AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0194970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0194970 MtrunA17_Chr2g0286181 87.029 478 9 6 1 426 1 477 0.0 804
Msa0194970 MtrunA17_Chr1g0155741 35.526 304 155 7 147 410 117 419 7.43e-42 155
Msa0194970 MtrunA17_Chr1g0186011 35.294 272 119 7 207 426 221 487 7.16e-33 130
Msa0194970 MtrunA17_Chr8g0358201 35.000 140 60 5 271 381 53 190 1.93e-13 72.0
Msa0194970 MtrunA17_Chr3g0129261 37.113 97 60 1 262 358 59 154 2.24e-13 71.6
Msa0194970 MtrunA17_Chr2g0292511 31.690 142 76 4 270 391 27 167 5.47e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0194970 AT5G18570.1 51.391 539 139 11 9 426 1 537 8.43e-141 420
Msa0194970 AT5G18570.1 55.000 80 34 1 410 487 602 681 8.72e-19 90.1
Msa0194970 AT1G07615.1 46.108 167 76 5 269 426 305 466 7.01e-33 131
Msa0194970 AT4G39520.1 33.077 130 84 2 262 391 60 186 1.64e-13 72.4
Msa0194970 AT1G56050.1 35.385 130 53 5 271 371 57 184 8.58e-13 70.5
Msa0194970 AT1G17470.1 31.538 130 83 2 254 378 49 177 2.39e-12 68.9
Msa0194970 AT1G17470.2 31.538 130 83 2 254 378 49 177 2.39e-12 68.9
Msa0194970 AT1G72660.2 31.538 130 83 2 254 378 49 177 4.05e-12 68.2
Msa0194970 AT1G72660.3 31.538 130 83 2 254 378 49 177 4.05e-12 68.2
Msa0194970 AT1G72660.1 31.538 130 83 2 254 378 49 177 4.05e-12 68.2
Msa0194970 AT1G30580.1 32.394 142 75 4 270 391 27 167 2.11e-11 66.2

Find 187 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTACATACATTATTTAT+TGG 0.128384 2_1:-11564940 Msa0194970:three_prime_UTR
GGAAGTAATGCCACTCTAAT+TGG 0.191369 2_1:-11565497 Msa0194970:exon
CACAAGCCTCAAGGACATTT+TGG 0.211110 2_1:+11566010 None:intergenic
TGATGAAGAATTGGGGTTTA+TGG 0.218508 2_1:-11569579 Msa0194970:CDS
TTGTTATAAGCAACTATAAA+TGG 0.224726 2_1:+11567019 None:intergenic
TGGTAGGGAGGAGGTGATTT+TGG 0.235029 2_1:-11569177 Msa0194970:CDS
TTGAAGAAGGTGAAGAATTC+TGG 0.257218 2_1:-11569547 Msa0194970:CDS
TATAGTTGCTTATAACAAAA+TGG 0.257241 2_1:-11567014 Msa0194970:CDS
TACAACTTTGCTTCCCAATC+TGG 0.258739 2_1:-11567956 Msa0194970:CDS
TTCCAGAAGCATACGAAAAC+TGG 0.259566 2_1:-11566988 Msa0194970:CDS
GAAGGAGCACACCGAGGTTT+TGG 0.293578 2_1:-11567874 Msa0194970:CDS
ATGTACTGCAACTACGAAAT+AGG 0.304579 2_1:-11565458 Msa0194970:intron
AATTACACACTTGTTCTTGA+TGG 0.312687 2_1:-11565069 Msa0194970:three_prime_UTR
GAGTGGCATTACTTCCATTC+AGG 0.312704 2_1:+11565504 None:intergenic
ACATTATTTATTGGCTTGAA+TGG 0.318870 2_1:-11564931 Msa0194970:three_prime_UTR
TTTAGGATTTGGAGGAGGTT+TGG 0.321312 2_1:+11569853 None:intergenic
AGTGTACTCTTCCCTGCATT+TGG 0.333641 2_1:+11568027 None:intergenic
GGTCCATCCGGTGGGGATGG+AGG 0.337189 2_1:-11569377 Msa0194970:CDS
GTCTGAAGATGATGAAGAAT+TGG 0.341137 2_1:-11569588 Msa0194970:CDS
TGCCACCAGGGACGGTGATT+AGG 0.343834 2_1:-11569205 Msa0194970:CDS
TTGACAGCGCTCATACAAAA+AGG 0.344719 2_1:+11566926 None:intergenic
ATGGTAGTGGCAGACCTTCC+AGG 0.354141 2_1:-11567904 Msa0194970:CDS
TGTCCACAGAGTCAATTAAA+TGG 0.358613 2_1:-11565527 Msa0194970:CDS
CTTTGACTACGATTCAACTA+TGG 0.367402 2_1:-11567923 Msa0194970:CDS
GCCACCAGGGACGGTGATTA+GGG 0.368808 2_1:-11569204 Msa0194970:CDS
AGAGGAGGAAGGTGAGAAAG+TGG 0.379500 2_1:+11569736 None:intergenic
AATGGCTTCTCAGCAAGTTC+AGG 0.382943 2_1:+11567037 None:intergenic
TCCGGTGGGGATGGAGGGAG+AGG 0.384757 2_1:-11569371 Msa0194970:intron
ATTTGGAGGAGGTTTGGATT+TGG 0.384864 2_1:+11569859 None:intergenic
GTTGCAGATGTTGGTATAGT+TGG 0.385284 2_1:-11568054 Msa0194970:intron
GGAACGGAAGTATGGCATTC+AGG 0.387965 2_1:-11569424 Msa0194970:CDS
GACTTGTGGGTGTTGAGTTT+AGG 0.390754 2_1:+11569836 None:intergenic
TTTCGTAGTTGCAGTACATA+TGG 0.391667 2_1:+11565462 None:intergenic
CATCATCGTTATCGAGTTTG+TGG 0.399071 2_1:+11569672 None:intergenic
GCGGAGAGGAGTGGCGGTTC+CGG 0.400789 2_1:+11569809 None:intergenic
TGTATCAGATGGAGATGATA+TGG 0.401049 2_1:-11565590 Msa0194970:intron
GCGAAAATCTTCGCGAAAGC+CGG 0.416186 2_1:-11569455 Msa0194970:CDS
CGGTTCCGGTGAGGACTTGT+GGG 0.419070 2_1:+11569823 None:intergenic
CATGACTCCTCAAACAAATC+TGG 0.420155 2_1:-11565567 Msa0194970:CDS
TTTGTATGAGCGCTGTCAAA+AGG 0.420667 2_1:-11566922 Msa0194970:CDS
AGACGGAGGGAACGGAAGTA+TGG 0.420800 2_1:-11569432 Msa0194970:CDS
TTGTGGAGCAATTGGTGAAT+TGG 0.422988 2_1:+11569689 None:intergenic
TATCGAGTTTGTGGAGCAAT+TGG 0.426319 2_1:+11569681 None:intergenic
GACCTTCCAGGTCTTCTTGA+AGG 0.429947 2_1:-11567892 Msa0194970:CDS
CGAAAACTGGGAATCCTTCA+AGG 0.430197 2_1:-11566975 Msa0194970:CDS
TCTGAAGATGATGAAGAATT+GGG 0.434922 2_1:-11569587 Msa0194970:CDS
TTGGAACAAGATATAGAAAT+GGG 0.435555 2_1:+11569917 None:intergenic
AAGGGATAATTTGCCACCTC+TGG 0.436401 2_1:+11567979 None:intergenic
TTTCAGATACATGTCGTTGA+TGG 0.441011 2_1:-11567121 Msa0194970:intron
GAGAAATACGTACCGTTTGG+AGG 0.441360 2_1:-11569398 Msa0194970:CDS
GTCCATCCGGTGGGGATGGA+GGG 0.450001 2_1:-11569376 Msa0194970:CDS
GTGTTGAGTTTAGGATTTGG+AGG 0.451774 2_1:+11569845 None:intergenic
GTTGGAACAAGATATAGAAA+TGG 0.454024 2_1:+11569916 None:intergenic
TAGGGAGGCTGGTAGGGAGG+AGG 0.455313 2_1:-11569186 Msa0194970:CDS
AGAATTGGGGTTTATGGATG+AGG 0.456087 2_1:-11569573 Msa0194970:CDS
AGTGAAGGAGAAAGGATTGC+CGG 0.456941 2_1:-11569501 Msa0194970:CDS
AAAGGAAACAACGCCCAGAT+TGG 0.457445 2_1:+11567942 None:intergenic
CAGAAGGCGTTGTTGTTGCC+AGG 0.459645 2_1:-11569137 Msa0194970:CDS
TGGGTGTTGAGTTTAGGATT+TGG 0.459752 2_1:+11569842 None:intergenic
TCACCATTCTCAGCAATCTT+CGG 0.460210 2_1:+11569062 None:intergenic
CGGGAGAAATACGTACCGTT+TGG 0.460923 2_1:-11569401 Msa0194970:CDS
GAAGTAATGCCACTCTAATT+GGG 0.465787 2_1:-11565496 Msa0194970:exon
CACTGAAAGGTGTTCTGCAC+TGG 0.465901 2_1:-11567827 Msa0194970:intron
AGTCAATTAAATGGCCTGAA+TGG 0.466285 2_1:-11565518 Msa0194970:CDS
AAGGAAAAGTTGCAATCTCA+TGG 0.466487 2_1:-11566956 Msa0194970:CDS
AAGGAAACAACGCCCAGATT+GGG 0.467360 2_1:+11567943 None:intergenic
GAAGAAGAAGTGAAGGAGAA+AGG 0.468046 2_1:-11569509 Msa0194970:CDS
TGATGCACCAGATTTGTTTG+AGG 0.468296 2_1:+11565560 None:intergenic
ATAGTTGGTGCTCCAAATGC+AGG 0.468647 2_1:-11568039 Msa0194970:CDS
AGGTTTGGATTTGGTGCGGG+TGG 0.469088 2_1:+11569868 None:intergenic
TTGGGAAGCAAAGTTGTAAA+GGG 0.469159 2_1:+11567961 None:intergenic
AGTGTAGGTGGTGGCGTCGC+CGG 0.469582 2_1:+11569787 None:intergenic
ACAACTTTGCTTCCCAATCT+GGG 0.469782 2_1:-11567955 Msa0194970:CDS
CGGTGATTAGGGAGGCTGGT+AGG 0.470355 2_1:-11569193 Msa0194970:CDS
ATGGATGAGGAGATTGAAGA+AGG 0.471799 2_1:-11569560 Msa0194970:CDS
TTGGTGAATTGGTGTTGATT+CGG 0.476681 2_1:+11569700 None:intergenic
GGTGATTAGGGAGGCTGGTA+GGG 0.477415 2_1:-11569192 Msa0194970:CDS
AACTGAAGAAGAAGAAGTGA+AGG 0.481173 2_1:-11569516 Msa0194970:CDS
GGAGGTCCATCCGGTGGGGA+TGG 0.481836 2_1:-11569380 Msa0194970:CDS
AGGAGGTTTGGATTTGGTGC+GGG 0.483449 2_1:+11569865 None:intergenic
GCCTCCCTAATCACCGTCCC+TGG 0.483881 2_1:+11569200 None:intergenic
CAGGATGCAGATTGGTGCTA+AGG 0.485724 2_1:-11569249 Msa0194970:CDS
TCTCGTGAAACGTGGCGTAA+AGG 0.486465 2_1:-11565974 Msa0194970:CDS
ACCTCTCCCTCCATCCCCAC+CGG 0.487820 2_1:+11569370 None:intergenic
GATTAGGGAGGCTGGTAGGG+AGG 0.489143 2_1:-11569189 Msa0194970:CDS
AACAACAACGCCTTCTGTCC+CGG 0.491853 2_1:+11569143 None:intergenic
AAAGCCGGAGACGGAGGGAA+CGG 0.496700 2_1:-11569440 Msa0194970:CDS
GAAGGCGACAAAGTGATTGT+TGG 0.502678 2_1:-11565952 Msa0194970:CDS
ATTGGGAAGCAAAGTTGTAA+AGG 0.507169 2_1:+11567960 None:intergenic
CACACTTGTTCTTGATGGCA+TGG 0.508759 2_1:-11565064 Msa0194970:three_prime_UTR
CTCCCTCCATCCCCACCGGA+TGG 0.510309 2_1:+11569374 None:intergenic
AGGATGCAGATTGGTGCTAA+GGG 0.513323 2_1:-11569248 Msa0194970:CDS
CGGGCAGGGAGGGGTTCACA+TGG 0.515275 2_1:-11569278 Msa0194970:intron
GCGGTTCCGGTGAGGACTTG+TGG 0.516657 2_1:+11569822 None:intergenic
GCGTCGCCGGCGGAGAGGAG+TGG 0.520485 2_1:+11569800 None:intergenic
GTACCGTTTGGAGGTCCATC+CGG 0.522710 2_1:-11569389 Msa0194970:CDS
ACTTCCGTTCCCTCCGTCTC+CGG 0.522717 2_1:+11569436 None:intergenic
GTAGCGAGGGTTGCGTGTGT+TGG 0.522876 2_1:+11569898 None:intergenic
ATTTGGTGCGGGTGGGTACA+CGG 0.523046 2_1:+11569876 None:intergenic
TTGTTGCCAGGTGGAAGAGG+TGG 0.524896 2_1:-11569125 Msa0194970:CDS
CCAGGTGGAAGAGGTGGGAG+AGG 0.525237 2_1:-11569119 Msa0194970:CDS
TTGAGTTTAGGATTTGGAGG+AGG 0.527636 2_1:+11569848 None:intergenic
GGGGTTCACATGGACAAGGC+AGG 0.529117 2_1:-11569268 Msa0194970:CDS
AGTTTGATTTCAGAGGAGGA+AGG 0.529524 2_1:+11569725 None:intergenic
CGGAAGTATGGCATTCAGGC+GGG 0.531074 2_1:-11569420 Msa0194970:CDS
GCTCCGAAGATTGCTGAGAA+TGG 0.532975 2_1:-11569065 Msa0194970:CDS
GTTCATGTAGGAAGCAAGTT+CGG 0.534930 2_1:-11565166 Msa0194970:three_prime_UTR
AAAATGAGATGGCATATTTG+AGG 0.536068 2_1:-11565141 Msa0194970:three_prime_UTR
GGTTTGGATTTGGTGCGGGT+GGG 0.536171 2_1:+11569869 None:intergenic
GTTCTTGATGGCATGGTGCA+AGG 0.540538 2_1:-11565057 Msa0194970:three_prime_UTR
TTGTTGTTGCCAGGTGGAAG+AGG 0.541521 2_1:-11569128 Msa0194970:CDS
CTTTACCGTTATGCTTCTTG+AGG 0.544281 2_1:+11565098 None:intergenic
CGGGTGGGTACACGGTAGCG+AGG 0.544633 2_1:+11569884 None:intergenic
TTCGGAGAGTTTGATTTCAG+AGG 0.547664 2_1:+11569718 None:intergenic
AGGTGAAGAATTCTGGAGTG+AGG 0.548335 2_1:-11569540 Msa0194970:CDS
CCTCTCCCACCTCTTCCACC+TGG 0.549993 2_1:+11569119 None:intergenic
CGTTGATGGTTCATCACCAC+AGG 0.551266 2_1:-11567107 Msa0194970:CDS
CGTTTGGAGGTCCATCCGGT+GGG 0.552725 2_1:-11569385 Msa0194970:CDS
CTACGATTCAACTATGGTAG+TGG 0.558121 2_1:-11567917 Msa0194970:CDS
GTGGTTGTGAAGGTGCCACC+AGG 0.559086 2_1:-11569218 Msa0194970:CDS
GGGACGGTGATTAGGGAGGC+TGG 0.562217 2_1:-11569197 Msa0194970:CDS
TTGTATGAGCGCTGTCAAAA+GGG 0.563051 2_1:-11566921 Msa0194970:CDS
GGACAAGGCAGGATGCAGAT+TGG 0.565589 2_1:-11569257 Msa0194970:CDS
GGAGAGTTTGATTTCAGAGG+AGG 0.566759 2_1:+11569721 None:intergenic
GTAGGTGGTGGCGTCGCCGG+CGG 0.567740 2_1:+11569790 None:intergenic
CCGTTTGGAGGTCCATCCGG+TGG 0.570745 2_1:-11569386 Msa0194970:CDS
GAGGAGGTTTGGATTTGGTG+CGG 0.571529 2_1:+11569864 None:intergenic
CATAGTTGAATCGTAGTCAA+AGG 0.571566 2_1:+11567924 None:intergenic
CTGAAGATGATGAAGAATTG+GGG 0.573252 2_1:-11569586 Msa0194970:CDS
CAAAATGTCCTTGAGGCTTG+TGG 0.573547 2_1:-11566009 Msa0194970:CDS
TCAAAACACCGCATCACCGC+CGG 0.575828 2_1:+11569482 None:intergenic
AGCTGCCTCAAGAAGCATAA+CGG 0.578319 2_1:-11565103 Msa0194970:three_prime_UTR
CTTTGAGCAGTTGAAGACCT+CGG 0.578588 2_1:+11564996 None:intergenic
CAGGTGGAAGAGGTGGGAGA+GGG 0.580361 2_1:-11569118 Msa0194970:CDS
CCACCGGATGGACCTCCAAA+CGG 0.580508 2_1:+11569386 None:intergenic
AAGGATTGCCGGCGGTGATG+CGG 0.581747 2_1:-11569490 Msa0194970:CDS
TGTGCTCCTTCAAGAAGACC+TGG 0.583192 2_1:+11567886 None:intergenic
TCCAGAAGCATACGAAAACT+GGG 0.583546 2_1:-11566987 Msa0194970:CDS
TGGTGGCGTCGCCGGCGGAG+AGG 0.584884 2_1:+11569795 None:intergenic
ATCTTCGCGAAAGCCGGAGA+CGG 0.585928 2_1:-11569449 Msa0194970:CDS
CGACAAAGTGATTGTTGGAG+AGG 0.586228 2_1:-11565947 Msa0194970:intron
TCGCGAAAGCCGGAGACGGA+GGG 0.586944 2_1:-11569445 Msa0194970:CDS
AGGAAAAGTTGCAATCTCAT+GGG 0.588616 2_1:-11566955 Msa0194970:CDS
GATGGTGTATCCGGGACAGA+AGG 0.588814 2_1:-11569153 Msa0194970:CDS
GATGCAGATTGGTGCTAAGG+GGG 0.591936 2_1:-11569246 Msa0194970:CDS
TTCGCGAAAGCCGGAGACGG+AGG 0.592060 2_1:-11569446 Msa0194970:CDS
CAAGTTCGGTCAAAATGAGA+TGG 0.592781 2_1:-11565152 Msa0194970:three_prime_UTR
GTGAAACGTGGCGTAAAGGA+AGG 0.597774 2_1:-11565970 Msa0194970:CDS
AGGCCATTTAATTGACTCTG+TGG 0.602408 2_1:+11565524 None:intergenic
TTAGTCAAGATACATTCGTA+AGG 0.607022 2_1:-11564969 Msa0194970:three_prime_UTR
TGTGAAGGTGCCACCAGGGA+CGG 0.608030 2_1:-11569213 Msa0194970:CDS
ACGGAAGTATGGCATTCAGG+CGG 0.612451 2_1:-11569421 Msa0194970:CDS
CAACACCCACAAGTCCTCAC+CGG 0.612873 2_1:-11569828 Msa0194970:CDS
GGGTGGGTACACGGTAGCGA+GGG 0.615506 2_1:+11569885 None:intergenic
TTTAAGTCTCTCGTGAAACG+TGG 0.617643 2_1:-11565982 Msa0194970:CDS
TCCCTAATCACCGTCCCTGG+TGG 0.618886 2_1:+11569203 None:intergenic
CCTGAGAGGGAGACGAGTGT+AGG 0.619759 2_1:+11569772 None:intergenic
TAAATACACCACAAGCCTCA+AGG 0.620582 2_1:+11566001 None:intergenic
GGGAGGGGTTCACATGGACA+AGG 0.621316 2_1:-11569272 Msa0194970:CDS
TAAAACATATATGTAACCAA+CGG 0.622833 2_1:-11564904 Msa0194970:three_prime_UTR
TGATGAGCAGCAGTTCATGT+AGG 0.626974 2_1:-11565178 Msa0194970:intron
ATTGCTGAGAATGGTGAACA+AGG 0.627576 2_1:-11569056 Msa0194970:intron
GAGAGGGAGACGAGTGTAGG+TGG 0.629633 2_1:+11569775 None:intergenic
AAGATTCCAAAATGTCCTTG+AGG 0.629860 2_1:-11566016 Msa0194970:CDS
AATTTCTGCGACACACTGAA+AGG 0.631516 2_1:-11567840 Msa0194970:CDS
GGATGCAGATTGGTGCTAAG+GGG 0.631737 2_1:-11569247 Msa0194970:CDS
TCGCCGGCGGAGAGGAGTGG+CGG 0.632323 2_1:+11569803 None:intergenic
GAACCGCCACTCCTCTCCGC+CGG 0.632897 2_1:-11569806 Msa0194970:CDS
AGGGAGACGAGTGTAGGTGG+TGG 0.634657 2_1:+11569778 None:intergenic
TAGTTGGTGCTCCAAATGCA+GGG 0.637534 2_1:-11568038 Msa0194970:CDS
ATGAGCGCTGTCAAAAGGGA+AGG 0.638324 2_1:-11566917 Msa0194970:CDS
GTTTGGAGGTCCATCCGGTG+GGG 0.638510 2_1:-11569384 Msa0194970:CDS
ACCAGGGACGGTGATTAGGG+AGG 0.638899 2_1:-11569201 Msa0194970:CDS
CTCCTTCAAGAAGACCTGGA+AGG 0.639991 2_1:+11567890 None:intergenic
TAGTGCTGCAAAGCCAGAGG+TGG 0.645616 2_1:-11567992 Msa0194970:CDS
GAGGAGTGGCGGTTCCGGTG+AGG 0.646720 2_1:+11569814 None:intergenic
CTAGAAGCACCCAATTAGAG+TGG 0.650772 2_1:+11565487 None:intergenic
AAGGCGTTGTTGTTGCCAGG+TGG 0.650877 2_1:-11569134 Msa0194970:CDS
TGTTGCCAGGTGGAAGAGGT+GGG 0.652771 2_1:-11569124 Msa0194970:CDS
TATTAGTGCTGCAAAGCCAG+AGG 0.678097 2_1:-11567995 Msa0194970:CDS
CTTCTTGAAGGAGCACACCG+AGG 0.684238 2_1:-11567880 Msa0194970:CDS
TGGTAACTTCAATCTCACCA+TGG 0.685757 2_1:-11569946 Msa0194970:CDS
ATAGAAATGGGAGAGAACCA+TGG 0.689431 2_1:+11569929 None:intergenic
CATGACCTAAACCAAAACCT+CGG 0.704819 2_1:+11567863 None:intergenic
TGGTTGTGAAGGTGCCACCA+GGG 0.718648 2_1:-11569217 Msa0194970:CDS
TCAAACTCAAGATCTGCCTG+TGG 0.718680 2_1:+11567091 None:intergenic
GAAGGAGAAAGGATTGCCGG+CGG 0.728649 2_1:-11569498 Msa0194970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAAATTTTGATTTGA+AGG - chr2_1:11565829-11565848 Msa0194970:intron 10.0%
!!! TTTTAAAATTTTGATTTGAA+GGG - chr2_1:11565830-11565849 Msa0194970:intron 10.0%
!!! CTTGTTTTTTTTTTTTTTTT+TGG - chr2_1:11566296-11566315 Msa0194970:intron 10.0%
!!! AAACTTGATATTTTTTTTCA+TGG + chr2_1:11566464-11566483 None:intergenic 15.0%
!! TACATATCTATCTTATATTT+GGG - chr2_1:11566900-11566919 Msa0194970:intron 15.0%
!!! TTTAAAATTAGTCTTTACAT+TGG - chr2_1:11567494-11567513 Msa0194970:intron 15.0%
!!! TTAAAATTAGTCTTTACATT+GGG - chr2_1:11567495-11567514 Msa0194970:intron 15.0%
!! ATCTTACATACATTATTTAT+TGG - chr2_1:11569699-11569718 Msa0194970:CDS 15.0%
!! AAAACACATAGTATATCTTA+TGG + chr2_1:11565643-11565662 None:intergenic 20.0%
!!! AGAGAAATGATACTTTTTTT+TGG - chr2_1:11565864-11565883 Msa0194970:intron 20.0%
!! CCAATCAAAAATACAAATAT+GGG + chr2_1:11566126-11566145 None:intergenic 20.0%
!! ACCAATCAAAAATACAAATA+TGG + chr2_1:11566127-11566146 None:intergenic 20.0%
!! ACTATCAAATATAATCTTAG+AGG + chr2_1:11566219-11566238 None:intergenic 20.0%
!! CTACATATCTATCTTATATT+TGG - chr2_1:11566899-11566918 Msa0194970:intron 20.0%
!! AAAAAAATCGTTTAAGAGAA+GGG + chr2_1:11567017-11567036 None:intergenic 20.0%
!! AAAAAAAATCGTTTAAGAGA+AGG + chr2_1:11567018-11567037 None:intergenic 20.0%
!! ACACTTGAAATATATAACTT+AGG - chr2_1:11567043-11567062 Msa0194970:CDS 20.0%
!! CAAAAATAAAGGTAAGATAA+CGG + chr2_1:11567175-11567194 None:intergenic 20.0%
!! TATATCAATGTTTAAACCAA+TGG + chr2_1:11567338-11567357 None:intergenic 20.0%
!!! ATTTTAAACAGCAGATTTAA+GGG + chr2_1:11567482-11567501 None:intergenic 20.0%
!!! AATTTTAAACAGCAGATTTA+AGG + chr2_1:11567483-11567502 None:intergenic 20.0%
!! TTGTTATAAGCAACTATAAA+TGG + chr2_1:11567623-11567642 None:intergenic 20.0%
!! TATAGTTGCTTATAACAAAA+TGG - chr2_1:11567625-11567644 Msa0194970:intron 20.0%
!! TTTACAGAAAAAGAATAATC+TGG + chr2_1:11567864-11567883 None:intergenic 20.0%
!! GAATAGCATGAAAAATATAA+TGG - chr2_1:11568451-11568470 Msa0194970:intron 20.0%
!!! TATTTAATTAGAGTATTGAC+AGG + chr2_1:11569259-11569278 None:intergenic 20.0%
!!! AAATATCAAGATTTTCAACT+AGG - chr2_1:11569410-11569429 Msa0194970:CDS 20.0%
!!! AATATCAAGATTTTCAACTA+GGG - chr2_1:11569411-11569430 Msa0194970:CDS 20.0%
!! TAAAACATATATGTAACCAA+CGG - chr2_1:11569735-11569754 Msa0194970:CDS 20.0%
!!! ATTTTATGAAATTAGAGTGA+AGG - chr2_1:11569867-11569886 Msa0194970:CDS 20.0%
! TTGGAACAAGATATAGAAAT+GGG + chr2_1:11564725-11564744 None:intergenic 25.0%
!! GAAATCAATGGTAATTTTGA+AGG - chr2_1:11565019-11565038 Msa0194970:three_prime_UTR 25.0%
!!! AATGGTAATTTTGAAGGAAT+TGG - chr2_1:11565025-11565044 Msa0194970:three_prime_UTR 25.0%
!!! GATGTTTTAAAAACCAAACT+AGG - chr2_1:11565672-11565691 Msa0194970:intron 25.0%
! TACTTTAAACCATTAAAACC+AGG + chr2_1:11565763-11565782 None:intergenic 25.0%
! AAAGTAGTTGAACTATGATT+CGG - chr2_1:11565777-11565796 Msa0194970:intron 25.0%
! TGTAGGTTTGATGTTTAATT+CGG - chr2_1:11565806-11565825 Msa0194970:intron 25.0%
! AAAACACACATAAAAACCAA+AGG + chr2_1:11565928-11565947 None:intergenic 25.0%
!!! CCCATATTTGTATTTTTGAT+TGG - chr2_1:11566123-11566142 Msa0194970:intron 25.0%
!!! AAACTAGACTTGTTTTTGTT+TGG - chr2_1:11566400-11566419 Msa0194970:intron 25.0%
!! ATTTTATATAGTTAGGCACT+TGG - chr2_1:11566875-11566894 Msa0194970:intron 25.0%
!! TTTTATATAGTTAGGCACTT+GGG - chr2_1:11566876-11566895 Msa0194970:intron 25.0%
!!! TAGAGTTTTTTGAAGGAAAA+AGG + chr2_1:11566984-11567003 None:intergenic 25.0%
!!! TGAAGTTTAGAGTTTTTTGA+AGG + chr2_1:11566991-11567010 None:intergenic 25.0%
!! TGTTTGCTTATTTAAGCTTT+TGG - chr2_1:11567136-11567155 Msa0194970:intron 25.0%
! ACGGAAAAAAGCAAAAATAA+AGG + chr2_1:11567186-11567205 None:intergenic 25.0%
! TATCTACTAATCGATTGATT+TGG + chr2_1:11567236-11567255 None:intergenic 25.0%
! AAAAATCTCAAAATCACTGA+TGG + chr2_1:11567986-11568005 None:intergenic 25.0%
! CATGTAATAAAACTACAATC+TGG + chr2_1:11568158-11568177 None:intergenic 25.0%
! GACAAATATAGAAAAAATGC+AGG + chr2_1:11568249-11568268 None:intergenic 25.0%
!!! TTTTTCATGCTATTCTAGAA+CGG + chr2_1:11568446-11568465 None:intergenic 25.0%
!! TGTTAGTAAAAAAGTGTATC+AGG - chr2_1:11568510-11568529 Msa0194970:intron 25.0%
!! ATTTTCCAGGAAATTGTTAT+AGG + chr2_1:11569326-11569345 None:intergenic 25.0%
!!! ACATTATTTATTGGCTTGAA+TGG - chr2_1:11569708-11569727 Msa0194970:CDS 25.0%
GTTGGAACAAGATATAGAAA+TGG + chr2_1:11564726-11564745 None:intergenic 30.0%
GAAGAAGAAGAAGAAATCAA+TGG - chr2_1:11565007-11565026 Msa0194970:three_prime_UTR 30.0%
TCTGAAGATGATGAAGAATT+GGG - chr2_1:11565052-11565071 Msa0194970:three_prime_UTR 30.0%
AAATGAATCCCATTCCTAAA+CGG + chr2_1:11565340-11565359 None:intergenic 30.0%
! TTAGGAATGGGATTCATTTT+CGG - chr2_1:11565341-11565360 Msa0194970:intron 30.0%
ACACATAGTATATCTTATGG+TGG + chr2_1:11565640-11565659 None:intergenic 30.0%
ACTAATTAAACTGCCTAGTT+TGG + chr2_1:11565688-11565707 None:intergenic 30.0%
AACTGACATTGTCTATTGTA+CGG - chr2_1:11565717-11565736 Msa0194970:intron 30.0%
! ATTCAAACACAATTTTGTCC+TGG - chr2_1:11565742-11565761 Msa0194970:intron 30.0%
!!! CAATTTTGTCCTGGTTTTAA+TGG - chr2_1:11565751-11565770 Msa0194970:intron 30.0%
!!! TTGATTTGAAGGGTGTTTTT+AGG - chr2_1:11565840-11565859 Msa0194970:intron 30.0%
TGGAAGTTAAAAGTAAGACA+TGG - chr2_1:11565966-11565985 Msa0194970:CDS 30.0%
GTCATTTAAACATCGAAACA+CGG + chr2_1:11566023-11566042 None:intergenic 30.0%
TTAGAGGAACAAAACTGAAA+AGG + chr2_1:11566203-11566222 None:intergenic 30.0%
TTATTCTTGTTCGAGATTGT+TGG - chr2_1:11566436-11566455 Msa0194970:intron 30.0%
TATTCTTGTTCGAGATTGTT+GGG - chr2_1:11566437-11566456 Msa0194970:intron 30.0%
!!! TTCTTTTGTTTTCCTGAATC+TGG - chr2_1:11566484-11566503 Msa0194970:intron 30.0%
! CGTATATGAATTTGAAACTC+AGG + chr2_1:11566510-11566529 None:intergenic 30.0%
!!! AATGCTGGTTTCTTTTGATT+AGG - chr2_1:11566538-11566557 Msa0194970:intron 30.0%
CAATACGAAGTTAGATCAAA+AGG + chr2_1:11567078-11567097 None:intergenic 30.0%
GAGATATAACAGTTATCAGA+CGG + chr2_1:11567205-11567224 None:intergenic 30.0%
AACATAAAGACATTCAGAGT+GGG + chr2_1:11567268-11567287 None:intergenic 30.0%
TCCAAAAATTCATTGTTCCA+AGG - chr2_1:11567307-11567326 Msa0194970:intron 30.0%
CCAAAAATTCATTGTTCCAA+GGG - chr2_1:11567308-11567327 Msa0194970:intron 30.0%
ACACTCATAAGCTAAATAGA+TGG + chr2_1:11567365-11567384 None:intergenic 30.0%
GCGTAAAAATAAAGAAGACA+GGG - chr2_1:11567781-11567800 Msa0194970:intron 30.0%
TAAAAATAAAGAAGACAGGG+AGG - chr2_1:11567784-11567803 Msa0194970:intron 30.0%
CTGTAAAACTTCTTTGCATT+TGG - chr2_1:11567877-11567896 Msa0194970:CDS 30.0%
ATGATAGCAGTTCAAATGTT+TGG - chr2_1:11568007-11568026 Msa0194970:CDS 30.0%
GTAATAAAACTACAATCTGG+TGG + chr2_1:11568155-11568174 None:intergenic 30.0%
CTTACTTATGTGATCACAAA+TGG + chr2_1:11568279-11568298 None:intergenic 30.0%
CATTTGTGATCACATAAGTA+AGG - chr2_1:11568277-11568296 Msa0194970:intron 30.0%
!!! TTTTTTGGCAAAGTCTAGAA+AGG + chr2_1:11568408-11568427 None:intergenic 30.0%
AGCATGAAAAATATAATGGC+TGG - chr2_1:11568455-11568474 Msa0194970:intron 30.0%
!!! GACATTTTGGAATCTTTTCT+CGG + chr2_1:11568619-11568638 None:intergenic 30.0%
TTGAAACATTGCTTCCTTAA+AGG - chr2_1:11568835-11568854 Msa0194970:intron 30.0%
ATCTTATTGCTGATGTTTCT+AGG + chr2_1:11568925-11568944 None:intergenic 30.0%
AGAAACATCAGCAATAAGAT+AGG - chr2_1:11568925-11568944 Msa0194970:intron 30.0%
GAAACATCAGCAATAAGATA+GGG - chr2_1:11568926-11568945 Msa0194970:intron 30.0%
AAACATCAGCAATAAGATAG+GGG - chr2_1:11568927-11568946 Msa0194970:intron 30.0%
CTGATACATAGCAAAACAAA+TGG + chr2_1:11569037-11569056 None:intergenic 30.0%
!! TTGTTTTGCTATGTATCAGA+TGG - chr2_1:11569038-11569057 Msa0194970:intron 30.0%
!!! GCAAGACCTTATTTTCATAA+TGG - chr2_1:11569207-11569226 Msa0194970:CDS 30.0%
GCGATACCATTATGAAAATA+AGG + chr2_1:11569216-11569235 None:intergenic 30.0%
ACAGCATTTAGCATTTACTA+TGG - chr2_1:11569283-11569302 Msa0194970:intron 30.0%
! CCATTATGTACAAATTTTCC+AGG + chr2_1:11569339-11569358 None:intergenic 30.0%
CCTGGAAAATTTGTACATAA+TGG - chr2_1:11569336-11569355 Msa0194970:intron 30.0%
AAAATGAGATGGCATATTTG+AGG - chr2_1:11569498-11569517 Msa0194970:CDS 30.0%
AATTACACACTTGTTCTTGA+TGG - chr2_1:11569570-11569589 Msa0194970:CDS 30.0%
TTAGTCAAGATACATTCGTA+AGG - chr2_1:11569670-11569689 Msa0194970:CDS 30.0%
! ACAATTAGATTTTCTTCCGT+TGG + chr2_1:11569754-11569773 None:intergenic 30.0%
!! TGTTGTAACAGTTTTGTGAT+AGG - chr2_1:11569795-11569814 Msa0194970:CDS 30.0%
! AACACTTTTATGATCACTTC+TGG + chr2_1:11569910-11569929 None:intergenic 30.0%
!! TTGGTGAATTGGTGTTGATT+CGG + chr2_1:11564942-11564961 None:intergenic 35.0%
GTCTGAAGATGATGAAGAAT+TGG - chr2_1:11565051-11565070 Msa0194970:three_prime_UTR 35.0%
CTGAAGATGATGAAGAATTG+GGG - chr2_1:11565053-11565072 Msa0194970:three_prime_UTR 35.0%
TGATGAAGAATTGGGGTTTA+TGG - chr2_1:11565060-11565079 Msa0194970:three_prime_UTR 35.0%
TTGAAGAAGGTGAAGAATTC+TGG - chr2_1:11565092-11565111 Msa0194970:three_prime_UTR 35.0%
AACTGAAGAAGAAGAAGTGA+AGG - chr2_1:11565123-11565142 Msa0194970:three_prime_UTR 35.0%
TGAATTCGTTGTTACCGTTT+AGG - chr2_1:11565323-11565342 Msa0194970:intron 35.0%
! TAGGAATGGGATTCATTTTC+GGG - chr2_1:11565342-11565361 Msa0194970:intron 35.0%
TGATACTTTGATGTCCAGTA+TGG - chr2_1:11565899-11565918 Msa0194970:intron 35.0%
! TTTTAAATGCCTGCAAGTTG+TGG - chr2_1:11565946-11565965 Msa0194970:intron 35.0%
!!! TTTTAACTTCCACAACTTGC+AGG + chr2_1:11565958-11565977 None:intergenic 35.0%
GACATGGAGATAAGCATATA+CGG - chr2_1:11565982-11566001 Msa0194970:CDS 35.0%
GAAAGAAGTCATGACTTTAG+AGG - chr2_1:11566099-11566118 Msa0194970:intron 35.0%
! AACAAGTCTAGTTTCAGACA+TGG + chr2_1:11566282-11566301 None:intergenic 35.0%
!!! TTTTTTTTTGGCTTTCGCAC+CGG - chr2_1:11566308-11566327 Msa0194970:intron 35.0%
! AACAAGTCTAGTTTCAGACA+TGG + chr2_1:11566282-11566301 None:intergenic 35.0%
ATTCTTGTTCGAGATTGTTG+GGG - chr2_1:11566438-11566457 Msa0194970:intron 35.0%
ATATACGAGTCTAAGAATGC+TGG - chr2_1:11566523-11566542 Msa0194970:intron 35.0%
!! GTTTCTTTTGATTAGGTGGT+TGG - chr2_1:11566545-11566564 Msa0194970:intron 35.0%
TTGGGAAGCAAAGTTGTAAA+GGG + chr2_1:11566681-11566700 None:intergenic 35.0%
ATTGGGAAGCAAAGTTGTAA+AGG + chr2_1:11566682-11566701 None:intergenic 35.0%
CATAGTTGAATCGTAGTCAA+AGG + chr2_1:11566718-11566737 None:intergenic 35.0%
CTTTGACTACGATTCAACTA+TGG - chr2_1:11566716-11566735 Msa0194970:intron 35.0%
TTGAAGGAAAAAGGAAAGCA+AGG + chr2_1:11566975-11566994 None:intergenic 35.0%
!! TAATCGATTGATTTGGAGTC+TGG + chr2_1:11567229-11567248 None:intergenic 35.0%
CAACATAAAGACATTCAGAG+TGG + chr2_1:11567269-11567288 None:intergenic 35.0%
! CCCTTGGAACAATGAATTTT+TGG + chr2_1:11567311-11567330 None:intergenic 35.0%
TTAAACCAATGGATAACCCT+TGG + chr2_1:11567327-11567346 None:intergenic 35.0%
! ATTTTTCTGTATGAACCCTC+TGG - chr2_1:11567397-11567416 Msa0194970:intron 35.0%
TGAAATAGCATACTACCAGA+GGG + chr2_1:11567415-11567434 None:intergenic 35.0%
TTGAAATAGCATACTACCAG+AGG + chr2_1:11567416-11567435 None:intergenic 35.0%
ATTTAAGGGTGAGAAAATGG+AGG + chr2_1:11567468-11567487 None:intergenic 35.0%
CAGATTTAAGGGTGAGAAAA+TGG + chr2_1:11567471-11567490 None:intergenic 35.0%
TTTCAGATACATGTCGTTGA+TGG - chr2_1:11567518-11567537 Msa0194970:intron 35.0%
! AGATTGCAACTTTTCCTTGA+AGG + chr2_1:11567681-11567700 None:intergenic 35.0%
AAGGAAAAGTTGCAATCTCA+TGG - chr2_1:11567683-11567702 Msa0194970:intron 35.0%
AGGAAAAGTTGCAATCTCAT+GGG - chr2_1:11567684-11567703 Msa0194970:intron 35.0%
GGCGTAAAAATAAAGAAGAC+AGG - chr2_1:11567780-11567799 Msa0194970:intron 35.0%
CTAATCTAACCTGTTTCAGA+TGG - chr2_1:11567901-11567920 Msa0194970:CDS 35.0%
! GTTTTGTCCAGATGACAAAT+TGG - chr2_1:11568055-11568074 Msa0194970:intron 35.0%
!!! AACAATAGCCAGCTACTTTT+TGG + chr2_1:11568367-11568386 None:intergenic 35.0%
AAAAAGTAGCTGGCTATTGT+TGG - chr2_1:11568366-11568385 Msa0194970:intron 35.0%
ACATGTATCAAGTATCAGAG+AGG + chr2_1:11568493-11568512 None:intergenic 35.0%
! AAACCGGTGAATCTTTTAAC+AGG - chr2_1:11568583-11568602 Msa0194970:intron 35.0%
GTACCTGTTAAAAGATTCAC+CGG + chr2_1:11568589-11568608 None:intergenic 35.0%
AAGATTCCAAAATGTCCTTG+AGG - chr2_1:11568623-11568642 Msa0194970:intron 35.0%
CGAATGAAGCAATTAGCATA+TGG - chr2_1:11568770-11568789 Msa0194970:intron 35.0%
AAACATTGCTTCCTTAAAGG+TGG - chr2_1:11568838-11568857 Msa0194970:intron 35.0%
TAGTGTTTGTTCCACCTTTA+AGG + chr2_1:11568852-11568871 None:intergenic 35.0%
CAAATTCTAGGTTACTCTTG+AGG + chr2_1:11568895-11568914 None:intergenic 35.0%
CTAGGCTAGAAACAAATTCT+AGG + chr2_1:11568907-11568926 None:intergenic 35.0%
TAGCAAAACAAATGGTCACT+GGG + chr2_1:11569029-11569048 None:intergenic 35.0%
ATAGCAAAACAAATGGTCAC+TGG + chr2_1:11569030-11569049 None:intergenic 35.0%
TGTATCAGATGGAGATGATA+TGG - chr2_1:11569049-11569068 Msa0194970:intron 35.0%
TGTCCACAGAGTCAATTAAA+TGG - chr2_1:11569112-11569131 Msa0194970:CDS 35.0%
AGTCAATTAAATGGCCTGAA+TGG - chr2_1:11569121-11569140 Msa0194970:CDS 35.0%
GAAGTAATGCCACTCTAATT+GGG - chr2_1:11569143-11569162 Msa0194970:CDS 35.0%
TTTCGTAGTTGCAGTACATA+TGG + chr2_1:11569180-11569199 None:intergenic 35.0%
ATGTACTGCAACTACGAAAT+AGG - chr2_1:11569181-11569200 Msa0194970:CDS 35.0%
!! TAGAGTATTGACAGGTTTCA+TGG + chr2_1:11569251-11569270 None:intergenic 35.0%
! ACTTTTATGATCACTTCTGG+TGG + chr2_1:11569907-11569926 None:intergenic 35.0%
TGGTAACTTCAATCTCACCA+TGG - chr2_1:11564693-11564712 Msa0194970:three_prime_UTR 40.0%
ATAGAAATGGGAGAGAACCA+TGG + chr2_1:11564713-11564732 None:intergenic 40.0%
ATTTGGAGGAGGTTTGGATT+TGG + chr2_1:11564783-11564802 None:intergenic 40.0%
! TTTAGGATTTGGAGGAGGTT+TGG + chr2_1:11564789-11564808 None:intergenic 40.0%
! TTGAGTTTAGGATTTGGAGG+AGG + chr2_1:11564794-11564813 None:intergenic 40.0%
! GTGTTGAGTTTAGGATTTGG+AGG + chr2_1:11564797-11564816 None:intergenic 40.0%
!! TGGGTGTTGAGTTTAGGATT+TGG + chr2_1:11564800-11564819 None:intergenic 40.0%
! AGTTTGATTTCAGAGGAGGA+AGG + chr2_1:11564917-11564936 None:intergenic 40.0%
! TTCGGAGAGTTTGATTTCAG+AGG + chr2_1:11564924-11564943 None:intergenic 40.0%
TTGTGGAGCAATTGGTGAAT+TGG + chr2_1:11564953-11564972 None:intergenic 40.0%
TATCGAGTTTGTGGAGCAAT+TGG + chr2_1:11564961-11564980 None:intergenic 40.0%
CATCATCGTTATCGAGTTTG+TGG + chr2_1:11564970-11564989 None:intergenic 40.0%
AGAATTGGGGTTTATGGATG+AGG - chr2_1:11565066-11565085 Msa0194970:three_prime_UTR 40.0%
ATGGATGAGGAGATTGAAGA+AGG - chr2_1:11565079-11565098 Msa0194970:three_prime_UTR 40.0%
GAAGAAGAAGTGAAGGAGAA+AGG - chr2_1:11565130-11565149 Msa0194970:three_prime_UTR 40.0%
TCGTTGTTACCGTTTAGGAA+TGG - chr2_1:11565328-11565347 Msa0194970:intron 40.0%
CGTTGTTACCGTTTAGGAAT+GGG - chr2_1:11565329-11565348 Msa0194970:intron 40.0%
!! GATTTTGGAGATGGTGTATC+CGG - chr2_1:11565477-11565496 Msa0194970:three_prime_UTR 40.0%
!! ATTTTGGAGATGGTGTATCC+GGG - chr2_1:11565478-11565497 Msa0194970:three_prime_UTR 40.0%
!!! GGAATGCTGCTTTTAAGAGT+GGG - chr2_1:11565542-11565561 Msa0194970:CDS 40.0%
TCACCATTCTCAGCAATCTT+CGG + chr2_1:11565580-11565599 None:intergenic 40.0%
ATTGCTGAGAATGGTGAACA+AGG - chr2_1:11565583-11565602 Msa0194970:CDS 40.0%
! GTAGTTGAACTATGATTCGG+TGG - chr2_1:11565780-11565799 Msa0194970:intron 40.0%
AAAACCAAAGGACACCATAC+TGG + chr2_1:11565916-11565935 None:intergenic 40.0%
GAGTATGTAACGTATGTGAG+TGG - chr2_1:11566147-11566166 Msa0194970:intron 40.0%
TGGCATTAAAAGCGAGCATA+TGG - chr2_1:11566167-11566186 Msa0194970:intron 40.0%
ATTAAAAGCGAGCATATGGC+TGG - chr2_1:11566171-11566190 Msa0194970:intron 40.0%
TGTCCACAGTCCATAACAAA+CGG - chr2_1:11566243-11566262 Msa0194970:intron 40.0%
!! GCTGGTTTCTTTTGATTAGG+TGG - chr2_1:11566541-11566560 Msa0194970:intron 40.0%
GTTGGAGTTAGAACTTAAGC+TGG - chr2_1:11566563-11566582 Msa0194970:intron 40.0%
GTTGCAGATGTTGGTATAGT+TGG - chr2_1:11566585-11566604 Msa0194970:intron 40.0%
TACAACTTTGCTTCCCAATC+TGG - chr2_1:11566683-11566702 Msa0194970:intron 40.0%
ACAACTTTGCTTCCCAATCT+GGG - chr2_1:11566684-11566703 Msa0194970:intron 40.0%
CTACGATTCAACTATGGTAG+TGG - chr2_1:11566722-11566741 Msa0194970:intron 40.0%
CATGACCTAAACCAAAACCT+CGG + chr2_1:11566779-11566798 None:intergenic 40.0%
AATTTCTGCGACACACTGAA+AGG - chr2_1:11566799-11566818 Msa0194970:intron 40.0%
TTGTTCCAAGGGTTATCCAT+TGG - chr2_1:11567319-11567338 Msa0194970:intron 40.0%
! TTCCAGAAGCATACGAAAAC+TGG - chr2_1:11567651-11567670 Msa0194970:intron 40.0%
! TCCAGAAGCATACGAAAACT+GGG - chr2_1:11567652-11567671 Msa0194970:intron 40.0%
TTGACAGCGCTCATACAAAA+AGG + chr2_1:11567716-11567735 None:intergenic 40.0%
! TTTGTATGAGCGCTGTCAAA+AGG - chr2_1:11567717-11567736 Msa0194970:intron 40.0%
! TTGTATGAGCGCTGTCAAAA+GGG - chr2_1:11567718-11567737 Msa0194970:intron 40.0%
! ATATCTCGTCCATCTGAAAC+AGG + chr2_1:11567913-11567932 None:intergenic 40.0%
TGTTTCAGATGGACGAGATA+TGG - chr2_1:11567912-11567931 Msa0194970:CDS 40.0%
! TCAAATGTTTGGAGCGTAGT+TGG - chr2_1:11568018-11568037 Msa0194970:CDS 40.0%
TTGTCCAGATGACAAATTGG+CGG - chr2_1:11568058-11568077 Msa0194970:intron 40.0%
AGCCTAAACCAAAAAGTAGC+TGG - chr2_1:11568356-11568375 Msa0194970:intron 40.0%
!!! AGCCAGCTACTTTTTGGTTT+AGG + chr2_1:11568361-11568380 None:intergenic 40.0%
TCAAGTATCAGAGAGGAGAA+TGG + chr2_1:11568486-11568505 None:intergenic 40.0%
TGAATGGAGGTGGAAATTTC+AGG + chr2_1:11568548-11568567 None:intergenic 40.0%
GAAATTTCCACCTCCATTCA+TGG - chr2_1:11568548-11568567 Msa0194970:intron 40.0%
ATGAGACTATCCATGAATGG+AGG + chr2_1:11568561-11568580 None:intergenic 40.0%
TCCATTCATGGATAGTCTCA+TGG - chr2_1:11568560-11568579 Msa0194970:intron 40.0%
TCCATGAGACTATCCATGAA+TGG + chr2_1:11568564-11568583 None:intergenic 40.0%
ATGGATAGTCTCATGGAAAC+CGG - chr2_1:11568567-11568586 Msa0194970:intron 40.0%
TAAATACACCACAAGCCTCA+AGG + chr2_1:11568641-11568660 None:intergenic 40.0%
TTTAAGTCTCTCGTGAAACG+TGG - chr2_1:11568657-11568676 Msa0194970:intron 40.0%
CATGACTCCTCAAACAAATC+TGG - chr2_1:11569072-11569091 Msa0194970:CDS 40.0%
! TGATGCACCAGATTTGTTTG+AGG + chr2_1:11569082-11569101 None:intergenic 40.0%
! AGGCCATTTAATTGACTCTG+TGG + chr2_1:11569118-11569137 None:intergenic 40.0%
GGAAGTAATGCCACTCTAAT+TGG - chr2_1:11569142-11569161 Msa0194970:CDS 40.0%
CCAGGAAATTGTTATAGGCT+CGG + chr2_1:11569321-11569340 None:intergenic 40.0%
GTTCATGTAGGAAGCAAGTT+CGG - chr2_1:11569473-11569492 Msa0194970:CDS 40.0%
CAAGTTCGGTCAAAATGAGA+TGG - chr2_1:11569487-11569506 Msa0194970:CDS 40.0%
CTTTACCGTTATGCTTCTTG+AGG + chr2_1:11569544-11569563 None:intergenic 40.0%
!! TTTTATTTGACGTGAAGCCG+AGG - chr2_1:11569626-11569645 Msa0194970:intron 40.0%
!! GACTTGTGGGTGTTGAGTTT+AGG + chr2_1:11564806-11564825 None:intergenic 45.0%
AAGAGAAGTCTTCCCTGAGA+GGG + chr2_1:11564883-11564902 None:intergenic 45.0%
! GGAGAGTTTGATTTCAGAGG+AGG + chr2_1:11564921-11564940 None:intergenic 45.0%
!! AGGTGAAGAATTCTGGAGTG+AGG - chr2_1:11565099-11565118 Msa0194970:three_prime_UTR 45.0%
AGTGAAGGAGAAAGGATTGC+CGG - chr2_1:11565138-11565157 Msa0194970:three_prime_UTR 45.0%
GAGAAATACGTACCGTTTGG+AGG - chr2_1:11565241-11565260 Msa0194970:intron 45.0%
!! AATGGGATTCATTTTCGGGC+AGG - chr2_1:11565346-11565365 Msa0194970:intron 45.0%
!! ATGGGATTCATTTTCGGGCA+GGG - chr2_1:11565347-11565366 Msa0194970:intron 45.0%
!! AGGATGCAGATTGGTGCTAA+GGG - chr2_1:11565391-11565410 Msa0194970:intron 45.0%
!!! GGGAATGCTGCTTTTAAGAG+TGG - chr2_1:11565541-11565560 Msa0194970:CDS 45.0%
!! CTATGATTCGGTGGTCTTGT+AGG - chr2_1:11565789-11565808 Msa0194970:intron 45.0%
ATGTCCAGTATGGTGTCCTT+TGG - chr2_1:11565909-11565928 Msa0194970:intron 45.0%
TGACTTTCCTACAGAGGACA+CGG + chr2_1:11566058-11566077 None:intergenic 45.0%
AAGTCGTGACTTTCCTACAG+AGG + chr2_1:11566064-11566083 None:intergenic 45.0%
!! TCTCCGTTTGTTATGGACTG+TGG + chr2_1:11566249-11566268 None:intergenic 45.0%
! CGCATCATCTCCGTTTGTTA+TGG + chr2_1:11566256-11566275 None:intergenic 45.0%
TAACAAACGGAGATGATGCG+TGG - chr2_1:11566256-11566275 Msa0194970:intron 45.0%
TTGAAACTCAGGCCAGATTC+AGG + chr2_1:11566499-11566518 None:intergenic 45.0%
CTTAAGCTGGTTGCAGATGT+TGG - chr2_1:11566576-11566595 Msa0194970:intron 45.0%
! ATAGTTGGTGCTCCAAATGC+AGG - chr2_1:11566600-11566619 Msa0194970:intron 45.0%
! TAGTTGGTGCTCCAAATGCA+GGG - chr2_1:11566601-11566620 Msa0194970:intron 45.0%
AGTGTACTCTTCCCTGCATT+TGG + chr2_1:11566615-11566634 None:intergenic 45.0%
TATTAGTGCTGCAAAGCCAG+AGG - chr2_1:11566644-11566663 Msa0194970:intron 45.0%
! AAGGGATAATTTGCCACCTC+TGG + chr2_1:11566663-11566682 None:intergenic 45.0%
AAGGAAACAACGCCCAGATT+GGG + chr2_1:11566699-11566718 None:intergenic 45.0%
AAAGGAAACAACGCCCAGAT+TGG + chr2_1:11566700-11566719 None:intergenic 45.0%
GTTAGATCAAAAGGTCGCAG+TGG + chr2_1:11567069-11567088 None:intergenic 45.0%
! AAAGACATTCAGAGTGGGCT+GGG + chr2_1:11567263-11567282 None:intergenic 45.0%
TAAAGACATTCAGAGTGGGC+TGG + chr2_1:11567264-11567283 None:intergenic 45.0%
TCAAACTCAAGATCTGCCTG+TGG + chr2_1:11567551-11567570 None:intergenic 45.0%
AATGGCTTCTCAGCAAGTTC+AGG + chr2_1:11567605-11567624 None:intergenic 45.0%
! TCCCAGTTTTCGTATGCTTC+TGG + chr2_1:11567656-11567675 None:intergenic 45.0%
CGAAAACTGGGAATCCTTCA+AGG - chr2_1:11567664-11567683 Msa0194970:intron 45.0%
TATGCGCTGCTTATGAGCTT+TGG - chr2_1:11567759-11567778 Msa0194970:intron 45.0%
GAAGACAGGGAGGAATATGA+AGG - chr2_1:11567794-11567813 Msa0194970:intron 45.0%
AGACTATCCATGAATGGAGG+TGG + chr2_1:11568558-11568577 None:intergenic 45.0%
! CACAAGCCTCAAGGACATTT+TGG + chr2_1:11568632-11568651 None:intergenic 45.0%
CAAAATGTCCTTGAGGCTTG+TGG - chr2_1:11568630-11568649 Msa0194970:intron 45.0%
GAAGGCGACAAAGTGATTGT+TGG - chr2_1:11568687-11568706 Msa0194970:intron 45.0%
CGACAAAGTGATTGTTGGAG+AGG - chr2_1:11568692-11568711 Msa0194970:intron 45.0%
CTTCATTCGTCATGCTAGCA+AGG + chr2_1:11568759-11568778 None:intergenic 45.0%
TGGTCACTGGGTATGAATCA+TGG + chr2_1:11569017-11569036 None:intergenic 45.0%
GAGTGGCATTACTTCCATTC+AGG + chr2_1:11569138-11569157 None:intergenic 45.0%
!! CTAGAAGCACCCAATTAGAG+TGG + chr2_1:11569155-11569174 None:intergenic 45.0%
CAGGTTTCATGGAGATAGCA+AGG + chr2_1:11569240-11569259 None:intergenic 45.0%
CCGAGCCTATAACAATTTCC+TGG - chr2_1:11569318-11569337 Msa0194970:intron 45.0%
TGATGAGCAGCAGTTCATGT+AGG - chr2_1:11569461-11569480 Msa0194970:CDS 45.0%
! AGCTGCCTCAAGAAGCATAA+CGG - chr2_1:11569536-11569555 Msa0194970:CDS 45.0%
! CACACTTGTTCTTGATGGCA+TGG - chr2_1:11569575-11569594 Msa0194970:CDS 45.0%
CTTTGAGCAGTTGAAGACCT+CGG + chr2_1:11569646-11569665 None:intergenic 45.0%
!!! TTATTATATTTTATATAGTT+AGG - chr2_1:11566868-11566887 Msa0194970:intron 5.0%
!!! TTCTTTTTTTTTTTTTTTTT+TGG + chr2_1:11568423-11568442 None:intergenic 5.0%
!! AGGAGGTTTGGATTTGGTGC+GGG + chr2_1:11564777-11564796 None:intergenic 50.0%
!! GAGGAGGTTTGGATTTGGTG+CGG + chr2_1:11564778-11564797 None:intergenic 50.0%
GAAGAGAAGTCTTCCCTGAG+AGG + chr2_1:11564884-11564903 None:intergenic 50.0%
AGAGGAGGAAGGTGAGAAAG+TGG + chr2_1:11564906-11564925 None:intergenic 50.0%
! CTTTCGCGAAGATTTTCGCC+CGG + chr2_1:11565183-11565202 None:intergenic 50.0%
GCGAAAATCTTCGCGAAAGC+CGG - chr2_1:11565184-11565203 Msa0194970:intron 50.0%
! GGAACGGAAGTATGGCATTC+AGG - chr2_1:11565215-11565234 Msa0194970:intron 50.0%
! ACGGAAGTATGGCATTCAGG+CGG - chr2_1:11565218-11565237 Msa0194970:intron 50.0%
CGGGAGAAATACGTACCGTT+TGG - chr2_1:11565238-11565257 Msa0194970:intron 50.0%
GAGAGGTGGAAATGTGTACG+TGG - chr2_1:11565285-11565304 Msa0194970:intron 50.0%
!! GATTCATTTTCGGGCAGGGA+GGG - chr2_1:11565351-11565370 Msa0194970:intron 50.0%
!! ATTCATTTTCGGGCAGGGAG+GGG - chr2_1:11565352-11565371 Msa0194970:intron 50.0%
!! CAGGATGCAGATTGGTGCTA+AGG - chr2_1:11565390-11565409 Msa0194970:intron 50.0%
!! GGATGCAGATTGGTGCTAAG+GGG - chr2_1:11565392-11565411 Msa0194970:intron 50.0%
!! GATGCAGATTGGTGCTAAGG+GGG - chr2_1:11565393-11565412 Msa0194970:intron 50.0%
! TGGTAGGGAGGAGGTGATTT+TGG - chr2_1:11565462-11565481 Msa0194970:three_prime_UTR 50.0%
!! GGAGGAGGTGATTTTGGAGA+TGG - chr2_1:11565468-11565487 Msa0194970:three_prime_UTR 50.0%
AACAACAACGCCTTCTGTCC+CGG + chr2_1:11565499-11565518 None:intergenic 50.0%
! TTGTTGTTGCCAGGTGGAAG+AGG - chr2_1:11565511-11565530 Msa0194970:exon 50.0%
GCTCCGAAGATTGCTGAGAA+TGG - chr2_1:11565574-11565593 Msa0194970:CDS 50.0%
TATGTGTCCGTGTCCTCTGT+AGG - chr2_1:11566048-11566067 Msa0194970:intron 50.0%
ATTAGTCGCCCACCTTTGGT+GGG + chr2_1:11566341-11566360 None:intergenic 50.0%
GACCTTCCAGGTCTTCTTGA+AGG - chr2_1:11566747-11566766 Msa0194970:intron 50.0%
CTCCTTCAAGAAGACCTGGA+AGG + chr2_1:11566752-11566771 None:intergenic 50.0%
TGTGCTCCTTCAAGAAGACC+TGG + chr2_1:11566756-11566775 None:intergenic 50.0%
!!! GCACACCGAGGTTTTGGTTT+AGG - chr2_1:11566771-11566790 Msa0194970:intron 50.0%
!! CACTGAAAGGTGTTCTGCAC+TGG - chr2_1:11566812-11566831 Msa0194970:intron 50.0%
!! GAAAGGTGTTCTGCACTGGT+AGG - chr2_1:11566816-11566835 Msa0194970:intron 50.0%
AGGGTGAGAAAATGGAGGAG+CGG + chr2_1:11567463-11567482 None:intergenic 50.0%
!! CGTTGATGGTTCATCACCAC+AGG - chr2_1:11567532-11567551 Msa0194970:intron 50.0%
! ATGAGCGCTGTCAAAAGGGA+AGG - chr2_1:11567722-11567741 Msa0194970:intron 50.0%
! GTTTGGAGCGTAGTTGGATC+TGG - chr2_1:11568024-11568043 Msa0194970:CDS 50.0%
CCTACCGCCAATTTGTCATC+TGG + chr2_1:11568065-11568084 None:intergenic 50.0%
CCAGATGACAAATTGGCGGT+AGG - chr2_1:11568062-11568081 Msa0194970:intron 50.0%
TCTCGTGAAACGTGGCGTAA+AGG - chr2_1:11568665-11568684 Msa0194970:intron 50.0%
GTGAAACGTGGCGTAAAGGA+AGG - chr2_1:11568669-11568688 Msa0194970:intron 50.0%
! GTTCTTGATGGCATGGTGCA+AGG - chr2_1:11569582-11569601 Msa0194970:CDS 50.0%
!! ATTTGGTGCGGGTGGGTACA+CGG + chr2_1:11564766-11564785 None:intergenic 55.0%
!! GGTTTGGATTTGGTGCGGGT+GGG + chr2_1:11564773-11564792 None:intergenic 55.0%
!! AGGTTTGGATTTGGTGCGGG+TGG + chr2_1:11564774-11564793 None:intergenic 55.0%
CAACACCCACAAGTCCTCAC+CGG - chr2_1:11564811-11564830 Msa0194970:three_prime_UTR 55.0%
CTACACTCGTCTCCCTCTCA+GGG - chr2_1:11564868-11564887 Msa0194970:three_prime_UTR 55.0%
GAAGGAGAAAGGATTGCCGG+CGG - chr2_1:11565141-11565160 Msa0194970:three_prime_UTR 55.0%
TCAAAACACCGCATCACCGC+CGG + chr2_1:11565160-11565179 None:intergenic 55.0%
!!! CGGTGATGCGGTGTTTTGAC+CGG - chr2_1:11565161-11565180 Msa0194970:three_prime_UTR 55.0%
!!! GGTGATGCGGTGTTTTGACC+GGG - chr2_1:11565162-11565181 Msa0194970:three_prime_UTR 55.0%
ATCTTCGCGAAAGCCGGAGA+CGG - chr2_1:11565190-11565209 Msa0194970:intron 55.0%
AGACGGAGGGAACGGAAGTA+TGG - chr2_1:11565207-11565226 Msa0194970:intron 55.0%
! CGGAAGTATGGCATTCAGGC+GGG - chr2_1:11565219-11565238 Msa0194970:intron 55.0%
GTACCGTTTGGAGGTCCATC+CGG - chr2_1:11565250-11565269 Msa0194970:intron 55.0%
!! GGATTCATTTTCGGGCAGGG+AGG - chr2_1:11565350-11565369 Msa0194970:intron 55.0%
GGACAAGGCAGGATGCAGAT+TGG - chr2_1:11565382-11565401 Msa0194970:intron 55.0%
!! TGGTTGTGAAGGTGCCACCA+GGG - chr2_1:11565422-11565441 Msa0194970:intron 55.0%
GGTGATTAGGGAGGCTGGTA+GGG - chr2_1:11565447-11565466 Msa0194970:intron 55.0%
GATGGTGTATCCGGGACAGA+AGG - chr2_1:11565486-11565505 Msa0194970:three_prime_UTR 55.0%
!! CAGAAGGCGTTGTTGTTGCC+AGG - chr2_1:11565502-11565521 Msa0194970:exon 55.0%
!! AAGGCGTTGTTGTTGCCAGG+TGG - chr2_1:11565505-11565524 Msa0194970:exon 55.0%
TTGTTGCCAGGTGGAAGAGG+TGG - chr2_1:11565514-11565533 Msa0194970:CDS 55.0%
TGTTGCCAGGTGGAAGAGGT+GGG - chr2_1:11565515-11565534 Msa0194970:CDS 55.0%
! ACCTTTGGTGGGTCGGAAAC+CGG + chr2_1:11566330-11566349 None:intergenic 55.0%
GTTTCCGACCCACCAAAGGT+GGG - chr2_1:11566330-11566349 Msa0194970:intron 55.0%
! GATTAGTCGCCCACCTTTGG+TGG + chr2_1:11566342-11566361 None:intergenic 55.0%
! CCAGATTAGTCGCCCACCTT+TGG + chr2_1:11566345-11566364 None:intergenic 55.0%
CCAAAGGTGGGCGACTAATC+TGG - chr2_1:11566342-11566361 Msa0194970:intron 55.0%
! CTAATCTGGCTCGTGCGTAG+AGG - chr2_1:11566356-11566375 Msa0194970:intron 55.0%
TAGTGCTGCAAAGCCAGAGG+TGG - chr2_1:11566647-11566666 Msa0194970:intron 55.0%
!! ATGGTAGTGGCAGACCTTCC+AGG - chr2_1:11566735-11566754 Msa0194970:intron 55.0%
! CTTCTTGAAGGAGCACACCG+AGG - chr2_1:11566759-11566778 Msa0194970:intron 55.0%
!! GAAGGAGCACACCGAGGTTT+TGG - chr2_1:11566765-11566784 Msa0194970:intron 55.0%
GTAGCGAGGGTTGCGTGTGT+TGG + chr2_1:11564744-11564763 None:intergenic 60.0%
CGGTTCCGGTGAGGACTTGT+GGG + chr2_1:11564819-11564838 None:intergenic 60.0%
AGGGAGACGAGTGTAGGTGG+TGG + chr2_1:11564864-11564883 None:intergenic 60.0%
GAGAGGGAGACGAGTGTAGG+TGG + chr2_1:11564867-11564886 None:intergenic 60.0%
CCTGAGAGGGAGACGAGTGT+AGG + chr2_1:11564870-11564889 None:intergenic 60.0%
CCTACACTCGTCTCCCTCTC+AGG - chr2_1:11564867-11564886 Msa0194970:three_prime_UTR 60.0%
AAGGATTGCCGGCGGTGATG+CGG - chr2_1:11565149-11565168 Msa0194970:three_prime_UTR 60.0%
AAAGCCGGAGACGGAGGGAA+CGG - chr2_1:11565199-11565218 Msa0194970:intron 60.0%
ACTTCCGTTCCCTCCGTCTC+CGG + chr2_1:11565206-11565225 None:intergenic 60.0%
CCACCGGATGGACCTCCAAA+CGG + chr2_1:11565256-11565275 None:intergenic 60.0%
CGTTTGGAGGTCCATCCGGT+GGG - chr2_1:11565254-11565273 Msa0194970:intron 60.0%
GTTTGGAGGTCCATCCGGTG+GGG - chr2_1:11565255-11565274 Msa0194970:intron 60.0%
GGGAGGGGTTCACATGGACA+AGG - chr2_1:11565367-11565386 Msa0194970:intron 60.0%
GGGGTTCACATGGACAAGGC+AGG - chr2_1:11565371-11565390 Msa0194970:intron 60.0%
!! GCAGATTGGTGCTAAGGGGG+AGG - chr2_1:11565396-11565415 Msa0194970:intron 60.0%
! TGGTGCTAAGGGGGAGGATG+TGG - chr2_1:11565402-11565421 Msa0194970:intron 60.0%
GGGGGAGGATGTGGTTGTGA+AGG - chr2_1:11565411-11565430 Msa0194970:intron 60.0%
!! GTGGTTGTGAAGGTGCCACC+AGG - chr2_1:11565421-11565440 Msa0194970:intron 60.0%
!! TGTGAAGGTGCCACCAGGGA+CGG - chr2_1:11565426-11565445 Msa0194970:intron 60.0%
TGCCACCAGGGACGGTGATT+AGG - chr2_1:11565434-11565453 Msa0194970:intron 60.0%
GCCACCAGGGACGGTGATTA+GGG - chr2_1:11565435-11565454 Msa0194970:intron 60.0%
TCCCTAATCACCGTCCCTGG+TGG + chr2_1:11565439-11565458 None:intergenic 60.0%
ACCAGGGACGGTGATTAGGG+AGG - chr2_1:11565438-11565457 Msa0194970:intron 60.0%
CGGTGATTAGGGAGGCTGGT+AGG - chr2_1:11565446-11565465 Msa0194970:intron 60.0%
GATTAGGGAGGCTGGTAGGG+AGG - chr2_1:11565450-11565469 Msa0194970:intron 60.0%
CAGGTGGAAGAGGTGGGAGA+GGG - chr2_1:11565521-11565540 Msa0194970:CDS 60.0%
! ACCGGTTTCCGACCCACCAA+AGG - chr2_1:11566326-11566345 Msa0194970:intron 60.0%
GGTTTCCGACCCACCAAAGG+TGG - chr2_1:11566329-11566348 Msa0194970:intron 60.0%
! GTGCGTAGAGGCATGCACAC+TGG - chr2_1:11566368-11566387 Msa0194970:intron 60.0%
GGGTGGGTACACGGTAGCGA+GGG + chr2_1:11564757-11564776 None:intergenic 65.0%
GCGGTTCCGGTGAGGACTTG+TGG + chr2_1:11564820-11564839 None:intergenic 65.0%
! AGTGTAGGTGGTGGCGTCGC+CGG + chr2_1:11564855-11564874 None:intergenic 65.0%
TTCGCGAAAGCCGGAGACGG+AGG - chr2_1:11565193-11565212 Msa0194970:intron 65.0%
TCGCGAAAGCCGGAGACGGA+GGG - chr2_1:11565194-11565213 Msa0194970:intron 65.0%
CCGTTTGGAGGTCCATCCGG+TGG - chr2_1:11565253-11565272 Msa0194970:intron 65.0%
GTCCATCCGGTGGGGATGGA+GGG - chr2_1:11565263-11565282 Msa0194970:intron 65.0%
ACCTCTCCCTCCATCCCCAC+CGG + chr2_1:11565272-11565291 None:intergenic 65.0%
GCCTCCCTAATCACCGTCCC+TGG + chr2_1:11565442-11565461 None:intergenic 65.0%
GGGACGGTGATTAGGGAGGC+TGG - chr2_1:11565442-11565461 Msa0194970:intron 65.0%
TAGGGAGGCTGGTAGGGAGG+AGG - chr2_1:11565453-11565472 Msa0194970:intron 65.0%
CCTCTCCCACCTCTTCCACC+TGG + chr2_1:11565523-11565542 None:intergenic 65.0%
CCAGGTGGAAGAGGTGGGAG+AGG - chr2_1:11565520-11565539 Msa0194970:CDS 65.0%
! GTCGCCCACCTTTGGTGGGT+CGG + chr2_1:11566337-11566356 None:intergenic 65.0%
CGGGTGGGTACACGGTAGCG+AGG + chr2_1:11564758-11564777 None:intergenic 70.0%
GAGGAGTGGCGGTTCCGGTG+AGG + chr2_1:11564828-11564847 None:intergenic 70.0%
GCGGAGAGGAGTGGCGGTTC+CGG + chr2_1:11564833-11564852 None:intergenic 70.0%
GAACCGCCACTCCTCTCCGC+CGG - chr2_1:11564833-11564852 Msa0194970:three_prime_UTR 70.0%
GGAGGTCCATCCGGTGGGGA+TGG - chr2_1:11565259-11565278 Msa0194970:intron 70.0%
GGTCCATCCGGTGGGGATGG+AGG - chr2_1:11565262-11565281 Msa0194970:intron 70.0%
CTCCCTCCATCCCCACCGGA+TGG + chr2_1:11565268-11565287 None:intergenic 70.0%
TCCGGTGGGGATGGAGGGAG+AGG - chr2_1:11565268-11565287 Msa0194970:intron 70.0%
GGTGGGGATGGAGGGAGAGG+TGG - chr2_1:11565271-11565290 Msa0194970:intron 70.0%
CGGGCAGGGAGGGGTTCACA+TGG - chr2_1:11565361-11565380 Msa0194970:intron 70.0%
TCGCCGGCGGAGAGGAGTGG+CGG + chr2_1:11564839-11564858 None:intergenic 75.0%
! GTAGGTGGTGGCGTCGCCGG+CGG + chr2_1:11564852-11564871 None:intergenic 75.0%
! GCGTCGCCGGCGGAGAGGAG+TGG + chr2_1:11564842-11564861 None:intergenic 80.0%
!! TGGTGGCGTCGCCGGCGGAG+AGG + chr2_1:11564847-11564866 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 11564692 11569969 11564692 ID=Msa0194970;Name=Msa0194970
chr2_1 mRNA 11564692 11569969 11564692 ID=Msa0194970-mRNA-1;Parent=Msa0194970;Name=Msa0194970-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.37|0.22|1|0.12|0|9|552|487
chr2_1 exon 11564692 11565190 11564692 ID=Msa0194970-mRNA-1:exon:5101;Parent=Msa0194970-mRNA-1
chr2_1 exon 11565459 11565604 11565459 ID=Msa0194970-mRNA-1:exon:5100;Parent=Msa0194970-mRNA-1
chr2_1 exon 11565948 11566040 11565948 ID=Msa0194970-mRNA-1:exon:5099;Parent=Msa0194970-mRNA-1
chr2_1 exon 11566907 11567137 11566907 ID=Msa0194970-mRNA-1:exon:5098;Parent=Msa0194970-mRNA-1
chr2_1 exon 11567828 11568069 11567828 ID=Msa0194970-mRNA-1:exon:5097;Parent=Msa0194970-mRNA-1
chr2_1 exon 11569057 11569293 11569057 ID=Msa0194970-mRNA-1:exon:5096;Parent=Msa0194970-mRNA-1
chr2_1 exon 11569372 11569620 11569372 ID=Msa0194970-mRNA-1:exon:5095;Parent=Msa0194970-mRNA-1
chr2_1 exon 11569633 11569767 11569633 ID=Msa0194970-mRNA-1:exon:5094;Parent=Msa0194970-mRNA-1
chr2_1 exon 11569786 11569969 11569786 ID=Msa0194970-mRNA-1:exon:5093;Parent=Msa0194970-mRNA-1
chr2_1 CDS 11569786 11569969 11569786 ID=Msa0194970-mRNA-1:cds;Parent=Msa0194970-mRNA-1
chr2_1 CDS 11569633 11569767 11569633 ID=Msa0194970-mRNA-1:cds;Parent=Msa0194970-mRNA-1
chr2_1 CDS 11569372 11569620 11569372 ID=Msa0194970-mRNA-1:cds;Parent=Msa0194970-mRNA-1
chr2_1 CDS 11569057 11569293 11569057 ID=Msa0194970-mRNA-1:cds;Parent=Msa0194970-mRNA-1
chr2_1 CDS 11567828 11568069 11567828 ID=Msa0194970-mRNA-1:cds;Parent=Msa0194970-mRNA-1
chr2_1 CDS 11566907 11567137 11566907 ID=Msa0194970-mRNA-1:cds;Parent=Msa0194970-mRNA-1
chr2_1 CDS 11565948 11566040 11565948 ID=Msa0194970-mRNA-1:cds;Parent=Msa0194970-mRNA-1
chr2_1 CDS 11565512 11565604 11565512 ID=Msa0194970-mRNA-1:cds;Parent=Msa0194970-mRNA-1
chr2_1 three_prime_UTR 11565459 11565511 11565459 ID=Msa0194970-mRNA-1:three_prime_utr;Parent=Msa0194970-mRNA-1
chr2_1 three_prime_UTR 11564692 11565190 11564692 ID=Msa0194970-mRNA-1:three_prime_utr;Parent=Msa0194970-mRNA-1
Gene Sequence

>Msa0194970

ATGGTAACTTCAATCTCACCATGGTTCTCTCCCATTTCTATATCTTGTTCCAACACACGCAACCCTCGCTACCGTGTACCCACCCGCACCAAATCCAAACCTCCTCCAAATCCTAAACTCAACACCCACAAGTCCTCACCGGAACCGCCACTCCTCTCCGCCGGCGACGCCACCACCTACACTCACTTCTCTTCCACTTTCTCACCTTCCTCCTCTGAAATCAAACTCTCCGAATCAACACCAATTCACCAATTGCTCCACAAACTCGATAACGATGATGATGAAGAAGTAGAAGAAGAAGAAGAAGAAGAAATCAATGGAATTGGTGAGTCTGAAGATGATGAAGAATTGGGGTTTATGGATGAGGAGATTGAAGAAGGTGAAGAATTCTGGAGTGAGGAAACTGAAGAAGAAGAAGTGAAGGAGAAAGGATTGCCGGCGGTGATGCGGTGTTTTGACCGGGCGAAAATCTTCGCGAAAGCCGGAGACGGAGGGAACGGAAGTATGGCATTCAGGCGGGAGAAATACGTACCGTTTGGAGGTCCATCCGGTGGGGATGGAGGGAGAGGGAGGGGTTCACATGGACAAGGCAGGATGCAGATTGGTGCTAAGGGGGAGGATGTGGTTGTGAAGGTGCCACCAGGGACGGTGATTAGGGAGGCTGGTAGGGAGGAGGTGATTTTGGAGATGGTGTATCCGGGACAGAAGGCGTTGTTGTTGCCAGGTGGAAGAGGTGGGAGAGGGAATGCTGCTTTTAAGAGTGGGAGTAATAAAGCTCCGAAGATTGCTGAGAATGGTGAACAAGATGTTGGTATAGTTGGTGCTCCAAATGCAGGGAAGAGTACACTTTTGAGTGTTATTAGTGCTGCAAAGCCAGAGGTGGCAAATTATCCCTTTACAACTTTGCTTCCCAATCTGGGCGTTGTTTCCTTTGACTACGATTCAACTATGGTAGTGGCAGACCTTCCAGGTCTTCTTGAAGGAGCACACCGAGGTTTTGGTTTAGGTCATGAATTTCTGCGACACACTGAAAGGTGTTCTGCACTGATACATGTCGTTGATGGTTCATCACCACAGGCAGATCTTGAGTTTGATGCAGTTCGTCTAGAACTGAAGCTATTTAATCCTGAACTTGCTGAGAAGCCATTTATAGTTGCTTATAACAAAATGGATCTTCCAGAAGCATACGAAAACTGGGAATCCTTCAAGGAAAAGTTGCAATCTCATGGGATCACGCCTTTTTGTATGAGCGCTGTCAAAAGGGAAGGTACTCATGAAAAAAGATTCCAAAATGTCCTTGAGGCTTGTGGTGTATTTAAGTCTCTCGTGAAACGTGGCGTAAAGGAAGGCGACAAAGTGATTGTTGGAGAGATGGAGATGATATGGCATGACTCCTCAAACAAATCTGGTGCATCAAAGATGAAGATGTCCACAGAGTCAATTAAATGGCCTGAATGGAAGTAA
Protein sequence

>Msa0194970

MVTSISPWFSPISISCSNTRNPRYRVPTRTKSKPPPNPKLNTHKSSPEPPLLSAGDATTYTHFSSTFSPSSSEIKLSESTPIHQLLHKLDNDDDEEVEEEEEEEINGIGESEDDEELGFMDEEIEEGEEFWSEETEEEEVKEKGLPAVMRCFDRAKIFAKAGDGGNGSMAFRREKYVPFGGPSGGDGGRGRGSHGQGRMQIGAKGEDVVVKVPPGTVIREAGREEVILEMVYPGQKALLLPGGRGGRGNAAFKSGSNKAPKIAENGEQDVGIVGAPNAGKSTLLSVISAAKPEVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALIHVVDGSSPQADLEFDAVRLELKLFNPELAEKPFIVAYNKMDLPEAYENWESFKEKLQSHGITPFCMSAVKREGTHEKRFQNVLEACGVFKSLVKRGVKEGDKVIVGEMEMIWHDSSNKSGASKMKMSTESIKWPEWK*