AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0755250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755250 MtrunA17_Chr5g0400141 99.184 245 1 1 1 245 1 244 2.96e-179 491
Msa0755250 MtrunA17_Chr4g0048231 27.083 192 129 4 21 208 8 192 1.13e-11 63.9
Msa0755250 MtrunA17_Chr7g0271811 26.291 213 144 5 21 226 73 279 3.53e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755250 AT2G38740.1 70.870 230 67 0 11 240 12 241 2.45e-123 350
Msa0755250 AT1G56500.2 27.103 214 141 5 21 226 74 280 2.23e-13 69.7
Msa0755250 AT1G56500.1 27.103 214 141 5 21 226 74 280 2.52e-13 69.7
Msa0755250 AT4G21470.1 27.941 204 132 6 10 208 2 195 6.54e-12 65.1

Find 93 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATGCTGCCCACAATTT+TGG 0.109444 5_2:+9031501 None:intergenic
TTCTTTCATGCTGTTATTAT+TGG 0.134310 5_2:-9031819 Msa0755250:CDS
TTTCAAAGCAACACTGATTA+TGG 0.178476 5_2:+9031329 None:intergenic
TCGTTGCAGGATTCTGTTTC+AGG 0.193983 5_2:-9031636 Msa0755250:intron
CAGTAAATCCTCTGGGTTTC+GGG 0.200098 5_2:+9031566 None:intergenic
AGACCTTTCAAGTAGGGTTC+TGG 0.300746 5_2:+9031768 None:intergenic
TGCTTCAATTGGAGCAAGTT+TGG 0.305673 5_2:+9032445 None:intergenic
GAGCAACTGAAGCCGTTAAA+TGG 0.315774 5_2:-9031954 Msa0755250:CDS
GGCATGTGAATTTGATTCTT+TGG 0.325832 5_2:-9033196 Msa0755250:five_prime_UTR
AAAGCCTGCCTTTCTGATAA+AGG 0.327178 5_2:-9031535 Msa0755250:CDS
GTGCGACCGGCATAATTTCT+TGG 0.335993 5_2:-9031435 Msa0755250:three_prime_UTR
TCAGTAAATCCTCTGGGTTT+CGG 0.346064 5_2:+9031565 None:intergenic
GCTGCTGGGATGCCTGTTAT+TGG 0.354239 5_2:-9031597 Msa0755250:CDS
TGAGAGAGAGTGAGGGAGGA+AGG 0.365956 5_2:-9031222 Msa0755250:three_prime_UTR
TTTAAAGTTTGTAGAAGATA+AGG 0.369133 5_2:-9032094 Msa0755250:CDS
CTATAAAGTATAAAGAATAA+TGG 0.379494 5_2:+9031176 None:intergenic
TCCAAAATTGTGGGCAGCAT+TGG 0.379963 5_2:-9031502 Msa0755250:CDS
GCTCCCATCAGTAAATCCTC+TGG 0.391301 5_2:+9031558 None:intergenic
ATGAGTTCTGCATTTGGTCT+TGG 0.393932 5_2:+9031867 None:intergenic
ACAAAATTATACAGGTAATC+TGG 0.395086 5_2:+9031379 None:intergenic
TGCATTTGGTCTTGGAGCAT+TGG 0.395388 5_2:+9031875 None:intergenic
TGAAGCTCTCAAAGCATCTA+AGG 0.401317 5_2:-9031745 Msa0755250:CDS
CGGGTAGATATACCAATAAC+AGG 0.404855 5_2:+9031585 None:intergenic
AGAGAGTGAGGGAGGAAGGG+AGG 0.410107 5_2:-9031218 Msa0755250:three_prime_UTR
GAGAGAATGAGTTCTGCATT+TGG 0.417411 5_2:+9031861 None:intergenic
TTTCACGAAAAGCATAATAG+TGG 0.419783 5_2:+9032378 None:intergenic
TCAAACAGCACTGCTTCAAT+TGG 0.423109 5_2:+9032434 None:intergenic
GCCTTGATAAAGTGAGGAAA+TGG 0.427010 5_2:-9031932 Msa0755250:CDS
ATCAAAGCAGGAGTCGCTGC+TGG 0.427325 5_2:-9031612 Msa0755250:CDS
ACTTTATCAAGGCCATTTAA+CGG 0.428311 5_2:+9031942 None:intergenic
CGAAAAGCATAATAGTGGAT+TGG 0.428774 5_2:+9032383 None:intergenic
GAAAAGCATAATAGTGGATT+GGG 0.432417 5_2:+9032384 None:intergenic
GGATCACACATTTATATTTG+AGG 0.435509 5_2:-9031724 Msa0755250:intron
GGTTGTCAGATTGGTTTCAA+TGG 0.438195 5_2:-9032216 Msa0755250:intron
TTCAAGTAGGGTTCTGGATG+AGG 0.438758 5_2:+9031774 None:intergenic
CCACACACGAAGCTAAACTA+TGG 0.440508 5_2:-9033108 Msa0755250:exon
ATTGCCTTGGATCTCTTCCC+TGG 0.441811 5_2:-9032132 Msa0755250:CDS
GGATCTCTTCCCTGGTGATC+GGG 0.441858 5_2:-9032124 Msa0755250:CDS
TCCATTTCCTCACTTTATCA+AGG 0.442894 5_2:+9031931 None:intergenic
TGGATCTCTTCCCTGGTGAT+CGG 0.444007 5_2:-9032125 Msa0755250:CDS
TTACCTTTCGACGGAATTCT+CGG 0.446019 5_2:+9033079 None:intergenic
GAGAGTGAGGGAGGAAGGGA+GGG 0.447743 5_2:-9031217 Msa0755250:three_prime_UTR
CTCCCATCAGTAAATCCTCT+GGG 0.451240 5_2:+9031559 None:intergenic
AAACCTCGTTCCCGATCACC+AGG 0.467601 5_2:+9032114 None:intergenic
AAGATAAGGAAGCCATGTTT+CGG 0.470711 5_2:-9032080 Msa0755250:CDS
TATTAAAGTAAAAGAATAAG+TGG 0.477288 5_2:-9033233 Msa0755250:five_prime_UTR
ATGAATGAATGAGAGAGGTT+AGG 0.482178 5_2:+9033138 None:intergenic
TCACATGTATTGCAATTCCT+TGG 0.482605 5_2:+9031242 None:intergenic
GAGAGAGAGTGAGGGAGGAA+GGG 0.491806 5_2:-9031221 Msa0755250:three_prime_UTR
TTATACTTTACCACGACGAA+TGG 0.497432 5_2:+9033167 None:intergenic
CCCCTGCAACAAAATTATAC+AGG 0.500332 5_2:+9031371 None:intergenic
ATGTGAATTTGATTCTTTGG+CGG 0.501927 5_2:-9033193 Msa0755250:five_prime_UTR
AATGTGATAGTTGGCAATGA+AGG 0.502789 5_2:-9031271 Msa0755250:three_prime_UTR
TAATCCTTTATCAGAAAGGC+AGG 0.505843 5_2:+9031531 None:intergenic
ATCATAATCCTTTATCAGAA+AGG 0.507299 5_2:+9031527 None:intergenic
ATCATTGTGCTTGCCAGCAA+CGG 0.511684 5_2:+9032158 None:intergenic
GCTTCAAGACCTTTCAAGTA+GGG 0.512510 5_2:+9031762 None:intergenic
GAACTCATTCTCTCAAAACT+TGG 0.514892 5_2:-9031852 Msa0755250:CDS
TTGGAAGAACTTGACAAGTC+CGG 0.524640 5_2:-9031483 Msa0755250:CDS
GCACAATGATGACATTGCCT+TGG 0.533662 5_2:-9032145 Msa0755250:CDS
CATGTGAGAGAGAGTGAGGG+AGG 0.534460 5_2:-9031226 Msa0755250:three_prime_UTR
ATTATGATGATCCAAAATTG+TGG 0.545112 5_2:-9031512 Msa0755250:CDS
GTAGGGTTCTGGATGAGGCT+TGG 0.551862 5_2:+9031779 None:intergenic
CATCCAGAACCCTACTTGAA+AGG 0.553649 5_2:-9031771 Msa0755250:CDS
TCTGTTTCAGGAATCAAAGC+AGG 0.557269 5_2:-9031624 Msa0755250:CDS
TAAGTGGGTGGCGGCATATG+CGG 0.559269 5_2:-9033217 Msa0755250:five_prime_UTR
TGTCAGATTGGTTTCAATGG+AGG 0.559859 5_2:-9032213 Msa0755250:intron
AACCCAGAGGATTTACTGAT+GGG 0.570236 5_2:-9031561 Msa0755250:CDS
TTCCCTGGTGATCGGGAACG+AGG 0.572268 5_2:-9032117 Msa0755250:CDS
TCAAAGCAGGAGTCGCTGCT+GGG 0.574198 5_2:-9031611 Msa0755250:CDS
AAACCCAGAGGATTTACTGA+TGG 0.582964 5_2:-9031562 Msa0755250:CDS
AATACATGTGAGAGAGAGTG+AGG 0.586139 5_2:-9031230 Msa0755250:three_prime_UTR
AGCTTCAAGACCTTTCAAGT+AGG 0.587847 5_2:+9031761 None:intergenic
GGCAATGAAGGTCAATGCCA+AGG 0.588147 5_2:-9031259 Msa0755250:three_prime_UTR
AGGAAATGGATTGAAGATCG+TGG 0.589739 5_2:-9031918 Msa0755250:CDS
ATTAAAGTAAAAGAATAAGT+GGG 0.592323 5_2:-9033232 Msa0755250:five_prime_UTR
TAGGGTTTACCTCCGAAACA+TGG 0.604667 5_2:+9032068 None:intergenic
AAGGAAGCGTTACCTTTCGA+CGG 0.608896 5_2:+9033070 None:intergenic
GTAAAAGAATAAGTGGGTGG+CGG 0.612033 5_2:-9033226 Msa0755250:five_prime_UTR
TGGAGGTAATCCTATAACAG+AGG 0.615734 5_2:-9032196 Msa0755250:CDS
CCATAGTTTAGCTTCGTGTG+TGG 0.616267 5_2:+9033108 None:intergenic
TTATGATGATCCAAAATTGT+GGG 0.617657 5_2:-9031511 Msa0755250:CDS
AGTGAATGAATGAATGAGAG+AGG 0.625240 5_2:+9033133 None:intergenic
TAAATGGCCTTGATAAAGTG+AGG 0.625840 5_2:-9031938 Msa0755250:CDS
CTTCCGAGAATTCCGTCGAA+AGG 0.626588 5_2:-9033082 Msa0755250:intron
TTGGCGGATTCCATTCGTCG+TGG 0.639712 5_2:-9033177 Msa0755250:five_prime_UTR
AAAGTAAAAGAATAAGTGGG+TGG 0.642601 5_2:-9033229 Msa0755250:five_prime_UTR
ATAAGGAAGCCATGTTTCGG+AGG 0.643823 5_2:-9032077 Msa0755250:intron
ATACATGTGAGAGAGAGTGA+GGG 0.649507 5_2:-9031229 Msa0755250:three_prime_UTR
ATCACCAGGGAAGAGATCCA+AGG 0.667902 5_2:+9032128 None:intergenic
GCAGTGCTGTTTGATATAGA+CGG 0.671189 5_2:-9032425 Msa0755250:CDS
AACCTCGTTCCCGATCACCA+GGG 0.706366 5_2:+9032115 None:intergenic
TATATCTACCCGAAACCCAG+AGG 0.748163 5_2:-9031574 Msa0755250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATACTATAATATCTATT+TGG + chr5_2:9032121-9032140 None:intergenic 10.0%
!! TAAATACTATAATATCTATT+TGG + chr5_2:9032121-9032140 None:intergenic 10.0%
!! TATTAAAGTAAAAGAATAAG+TGG - chr5_2:9031211-9031230 Msa0755250:three_prime_UTR 15.0%
!! ATTAAAGTAAAAGAATAAGT+GGG - chr5_2:9031212-9031231 Msa0755250:three_prime_UTR 15.0%
!! ATCTTATTATCATGAAAAAT+AGG + chr5_2:9031485-9031504 None:intergenic 15.0%
!!! TTAACACTAAATATATTTTG+AGG + chr5_2:9031608-9031627 None:intergenic 15.0%
!!! TCATATTTTGTATAAAAGAA+TGG + chr5_2:9031759-9031778 None:intergenic 15.0%
!! TATTAGAAATTAACAAATGT+TGG - chr5_2:9032204-9032223 Msa0755250:CDS 15.0%
!! CTATAAAGTATAAAGAATAA+TGG + chr5_2:9033271-9033290 None:intergenic 15.0%
!! TATTAAAGTAAAAGAATAAG+TGG - chr5_2:9031211-9031230 Msa0755250:three_prime_UTR 15.0%
!! ATTAAAGTAAAAGAATAAGT+GGG - chr5_2:9031212-9031231 Msa0755250:three_prime_UTR 15.0%
!! ATCTTATTATCATGAAAAAT+AGG + chr5_2:9031485-9031504 None:intergenic 15.0%
!!! TTAACACTAAATATATTTTG+AGG + chr5_2:9031608-9031627 None:intergenic 15.0%
!!! TCATATTTTGTATAAAAGAA+TGG + chr5_2:9031759-9031778 None:intergenic 15.0%
!! TATTAGAAATTAACAAATGT+TGG - chr5_2:9032204-9032223 Msa0755250:CDS 15.0%
!! CTATAAAGTATAAAGAATAA+TGG + chr5_2:9033271-9033290 None:intergenic 15.0%
!!! TATTTTTCATAATTTGTCTG+CGG + chr5_2:9031185-9031204 None:intergenic 20.0%
!! AAATGAAATCAAGAATATGA+AGG + chr5_2:9031396-9031415 None:intergenic 20.0%
!!! CACAAAGATTTTAAGTTTAT+CGG + chr5_2:9031866-9031885 None:intergenic 20.0%
!! ATAAAAAATTCCTCTGTTAT+AGG + chr5_2:9032261-9032280 None:intergenic 20.0%
!!! TTTAAAGTTTGTAGAAGATA+AGG - chr5_2:9032350-9032369 Msa0755250:intron 20.0%
!! GAATAAGAACAAATTATCTA+AGG + chr5_2:9032766-9032785 None:intergenic 20.0%
!!! TTCAAAATTTTAATGAGAAC+CGG + chr5_2:9032983-9033002 None:intergenic 20.0%
!!! TTTTGTAATAATGTGATAGT+TGG - chr5_2:9033164-9033183 Msa0755250:five_prime_UTR 20.0%
!!! TATTTTTCATAATTTGTCTG+CGG + chr5_2:9031185-9031204 None:intergenic 20.0%
!! AAATGAAATCAAGAATATGA+AGG + chr5_2:9031396-9031415 None:intergenic 20.0%
!!! CACAAAGATTTTAAGTTTAT+CGG + chr5_2:9031866-9031885 None:intergenic 20.0%
!! ATAAAAAATTCCTCTGTTAT+AGG + chr5_2:9032261-9032280 None:intergenic 20.0%
!!! TTTAAAGTTTGTAGAAGATA+AGG - chr5_2:9032350-9032369 Msa0755250:intron 20.0%
!! GAATAAGAACAAATTATCTA+AGG + chr5_2:9032766-9032785 None:intergenic 20.0%
!!! TTCAAAATTTTAATGAGAAC+CGG + chr5_2:9032983-9033002 None:intergenic 20.0%
!!! TTTTGTAATAATGTGATAGT+TGG - chr5_2:9033164-9033183 Msa0755250:five_prime_UTR 20.0%
! ATAAAAGAATGGAGATAACA+AGG + chr5_2:9031748-9031767 None:intergenic 25.0%
! TATCCATACTTTATTCCAAA+GGG - chr5_2:9031810-9031829 Msa0755250:CDS 25.0%
! TATAAATTGGCATATGACTA+AGG - chr5_2:9032167-9032186 Msa0755250:CDS 25.0%
! TAGAAATTAACAAATGTTGG+TGG - chr5_2:9032207-9032226 Msa0755250:CDS 25.0%
! ATCTTGAAATTTAGCACAAT+GGG + chr5_2:9032425-9032444 None:intergenic 25.0%
! AATCTTGAAATTTAGCACAA+TGG + chr5_2:9032426-9032445 None:intergenic 25.0%
! TTCTTTCATGCTGTTATTAT+TGG - chr5_2:9032625-9032644 Msa0755250:intron 25.0%
! ATCATAATCCTTTATCAGAA+AGG + chr5_2:9032920-9032939 None:intergenic 25.0%
! ATTATGATGATCCAAAATTG+TGG - chr5_2:9032932-9032951 Msa0755250:intron 25.0%
! TTATGATGATCCAAAATTGT+GGG - chr5_2:9032933-9032952 Msa0755250:intron 25.0%
!! TTTTTACCAAGAAATTATGC+CGG + chr5_2:9033018-9033037 None:intergenic 25.0%
! ACAAAATTATACAGGTAATC+TGG + chr5_2:9033068-9033087 None:intergenic 25.0%
! ATAAAAGAATGGAGATAACA+AGG + chr5_2:9031748-9031767 None:intergenic 25.0%
! TATCCATACTTTATTCCAAA+GGG - chr5_2:9031810-9031829 Msa0755250:CDS 25.0%
! TATAAATTGGCATATGACTA+AGG - chr5_2:9032167-9032186 Msa0755250:CDS 25.0%
! TAGAAATTAACAAATGTTGG+TGG - chr5_2:9032207-9032226 Msa0755250:CDS 25.0%
! ATCTTGAAATTTAGCACAAT+GGG + chr5_2:9032425-9032444 None:intergenic 25.0%
! AATCTTGAAATTTAGCACAA+TGG + chr5_2:9032426-9032445 None:intergenic 25.0%
! TTCTTTCATGCTGTTATTAT+TGG - chr5_2:9032625-9032644 Msa0755250:intron 25.0%
! ATCATAATCCTTTATCAGAA+AGG + chr5_2:9032920-9032939 None:intergenic 25.0%
! ATTATGATGATCCAAAATTG+TGG - chr5_2:9032932-9032951 Msa0755250:intron 25.0%
! TTATGATGATCCAAAATTGT+GGG - chr5_2:9032933-9032952 Msa0755250:intron 25.0%
!! TTTTTACCAAGAAATTATGC+CGG + chr5_2:9033018-9033037 None:intergenic 25.0%
! ACAAAATTATACAGGTAATC+TGG + chr5_2:9033068-9033087 None:intergenic 25.0%
AAAGTAAAAGAATAAGTGGG+TGG - chr5_2:9031215-9031234 Msa0755250:three_prime_UTR 30.0%
ATGTGAATTTGATTCTTTGG+CGG - chr5_2:9031251-9031270 Msa0755250:three_prime_UTR 30.0%
CCATCTTATAAAGAAACCAA+CGG + chr5_2:9031675-9031694 None:intergenic 30.0%
TATGAACTTCAAAGCAAGTA+AGG - chr5_2:9031774-9031793 Msa0755250:CDS 30.0%
ATAAAGTATGGATAGATTCG+AGG + chr5_2:9031804-9031823 None:intergenic 30.0%
CTATCCATACTTTATTCCAA+AGG - chr5_2:9031809-9031828 Msa0755250:CDS 30.0%
CTTAAAATCTTTGTGCTAAC+CGG - chr5_2:9031871-9031890 Msa0755250:CDS 30.0%
TGACACAACATGAAAGTAAT+GGG + chr5_2:9031961-9031980 None:intergenic 30.0%
!! GAAAAGCATAATAGTGGATT+GGG + chr5_2:9032063-9032082 None:intergenic 30.0%
! TTTCACGAAAAGCATAATAG+TGG + chr5_2:9032069-9032088 None:intergenic 30.0%
TCTTGAAATTTAGCACAATG+GGG + chr5_2:9032424-9032443 None:intergenic 30.0%
GAAACATATTTCCTTGATGA+TGG - chr5_2:9032448-9032467 Msa0755250:CDS 30.0%
ACTTTATCAAGGCCATTTAA+CGG + chr5_2:9032505-9032524 None:intergenic 30.0%
GGATCACACATTTATATTTG+AGG - chr5_2:9032720-9032739 Msa0755250:intron 30.0%
! TACCTGTATAATTTTGTTGC+AGG - chr5_2:9033071-9033090 Msa0755250:intron 30.0%
! ACCTGTATAATTTTGTTGCA+GGG - chr5_2:9033072-9033091 Msa0755250:intron 30.0%
! TTTCAAAGCAACACTGATTA+TGG + chr5_2:9033118-9033137 None:intergenic 30.0%
AAAGTAAAAGAATAAGTGGG+TGG - chr5_2:9031215-9031234 Msa0755250:three_prime_UTR 30.0%
ATGTGAATTTGATTCTTTGG+CGG - chr5_2:9031251-9031270 Msa0755250:three_prime_UTR 30.0%
CCATCTTATAAAGAAACCAA+CGG + chr5_2:9031675-9031694 None:intergenic 30.0%
TATGAACTTCAAAGCAAGTA+AGG - chr5_2:9031774-9031793 Msa0755250:CDS 30.0%
ATAAAGTATGGATAGATTCG+AGG + chr5_2:9031804-9031823 None:intergenic 30.0%
CTATCCATACTTTATTCCAA+AGG - chr5_2:9031809-9031828 Msa0755250:CDS 30.0%
CTTAAAATCTTTGTGCTAAC+CGG - chr5_2:9031871-9031890 Msa0755250:CDS 30.0%
TGACACAACATGAAAGTAAT+GGG + chr5_2:9031961-9031980 None:intergenic 30.0%
!! GAAAAGCATAATAGTGGATT+GGG + chr5_2:9032063-9032082 None:intergenic 30.0%
! TTTCACGAAAAGCATAATAG+TGG + chr5_2:9032069-9032088 None:intergenic 30.0%
TCTTGAAATTTAGCACAATG+GGG + chr5_2:9032424-9032443 None:intergenic 30.0%
GAAACATATTTCCTTGATGA+TGG - chr5_2:9032448-9032467 Msa0755250:CDS 30.0%
ACTTTATCAAGGCCATTTAA+CGG + chr5_2:9032505-9032524 None:intergenic 30.0%
GGATCACACATTTATATTTG+AGG - chr5_2:9032720-9032739 Msa0755250:intron 30.0%
! TACCTGTATAATTTTGTTGC+AGG - chr5_2:9033071-9033090 Msa0755250:intron 30.0%
! ACCTGTATAATTTTGTTGCA+GGG - chr5_2:9033072-9033091 Msa0755250:intron 30.0%
! TTTCAAAGCAACACTGATTA+TGG + chr5_2:9033118-9033137 None:intergenic 30.0%
!! TTTTCATAATTTGTCTGCGG+AGG + chr5_2:9031182-9031201 None:intergenic 35.0%
GGCATGTGAATTTGATTCTT+TGG - chr5_2:9031248-9031267 Msa0755250:three_prime_UTR 35.0%
TTATACTTTACCACGACGAA+TGG + chr5_2:9031280-9031299 None:intergenic 35.0%
ATGAATGAATGAGAGAGGTT+AGG + chr5_2:9031309-9031328 None:intergenic 35.0%
AGTGAATGAATGAATGAGAG+AGG + chr5_2:9031314-9031333 None:intergenic 35.0%
!! TTTTGATCTTTAAGAGTGCG+AGG + chr5_2:9031524-9031543 None:intergenic 35.0%
ATTGAAGATGCACCCAATTT+AGG - chr5_2:9031543-9031562 Msa0755250:CDS 35.0%
TTGAAGATGCACCCAATTTA+GGG - chr5_2:9031544-9031563 Msa0755250:CDS 35.0%
! TTAGCAGAAGAAAGTGTGAA+TGG + chr5_2:9031582-9031601 None:intergenic 35.0%
TGCTATAGATATATTGCCGT+TGG - chr5_2:9031656-9031675 Msa0755250:intron 35.0%
!! CCGTTGGTTTCTTTATAAGA+TGG - chr5_2:9031672-9031691 Msa0755250:intron 35.0%
TCTAGACTATATGGCCATAA+AGG + chr5_2:9031718-9031737 None:intergenic 35.0%
AACTTCAAAGCAAGTAAGGT+AGG - chr5_2:9031778-9031797 Msa0755250:CDS 35.0%
!! GTTCCCTTTGGAATAAAGTA+TGG + chr5_2:9031816-9031835 None:intergenic 35.0%
GATTTCAAGAAAGTTCCCTT+TGG + chr5_2:9031828-9031847 None:intergenic 35.0%
AATCAACTCATGTCATGAAC+CGG + chr5_2:9031893-9031912 None:intergenic 35.0%
CTGACACAACATGAAAGTAA+TGG + chr5_2:9031962-9031981 None:intergenic 35.0%
!! CGAAAAGCATAATAGTGGAT+TGG + chr5_2:9032064-9032083 None:intergenic 35.0%
! TTTTCGTGAAATGCTTCAAG+AGG - chr5_2:9032078-9032097 Msa0755250:CDS 35.0%
AAGATAAGGAAGCCATGTTT+CGG - chr5_2:9032364-9032383 Msa0755250:intron 35.0%
ATCTAGATAGTCCATCATCA+AGG + chr5_2:9032462-9032481 None:intergenic 35.0%
! TAAATGGCCTTGATAAAGTG+AGG - chr5_2:9032506-9032525 Msa0755250:intron 35.0%
TCCATTTCCTCACTTTATCA+AGG + chr5_2:9032516-9032535 None:intergenic 35.0%
GAACTCATTCTCTCAAAACT+TGG - chr5_2:9032592-9032611 Msa0755250:intron 35.0%
TGTTCTTATTCTGCTTCTGA+CGG - chr5_2:9032775-9032794 Msa0755250:intron 35.0%
TAATCCTTTATCAGAAAGGC+AGG + chr5_2:9032916-9032935 None:intergenic 35.0%
! TTTTGAATTACTAGTGCGAC+CGG - chr5_2:9032996-9033015 Msa0755250:intron 35.0%
! CCTGTATAATTTTGTTGCAG+GGG - chr5_2:9033073-9033092 Msa0755250:intron 35.0%
! CTGTATAATTTTGTTGCAGG+GGG - chr5_2:9033074-9033093 Msa0755250:intron 35.0%
AATGTGATAGTTGGCAATGA+AGG - chr5_2:9033173-9033192 Msa0755250:five_prime_UTR 35.0%
TCACATGTATTGCAATTCCT+TGG + chr5_2:9033205-9033224 None:intergenic 35.0%
GGAGGACAAAATTATAGACT+AGG + chr5_2:9031164-9031183 None:intergenic 35.0%
!! TTTTCATAATTTGTCTGCGG+AGG + chr5_2:9031182-9031201 None:intergenic 35.0%
GGCATGTGAATTTGATTCTT+TGG - chr5_2:9031248-9031267 Msa0755250:three_prime_UTR 35.0%
TTATACTTTACCACGACGAA+TGG + chr5_2:9031280-9031299 None:intergenic 35.0%
ATGAATGAATGAGAGAGGTT+AGG + chr5_2:9031309-9031328 None:intergenic 35.0%
AGTGAATGAATGAATGAGAG+AGG + chr5_2:9031314-9031333 None:intergenic 35.0%
!! TTTTGATCTTTAAGAGTGCG+AGG + chr5_2:9031524-9031543 None:intergenic 35.0%
ATTGAAGATGCACCCAATTT+AGG - chr5_2:9031543-9031562 Msa0755250:CDS 35.0%
TTGAAGATGCACCCAATTTA+GGG - chr5_2:9031544-9031563 Msa0755250:CDS 35.0%
! TTAGCAGAAGAAAGTGTGAA+TGG + chr5_2:9031582-9031601 None:intergenic 35.0%
TGCTATAGATATATTGCCGT+TGG - chr5_2:9031656-9031675 Msa0755250:intron 35.0%
!! CCGTTGGTTTCTTTATAAGA+TGG - chr5_2:9031672-9031691 Msa0755250:intron 35.0%
TCTAGACTATATGGCCATAA+AGG + chr5_2:9031718-9031737 None:intergenic 35.0%
AACTTCAAAGCAAGTAAGGT+AGG - chr5_2:9031778-9031797 Msa0755250:CDS 35.0%
!! GTTCCCTTTGGAATAAAGTA+TGG + chr5_2:9031816-9031835 None:intergenic 35.0%
GATTTCAAGAAAGTTCCCTT+TGG + chr5_2:9031828-9031847 None:intergenic 35.0%
AATCAACTCATGTCATGAAC+CGG + chr5_2:9031893-9031912 None:intergenic 35.0%
CTGACACAACATGAAAGTAA+TGG + chr5_2:9031962-9031981 None:intergenic 35.0%
!! CGAAAAGCATAATAGTGGAT+TGG + chr5_2:9032064-9032083 None:intergenic 35.0%
! TTTTCGTGAAATGCTTCAAG+AGG - chr5_2:9032078-9032097 Msa0755250:CDS 35.0%
AAGATAAGGAAGCCATGTTT+CGG - chr5_2:9032364-9032383 Msa0755250:intron 35.0%
ATCTAGATAGTCCATCATCA+AGG + chr5_2:9032462-9032481 None:intergenic 35.0%
! TAAATGGCCTTGATAAAGTG+AGG - chr5_2:9032506-9032525 Msa0755250:intron 35.0%
TCCATTTCCTCACTTTATCA+AGG + chr5_2:9032516-9032535 None:intergenic 35.0%
GAACTCATTCTCTCAAAACT+TGG - chr5_2:9032592-9032611 Msa0755250:intron 35.0%
TGTTCTTATTCTGCTTCTGA+CGG - chr5_2:9032775-9032794 Msa0755250:intron 35.0%
TAATCCTTTATCAGAAAGGC+AGG + chr5_2:9032916-9032935 None:intergenic 35.0%
! TTTTGAATTACTAGTGCGAC+CGG - chr5_2:9032996-9033015 Msa0755250:intron 35.0%
! CCTGTATAATTTTGTTGCAG+GGG - chr5_2:9033073-9033092 Msa0755250:intron 35.0%
! CTGTATAATTTTGTTGCAGG+GGG - chr5_2:9033074-9033093 Msa0755250:intron 35.0%
AATGTGATAGTTGGCAATGA+AGG - chr5_2:9033173-9033192 Msa0755250:five_prime_UTR 35.0%
TCACATGTATTGCAATTCCT+TGG + chr5_2:9033205-9033224 None:intergenic 35.0%
GTAAAAGAATAAGTGGGTGG+CGG - chr5_2:9031218-9031237 Msa0755250:three_prime_UTR 40.0%
TTACCTTTCGACGGAATTCT+CGG + chr5_2:9031368-9031387 None:intergenic 40.0%
TCACTGCAGATCCCTAAATT+GGG + chr5_2:9031558-9031577 None:intergenic 40.0%
TTCACTGCAGATCCCTAAAT+TGG + chr5_2:9031559-9031578 None:intergenic 40.0%
TATAAGATGGCATTCGTTCG+AGG - chr5_2:9031685-9031704 Msa0755250:intron 40.0%
TTCGAGGCATAGAACCTTTA+TGG - chr5_2:9031701-9031720 Msa0755250:intron 40.0%
GGACAGAACTCTAGACTATA+TGG + chr5_2:9031727-9031746 None:intergenic 40.0%
TGCTTCAATTGGAGCAAGTT+TGG + chr5_2:9032002-9032021 None:intergenic 40.0%
TCAAACAGCACTGCTTCAAT+TGG + chr5_2:9032013-9032032 None:intergenic 40.0%
!! GCAGTGCTGTTTGATATAGA+CGG - chr5_2:9032019-9032038 Msa0755250:intron 40.0%
!! AATGTTGGTGGTTGTCAGAT+TGG - chr5_2:9032219-9032238 Msa0755250:intron 40.0%
!! GGTTGTCAGATTGGTTTCAA+TGG - chr5_2:9032228-9032247 Msa0755250:intron 40.0%
!! TGTCAGATTGGTTTCAATGG+AGG - chr5_2:9032231-9032250 Msa0755250:intron 40.0%
TGGAGGTAATCCTATAACAG+AGG - chr5_2:9032248-9032267 Msa0755250:intron 40.0%
!!! TTTTTTATTGCGACCGTTGC+TGG - chr5_2:9032273-9032292 Msa0755250:intron 40.0%
AGCACAATGGGGATATAGTT+CGG + chr5_2:9032413-9032432 None:intergenic 40.0%
GCCTTGATAAAGTGAGGAAA+TGG - chr5_2:9032512-9032531 Msa0755250:intron 40.0%
!! AGGAAATGGATTGAAGATCG+TGG - chr5_2:9032526-9032545 Msa0755250:intron 40.0%
ATGAGTTCTGCATTTGGTCT+TGG + chr5_2:9032580-9032599 None:intergenic 40.0%
GAGAGAATGAGTTCTGCATT+TGG + chr5_2:9032586-9032605 None:intergenic 40.0%
! GCTTCAAGACCTTTCAAGTA+GGG + chr5_2:9032685-9032704 None:intergenic 40.0%
! AGCTTCAAGACCTTTCAAGT+AGG + chr5_2:9032686-9032705 None:intergenic 40.0%
! TGAAGCTCTCAAAGCATCTA+AGG - chr5_2:9032699-9032718 Msa0755250:intron 40.0%
TCTGTTTCAGGAATCAAAGC+AGG - chr5_2:9032820-9032839 Msa0755250:intron 40.0%
CGGGTAGATATACCAATAAC+AGG + chr5_2:9032862-9032881 None:intergenic 40.0%
TCAGTAAATCCTCTGGGTTT+CGG + chr5_2:9032882-9032901 None:intergenic 40.0%
AAACCCAGAGGATTTACTGA+TGG - chr5_2:9032882-9032901 Msa0755250:intron 40.0%
AACCCAGAGGATTTACTGAT+GGG - chr5_2:9032883-9032902 Msa0755250:intron 40.0%
AAAGCCTGCCTTTCTGATAA+AGG - chr5_2:9032909-9032928 Msa0755250:intron 40.0%
TTGGAAGAACTTGACAAGTC+CGG - chr5_2:9032961-9032980 Msa0755250:intron 40.0%
CCCCTGCAACAAAATTATAC+AGG + chr5_2:9033076-9033095 None:intergenic 40.0%
AATACATGTGAGAGAGAGTG+AGG - chr5_2:9033214-9033233 Msa0755250:five_prime_UTR 40.0%
ATACATGTGAGAGAGAGTGA+GGG - chr5_2:9033215-9033234 Msa0755250:five_prime_UTR 40.0%
GTAAAAGAATAAGTGGGTGG+CGG - chr5_2:9031218-9031237 Msa0755250:three_prime_UTR 40.0%
TTACCTTTCGACGGAATTCT+CGG + chr5_2:9031368-9031387 None:intergenic 40.0%
TCACTGCAGATCCCTAAATT+GGG + chr5_2:9031558-9031577 None:intergenic 40.0%
TTCACTGCAGATCCCTAAAT+TGG + chr5_2:9031559-9031578 None:intergenic 40.0%
TATAAGATGGCATTCGTTCG+AGG - chr5_2:9031685-9031704 Msa0755250:intron 40.0%
TTCGAGGCATAGAACCTTTA+TGG - chr5_2:9031701-9031720 Msa0755250:intron 40.0%
GGACAGAACTCTAGACTATA+TGG + chr5_2:9031727-9031746 None:intergenic 40.0%
TGCTTCAATTGGAGCAAGTT+TGG + chr5_2:9032002-9032021 None:intergenic 40.0%
TCAAACAGCACTGCTTCAAT+TGG + chr5_2:9032013-9032032 None:intergenic 40.0%
!! GCAGTGCTGTTTGATATAGA+CGG - chr5_2:9032019-9032038 Msa0755250:intron 40.0%
!! AATGTTGGTGGTTGTCAGAT+TGG - chr5_2:9032219-9032238 Msa0755250:intron 40.0%
!! GGTTGTCAGATTGGTTTCAA+TGG - chr5_2:9032228-9032247 Msa0755250:intron 40.0%
!! TGTCAGATTGGTTTCAATGG+AGG - chr5_2:9032231-9032250 Msa0755250:intron 40.0%
TGGAGGTAATCCTATAACAG+AGG - chr5_2:9032248-9032267 Msa0755250:intron 40.0%
!!! TTTTTTATTGCGACCGTTGC+TGG - chr5_2:9032273-9032292 Msa0755250:intron 40.0%
AGCACAATGGGGATATAGTT+CGG + chr5_2:9032413-9032432 None:intergenic 40.0%
GCCTTGATAAAGTGAGGAAA+TGG - chr5_2:9032512-9032531 Msa0755250:intron 40.0%
!! AGGAAATGGATTGAAGATCG+TGG - chr5_2:9032526-9032545 Msa0755250:intron 40.0%
ATGAGTTCTGCATTTGGTCT+TGG + chr5_2:9032580-9032599 None:intergenic 40.0%
GAGAGAATGAGTTCTGCATT+TGG + chr5_2:9032586-9032605 None:intergenic 40.0%
! GCTTCAAGACCTTTCAAGTA+GGG + chr5_2:9032685-9032704 None:intergenic 40.0%
! AGCTTCAAGACCTTTCAAGT+AGG + chr5_2:9032686-9032705 None:intergenic 40.0%
! TGAAGCTCTCAAAGCATCTA+AGG - chr5_2:9032699-9032718 Msa0755250:intron 40.0%
TCTGTTTCAGGAATCAAAGC+AGG - chr5_2:9032820-9032839 Msa0755250:intron 40.0%
CGGGTAGATATACCAATAAC+AGG + chr5_2:9032862-9032881 None:intergenic 40.0%
TCAGTAAATCCTCTGGGTTT+CGG + chr5_2:9032882-9032901 None:intergenic 40.0%
AAACCCAGAGGATTTACTGA+TGG - chr5_2:9032882-9032901 Msa0755250:intron 40.0%
AACCCAGAGGATTTACTGAT+GGG - chr5_2:9032883-9032902 Msa0755250:intron 40.0%
AAAGCCTGCCTTTCTGATAA+AGG - chr5_2:9032909-9032928 Msa0755250:intron 40.0%
TTGGAAGAACTTGACAAGTC+CGG - chr5_2:9032961-9032980 Msa0755250:intron 40.0%
CCCCTGCAACAAAATTATAC+AGG + chr5_2:9033076-9033095 None:intergenic 40.0%
AATACATGTGAGAGAGAGTG+AGG - chr5_2:9033214-9033233 Msa0755250:five_prime_UTR 40.0%
ATACATGTGAGAGAGAGTGA+GGG - chr5_2:9033215-9033234 Msa0755250:five_prime_UTR 40.0%
! CCATAGTTTAGCTTCGTGTG+TGG + chr5_2:9031339-9031358 None:intergenic 45.0%
CCACACACGAAGCTAAACTA+TGG - chr5_2:9031336-9031355 Msa0755250:three_prime_UTR 45.0%
!! AAGGAAGCGTTACCTTTCGA+CGG + chr5_2:9031377-9031396 None:intergenic 45.0%
ATCATTGTGCTTGCCAGCAA+CGG + chr5_2:9032289-9032308 None:intergenic 45.0%
GCACAATGATGACATTGCCT+TGG - chr5_2:9032299-9032318 Msa0755250:intron 45.0%
ATAAGGAAGCCATGTTTCGG+AGG - chr5_2:9032367-9032386 Msa0755250:CDS 45.0%
TAGGGTTTACCTCCGAAACA+TGG + chr5_2:9032379-9032398 None:intergenic 45.0%
ACAATGGGGATATAGTTCGG+GGG + chr5_2:9032410-9032429 None:intergenic 45.0%
CACAATGGGGATATAGTTCG+GGG + chr5_2:9032411-9032430 None:intergenic 45.0%
GCACAATGGGGATATAGTTC+GGG + chr5_2:9032412-9032431 None:intergenic 45.0%
GAGCAACTGAAGCCGTTAAA+TGG - chr5_2:9032490-9032509 Msa0755250:intron 45.0%
!! TGCATTTGGTCTTGGAGCAT+TGG + chr5_2:9032572-9032591 None:intergenic 45.0%
!! TTCAAGTAGGGTTCTGGATG+AGG + chr5_2:9032673-9032692 None:intergenic 45.0%
CATCCAGAACCCTACTTGAA+AGG - chr5_2:9032673-9032692 Msa0755250:intron 45.0%
! AGACCTTTCAAGTAGGGTTC+TGG + chr5_2:9032679-9032698 None:intergenic 45.0%
GAATCCTGCAACGACAAAAC+AGG + chr5_2:9032802-9032821 None:intergenic 45.0%
TCGTTGCAGGATTCTGTTTC+AGG - chr5_2:9032808-9032827 Msa0755250:intron 45.0%
TATATCTACCCGAAACCCAG+AGG - chr5_2:9032870-9032889 Msa0755250:intron 45.0%
CAGTAAATCCTCTGGGTTTC+GGG + chr5_2:9032881-9032900 None:intergenic 45.0%
CTCCCATCAGTAAATCCTCT+GGG + chr5_2:9032888-9032907 None:intergenic 45.0%
TCCAAAATTGTGGGCAGCAT+TGG - chr5_2:9032942-9032961 Msa0755250:intron 45.0%
! TCCAATGCTGCCCACAATTT+TGG + chr5_2:9032946-9032965 None:intergenic 45.0%
! CCATAGTTTAGCTTCGTGTG+TGG + chr5_2:9031339-9031358 None:intergenic 45.0%
CCACACACGAAGCTAAACTA+TGG - chr5_2:9031336-9031355 Msa0755250:three_prime_UTR 45.0%
!! AAGGAAGCGTTACCTTTCGA+CGG + chr5_2:9031377-9031396 None:intergenic 45.0%
ATCATTGTGCTTGCCAGCAA+CGG + chr5_2:9032289-9032308 None:intergenic 45.0%
GCACAATGATGACATTGCCT+TGG - chr5_2:9032299-9032318 Msa0755250:intron 45.0%
ATAAGGAAGCCATGTTTCGG+AGG - chr5_2:9032367-9032386 Msa0755250:CDS 45.0%
TAGGGTTTACCTCCGAAACA+TGG + chr5_2:9032379-9032398 None:intergenic 45.0%
ACAATGGGGATATAGTTCGG+GGG + chr5_2:9032410-9032429 None:intergenic 45.0%
CACAATGGGGATATAGTTCG+GGG + chr5_2:9032411-9032430 None:intergenic 45.0%
GCACAATGGGGATATAGTTC+GGG + chr5_2:9032412-9032431 None:intergenic 45.0%
GAGCAACTGAAGCCGTTAAA+TGG - chr5_2:9032490-9032509 Msa0755250:intron 45.0%
!! TGCATTTGGTCTTGGAGCAT+TGG + chr5_2:9032572-9032591 None:intergenic 45.0%
!! TTCAAGTAGGGTTCTGGATG+AGG + chr5_2:9032673-9032692 None:intergenic 45.0%
CATCCAGAACCCTACTTGAA+AGG - chr5_2:9032673-9032692 Msa0755250:intron 45.0%
! AGACCTTTCAAGTAGGGTTC+TGG + chr5_2:9032679-9032698 None:intergenic 45.0%
GAATCCTGCAACGACAAAAC+AGG + chr5_2:9032802-9032821 None:intergenic 45.0%
TCGTTGCAGGATTCTGTTTC+AGG - chr5_2:9032808-9032827 Msa0755250:intron 45.0%
TATATCTACCCGAAACCCAG+AGG - chr5_2:9032870-9032889 Msa0755250:intron 45.0%
CAGTAAATCCTCTGGGTTTC+GGG + chr5_2:9032881-9032900 None:intergenic 45.0%
CTCCCATCAGTAAATCCTCT+GGG + chr5_2:9032888-9032907 None:intergenic 45.0%
TCCAAAATTGTGGGCAGCAT+TGG - chr5_2:9032942-9032961 Msa0755250:intron 45.0%
! TCCAATGCTGCCCACAATTT+TGG + chr5_2:9032946-9032965 None:intergenic 45.0%
!! TTTATTGAATTATTATAAAT+TGG - chr5_2:9032154-9032173 Msa0755250:CDS 5.0%
!! TTTATTGAATTATTATAAAT+TGG - chr5_2:9032154-9032173 Msa0755250:CDS 5.0%
CTTCCGAGAATTCCGTCGAA+AGG - chr5_2:9031362-9031381 Msa0755250:three_prime_UTR 50.0%
ATTGCCTTGGATCTCTTCCC+TGG - chr5_2:9032312-9032331 Msa0755250:intron 50.0%
ATCACCAGGGAAGAGATCCA+AGG + chr5_2:9032319-9032338 None:intergenic 50.0%
TGGATCTCTTCCCTGGTGAT+CGG - chr5_2:9032319-9032338 Msa0755250:intron 50.0%
CAATGGGGATATAGTTCGGG+GGG + chr5_2:9032409-9032428 None:intergenic 50.0%
GCTCCCATCAGTAAATCCTC+TGG + chr5_2:9032889-9032908 None:intergenic 50.0%
GTGCGACCGGCATAATTTCT+TGG - chr5_2:9033009-9033028 Msa0755250:intron 50.0%
GGCAATGAAGGTCAATGCCA+AGG - chr5_2:9033185-9033204 Msa0755250:five_prime_UTR 50.0%
CTTCCGAGAATTCCGTCGAA+AGG - chr5_2:9031362-9031381 Msa0755250:three_prime_UTR 50.0%
ATTGCCTTGGATCTCTTCCC+TGG - chr5_2:9032312-9032331 Msa0755250:intron 50.0%
ATCACCAGGGAAGAGATCCA+AGG + chr5_2:9032319-9032338 None:intergenic 50.0%
TGGATCTCTTCCCTGGTGAT+CGG - chr5_2:9032319-9032338 Msa0755250:intron 50.0%
CAATGGGGATATAGTTCGGG+GGG + chr5_2:9032409-9032428 None:intergenic 50.0%
GCTCCCATCAGTAAATCCTC+TGG + chr5_2:9032889-9032908 None:intergenic 50.0%
GTGCGACCGGCATAATTTCT+TGG - chr5_2:9033009-9033028 Msa0755250:intron 50.0%
GGCAATGAAGGTCAATGCCA+AGG - chr5_2:9033185-9033204 Msa0755250:five_prime_UTR 50.0%
! TAAGTGGGTGGCGGCATATG+CGG - chr5_2:9031227-9031246 Msa0755250:three_prime_UTR 55.0%
!! TTGGCGGATTCCATTCGTCG+TGG - chr5_2:9031267-9031286 Msa0755250:three_prime_UTR 55.0%
GGATCTCTTCCCTGGTGATC+GGG - chr5_2:9032320-9032339 Msa0755250:intron 55.0%
AACCTCGTTCCCGATCACCA+GGG + chr5_2:9032332-9032351 None:intergenic 55.0%
AAACCTCGTTCCCGATCACC+AGG + chr5_2:9032333-9032352 None:intergenic 55.0%
!! GTAGGGTTCTGGATGAGGCT+TGG + chr5_2:9032668-9032687 None:intergenic 55.0%
! CGGACCTGTTTTGTCGTTGC+AGG - chr5_2:9032795-9032814 Msa0755250:intron 55.0%
ATCAAAGCAGGAGTCGCTGC+TGG - chr5_2:9032832-9032851 Msa0755250:intron 55.0%
TCAAAGCAGGAGTCGCTGCT+GGG - chr5_2:9032833-9032852 Msa0755250:intron 55.0%
GCTGCTGGGATGCCTGTTAT+TGG - chr5_2:9032847-9032866 Msa0755250:intron 55.0%
CATGTGAGAGAGAGTGAGGG+AGG - chr5_2:9033218-9033237 Msa0755250:five_prime_UTR 55.0%
TGAGAGAGAGTGAGGGAGGA+AGG - chr5_2:9033222-9033241 Msa0755250:five_prime_UTR 55.0%
GAGAGAGAGTGAGGGAGGAA+GGG - chr5_2:9033223-9033242 Msa0755250:five_prime_UTR 55.0%
! TAAGTGGGTGGCGGCATATG+CGG - chr5_2:9031227-9031246 Msa0755250:three_prime_UTR 55.0%
!! TTGGCGGATTCCATTCGTCG+TGG - chr5_2:9031267-9031286 Msa0755250:three_prime_UTR 55.0%
GGATCTCTTCCCTGGTGATC+GGG - chr5_2:9032320-9032339 Msa0755250:intron 55.0%
AACCTCGTTCCCGATCACCA+GGG + chr5_2:9032332-9032351 None:intergenic 55.0%
AAACCTCGTTCCCGATCACC+AGG + chr5_2:9032333-9032352 None:intergenic 55.0%
!! GTAGGGTTCTGGATGAGGCT+TGG + chr5_2:9032668-9032687 None:intergenic 55.0%
! CGGACCTGTTTTGTCGTTGC+AGG - chr5_2:9032795-9032814 Msa0755250:intron 55.0%
ATCAAAGCAGGAGTCGCTGC+TGG - chr5_2:9032832-9032851 Msa0755250:intron 55.0%
TCAAAGCAGGAGTCGCTGCT+GGG - chr5_2:9032833-9032852 Msa0755250:intron 55.0%
GCTGCTGGGATGCCTGTTAT+TGG - chr5_2:9032847-9032866 Msa0755250:intron 55.0%
CATGTGAGAGAGAGTGAGGG+AGG - chr5_2:9033218-9033237 Msa0755250:five_prime_UTR 55.0%
TGAGAGAGAGTGAGGGAGGA+AGG - chr5_2:9033222-9033241 Msa0755250:five_prime_UTR 55.0%
GAGAGAGAGTGAGGGAGGAA+GGG - chr5_2:9033223-9033242 Msa0755250:five_prime_UTR 55.0%
TTCCCTGGTGATCGGGAACG+AGG - chr5_2:9032327-9032346 Msa0755250:intron 60.0%
AGTTCGGGGGGAGGTGAGTA+GGG + chr5_2:9032397-9032416 None:intergenic 60.0%
TAGTTCGGGGGGAGGTGAGT+AGG + chr5_2:9032398-9032417 None:intergenic 60.0%
TGGGGATATAGTTCGGGGGG+AGG + chr5_2:9032406-9032425 None:intergenic 60.0%
AGAGAGTGAGGGAGGAAGGG+AGG - chr5_2:9033226-9033245 Msa0755250:five_prime_UTR 60.0%
GAGAGTGAGGGAGGAAGGGA+GGG - chr5_2:9033227-9033246 Msa0755250:five_prime_UTR 60.0%
TTCCCTGGTGATCGGGAACG+AGG - chr5_2:9032327-9032346 Msa0755250:intron 60.0%
AGTTCGGGGGGAGGTGAGTA+GGG + chr5_2:9032397-9032416 None:intergenic 60.0%
TAGTTCGGGGGGAGGTGAGT+AGG + chr5_2:9032398-9032417 None:intergenic 60.0%
TGGGGATATAGTTCGGGGGG+AGG + chr5_2:9032406-9032425 None:intergenic 60.0%
AGAGAGTGAGGGAGGAAGGG+AGG - chr5_2:9033226-9033245 Msa0755250:five_prime_UTR 60.0%
GAGAGTGAGGGAGGAAGGGA+GGG - chr5_2:9033227-9033246 Msa0755250:five_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 9031162 9033304 9031162 ID=Msa0755250;Name=Msa0755250
chr5_2 mRNA 9031162 9033304 9031162 ID=Msa0755250-mRNA-1;Parent=Msa0755250;Name=Msa0755250-mRNA-1;_AED=0.05;_eAED=0.05;_QI=193|0.75|0.8|1|1|1|5|311|245
chr5_2 exon 9031162 9031649 9031162 ID=Msa0755250-mRNA-1:exon:4187;Parent=Msa0755250-mRNA-1
chr5_2 exon 9031725 9031986 9031725 ID=Msa0755250-mRNA-1:exon:4186;Parent=Msa0755250-mRNA-1
chr5_2 exon 9032078 9032229 9032078 ID=Msa0755250-mRNA-1:exon:4185;Parent=Msa0755250-mRNA-1
chr5_2 exon 9032367 9032484 9032367 ID=Msa0755250-mRNA-1:exon:4184;Parent=Msa0755250-mRNA-1
chr5_2 exon 9033083 9033304 9033083 ID=Msa0755250-mRNA-1:exon:4183;Parent=Msa0755250-mRNA-1
chr5_2 five_prime_UTR 9033112 9033304 9033112 ID=Msa0755250-mRNA-1:five_prime_utr;Parent=Msa0755250-mRNA-1
chr5_2 CDS 9033083 9033111 9033083 ID=Msa0755250-mRNA-1:cds;Parent=Msa0755250-mRNA-1
chr5_2 CDS 9032367 9032484 9032367 ID=Msa0755250-mRNA-1:cds;Parent=Msa0755250-mRNA-1
chr5_2 CDS 9032078 9032229 9032078 ID=Msa0755250-mRNA-1:cds;Parent=Msa0755250-mRNA-1
chr5_2 CDS 9031725 9031986 9031725 ID=Msa0755250-mRNA-1:cds;Parent=Msa0755250-mRNA-1
chr5_2 CDS 9031473 9031649 9031473 ID=Msa0755250-mRNA-1:cds;Parent=Msa0755250-mRNA-1
chr5_2 three_prime_UTR 9031162 9031472 9031162 ID=Msa0755250-mRNA-1:three_prime_utr;Parent=Msa0755250-mRNA-1
Gene Sequence

>Msa0755250

ATGGCTACTTCCGAGAATTCCGTCGAAAGCAGCAAGAGTTCTCTTACCAAACTTGCTCCAATTGAAGCAGTGCTGTTTGATATAGACGGAACTCTTTGTGATTCTGACCCAATCCACTATTATGCTTTTCGTGAAATGCTTCAAGAGATTGGTTTCAATGGAGGTAATCCTATAACAGAGGAATTTTTTATTGCGACCGTTGCTGGCAAGCACAATGATGACATTGCCTTGGATCTCTTCCCTGGTGATCGGGAACGAGGTTTAAAGTTTGTAGAAGATAAGGAAGCCATGTTTCGGAGATTAGCAGCTGAGCAACTGAAGCCGTTAAATGGCCTTGATAAAGTGAGGAAATGGATTGAAGATCGTGGATTGAAGCGAGCTGCAGTTACCAATGCTCCAAGACCAAATGCAGAACTCATTCTCTCAAAACTTGGTCTCTCAGATTTCTTTCATGCTGTTATTATTGGTGATGAATGTGAACATGCCAAGCCTCATCCAGAACCCTACTTGAAAGGTCTTGAAGCTCTCAAAGCATCTAAGGATCACACATTTATATTTGAGGATTCTGTTTCAGGAATCAAAGCAGGAGTCGCTGCTGGGATGCCTGTTATTGGTATATCTACCCGAAACCCAGAGGATTTACTGATGGGAGCAAAGCCTGCCTTTCTGATAAAGGATTATGATGATCCAAAATTGTGGGCAGCATTGGAAGAACTTGACAAGTCCGGTTCTCATTAA
Protein sequence

>Msa0755250

MATSENSVESSKSSLTKLAPIEAVLFDIDGTLCDSDPIHYYAFREMLQEIGFNGGNPITEEFFIATVAGKHNDDIALDLFPGDRERGLKFVEDKEAMFRRLAAEQLKPLNGLDKVRKWIEDRGLKRAAVTNAPRPNAELILSKLGLSDFFHAVIIGDECEHAKPHPEPYLKGLEALKASKDHTFIFEDSVSGIKAGVAAGMPVIGISTRNPEDLLMGAKPAFLIKDYDDPKLWAALEELDKSGSH*