AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0794720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0794720 MtrunA17_Chr5g0396311 98.367 551 9 0 1 551 1 551 0.0 1122
Msa0794720 MtrunA17_Chr5g0396331 81.136 546 101 1 1 546 1 544 0.0 938
Msa0794720 MtrunA17_Chr8g0370701 64.154 544 193 2 1 542 43 586 0.0 772
Msa0794720 MtrunA17_Chr8g0370731 64.509 479 168 1 67 543 20 498 0.0 667
Msa0794720 MtrunA17_Chr4g0068151 52.087 551 251 4 9 546 15 565 0.0 595
Msa0794720 MtrunA17_Chr2g0301671 51.906 551 252 4 9 546 15 565 0.0 594
Msa0794720 MtrunA17_Chr3g0109731 50.452 553 260 3 1 539 1 553 0.0 585
Msa0794720 MtrunA17_Chr5g0433241 53.370 549 240 7 8 544 8 552 0.0 584
Msa0794720 MtrunA17_Chr5g0433231 50.903 554 255 8 1 541 1 550 0.0 535
Msa0794720 MtrunA17_Chr5g0433221 50.540 556 258 8 1 543 1 552 0.0 530
Msa0794720 MtrunA17_Chr5g0406681 49.360 547 264 9 2 540 28 569 0.0 528
Msa0794720 MtrunA17_Chr6g0471311 50.179 560 256 8 1 543 1 554 2.04e-179 517
Msa0794720 MtrunA17_Chr2g0327341 29.135 532 319 16 29 538 42 537 4.18e-47 172
Msa0794720 MtrunA17_Chr8g0353341 29.012 486 292 15 40 500 65 522 9.58e-45 166
Msa0794720 MtrunA17_Chr4g0028411 28.440 545 339 14 14 538 27 540 6.28e-43 160
Msa0794720 MtrunA17_Chr1g0157401 26.453 499 335 12 40 526 68 546 1.54e-41 157
Msa0794720 MtrunA17_Chr6g0471921 29.134 508 315 19 41 534 33 509 2.18e-40 153
Msa0794720 MtrunA17_Chr5g0395431 27.878 556 339 17 9 538 66 585 7.99e-40 152
Msa0794720 MtrunA17_Chr3g0102411 26.079 533 349 16 19 535 33 536 1.15e-38 149
Msa0794720 MtrunA17_Chr4g0000461 28.767 511 329 14 40 538 53 540 2.94e-38 147
Msa0794720 MtrunA17_Chr3g0116251 28.571 406 261 11 152 541 165 557 1.85e-37 145
Msa0794720 MtrunA17_Chr3g0116271 28.610 374 242 8 180 541 199 559 1.18e-36 143
Msa0794720 MtrunA17_Chr1g0197391 26.565 527 332 15 36 542 79 570 8.26e-36 141
Msa0794720 MtrunA17_Chr4g0072561 26.834 518 334 16 27 526 44 534 1.41e-34 137
Msa0794720 MtrunA17_Chr1g0186071 27.976 504 318 12 41 535 84 551 1.20e-33 134
Msa0794720 MtrunA17_Chr4g0039791 27.600 500 317 14 52 534 84 555 2.99e-33 133
Msa0794720 MtrunA17_Chr5g0409791 28.628 503 318 14 52 534 81 562 3.83e-33 133
Msa0794720 MtrunA17_Chr1g0180541 26.629 537 330 15 39 551 55 551 7.74e-33 132
Msa0794720 MtrunA17_Chr5g0409771 29.518 498 306 17 52 533 80 548 2.40e-32 130
Msa0794720 MtrunA17_Chr1g0180551 27.112 509 321 15 41 526 126 607 4.14e-32 130
Msa0794720 MtrunA17_Chr2g0292471 25.185 540 346 17 47 542 35 560 3.02e-28 119
Msa0794720 MtrunA17_Chr2g0334131 32.130 277 174 8 267 538 15 282 2.20e-27 112
Msa0794720 MtrunA17_Chr1g0194371 22.904 489 302 13 41 470 78 550 2.14e-18 89.0
Msa0794720 MtrunA17_Chr4g0034181 22.835 508 291 23 39 474 74 552 3.01e-17 85.1
Msa0794720 MtrunA17_Chr4g0004101 33.974 156 94 4 388 534 170 325 4.52e-17 82.8
Msa0794720 MtrunA17_Chr7g0252691 25.139 541 344 20 37 536 203 723 4.74e-17 84.7
Msa0794720 MtrunA17_Chr7g0270221 25.661 378 213 12 147 470 147 510 9.28e-17 83.6
Msa0794720 MtrunA17_Chr4g0004841 35.000 160 91 5 388 534 175 334 4.83e-15 76.6
Msa0794720 MtrunA17_Chr3g0124631 26.989 352 173 15 182 463 248 585 1.70e-12 70.1
Msa0794720 MtrunA17_Chr1g0157431 24.286 280 196 6 40 311 68 339 8.09e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0794720 AT1G20560.1 68.488 549 169 1 1 545 3 551 0.0 806
Msa0794720 AT2G17650.1 60.971 556 203 2 1 542 48 603 0.0 719
Msa0794720 AT1G20560.2 68.710 473 144 1 77 545 1 473 0.0 694
Msa0794720 AT3G16910.1 51.268 552 255 4 9 546 17 568 0.0 601
Msa0794720 AT1G76290.1 53.407 543 245 4 1 540 1 538 0.0 597
Msa0794720 AT5G16370.1 51.543 551 252 7 1 541 1 546 0.0 570
Msa0794720 AT5G16340.1 50.909 550 255 6 1 540 1 545 0.0 560
Msa0794720 AT1G75960.1 51.184 549 253 6 1 539 1 544 0.0 550
Msa0794720 AT1G66120.1 49.453 548 268 4 1 539 1 548 0.0 548
Msa0794720 AT1G65880.1 48.381 556 270 4 1 539 1 556 0.0 541
Msa0794720 AT1G65890.1 48.468 555 270 4 1 539 1 555 0.0 536
Msa0794720 AT1G77240.1 48.723 548 268 7 1 539 1 544 0.0 535
Msa0794720 AT1G21530.2 47.645 552 272 8 1 539 1 548 0.0 525
Msa0794720 AT1G21530.1 47.645 552 270 9 1 539 1 546 1.54e-180 520
Msa0794720 AT1G21540.1 48.282 553 268 8 1 539 1 549 1.74e-180 520
Msa0794720 AT1G68270.1 44.144 555 264 8 1 539 1 525 3.22e-155 455
Msa0794720 AT4G05160.1 29.487 546 328 15 17 538 30 542 7.86e-50 180
Msa0794720 AT1G20510.1 26.838 544 350 16 7 526 11 530 1.64e-43 163
Msa0794720 AT1G20500.1 27.686 484 311 12 58 529 83 539 3.24e-43 162
Msa0794720 AT5G63380.1 31.436 369 226 11 179 536 202 554 8.86e-41 155
Msa0794720 AT3G21240.1 28.265 513 326 15 39 535 63 549 1.87e-40 154
Msa0794720 AT1G65060.1 26.874 547 346 15 10 535 46 559 6.94e-40 153
Msa0794720 AT1G20480.1 27.812 489 317 13 51 526 86 551 9.66e-40 152
Msa0794720 AT3G48990.1 27.841 528 333 13 19 534 17 508 2.56e-37 145
Msa0794720 AT3G21230.1 28.681 523 327 16 38 541 74 569 5.20e-35 139
Msa0794720 AT4G19010.1 29.810 369 226 10 182 534 205 556 1.27e-33 135
Msa0794720 AT1G20510.2 26.337 486 311 15 7 469 11 472 2.20e-33 133
Msa0794720 AT5G38120.1 27.216 485 315 13 56 529 82 539 3.77e-33 133
Msa0794720 AT3G21230.3 28.629 496 306 16 38 512 74 542 9.77e-31 126
Msa0794720 AT1G62940.1 26.938 516 321 19 41 535 55 535 9.98e-30 123
Msa0794720 AT3G21240.2 27.578 446 282 14 40 470 64 483 4.48e-29 120
Msa0794720 AT3G21240.3 27.578 446 282 14 40 470 64 483 4.48e-29 120
Msa0794720 AT5G38120.3 26.739 460 300 12 56 505 82 514 4.72e-29 121
Msa0794720 AT1G51680.1 26.628 522 328 15 39 535 65 556 1.33e-28 120
Msa0794720 AT1G20510.3 25.983 458 292 15 7 441 11 444 6.94e-27 114
Msa0794720 AT1G51680.3 26.680 491 306 14 39 505 65 525 3.88e-26 112
Msa0794720 AT1G30520.2 23.757 543 368 13 20 529 13 542 9.46e-25 108
Msa0794720 AT1G30520.1 23.757 543 368 13 20 529 13 542 9.46e-25 108
Msa0794720 AT3G21230.2 28.381 451 278 15 38 470 74 497 8.24e-24 105
Msa0794720 AT1G65060.2 25.442 452 284 14 10 441 46 464 8.55e-23 102
Msa0794720 AT3G16170.1 25.700 393 227 12 182 534 235 602 1.52e-22 102
Msa0794720 AT5G38120.4 26.179 424 276 12 56 469 82 478 6.14e-22 99.4
Msa0794720 AT5G38120.2 26.179 424 276 12 56 469 82 478 6.14e-22 99.4
Msa0794720 AT2G47240.1 23.673 490 296 16 41 470 78 549 5.00e-21 97.4
Msa0794720 AT2G47240.2 23.673 490 296 16 41 470 78 549 5.00e-21 97.4
Msa0794720 AT2G47240.3 23.673 490 296 16 41 470 78 549 5.00e-21 97.4
Msa0794720 AT2G47240.4 23.673 490 296 16 41 470 19 490 5.99e-21 97.1
Msa0794720 AT1G51680.2 26.316 456 282 14 39 470 65 490 1.31e-19 92.4
Msa0794720 AT1G20490.2 25.806 372 240 11 58 418 83 429 1.17e-18 89.4
Msa0794720 AT1G20490.1 25.806 372 240 11 58 418 83 429 1.17e-18 89.4
Msa0794720 AT5G36880.6 23.497 549 343 20 37 536 145 665 1.78e-17 86.7
Msa0794720 AT5G36880.3 23.497 549 343 20 37 536 145 665 1.78e-17 86.7
Msa0794720 AT5G36880.5 23.497 549 343 20 37 536 145 665 1.78e-17 86.7
Msa0794720 AT5G36880.1 23.497 549 343 20 37 536 145 665 1.78e-17 86.7
Msa0794720 AT1G49430.1 23.952 501 295 19 40 474 77 557 1.80e-17 86.3
Msa0794720 AT5G36880.2 23.818 550 340 21 37 536 195 715 2.59e-17 85.9
Msa0794720 AT1G64400.1 25.971 489 277 19 41 466 81 547 6.79e-17 84.7
Msa0794720 AT1G30520.3 22.128 470 320 11 20 465 13 460 1.71e-14 76.6
Msa0794720 AT1G30520.4 22.128 470 320 11 20 465 13 460 1.71e-14 76.6
Msa0794720 AT4G11030.1 23.108 502 275 21 41 466 81 547 8.31e-13 71.6

Find 148 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATGACATCCACGCAATA+TGG 0.213485 5_3:-6649805 Msa0794720:five_prime_UTR
TCGAAGGATATTATCATATC+TGG 0.228485 5_3:-6647963 Msa0794720:CDS
TCTCACTCCAATCAGCTTCT+TGG 0.231430 5_3:-6649621 Msa0794720:CDS
TCATACATTGCTGGAATATT+AGG 0.253425 5_3:+6649058 None:intergenic
ATTGGATCCCATTCATCTTT+TGG 0.275746 5_3:+6648743 None:intergenic
CTTTAGCAGTTACATTTCTT+TGG 0.277220 5_3:+6648516 None:intergenic
GAAGTGTAATTCAAAGAAAT+TGG 0.280408 5_3:+6648725 None:intergenic
AATTTACTCGTTAAATTCAT+TGG 0.288054 5_3:+6647466 None:intergenic
AACTACCAATCTTCCACTTT+TGG 0.288627 5_3:-6648867 Msa0794720:CDS
AGTCTATGCCGGTGTATTTA+TGG 0.290959 5_3:-6648613 Msa0794720:CDS
CCATGGGTGAGGTGATGTTT+AGG 0.293811 5_3:-6648115 Msa0794720:CDS
CATTTAAAGGTGGATGGTTT+AGG 0.293868 5_3:-6648040 Msa0794720:CDS
GCAACACAAGAGTCATTTAA+AGG 0.314268 5_3:-6648053 Msa0794720:CDS
AGGTGCTTATCTTAATTCTT+TGG 0.316766 5_3:-6648660 Msa0794720:CDS
CGAGACAGGCTACTCCATTC+TGG 0.326334 5_3:+6648248 None:intergenic
TATGGTTTGACAGAAACTTA+TGG 0.346969 5_3:-6648296 Msa0794720:CDS
TGGGAGACCTGATGAGTATT+GGG 0.357069 5_3:-6647865 Msa0794720:CDS
TACTCGTCATGATTCGTTGA+TGG 0.363124 5_3:-6648987 Msa0794720:CDS
TTTGATTTAGTTCATTCATA+TGG 0.364655 5_3:-6648314 Msa0794720:CDS
GTAATTCATGATCTACAAAA+AGG 0.367573 5_3:+6648930 None:intergenic
GATATCAGAAAGCCACTTCC+GGG 0.373117 5_3:-6648407 Msa0794720:CDS
GCAATGTATGAGCTGCATTT+TGG 0.374424 5_3:-6649046 Msa0794720:CDS
TGATATCAGAAAGCCACTTC+CGG 0.382311 5_3:-6648408 Msa0794720:CDS
AATTAAGATAAGCACCTCTA+TGG 0.382407 5_3:+6648666 None:intergenic
CATGGGTGAGGTGATGTTTA+GGG 0.382589 5_3:-6648114 Msa0794720:CDS
GTCTTGCCGGTTGATGTCTT+TGG 0.393924 5_3:+6647714 None:intergenic
TGGCTATATACTACACCTTT+AGG 0.394178 5_3:+6648686 None:intergenic
CAAAGAAATGTAACTGCTAA+AGG 0.396156 5_3:-6648515 Msa0794720:CDS
AAATACACGATCATATGATA+TGG 0.397569 5_3:-6649779 Msa0794720:five_prime_UTR
ATTTCTTTGAATTACACTTC+AGG 0.409528 5_3:-6648722 Msa0794720:CDS
TGACGGTTACATAGAACTTA+AGG 0.410660 5_3:-6647991 Msa0794720:CDS
ATGGTTTAGGACTGGTGACT+TGG 0.411295 5_3:-6648027 Msa0794720:CDS
TCCAAAATTAAGACCAAAAG+TGG 0.416587 5_3:+6648854 None:intergenic
TGCTTGAAGAAAGCTTCAAT+TGG 0.426710 5_3:-6647514 Msa0794720:three_prime_UTR
CAAAAGATCAAACAGTTAGA+AGG 0.427260 5_3:-6649687 Msa0794720:five_prime_UTR
GGAAGTGGCTTTCTGATATC+AGG 0.427800 5_3:+6648410 None:intergenic
ATTCTCATAGATCAATGTTC+CGG 0.429813 5_3:+6648805 None:intergenic
GTTGTTGAGGCAGCTGTTGT+TGG 0.430997 5_3:-6647885 Msa0794720:CDS
TGAAAAGACCAAAAGATGAA+TGG 0.437562 5_3:-6648751 Msa0794720:CDS
CGAATCATGACGAGTATTCA+AGG 0.441411 5_3:+6648994 None:intergenic
TTCTCATAGATCAATGTTCC+GGG 0.441818 5_3:+6648806 None:intergenic
AAATGCAGCTCATACATTGC+TGG 0.444160 5_3:+6649049 None:intergenic
TCGCCTGCTCCTCTCGAGAC+AGG 0.444470 5_3:+6648234 None:intergenic
CTCAAAATCAAGTTTCCCTT+CGG 0.445425 5_3:+6648775 None:intergenic
GAAGGAGAAGGCAAAGGCTA+TGG 0.446378 5_3:-6647676 Msa0794720:CDS
GAAAAGACCAAAAGATGAAT+GGG 0.450929 5_3:-6648750 Msa0794720:CDS
GAGCGCTCCAAGAAGCTGAT+TGG 0.451334 5_3:+6649614 None:intergenic
TAGCCTGTCTCGAGAGGAGC+AGG 0.452101 5_3:-6648237 Msa0794720:CDS
CCATGTTTCATTGCAATGGA+TGG 0.452299 5_3:-6648583 Msa0794720:CDS
GTCTCTCCCCAATACTCATC+AGG 0.454603 5_3:+6647858 None:intergenic
TAAGACCAAAAGTGGAAGAT+TGG 0.454652 5_3:+6648862 None:intergenic
CGAAGGATATTATCATATCT+GGG 0.456932 5_3:-6647962 Msa0794720:CDS
AAAGAAATGTAACTGCTAAA+GGG 0.463695 5_3:-6648514 Msa0794720:CDS
ATTTGTGTAGGTTGCTGTGT+TGG 0.466354 5_3:-6649083 Msa0794720:intron
TTGTTGAGGCAGCTGTTGTT+GGG 0.470119 5_3:-6647884 Msa0794720:CDS
ACAGCTGCCTCAACAACTGC+TGG 0.470476 5_3:+6647891 None:intergenic
CGTCAAGGAGTACAACATAT+TGG 0.470912 5_3:-6648200 Msa0794720:CDS
GTTCCCATGTTTCATTGCAA+TGG 0.474688 5_3:-6648587 Msa0794720:CDS
ATTAATGAGTTCAGAACTGT+TGG 0.476604 5_3:+6648443 None:intergenic
AGAAACACCGAGTTGAGAAA+TGG 0.477163 5_3:+6649496 None:intergenic
GATCTGCCAAAGACATCAAC+CGG 0.477410 5_3:-6647720 Msa0794720:CDS
TTGACAGAAACTTATGGTCC+TGG 0.482770 5_3:-6648290 Msa0794720:CDS
AAAGGTGGATGGTTTAGGAC+TGG 0.483012 5_3:-6648035 Msa0794720:CDS
CGGTGTTTCTCCTCATGATG+TGG 0.485617 5_3:-6649483 Msa0794720:intron
TTGGGAGACCTGATGAGTAT+TGG 0.488351 5_3:-6647866 Msa0794720:CDS
TTCCATGTGCAAATTGATCC+AGG 0.491293 5_3:+6648272 None:intergenic
ACATGACATCCACGCAATAT+GGG 0.492433 5_3:-6649804 Msa0794720:five_prime_UTR
CCATCCATTGCAATGAAACA+TGG 0.496766 5_3:+6648583 None:intergenic
GAACGTAGTTAGCGTTGCAT+TGG 0.497591 5_3:+6649645 None:intergenic
TGAATTACTTGATATTGCTA+AGG 0.502727 5_3:-6648915 Msa0794720:CDS
ACTACTACCTTCCCCGGAAG+TGG 0.505110 5_3:+6648395 None:intergenic
TGGTTTAGGACTGGTGACTT+GGG 0.510160 5_3:-6648026 Msa0794720:CDS
AAACATTAGCACCATTGAGT+TGG 0.513653 5_3:-6647934 Msa0794720:CDS
GACTTTGTTATTGTAAACAA+TGG 0.513822 5_3:+6649589 None:intergenic
GCAATGGATGGTGTCTCCCT+TGG 0.517996 5_3:-6648571 Msa0794720:CDS
TGTGATGAATGGATATCTAA+AGG 0.519167 5_3:-6648084 Msa0794720:CDS
AGGCGGTGCTCCACCGCCAC+CGG 0.520554 5_3:-6648366 Msa0794720:CDS
GCTTCTTCCATTTCTCAACT+CGG 0.522221 5_3:-6649503 Msa0794720:CDS
AATAACACCTTCCAACTCAA+TGG 0.523579 5_3:+6647923 None:intergenic
GGAACAACATCAAGTCCTAA+AGG 0.525359 5_3:-6648701 Msa0794720:CDS
TTTGCACATGGAAACCAGAA+TGG 0.525741 5_3:-6648262 Msa0794720:CDS
AGGGGAAACACTGTGATGAA+TGG 0.526822 5_3:-6648095 Msa0794720:CDS
CATAGAACAGCCCCTGACAT+TGG 0.528095 5_3:+6649019 None:intergenic
CTTTAGAAATGTATTACAGT+CGG 0.538466 5_3:+6647625 None:intergenic
GGTGACATCGTTGTAGATGA+TGG 0.538839 5_3:+6649565 None:intergenic
GCTCATCCATCAGTCTCTCC+CGG 0.539601 5_3:-6648824 Msa0794720:CDS
CAGAAAGCCACTTCCGGGGA+AGG 0.540398 5_3:-6648402 Msa0794720:CDS
GTCATCACTACTACCTTCCC+CGG 0.545022 5_3:+6648389 None:intergenic
AAGAGTCATTTAAAGGTGGA+TGG 0.546163 5_3:-6648046 Msa0794720:CDS
GAATTACTTGATATTGCTAA+GGG 0.549278 5_3:-6648914 Msa0794720:CDS
AATGTTCCGGGAGAGACTGA+TGG 0.553323 5_3:+6648818 None:intergenic
TATGAGAATCTTATATCCGA+AGG 0.561953 5_3:-6648791 Msa0794720:CDS
GGTACACTCTTCATTGTGAC+AGG 0.562785 5_3:+6648152 None:intergenic
TTGTGCGTTTGTGAAGTTGA+AGG 0.563096 5_3:-6647832 Msa0794720:CDS
AAGGAGAAGGCAAAGGCTAT+GGG 0.567730 5_3:-6647675 Msa0794720:CDS
CCTTGGAGTATTGCTGCTCA+AGG 0.568786 5_3:-6648554 Msa0794720:CDS
AGTTAGAAGGTGACGATGGA+AGG 0.571786 5_3:-6649674 Msa0794720:exon
CAATGAGATGAAGTCTATGC+CGG 0.575034 5_3:-6648624 Msa0794720:CDS
CCTAAACATCACCTCACCCA+TGG 0.581531 5_3:+6648115 None:intergenic
GAAGGGAGGGCACAATGCTA+CGG 0.582366 5_3:-6647814 Msa0794720:CDS
TTTGTTATTGTAAACAATGG+CGG 0.586498 5_3:+6649592 None:intergenic
GGGAAGGTAGTAGTGATGAC+AGG 0.592219 5_3:-6648386 Msa0794720:CDS
AGGAGTACAACATATTGGAC+TGG 0.595988 5_3:-6648195 Msa0794720:CDS
TGTGCGTTTGTGAAGTTGAA+GGG 0.597382 5_3:-6647831 Msa0794720:CDS
AAGAAGCTGATTGGAGTGAG+AGG 0.599442 5_3:+6649623 None:intergenic
GTACAACATATTGGACTGGA+AGG 0.601901 5_3:-6648191 Msa0794720:CDS
TAGTCATCCAGCAGTTGTTG+AGG 0.610515 5_3:-6647898 Msa0794720:CDS
AAGCACAAAGTAACACACAC+GGG 0.611637 5_3:-6648473 Msa0794720:CDS
ATTAGCACCATTGAGTTGGA+AGG 0.615739 5_3:-6647930 Msa0794720:CDS
CATCCATTGCAATGAAACAT+GGG 0.616932 5_3:+6648584 None:intergenic
AAGGAACAAACCACATCATG+AGG 0.618013 5_3:+6649473 None:intergenic
ATGGAGTAGCCTGTCTCGAG+AGG 0.618262 5_3:-6648243 Msa0794720:CDS
CCTTGAGCAGCAATACTCCA+AGG 0.618919 5_3:+6648554 None:intergenic
CATATTGCGTGGATGTCATG+TGG 0.624433 5_3:+6649806 None:intergenic
TTCAACTTCACAAACGCACA+AGG 0.624923 5_3:+6647834 None:intergenic
TGGAGTATTGCTGCTCAAGG+TGG 0.625763 5_3:-6648551 Msa0794720:CDS
GAAGGATATTATCATATCTG+GGG 0.626950 5_3:-6647961 Msa0794720:CDS
ATGAGAATCTTATATCCGAA+GGG 0.627897 5_3:-6648790 Msa0794720:CDS
ATGGGTGAGGTGATGTTTAG+GGG 0.630548 5_3:-6648113 Msa0794720:CDS
TGTCACAATGAAGAGTGTAC+CGG 0.633282 5_3:-6648150 Msa0794720:CDS
AGAACTTAAGGATCGGTCGA+AGG 0.636389 5_3:-6647979 Msa0794720:CDS
CGTTTGTGAAGTTGAAGGGA+GGG 0.637801 5_3:-6647827 Msa0794720:CDS
TTGGGAGTAAAGCATTCTGA+CGG 0.644221 5_3:-6648008 Msa0794720:CDS
CCGGCTGATGCGAAAACCAT+GGG 0.646339 5_3:-6648131 Msa0794720:CDS
CATGACATCCACGCAATATG+GGG 0.651219 5_3:-6649803 Msa0794720:five_prime_UTR
ACACAAGAGTCATTTAAAGG+TGG 0.651781 5_3:-6648050 Msa0794720:CDS
GGAACACACCATAAATACAC+CGG 0.652672 5_3:+6648605 None:intergenic
GTCCTGGATCAATTTGCACA+TGG 0.656520 5_3:-6648274 Msa0794720:CDS
TAAGCACAAAGTAACACACA+CGG 0.660502 5_3:-6648474 Msa0794720:CDS
CTTGAGCAGCAATACTCCAA+GGG 0.661249 5_3:+6648555 None:intergenic
AGTGGCTTTCTGATATCAGG+TGG 0.661622 5_3:+6648413 None:intergenic
GGTGTAGTATATAGCCATAG+AGG 0.662140 5_3:-6648680 Msa0794720:CDS
TGATGCGAAAACCATGGGTG+AGG 0.664777 5_3:-6648126 Msa0794720:CDS
TGTATTTGCCCCATATTGCG+TGG 0.666029 5_3:+6649795 None:intergenic
AAACAGTTAGAAGGTGACGA+TGG 0.667491 5_3:-6649678 Msa0794720:exon
GTTACATAGAACTTAAGGAT+CGG 0.668885 5_3:-6647986 Msa0794720:CDS
AAGGATATTATCATATCTGG+GGG 0.669368 5_3:-6647960 Msa0794720:CDS
ATATCAGAAAGCCACTTCCG+GGG 0.673117 5_3:-6648406 Msa0794720:CDS
TTGTCTGAAAAGAAACACGA+AGG 0.674925 5_3:+6649707 None:intergenic
ACCGGCTGATGCGAAAACCA+TGG 0.679532 5_3:-6648132 Msa0794720:CDS
GCGTTTGTGAAGTTGAAGGG+AGG 0.681440 5_3:-6647828 Msa0794720:CDS
ACAACGATGTCACCTACACA+TGG 0.682235 5_3:-6649556 Msa0794720:CDS
AGCACAAAGTAACACACACG+GGG 0.696294 5_3:-6648472 Msa0794720:CDS
GGGAGACCTGATGAGTATTG+GGG 0.710890 5_3:-6647864 Msa0794720:CDS
AAGGTAGTAGTGATGACAGG+CGG 0.720822 5_3:-6648383 Msa0794720:CDS
ATGAGTCTGAGACCATGTGT+AGG 0.729803 5_3:+6649544 None:intergenic
CACAAAGTAACACACACGGG+GGG 0.730025 5_3:-6648470 Msa0794720:CDS
GCACAAAGTAACACACACGG+GGG 0.764468 5_3:-6648471 Msa0794720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTCTGTTAATTT+TGG - chr5_3:6647831-6647850 Msa0794720:CDS 10.0%
!!! TTTTTTTTTTCTGTTAATTT+TGG - chr5_3:6647831-6647850 Msa0794720:CDS 10.0%
!!! AATTTGAATTTGTTTGAAAA+AGG + chr5_3:6647753-6647772 None:intergenic 15.0%
!!! AATTTGAATTTGTTTGAAAA+AGG + chr5_3:6647753-6647772 None:intergenic 15.0%
!!! TTTGATTTAGTTCATTCATA+TGG - chr5_3:6648890-6648909 Msa0794720:CDS 20.0%
!! AATTTACTCGTTAAATTCAT+TGG + chr5_3:6649741-6649760 None:intergenic 20.0%
!!! TTTGATTTAGTTCATTCATA+TGG - chr5_3:6648890-6648909 Msa0794720:CDS 20.0%
!! AATTTACTCGTTAAATTCAT+TGG + chr5_3:6649741-6649760 None:intergenic 20.0%
! AAATACACGATCATATGATA+TGG - chr5_3:6647425-6647444 Msa0794720:three_prime_UTR 25.0%
!!! TTTGTTATTGTAAACAATGG+CGG + chr5_3:6647615-6647634 None:intergenic 25.0%
!!! GACTTTGTTATTGTAAACAA+TGG + chr5_3:6647618-6647637 None:intergenic 25.0%
! TCGCTAGATTATAGATTTAA+AGG + chr5_3:6647793-6647812 None:intergenic 25.0%
!!! TAATCTAGCGATTTTTCAAT+TGG - chr5_3:6647802-6647821 Msa0794720:CDS 25.0%
!!! TTAATTTTGGTTTTGATCGA+AGG - chr5_3:6647844-6647863 Msa0794720:CDS 25.0%
!! AAACTACTTAGAATTTTGCA+TGG - chr5_3:6647995-6648014 Msa0794720:CDS 25.0%
! GAAGAAATATGATTACAAGT+TGG - chr5_3:6648051-6648070 Msa0794720:CDS 25.0%
! GTAATTCATGATCTACAAAA+AGG + chr5_3:6648277-6648296 None:intergenic 25.0%
! TGAATTACTTGATATTGCTA+AGG - chr5_3:6648289-6648308 Msa0794720:CDS 25.0%
! GAATTACTTGATATTGCTAA+GGG - chr5_3:6648290-6648309 Msa0794720:CDS 25.0%
! GAAGTGTAATTCAAAGAAAT+TGG + chr5_3:6648482-6648501 None:intergenic 25.0%
! ATTTCTTTGAATTACACTTC+AGG - chr5_3:6648482-6648501 Msa0794720:CDS 25.0%
! AAAGAAATGTAACTGCTAAA+GGG - chr5_3:6648690-6648709 Msa0794720:CDS 25.0%
!!! GACACAAAAATATGTTTTGA+AGG - chr5_3:6649510-6649529 Msa0794720:CDS 25.0%
!!! AAAATATGTTTTGAAGGAGA+AGG - chr5_3:6649516-6649535 Msa0794720:CDS 25.0%
!! CTTTAGAAATGTATTACAGT+CGG + chr5_3:6649582-6649601 None:intergenic 25.0%
! AAATACACGATCATATGATA+TGG - chr5_3:6647425-6647444 Msa0794720:three_prime_UTR 25.0%
!!! TTTGTTATTGTAAACAATGG+CGG + chr5_3:6647615-6647634 None:intergenic 25.0%
!!! GACTTTGTTATTGTAAACAA+TGG + chr5_3:6647618-6647637 None:intergenic 25.0%
! TCGCTAGATTATAGATTTAA+AGG + chr5_3:6647793-6647812 None:intergenic 25.0%
!!! TAATCTAGCGATTTTTCAAT+TGG - chr5_3:6647802-6647821 Msa0794720:CDS 25.0%
!!! TTAATTTTGGTTTTGATCGA+AGG - chr5_3:6647844-6647863 Msa0794720:CDS 25.0%
!! AAACTACTTAGAATTTTGCA+TGG - chr5_3:6647995-6648014 Msa0794720:CDS 25.0%
! GAAGAAATATGATTACAAGT+TGG - chr5_3:6648051-6648070 Msa0794720:CDS 25.0%
! GTAATTCATGATCTACAAAA+AGG + chr5_3:6648277-6648296 None:intergenic 25.0%
! TGAATTACTTGATATTGCTA+AGG - chr5_3:6648289-6648308 Msa0794720:CDS 25.0%
! GAATTACTTGATATTGCTAA+GGG - chr5_3:6648290-6648309 Msa0794720:CDS 25.0%
! GAAGTGTAATTCAAAGAAAT+TGG + chr5_3:6648482-6648501 None:intergenic 25.0%
! ATTTCTTTGAATTACACTTC+AGG - chr5_3:6648482-6648501 Msa0794720:CDS 25.0%
! AAAGAAATGTAACTGCTAAA+GGG - chr5_3:6648690-6648709 Msa0794720:CDS 25.0%
!!! GACACAAAAATATGTTTTGA+AGG - chr5_3:6649510-6649529 Msa0794720:CDS 25.0%
!!! AAAATATGTTTTGAAGGAGA+AGG - chr5_3:6649516-6649535 Msa0794720:CDS 25.0%
!! CTTTAGAAATGTATTACAGT+CGG + chr5_3:6649582-6649601 None:intergenic 25.0%
CAAAAGATCAAACAGTTAGA+AGG - chr5_3:6647517-6647536 Msa0794720:three_prime_UTR 30.0%
GATATTATAAAGCACAGACT+CGG + chr5_3:6647971-6647990 None:intergenic 30.0%
GAATTTGCACTTATTTGTGT+AGG - chr5_3:6648109-6648128 Msa0794720:CDS 30.0%
TCATACATTGCTGGAATATT+AGG + chr5_3:6648149-6648168 None:intergenic 30.0%
!!! TCCACTTTTGGTCTTAATTT+TGG - chr5_3:6648349-6648368 Msa0794720:CDS 30.0%
TCCAAAATTAAGACCAAAAG+TGG + chr5_3:6648353-6648372 None:intergenic 30.0%
!!! ACTTTTGGTCTTAATTTTGG+AGG - chr5_3:6648352-6648371 Msa0794720:CDS 30.0%
!!! CTTTTGGTCTTAATTTTGGA+GGG - chr5_3:6648353-6648372 Msa0794720:CDS 30.0%
ATTCTCATAGATCAATGTTC+CGG + chr5_3:6648402-6648421 None:intergenic 30.0%
TATGAGAATCTTATATCCGA+AGG - chr5_3:6648413-6648432 Msa0794720:CDS 30.0%
ATGAGAATCTTATATCCGAA+GGG - chr5_3:6648414-6648433 Msa0794720:CDS 30.0%
TGAAAAGACCAAAAGATGAA+TGG - chr5_3:6648453-6648472 Msa0794720:CDS 30.0%
GAAAAGACCAAAAGATGAAT+GGG - chr5_3:6648454-6648473 Msa0794720:CDS 30.0%
AATTAAGATAAGCACCTCTA+TGG + chr5_3:6648541-6648560 None:intergenic 30.0%
AGGTGCTTATCTTAATTCTT+TGG - chr5_3:6648544-6648563 Msa0794720:CDS 30.0%
CTTTAGCAGTTACATTTCTT+TGG + chr5_3:6648691-6648710 None:intergenic 30.0%
CAAAGAAATGTAACTGCTAA+AGG - chr5_3:6648689-6648708 Msa0794720:CDS 30.0%
ATTAATGAGTTCAGAACTGT+TGG + chr5_3:6648764-6648783 None:intergenic 30.0%
!!! ATTTTTTAGGATGGAAGAAC+TGG - chr5_3:6648865-6648884 Msa0794720:CDS 30.0%
!!! TTTTTTAGGATGGAAGAACT+GGG - chr5_3:6648866-6648885 Msa0794720:CDS 30.0%
TATGGTTTGACAGAAACTTA+TGG - chr5_3:6648908-6648927 Msa0794720:CDS 30.0%
TGTGATGAATGGATATCTAA+AGG - chr5_3:6649120-6649139 Msa0794720:intron 30.0%
GTTACATAGAACTTAAGGAT+CGG - chr5_3:6649218-6649237 Msa0794720:intron 30.0%
TCGAAGGATATTATCATATC+TGG - chr5_3:6649241-6649260 Msa0794720:intron 30.0%
CGAAGGATATTATCATATCT+GGG - chr5_3:6649242-6649261 Msa0794720:intron 30.0%
GAAGGATATTATCATATCTG+GGG - chr5_3:6649243-6649262 Msa0794720:intron 30.0%
AAGGATATTATCATATCTGG+GGG - chr5_3:6649244-6649263 Msa0794720:intron 30.0%
!! AACATATTTTTGTGTCTTGC+CGG + chr5_3:6649506-6649525 None:intergenic 30.0%
!! TAGTCCTTTTCTTTTTAGCA+GGG + chr5_3:6649791-6649810 None:intergenic 30.0%
CAAAAGATCAAACAGTTAGA+AGG - chr5_3:6647517-6647536 Msa0794720:three_prime_UTR 30.0%
GATATTATAAAGCACAGACT+CGG + chr5_3:6647971-6647990 None:intergenic 30.0%
GAATTTGCACTTATTTGTGT+AGG - chr5_3:6648109-6648128 Msa0794720:CDS 30.0%
TCATACATTGCTGGAATATT+AGG + chr5_3:6648149-6648168 None:intergenic 30.0%
!!! TCCACTTTTGGTCTTAATTT+TGG - chr5_3:6648349-6648368 Msa0794720:CDS 30.0%
TCCAAAATTAAGACCAAAAG+TGG + chr5_3:6648353-6648372 None:intergenic 30.0%
!!! ACTTTTGGTCTTAATTTTGG+AGG - chr5_3:6648352-6648371 Msa0794720:CDS 30.0%
!!! CTTTTGGTCTTAATTTTGGA+GGG - chr5_3:6648353-6648372 Msa0794720:CDS 30.0%
ATTCTCATAGATCAATGTTC+CGG + chr5_3:6648402-6648421 None:intergenic 30.0%
TATGAGAATCTTATATCCGA+AGG - chr5_3:6648413-6648432 Msa0794720:CDS 30.0%
ATGAGAATCTTATATCCGAA+GGG - chr5_3:6648414-6648433 Msa0794720:CDS 30.0%
TGAAAAGACCAAAAGATGAA+TGG - chr5_3:6648453-6648472 Msa0794720:CDS 30.0%
GAAAAGACCAAAAGATGAAT+GGG - chr5_3:6648454-6648473 Msa0794720:CDS 30.0%
AATTAAGATAAGCACCTCTA+TGG + chr5_3:6648541-6648560 None:intergenic 30.0%
AGGTGCTTATCTTAATTCTT+TGG - chr5_3:6648544-6648563 Msa0794720:CDS 30.0%
CTTTAGCAGTTACATTTCTT+TGG + chr5_3:6648691-6648710 None:intergenic 30.0%
CAAAGAAATGTAACTGCTAA+AGG - chr5_3:6648689-6648708 Msa0794720:CDS 30.0%
ATTAATGAGTTCAGAACTGT+TGG + chr5_3:6648764-6648783 None:intergenic 30.0%
!!! ATTTTTTAGGATGGAAGAAC+TGG - chr5_3:6648865-6648884 Msa0794720:CDS 30.0%
!!! TTTTTTAGGATGGAAGAACT+GGG - chr5_3:6648866-6648885 Msa0794720:CDS 30.0%
TATGGTTTGACAGAAACTTA+TGG - chr5_3:6648908-6648927 Msa0794720:CDS 30.0%
TGTGATGAATGGATATCTAA+AGG - chr5_3:6649120-6649139 Msa0794720:intron 30.0%
GTTACATAGAACTTAAGGAT+CGG - chr5_3:6649218-6649237 Msa0794720:intron 30.0%
TCGAAGGATATTATCATATC+TGG - chr5_3:6649241-6649260 Msa0794720:intron 30.0%
CGAAGGATATTATCATATCT+GGG - chr5_3:6649242-6649261 Msa0794720:intron 30.0%
GAAGGATATTATCATATCTG+GGG - chr5_3:6649243-6649262 Msa0794720:intron 30.0%
AAGGATATTATCATATCTGG+GGG - chr5_3:6649244-6649263 Msa0794720:intron 30.0%
!! AACATATTTTTGTGTCTTGC+CGG + chr5_3:6649506-6649525 None:intergenic 30.0%
!! TAGTCCTTTTCTTTTTAGCA+GGG + chr5_3:6649791-6649810 None:intergenic 30.0%
TTGTCTGAAAAGAAACACGA+AGG + chr5_3:6647500-6647519 None:intergenic 35.0%
TCACATATTCACATGTGTCT+AGG + chr5_3:6647901-6647920 None:intergenic 35.0%
!!! ATTTTGGTGTTCCAATGTCA+GGG - chr5_3:6648174-6648193 Msa0794720:CDS 35.0%
! TACAAAAAGGATTTTCGCGT+CGG + chr5_3:6648264-6648283 None:intergenic 35.0%
! AACTACCAATCTTCCACTTT+TGG - chr5_3:6648337-6648356 Msa0794720:CDS 35.0%
TAAGACCAAAAGTGGAAGAT+TGG + chr5_3:6648345-6648364 None:intergenic 35.0%
TTCTCATAGATCAATGTTCC+GGG + chr5_3:6648401-6648420 None:intergenic 35.0%
CTCAAAATCAAGTTTCCCTT+CGG + chr5_3:6648432-6648451 None:intergenic 35.0%
! ATTGGATCCCATTCATCTTT+TGG + chr5_3:6648464-6648483 None:intergenic 35.0%
TGGCTATATACTACACCTTT+AGG + chr5_3:6648521-6648540 None:intergenic 35.0%
CATCCATTGCAATGAAACAT+GGG + chr5_3:6648623-6648642 None:intergenic 35.0%
TAAGCACAAAGTAACACACA+CGG - chr5_3:6648730-6648749 Msa0794720:CDS 35.0%
TCCATCCTAAAAAATACGTC+CGG + chr5_3:6648860-6648879 None:intergenic 35.0%
GCAACACAAGAGTCATTTAA+AGG - chr5_3:6649151-6649170 Msa0794720:intron 35.0%
ACACAAGAGTCATTTAAAGG+TGG - chr5_3:6649154-6649173 Msa0794720:intron 35.0%
AAGAGTCATTTAAAGGTGGA+TGG - chr5_3:6649158-6649177 Msa0794720:intron 35.0%
CATTTAAAGGTGGATGGTTT+AGG - chr5_3:6649164-6649183 Msa0794720:intron 35.0%
TGACGGTTACATAGAACTTA+AGG - chr5_3:6649213-6649232 Msa0794720:intron 35.0%
AAACATTAGCACCATTGAGT+TGG - chr5_3:6649270-6649289 Msa0794720:intron 35.0%
AATAACACCTTCCAACTCAA+TGG + chr5_3:6649284-6649303 None:intergenic 35.0%
TGCTTGAAGAAAGCTTCAAT+TGG - chr5_3:6649690-6649709 Msa0794720:five_prime_UTR 35.0%
ATAGCCCTGCTAAAAAGAAA+AGG - chr5_3:6649784-6649803 Msa0794720:five_prime_UTR 35.0%
!! CTAGTCCTTTTCTTTTTAGC+AGG + chr5_3:6649792-6649811 None:intergenic 35.0%
GACTGCTAAATTGATCTTTC+CGG - chr5_3:6649811-6649830 Msa0794720:five_prime_UTR 35.0%
TTGTCTGAAAAGAAACACGA+AGG + chr5_3:6647500-6647519 None:intergenic 35.0%
TCACATATTCACATGTGTCT+AGG + chr5_3:6647901-6647920 None:intergenic 35.0%
!!! ATTTTGGTGTTCCAATGTCA+GGG - chr5_3:6648174-6648193 Msa0794720:CDS 35.0%
! TACAAAAAGGATTTTCGCGT+CGG + chr5_3:6648264-6648283 None:intergenic 35.0%
! AACTACCAATCTTCCACTTT+TGG - chr5_3:6648337-6648356 Msa0794720:CDS 35.0%
TAAGACCAAAAGTGGAAGAT+TGG + chr5_3:6648345-6648364 None:intergenic 35.0%
TTCTCATAGATCAATGTTCC+GGG + chr5_3:6648401-6648420 None:intergenic 35.0%
CTCAAAATCAAGTTTCCCTT+CGG + chr5_3:6648432-6648451 None:intergenic 35.0%
! ATTGGATCCCATTCATCTTT+TGG + chr5_3:6648464-6648483 None:intergenic 35.0%
TGGCTATATACTACACCTTT+AGG + chr5_3:6648521-6648540 None:intergenic 35.0%
CATCCATTGCAATGAAACAT+GGG + chr5_3:6648623-6648642 None:intergenic 35.0%
TAAGCACAAAGTAACACACA+CGG - chr5_3:6648730-6648749 Msa0794720:CDS 35.0%
TCCATCCTAAAAAATACGTC+CGG + chr5_3:6648860-6648879 None:intergenic 35.0%
GCAACACAAGAGTCATTTAA+AGG - chr5_3:6649151-6649170 Msa0794720:intron 35.0%
ACACAAGAGTCATTTAAAGG+TGG - chr5_3:6649154-6649173 Msa0794720:intron 35.0%
AAGAGTCATTTAAAGGTGGA+TGG - chr5_3:6649158-6649177 Msa0794720:intron 35.0%
CATTTAAAGGTGGATGGTTT+AGG - chr5_3:6649164-6649183 Msa0794720:intron 35.0%
TGACGGTTACATAGAACTTA+AGG - chr5_3:6649213-6649232 Msa0794720:intron 35.0%
AAACATTAGCACCATTGAGT+TGG - chr5_3:6649270-6649289 Msa0794720:intron 35.0%
AATAACACCTTCCAACTCAA+TGG + chr5_3:6649284-6649303 None:intergenic 35.0%
TGCTTGAAGAAAGCTTCAAT+TGG - chr5_3:6649690-6649709 Msa0794720:five_prime_UTR 35.0%
ATAGCCCTGCTAAAAAGAAA+AGG - chr5_3:6649784-6649803 Msa0794720:five_prime_UTR 35.0%
!! CTAGTCCTTTTCTTTTTAGC+AGG + chr5_3:6649792-6649811 None:intergenic 35.0%
ACATGACATCCACGCAATAT+GGG - chr5_3:6647400-6647419 Msa0794720:three_prime_UTR 40.0%
AAACAGTTAGAAGGTGACGA+TGG - chr5_3:6647526-6647545 Msa0794720:three_prime_UTR 40.0%
GCTTCTTCCATTTCTCAACT+CGG - chr5_3:6647701-6647720 Msa0794720:CDS 40.0%
! AGAAACACCGAGTTGAGAAA+TGG + chr5_3:6647711-6647730 None:intergenic 40.0%
AAGGAACAAACCACATCATG+AGG + chr5_3:6647734-6647753 None:intergenic 40.0%
ATTTGTGTAGGTTGCTGTGT+TGG - chr5_3:6648121-6648140 Msa0794720:CDS 40.0%
AAATGCAGCTCATACATTGC+TGG + chr5_3:6648158-6648177 None:intergenic 40.0%
! GCAATGTATGAGCTGCATTT+TGG - chr5_3:6648158-6648177 Msa0794720:CDS 40.0%
!!! CATTTTGGTGTTCCAATGTC+AGG - chr5_3:6648173-6648192 Msa0794720:CDS 40.0%
!!! TTTTGGTGTTCCAATGTCAG+GGG - chr5_3:6648175-6648194 Msa0794720:CDS 40.0%
CGAATCATGACGAGTATTCA+AGG + chr5_3:6648213-6648232 None:intergenic 40.0%
TACTCGTCATGATTCGTTGA+TGG - chr5_3:6648217-6648236 Msa0794720:CDS 40.0%
! CGAAGGGAAACTTGATTTTG+AGG - chr5_3:6648430-6648449 Msa0794720:CDS 40.0%
GGAACAACATCAAGTCCTAA+AGG - chr5_3:6648503-6648522 Msa0794720:CDS 40.0%
GGTGTAGTATATAGCCATAG+AGG - chr5_3:6648524-6648543 Msa0794720:CDS 40.0%
CAATGAGATGAAGTCTATGC+CGG - chr5_3:6648580-6648599 Msa0794720:CDS 40.0%
AGTCTATGCCGGTGTATTTA+TGG - chr5_3:6648591-6648610 Msa0794720:CDS 40.0%
GGAACACACCATAAATACAC+CGG + chr5_3:6648602-6648621 None:intergenic 40.0%
GTTCCCATGTTTCATTGCAA+TGG - chr5_3:6648617-6648636 Msa0794720:CDS 40.0%
CCATCCATTGCAATGAAACA+TGG + chr5_3:6648624-6648643 None:intergenic 40.0%
CCATGTTTCATTGCAATGGA+TGG - chr5_3:6648621-6648640 Msa0794720:CDS 40.0%
AAGCACAAAGTAACACACAC+GGG - chr5_3:6648731-6648750 Msa0794720:CDS 40.0%
TGATATCAGAAAGCCACTTC+CGG - chr5_3:6648796-6648815 Msa0794720:CDS 40.0%
ATCCTAAAAAATACGTCCGG+TGG + chr5_3:6648857-6648876 None:intergenic 40.0%
!!! ACCGGACGTATTTTTTAGGA+TGG - chr5_3:6648856-6648875 Msa0794720:CDS 40.0%
TTGACAGAAACTTATGGTCC+TGG - chr5_3:6648914-6648933 Msa0794720:CDS 40.0%
TTCCATGTGCAAATTGATCC+AGG + chr5_3:6648935-6648954 None:intergenic 40.0%
TTTGCACATGGAAACCAGAA+TGG - chr5_3:6648942-6648961 Msa0794720:CDS 40.0%
! CGTCAAGGAGTACAACATAT+TGG - chr5_3:6649004-6649023 Msa0794720:CDS 40.0%
! AGGAGTACAACATATTGGAC+TGG - chr5_3:6649009-6649028 Msa0794720:CDS 40.0%
! GTACAACATATTGGACTGGA+AGG - chr5_3:6649013-6649032 Msa0794720:CDS 40.0%
! TGTCACAATGAAGAGTGTAC+CGG - chr5_3:6649054-6649073 Msa0794720:CDS 40.0%
! TTGGGAGTAAAGCATTCTGA+CGG - chr5_3:6649196-6649215 Msa0794720:intron 40.0%
!! ATTAGCACCATTGAGTTGGA+AGG - chr5_3:6649274-6649293 Msa0794720:intron 40.0%
TTCAACTTCACAAACGCACA+AGG + chr5_3:6649373-6649392 None:intergenic 40.0%
TTGTGCGTTTGTGAAGTTGA+AGG - chr5_3:6649372-6649391 Msa0794720:intron 40.0%
TGTGCGTTTGTGAAGTTGAA+GGG - chr5_3:6649373-6649392 Msa0794720:intron 40.0%
!! AAAGCGTTTGCCTCGTTTTA+TGG - chr5_3:6649438-6649457 Msa0794720:intron 40.0%
!!! GTTTTTGGAGCCATAAAACG+AGG + chr5_3:6649451-6649470 None:intergenic 40.0%
! TCAGCAAACACGACAGTTTT+TGG + chr5_3:6649466-6649485 None:intergenic 40.0%
!!! TGTTTTGAAGGAGAAGGCAA+AGG - chr5_3:6649522-6649541 Msa0794720:CDS 40.0%
ACATGACATCCACGCAATAT+GGG - chr5_3:6647400-6647419 Msa0794720:three_prime_UTR 40.0%
AAACAGTTAGAAGGTGACGA+TGG - chr5_3:6647526-6647545 Msa0794720:three_prime_UTR 40.0%
GCTTCTTCCATTTCTCAACT+CGG - chr5_3:6647701-6647720 Msa0794720:CDS 40.0%
! AGAAACACCGAGTTGAGAAA+TGG + chr5_3:6647711-6647730 None:intergenic 40.0%
AAGGAACAAACCACATCATG+AGG + chr5_3:6647734-6647753 None:intergenic 40.0%
ATTTGTGTAGGTTGCTGTGT+TGG - chr5_3:6648121-6648140 Msa0794720:CDS 40.0%
AAATGCAGCTCATACATTGC+TGG + chr5_3:6648158-6648177 None:intergenic 40.0%
! GCAATGTATGAGCTGCATTT+TGG - chr5_3:6648158-6648177 Msa0794720:CDS 40.0%
!!! CATTTTGGTGTTCCAATGTC+AGG - chr5_3:6648173-6648192 Msa0794720:CDS 40.0%
!!! TTTTGGTGTTCCAATGTCAG+GGG - chr5_3:6648175-6648194 Msa0794720:CDS 40.0%
CGAATCATGACGAGTATTCA+AGG + chr5_3:6648213-6648232 None:intergenic 40.0%
TACTCGTCATGATTCGTTGA+TGG - chr5_3:6648217-6648236 Msa0794720:CDS 40.0%
! CGAAGGGAAACTTGATTTTG+AGG - chr5_3:6648430-6648449 Msa0794720:CDS 40.0%
GGAACAACATCAAGTCCTAA+AGG - chr5_3:6648503-6648522 Msa0794720:CDS 40.0%
GGTGTAGTATATAGCCATAG+AGG - chr5_3:6648524-6648543 Msa0794720:CDS 40.0%
CAATGAGATGAAGTCTATGC+CGG - chr5_3:6648580-6648599 Msa0794720:CDS 40.0%
AGTCTATGCCGGTGTATTTA+TGG - chr5_3:6648591-6648610 Msa0794720:CDS 40.0%
GGAACACACCATAAATACAC+CGG + chr5_3:6648602-6648621 None:intergenic 40.0%
GTTCCCATGTTTCATTGCAA+TGG - chr5_3:6648617-6648636 Msa0794720:CDS 40.0%
CCATCCATTGCAATGAAACA+TGG + chr5_3:6648624-6648643 None:intergenic 40.0%
CCATGTTTCATTGCAATGGA+TGG - chr5_3:6648621-6648640 Msa0794720:CDS 40.0%
AAGCACAAAGTAACACACAC+GGG - chr5_3:6648731-6648750 Msa0794720:CDS 40.0%
TGATATCAGAAAGCCACTTC+CGG - chr5_3:6648796-6648815 Msa0794720:CDS 40.0%
ATCCTAAAAAATACGTCCGG+TGG + chr5_3:6648857-6648876 None:intergenic 40.0%
!!! ACCGGACGTATTTTTTAGGA+TGG - chr5_3:6648856-6648875 Msa0794720:CDS 40.0%
TTGACAGAAACTTATGGTCC+TGG - chr5_3:6648914-6648933 Msa0794720:CDS 40.0%
TTCCATGTGCAAATTGATCC+AGG + chr5_3:6648935-6648954 None:intergenic 40.0%
TTTGCACATGGAAACCAGAA+TGG - chr5_3:6648942-6648961 Msa0794720:CDS 40.0%
! CGTCAAGGAGTACAACATAT+TGG - chr5_3:6649004-6649023 Msa0794720:CDS 40.0%
! AGGAGTACAACATATTGGAC+TGG - chr5_3:6649009-6649028 Msa0794720:CDS 40.0%
! GTACAACATATTGGACTGGA+AGG - chr5_3:6649013-6649032 Msa0794720:CDS 40.0%
! TGTCACAATGAAGAGTGTAC+CGG - chr5_3:6649054-6649073 Msa0794720:CDS 40.0%
! TTGGGAGTAAAGCATTCTGA+CGG - chr5_3:6649196-6649215 Msa0794720:intron 40.0%
!! ATTAGCACCATTGAGTTGGA+AGG - chr5_3:6649274-6649293 Msa0794720:intron 40.0%
TTCAACTTCACAAACGCACA+AGG + chr5_3:6649373-6649392 None:intergenic 40.0%
TTGTGCGTTTGTGAAGTTGA+AGG - chr5_3:6649372-6649391 Msa0794720:intron 40.0%
TGTGCGTTTGTGAAGTTGAA+GGG - chr5_3:6649373-6649392 Msa0794720:intron 40.0%
!! AAAGCGTTTGCCTCGTTTTA+TGG - chr5_3:6649438-6649457 Msa0794720:intron 40.0%
!!! GTTTTTGGAGCCATAAAACG+AGG + chr5_3:6649451-6649470 None:intergenic 40.0%
! TCAGCAAACACGACAGTTTT+TGG + chr5_3:6649466-6649485 None:intergenic 40.0%
!!! TGTTTTGAAGGAGAAGGCAA+AGG - chr5_3:6649522-6649541 Msa0794720:CDS 40.0%
CATATTGCGTGGATGTCATG+TGG + chr5_3:6647401-6647420 None:intergenic 45.0%
CACATGACATCCACGCAATA+TGG - chr5_3:6647399-6647418 Msa0794720:three_prime_UTR 45.0%
CATGACATCCACGCAATATG+GGG - chr5_3:6647401-6647420 Msa0794720:three_prime_UTR 45.0%
TGTATTTGCCCCATATTGCG+TGG + chr5_3:6647412-6647431 None:intergenic 45.0%
AGTTAGAAGGTGACGATGGA+AGG - chr5_3:6647530-6647549 Msa0794720:three_prime_UTR 45.0%
GAACGTAGTTAGCGTTGCAT+TGG + chr5_3:6647562-6647581 None:intergenic 45.0%
AAGAAGCTGATTGGAGTGAG+AGG + chr5_3:6647584-6647603 None:intergenic 45.0%
TCTCACTCCAATCAGCTTCT+TGG - chr5_3:6647583-6647602 Msa0794720:three_prime_UTR 45.0%
GGTGACATCGTTGTAGATGA+TGG + chr5_3:6647642-6647661 None:intergenic 45.0%
ACAACGATGTCACCTACACA+TGG - chr5_3:6647648-6647667 Msa0794720:CDS 45.0%
! ATGAGTCTGAGACCATGTGT+AGG + chr5_3:6647663-6647682 None:intergenic 45.0%
CTTGAGCAGCAATACTCCAA+GGG + chr5_3:6648652-6648671 None:intergenic 45.0%
AGCACAAAGTAACACACACG+GGG - chr5_3:6648732-6648751 Msa0794720:CDS 45.0%
AGTGGCTTTCTGATATCAGG+TGG + chr5_3:6648794-6648813 None:intergenic 45.0%
GGAAGTGGCTTTCTGATATC+AGG + chr5_3:6648797-6648816 None:intergenic 45.0%
GATATCAGAAAGCCACTTCC+GGG - chr5_3:6648797-6648816 Msa0794720:CDS 45.0%
ATATCAGAAAGCCACTTCCG+GGG - chr5_3:6648798-6648817 Msa0794720:CDS 45.0%
AAGGTAGTAGTGATGACAGG+CGG - chr5_3:6648821-6648840 Msa0794720:CDS 45.0%
CTAAAAAATACGTCCGGTGG+CGG + chr5_3:6648854-6648873 None:intergenic 45.0%
GTCCTGGATCAATTTGCACA+TGG - chr5_3:6648930-6648949 Msa0794720:CDS 45.0%
GCGAAAAAGAAGTCACGTCA+AGG - chr5_3:6648989-6649008 Msa0794720:CDS 45.0%
GGTACACTCTTCATTGTGAC+AGG + chr5_3:6649055-6649074 None:intergenic 45.0%
CATGGGTGAGGTGATGTTTA+GGG - chr5_3:6649090-6649109 Msa0794720:intron 45.0%
ATGGGTGAGGTGATGTTTAG+GGG - chr5_3:6649091-6649110 Msa0794720:intron 45.0%
AGGGGAAACACTGTGATGAA+TGG - chr5_3:6649109-6649128 Msa0794720:intron 45.0%
! AAAGGTGGATGGTTTAGGAC+TGG - chr5_3:6649169-6649188 Msa0794720:intron 45.0%
! ATGGTTTAGGACTGGTGACT+TGG - chr5_3:6649177-6649196 Msa0794720:intron 45.0%
! TGGTTTAGGACTGGTGACTT+GGG - chr5_3:6649178-6649197 Msa0794720:intron 45.0%
AGAACTTAAGGATCGGTCGA+AGG - chr5_3:6649225-6649244 Msa0794720:intron 45.0%
TAGTCATCCAGCAGTTGTTG+AGG - chr5_3:6649306-6649325 Msa0794720:intron 45.0%
TTGTTGAGGCAGCTGTTGTT+GGG - chr5_3:6649320-6649339 Msa0794720:intron 45.0%
TTGGGAGACCTGATGAGTAT+TGG - chr5_3:6649338-6649357 Msa0794720:intron 45.0%
TGGGAGACCTGATGAGTATT+GGG - chr5_3:6649339-6649358 Msa0794720:intron 45.0%
CGTTTGTGAAGTTGAAGGGA+GGG - chr5_3:6649377-6649396 Msa0794720:intron 45.0%
GATCTGCCAAAGACATCAAC+CGG - chr5_3:6649484-6649503 Msa0794720:CDS 45.0%
AAGGAGAAGGCAAAGGCTAT+GGG - chr5_3:6649529-6649548 Msa0794720:CDS 45.0%
CATATTGCGTGGATGTCATG+TGG + chr5_3:6647401-6647420 None:intergenic 45.0%
CACATGACATCCACGCAATA+TGG - chr5_3:6647399-6647418 Msa0794720:three_prime_UTR 45.0%
CATGACATCCACGCAATATG+GGG - chr5_3:6647401-6647420 Msa0794720:three_prime_UTR 45.0%
TGTATTTGCCCCATATTGCG+TGG + chr5_3:6647412-6647431 None:intergenic 45.0%
AGTTAGAAGGTGACGATGGA+AGG - chr5_3:6647530-6647549 Msa0794720:three_prime_UTR 45.0%
GAACGTAGTTAGCGTTGCAT+TGG + chr5_3:6647562-6647581 None:intergenic 45.0%
AAGAAGCTGATTGGAGTGAG+AGG + chr5_3:6647584-6647603 None:intergenic 45.0%
TCTCACTCCAATCAGCTTCT+TGG - chr5_3:6647583-6647602 Msa0794720:three_prime_UTR 45.0%
GGTGACATCGTTGTAGATGA+TGG + chr5_3:6647642-6647661 None:intergenic 45.0%
ACAACGATGTCACCTACACA+TGG - chr5_3:6647648-6647667 Msa0794720:CDS 45.0%
! ATGAGTCTGAGACCATGTGT+AGG + chr5_3:6647663-6647682 None:intergenic 45.0%
CTTGAGCAGCAATACTCCAA+GGG + chr5_3:6648652-6648671 None:intergenic 45.0%
AGCACAAAGTAACACACACG+GGG - chr5_3:6648732-6648751 Msa0794720:CDS 45.0%
AGTGGCTTTCTGATATCAGG+TGG + chr5_3:6648794-6648813 None:intergenic 45.0%
GGAAGTGGCTTTCTGATATC+AGG + chr5_3:6648797-6648816 None:intergenic 45.0%
GATATCAGAAAGCCACTTCC+GGG - chr5_3:6648797-6648816 Msa0794720:CDS 45.0%
ATATCAGAAAGCCACTTCCG+GGG - chr5_3:6648798-6648817 Msa0794720:CDS 45.0%
AAGGTAGTAGTGATGACAGG+CGG - chr5_3:6648821-6648840 Msa0794720:CDS 45.0%
CTAAAAAATACGTCCGGTGG+CGG + chr5_3:6648854-6648873 None:intergenic 45.0%
GTCCTGGATCAATTTGCACA+TGG - chr5_3:6648930-6648949 Msa0794720:CDS 45.0%
GCGAAAAAGAAGTCACGTCA+AGG - chr5_3:6648989-6649008 Msa0794720:CDS 45.0%
GGTACACTCTTCATTGTGAC+AGG + chr5_3:6649055-6649074 None:intergenic 45.0%
CATGGGTGAGGTGATGTTTA+GGG - chr5_3:6649090-6649109 Msa0794720:intron 45.0%
ATGGGTGAGGTGATGTTTAG+GGG - chr5_3:6649091-6649110 Msa0794720:intron 45.0%
AGGGGAAACACTGTGATGAA+TGG - chr5_3:6649109-6649128 Msa0794720:intron 45.0%
! AAAGGTGGATGGTTTAGGAC+TGG - chr5_3:6649169-6649188 Msa0794720:intron 45.0%
! ATGGTTTAGGACTGGTGACT+TGG - chr5_3:6649177-6649196 Msa0794720:intron 45.0%
! TGGTTTAGGACTGGTGACTT+GGG - chr5_3:6649178-6649197 Msa0794720:intron 45.0%
AGAACTTAAGGATCGGTCGA+AGG - chr5_3:6649225-6649244 Msa0794720:intron 45.0%
TAGTCATCCAGCAGTTGTTG+AGG - chr5_3:6649306-6649325 Msa0794720:intron 45.0%
TTGTTGAGGCAGCTGTTGTT+GGG - chr5_3:6649320-6649339 Msa0794720:intron 45.0%
TTGGGAGACCTGATGAGTAT+TGG - chr5_3:6649338-6649357 Msa0794720:intron 45.0%
TGGGAGACCTGATGAGTATT+GGG - chr5_3:6649339-6649358 Msa0794720:intron 45.0%
CGTTTGTGAAGTTGAAGGGA+GGG - chr5_3:6649377-6649396 Msa0794720:intron 45.0%
GATCTGCCAAAGACATCAAC+CGG - chr5_3:6649484-6649503 Msa0794720:CDS 45.0%
AAGGAGAAGGCAAAGGCTAT+GGG - chr5_3:6649529-6649548 Msa0794720:CDS 45.0%
CGGTGTTTCTCCTCATGATG+TGG - chr5_3:6647721-6647740 Msa0794720:CDS 50.0%
GTATCCGACATGTGTCTGTC+TGG - chr5_3:6647875-6647894 Msa0794720:CDS 50.0%
TAGGCCAGACAGACACATGT+CGG + chr5_3:6647882-6647901 None:intergenic 50.0%
CATAGAACAGCCCCTGACAT+TGG + chr5_3:6648188-6648207 None:intergenic 50.0%
AATGTTCCGGGAGAGACTGA+TGG + chr5_3:6648389-6648408 None:intergenic 50.0%
CCTTGAGCAGCAATACTCCA+AGG + chr5_3:6648653-6648672 None:intergenic 50.0%
!! CCTTGGAGTATTGCTGCTCA+AGG - chr5_3:6648650-6648669 Msa0794720:CDS 50.0%
!! TGGAGTATTGCTGCTCAAGG+TGG - chr5_3:6648653-6648672 Msa0794720:CDS 50.0%
GCACAAAGTAACACACACGG+GGG - chr5_3:6648733-6648752 Msa0794720:CDS 50.0%
CACAAAGTAACACACACGGG+GGG - chr5_3:6648734-6648753 Msa0794720:CDS 50.0%
GTCATCACTACTACCTTCCC+CGG + chr5_3:6648818-6648837 None:intergenic 50.0%
GGGAAGGTAGTAGTGATGAC+AGG - chr5_3:6648818-6648837 Msa0794720:CDS 50.0%
!!! CGCCACCGGACGTATTTTTT+AGG - chr5_3:6648852-6648871 Msa0794720:CDS 50.0%
TGATGCGAAAACCATGGGTG+AGG - chr5_3:6649078-6649097 Msa0794720:intron 50.0%
CCTAAACATCACCTCACCCA+TGG + chr5_3:6649092-6649111 None:intergenic 50.0%
CCATGGGTGAGGTGATGTTT+AGG - chr5_3:6649089-6649108 Msa0794720:intron 50.0%
GTTGTTGAGGCAGCTGTTGT+TGG - chr5_3:6649319-6649338 Msa0794720:intron 50.0%
! GGGAGACCTGATGAGTATTG+GGG - chr5_3:6649340-6649359 Msa0794720:intron 50.0%
GTCTCTCCCCAATACTCATC+AGG + chr5_3:6649349-6649368 None:intergenic 50.0%
GCGTTTGTGAAGTTGAAGGG+AGG - chr5_3:6649376-6649395 Msa0794720:intron 50.0%
! GTCTTGCCGGTTGATGTCTT+TGG + chr5_3:6649493-6649512 None:intergenic 50.0%
GAAGGAGAAGGCAAAGGCTA+TGG - chr5_3:6649528-6649547 Msa0794720:CDS 50.0%
CGGTGTTTCTCCTCATGATG+TGG - chr5_3:6647721-6647740 Msa0794720:CDS 50.0%
GTATCCGACATGTGTCTGTC+TGG - chr5_3:6647875-6647894 Msa0794720:CDS 50.0%
TAGGCCAGACAGACACATGT+CGG + chr5_3:6647882-6647901 None:intergenic 50.0%
CATAGAACAGCCCCTGACAT+TGG + chr5_3:6648188-6648207 None:intergenic 50.0%
AATGTTCCGGGAGAGACTGA+TGG + chr5_3:6648389-6648408 None:intergenic 50.0%
CCTTGAGCAGCAATACTCCA+AGG + chr5_3:6648653-6648672 None:intergenic 50.0%
!! CCTTGGAGTATTGCTGCTCA+AGG - chr5_3:6648650-6648669 Msa0794720:CDS 50.0%
!! TGGAGTATTGCTGCTCAAGG+TGG - chr5_3:6648653-6648672 Msa0794720:CDS 50.0%
GCACAAAGTAACACACACGG+GGG - chr5_3:6648733-6648752 Msa0794720:CDS 50.0%
CACAAAGTAACACACACGGG+GGG - chr5_3:6648734-6648753 Msa0794720:CDS 50.0%
GTCATCACTACTACCTTCCC+CGG + chr5_3:6648818-6648837 None:intergenic 50.0%
GGGAAGGTAGTAGTGATGAC+AGG - chr5_3:6648818-6648837 Msa0794720:CDS 50.0%
!!! CGCCACCGGACGTATTTTTT+AGG - chr5_3:6648852-6648871 Msa0794720:CDS 50.0%
TGATGCGAAAACCATGGGTG+AGG - chr5_3:6649078-6649097 Msa0794720:intron 50.0%
CCTAAACATCACCTCACCCA+TGG + chr5_3:6649092-6649111 None:intergenic 50.0%
CCATGGGTGAGGTGATGTTT+AGG - chr5_3:6649089-6649108 Msa0794720:intron 50.0%
GTTGTTGAGGCAGCTGTTGT+TGG - chr5_3:6649319-6649338 Msa0794720:intron 50.0%
! GGGAGACCTGATGAGTATTG+GGG - chr5_3:6649340-6649359 Msa0794720:intron 50.0%
GTCTCTCCCCAATACTCATC+AGG + chr5_3:6649349-6649368 None:intergenic 50.0%
GCGTTTGTGAAGTTGAAGGG+AGG - chr5_3:6649376-6649395 Msa0794720:intron 50.0%
! GTCTTGCCGGTTGATGTCTT+TGG + chr5_3:6649493-6649512 None:intergenic 50.0%
GAAGGAGAAGGCAAAGGCTA+TGG - chr5_3:6649528-6649547 Msa0794720:CDS 50.0%
GAGCGCTCCAAGAAGCTGAT+TGG + chr5_3:6647593-6647612 None:intergenic 55.0%
GCTCATCCATCAGTCTCTCC+CGG - chr5_3:6648380-6648399 Msa0794720:CDS 55.0%
GCAATGGATGGTGTCTCCCT+TGG - chr5_3:6648633-6648652 Msa0794720:CDS 55.0%
ACTACTACCTTCCCCGGAAG+TGG + chr5_3:6648812-6648831 None:intergenic 55.0%
! AAAAATACGTCCGGTGGCGG+TGG + chr5_3:6648851-6648870 None:intergenic 55.0%
CGAGACAGGCTACTCCATTC+TGG + chr5_3:6648959-6648978 None:intergenic 55.0%
ATGGAGTAGCCTGTCTCGAG+AGG - chr5_3:6648961-6648980 Msa0794720:CDS 55.0%
ACCGGCTGATGCGAAAACCA+TGG - chr5_3:6649072-6649091 Msa0794720:CDS 55.0%
! CCCATGGTTTTCGCATCAGC+CGG + chr5_3:6649076-6649095 None:intergenic 55.0%
CCGGCTGATGCGAAAACCAT+GGG - chr5_3:6649073-6649092 Msa0794720:CDS 55.0%
ACAGCTGCCTCAACAACTGC+TGG + chr5_3:6649316-6649335 None:intergenic 55.0%
! GAAGGGAGGGCACAATGCTA+CGG - chr5_3:6649390-6649409 Msa0794720:intron 55.0%
TGCGTGGATGTCATGTGGTC+CGG + chr5_3:6647396-6647415 None:intergenic 55.0%
GAGCGCTCCAAGAAGCTGAT+TGG + chr5_3:6647593-6647612 None:intergenic 55.0%
GCTCATCCATCAGTCTCTCC+CGG - chr5_3:6648380-6648399 Msa0794720:CDS 55.0%
GCAATGGATGGTGTCTCCCT+TGG - chr5_3:6648633-6648652 Msa0794720:CDS 55.0%
ACTACTACCTTCCCCGGAAG+TGG + chr5_3:6648812-6648831 None:intergenic 55.0%
! AAAAATACGTCCGGTGGCGG+TGG + chr5_3:6648851-6648870 None:intergenic 55.0%
CGAGACAGGCTACTCCATTC+TGG + chr5_3:6648959-6648978 None:intergenic 55.0%
ATGGAGTAGCCTGTCTCGAG+AGG - chr5_3:6648961-6648980 Msa0794720:CDS 55.0%
ACCGGCTGATGCGAAAACCA+TGG - chr5_3:6649072-6649091 Msa0794720:CDS 55.0%
! CCCATGGTTTTCGCATCAGC+CGG + chr5_3:6649076-6649095 None:intergenic 55.0%
CCGGCTGATGCGAAAACCAT+GGG - chr5_3:6649073-6649092 Msa0794720:CDS 55.0%
ACAGCTGCCTCAACAACTGC+TGG + chr5_3:6649316-6649335 None:intergenic 55.0%
! GAAGGGAGGGCACAATGCTA+CGG - chr5_3:6649390-6649409 Msa0794720:intron 55.0%
CAGAAAGCCACTTCCGGGGA+AGG - chr5_3:6648802-6648821 Msa0794720:CDS 60.0%
TAGCCTGTCTCGAGAGGAGC+AGG - chr5_3:6648967-6648986 Msa0794720:CDS 60.0%
CAGAAAGCCACTTCCGGGGA+AGG - chr5_3:6648802-6648821 Msa0794720:CDS 60.0%
TAGCCTGTCTCGAGAGGAGC+AGG - chr5_3:6648967-6648986 Msa0794720:CDS 60.0%
TCGCCTGCTCCTCTCGAGAC+AGG + chr5_3:6648973-6648992 None:intergenic 65.0%
TCGCCTGCTCCTCTCGAGAC+AGG + chr5_3:6648973-6648992 None:intergenic 65.0%
AGGCGGTGCTCCACCGCCAC+CGG - chr5_3:6648838-6648857 Msa0794720:CDS 75.0%
AGGCGGTGCTCCACCGCCAC+CGG - chr5_3:6648838-6648857 Msa0794720:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 6647395 6649831 6647395 ID=Msa0794720;Name=Msa0794720
chr5_3 mRNA 6647395 6649831 6647395 ID=Msa0794720-mRNA-1;Parent=Msa0794720;Name=Msa0794720-mRNA-1;_AED=0.01;_eAED=0.01;_QI=150|1|1|1|1|1|2|243|551
chr5_3 exon 6647395 6649095 6647395 ID=Msa0794720-mRNA-1:exon:2674;Parent=Msa0794720-mRNA-1
chr5_3 exon 6649484 6649831 6649484 ID=Msa0794720-mRNA-1:exon:2673;Parent=Msa0794720-mRNA-1
chr5_3 five_prime_UTR 6649682 6649831 6649682 ID=Msa0794720-mRNA-1:five_prime_utr;Parent=Msa0794720-mRNA-1
chr5_3 CDS 6649484 6649681 6649484 ID=Msa0794720-mRNA-1:cds;Parent=Msa0794720-mRNA-1
chr5_3 CDS 6647638 6649095 6647638 ID=Msa0794720-mRNA-1:cds;Parent=Msa0794720-mRNA-1
chr5_3 three_prime_UTR 6647395 6647637 6647395 ID=Msa0794720-mRNA-1:three_prime_utr;Parent=Msa0794720-mRNA-1
Gene Sequence

>Msa0794720

ATGGAAGGTACTATCCAATGCAACGCTAACTACGTTCCTCTCACTCCAATCAGCTTCTTGGAGCGCTCCGCCATTGTTTACAATAACAAAGTCTCCATCATCTACAACGATGTCACCTACACATGGTCTCAGACTCATCAACGATGTATCAAACTCGCTTCTTCCATTTCTCAACTCGGTGTTTCTCCTCATGATGTGGTTGCTGTGTTGGCTCCTAATATTCCAGCAATGTATGAGCTGCATTTTGGTGTTCCAATGTCAGGGGCTGTTCTATGTACCTTGAATACTCGTCATGATTCGTTGATGGTTTCGTTGTTGTTAAAGCATTCCGACGCGAAAATCCTTTTTGTAGATCATGAATTACTTGATATTGCTAAGGGAGCACTTGAAATTTTGTCGAAATCAACTACCAATCTTCCACTTTTGGTCTTAATTTTGGAGGGTGATGCTCATCCATCAGTCTCTCCCGGAACATTGATCTATGAGAATCTTATATCCGAAGGGAAACTTGATTTTGAGGTGAAAAGACCAAAAGATGAATGGGATCCAATTTCTTTGAATTACACTTCAGGAACAACATCAAGTCCTAAAGGTGTAGTATATAGCCATAGAGGTGCTTATCTTAATTCTTTGGCTACAATTCTTCTCAATGAGATGAAGTCTATGCCGGTGTATTTATGGTGTGTTCCCATGTTTCATTGCAATGGATGGTGTCTCCCTTGGAGTATTGCTGCTCAAGGTGGCACAAATGTTTGCCAAAGAAATGTAACTGCTAAAGGGATATTTGACAATATTTTTAAGCACAAAGTAACACACACGGGGGGTGCACCAACAGTTCTGAACTCATTAATAAATGCACCACCTGATATCAGAAAGCCACTTCCGGGGAAGGTAGTAGTGATGACAGGCGGTGCTCCACCGCCACCGGACGTATTTTTTAGGATGGAAGAACTGGGATTTGATTTAGTTCATTCATATGGTTTGACAGAAACTTATGGTCCTGGATCAATTTGCACATGGAAACCAGAATGGAGTAGCCTGTCTCGAGAGGAGCAGGCGAAAAAGAAGTCACGTCAAGGAGTACAACATATTGGACTGGAAGGACTTGACATAAAAGATCCTGTCACAATGAAGAGTGTACCGGCTGATGCGAAAACCATGGGTGAGGTGATGTTTAGGGGAAACACTGTGATGAATGGATATCTAAAGGATTTAAAAGCAACACAAGAGTCATTTAAAGGTGGATGGTTTAGGACTGGTGACTTGGGAGTAAAGCATTCTGACGGTTACATAGAACTTAAGGATCGGTCGAAGGATATTATCATATCTGGGGGAGAAAACATTAGCACCATTGAGTTGGAAGGTGTTATTTATAGTCATCCAGCAGTTGTTGAGGCAGCTGTTGTTGGGAGACCTGATGAGTATTGGGGAGAGACACCTTGTGCGTTTGTGAAGTTGAAGGGAGGGCACAATGCTACGGAAGAAGAGATAATACAATTCTGTCAAAAGCGTTTGCCTCGTTTTATGGCTCCAAAAACTGTCGTGTTTGCTGATCTGCCAAAGACATCAACCGGCAAGACACAAAAATATGTTTTGAAGGAGAAGGCAAAGGCTATGGGAAGCTTGTCTAAGAAAAAGAATACAAGCCGACTGTAA
Protein sequence

>Msa0794720

MEGTIQCNANYVPLTPISFLERSAIVYNNKVSIIYNDVTYTWSQTHQRCIKLASSISQLGVSPHDVVAVLAPNIPAMYELHFGVPMSGAVLCTLNTRHDSLMVSLLLKHSDAKILFVDHELLDIAKGALEILSKSTTNLPLLVLILEGDAHPSVSPGTLIYENLISEGKLDFEVKRPKDEWDPISLNYTSGTTSSPKGVVYSHRGAYLNSLATILLNEMKSMPVYLWCVPMFHCNGWCLPWSIAAQGGTNVCQRNVTAKGIFDNIFKHKVTHTGGAPTVLNSLINAPPDIRKPLPGKVVVMTGGAPPPPDVFFRMEELGFDLVHSYGLTETYGPGSICTWKPEWSSLSREEQAKKKSRQGVQHIGLEGLDIKDPVTMKSVPADAKTMGEVMFRGNTVMNGYLKDLKATQESFKGGWFRTGDLGVKHSDGYIELKDRSKDIIISGGENISTIELEGVIYSHPAVVEAAVVGRPDEYWGETPCAFVKLKGGHNATEEEIIQFCQKRLPRFMAPKTVVFADLPKTSTGKTQKYVLKEKAKAMGSLSKKKNTSRL*