parent=Msa1092820-mRNA-1
Gene Sequence

>Msa1092820

ATGGGAAGAGCGTTCGTTTACGTGATTCTTGGTGGTGGTGTATCAGCTGGTTATGCTGCTCTTGAATTTGTTAAACGTGGTGTTTCCAATGGTGAACTTTGTATCATTTCTGATGAATCAGTAGCTCCTTATGAAAGACCTGCATTAAGCAAAGGATATTTGCTTCCAGAAGCTGCTGCTCGGCTTCCATCCTTTCATACATGTGTTGGCGCAAATGAGGAAAGGCTAACTCCCAAATGGTATAGAGAACATGGAGTTGAGTTAGTTCTTGGAACTGGAGTTAAGTCTGCTGATGTGAAACGTAAAACACTATTAACAACAACCGGGGAAACCATAAGTTACAAAGTTCTCATTGTTGCCACTGGTGCTCGGGCTTTGAAGCTTGAAGAATTTGGGGTGAATGGATCAGATGCAGAAAATGTATGTTACTTACGGGATATAGCAGATGCAAATAGGCTTGTGAGTGCTATTCAATCTTCTCCTGGAGGGAATGCCATTGTCATTGGTGGTGGATACATTGGCATGGAGTGTGCGGCATCTTTGGTGATCAATAAAATCAGTGTAACAATGGTCTTCCCAGAAGAACATTGCATGGCTCGATTGCTGACCCCAAAGATTGCAAGCTACTATGAAGAATATTATAAATCAAGAGGAGTAAATTTCGTTAAGGGAACTGTTTTATCATCATTTGATTTTGACGACAACGGAAAGGTTACAGCTGTTAATCTTAAAACCGGAACAAAGATATCTGTGGACATGGTTGTAGTGGGAATTGGAATACGACCAAATACAGGTCTGTTTGAAGGTCAACTTACTTTGGAGAAAGGTGGAATCAAAGTAAATGGAATGTTTCAATCAAGCAACAGCTCAGTCTATGCTATTGGAGATGTTGCAGCATTTCCAGTCAAAGCATTTGGTGAAATGCGCAGGCTTGAGCATGTTGATTCAGCAAGAAAATCTGCAAAACATGCTGTTTCTGCCATAATGGAACCGGAAAAAACAGGCGAATTTGATTACATTCCTTTTTTCTATTCCAGAGTCTTCACTCTGTCTTGGCAGTTTTTTGGTGATAATGTTGGGGAAGTTGTCTATTATGGAGATCTCTCAGCCGCAGGTAGCACATTTGGAGCATATTGGGTAAACAAGGGTCATGTTGTTGGAGCTTTCCTTGAAGGTGGAACTAAAGAAGAGTATGAAGCCATAGCCAAGGTCACTAGGTTAAGGCCAGCAATTGAAGACTTGGCTGAGTTGGAGAGGCAAGGTTTGGCGTTTGCAGTTACAGTTAGTGAGAAACCAGTGGCATCACCACCACCAATTGAGGTTAGCAGCAGCACTTCCGTTTTACTTTTGGAAAGACCATTATATGCTTGGCATGCTACAGCTGGGGTCGTTCTTGCTGCATCAATAGCCGCATTTGCATATTATTATGGAAAAAAGCGCCGCAGATGGTGA

Protein sequence

>Msa1092820

MGRAFVYVILGGGVSAGYAALEFVKRGVSNGELCIISDESVAPYERPALSKGYLLPEAAARLPSFHTCVGANEERLTPKWYREHGVELVLGTGVKSADVKRKTLLTTTGETISYKVLIVATGARALKLEEFGVNGSDAENVCYLRDIADANRLVSAIQSSPGGNAIVIGGGYIGMECAASLVINKISVTMVFPEEHCMARLLTPKIASYYEEYYKSRGVNFVKGTVLSSFDFDDNGKVTAVNLKTGTKISVDMVVVGIGIRPNTGLFEGQLTLEKGGIKVNGMFQSSNSSVYAIGDVAAFPVKAFGEMRRLEHVDSARKSAKHAVSAIMEPEKTGEFDYIPFFYSRVFTLSWQFFGDNVGEVVYYGDLSAAGSTFGAYWVNKGHVVGAFLEGGTKEEYEAIAKVTRLRPAIEDLAELERQGLAFAVTVSEKPVASPPPIEVSSSTSVLLLERPLYAWHATAGVVLAASIAAFAYYYGKKRRRW*