Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0293000 | XP_013464447.1 | 99.541 | 218 | 1 | 0 | 1 | 218 | 204 | 421 | 4.78e-152 | 439 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0293000 | sp|Q8S948|SPS1_ARATH | 78.802 | 217 | 46 | 0 | 1 | 217 | 189 | 405 | 1.72e-122 | 356 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0293000 | A0A072V9K7 | 99.541 | 218 | 1 | 0 | 1 | 218 | 204 | 421 | 2.28e-152 | 439 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000220 | Msa0293000 | 0.802407 | 5.694217e-49 | -8.615850e-47 |
Msa0002060 | Msa0293000 | 0.821123 | 4.772703e-53 | -8.615850e-47 |
Msa0005160 | Msa0293000 | 0.805717 | 1.166416e-49 | -8.615850e-47 |
Msa0009210 | Msa0293000 | 0.804085 | 2.558821e-49 | -8.615850e-47 |
Msa0011540 | Msa0293000 | 0.803459 | 3.451258e-49 | -8.615850e-47 |
Msa0014960 | Msa0293000 | 0.809874 | 1.524759e-50 | -8.615850e-47 |
Msa0015720 | Msa0293000 | 0.823555 | 1.300853e-53 | -8.615850e-47 |
Msa0016110 | Msa0293000 | 0.830677 | 2.566909e-55 | -8.615850e-47 |
Msa0016160 | Msa0293000 | 0.830121 | 3.510832e-55 | -8.615850e-47 |
Msa0016830 | Msa0293000 | 0.843756 | 1.152303e-58 | -8.615850e-47 |
Msa0021710 | Msa0293000 | 0.811783 | 5.891210e-51 | -8.615850e-47 |
Msa0024240 | Msa0293000 | 0.804809 | 1.807374e-49 | -8.615850e-47 |
Msa0024320 | Msa0293000 | 0.813759 | 2.175649e-51 | -8.615850e-47 |
Msa0025340 | Msa0293000 | 0.808342 | 3.246611e-50 | -8.615850e-47 |
Msa0028410 | Msa0293000 | 0.814380 | 1.586997e-51 | -8.615850e-47 |
Msa0028450 | Msa0293000 | 0.813195 | 2.894885e-51 | -8.615850e-47 |
Msa0031650 | Msa0293000 | -0.801052 | 1.080035e-48 | -8.615850e-47 |
Msa0039920 | Msa0293000 | 0.816250 | 6.092732e-52 | -8.615850e-47 |
Msa0042210 | Msa0293000 | 0.833108 | 6.444899e-56 | -8.615850e-47 |
Msa0046700 | Msa0293000 | 0.834301 | 3.244913e-56 | -8.615850e-47 |
Msa0053210 | Msa0293000 | 0.819076 | 1.404237e-52 | -8.615850e-47 |
Msa0057740 | Msa0293000 | 0.805390 | 1.366348e-49 | -8.615850e-47 |
Msa0058970 | Msa0293000 | 0.805218 | 1.484573e-49 | -8.615850e-47 |
Msa0065190 | Msa0293000 | 0.844167 | 8.940651e-59 | -8.615850e-47 |
Msa0067820 | Msa0293000 | 0.801906 | 7.217972e-49 | -8.615850e-47 |
Msa0070580 | Msa0293000 | 0.801616 | 8.279954e-49 | -8.615850e-47 |
Msa0080620 | Msa0293000 | 0.810100 | 1.363256e-50 | -8.615850e-47 |
Msa0083570 | Msa0293000 | 0.801488 | 8.794341e-49 | -8.615850e-47 |
Msa0086620 | Msa0293000 | 0.800557 | 1.362821e-48 | -8.615850e-47 |
Msa0087580 | Msa0293000 | 0.824022 | 1.010709e-53 | -8.615850e-47 |
Msa0087780 | Msa0293000 | 0.815042 | 1.132209e-51 | -8.615850e-47 |
Msa0087790 | Msa0293000 | 0.815600 | 8.508130e-52 | -8.615850e-47 |
Msa0092750 | Msa0293000 | 0.817462 | 3.257409e-52 | -8.615850e-47 |
Msa0096830 | Msa0293000 | 0.822632 | 2.135331e-53 | -8.615850e-47 |
Msa0097970 | Msa0293000 | 0.816877 | 4.408286e-52 | -8.615850e-47 |
Msa0098700 | Msa0293000 | 0.811246 | 7.707711e-51 | -8.615850e-47 |
Msa0102290 | Msa0293000 | 0.838192 | 3.328117e-57 | -8.615850e-47 |
Msa0109870 | Msa0293000 | 0.837441 | 5.189691e-57 | -8.615850e-47 |
Msa0114960 | Msa0293000 | 0.800441 | 1.439317e-48 | -8.615850e-47 |
Msa0116950 | Msa0293000 | 0.829112 | 6.177456e-55 | -8.615850e-47 |
Msa0124070 | Msa0293000 | 0.822770 | 1.982714e-53 | -8.615850e-47 |
Msa0134300 | Msa0293000 | 0.823316 | 1.478916e-53 | -8.615850e-47 |
Msa0134380 | Msa0293000 | 0.805207 | 1.492256e-49 | -8.615850e-47 |
Msa0134390 | Msa0293000 | 0.809356 | 1.969939e-50 | -8.615850e-47 |
Msa0134420 | Msa0293000 | 0.805639 | 1.211500e-49 | -8.615850e-47 |
Msa0147070 | Msa0293000 | 0.811349 | 7.319576e-51 | -8.615850e-47 |
Msa0149070 | Msa0293000 | 0.822007 | 2.982492e-53 | -8.615850e-47 |
Msa0156260 | Msa0293000 | 0.846209 | 2.507528e-59 | -8.615850e-47 |
Msa0156780 | Msa0293000 | 0.811420 | 7.064310e-51 | -8.615850e-47 |
Msa0160470 | Msa0293000 | 0.835964 | 1.234555e-56 | -8.615850e-47 |
Msa0163400 | Msa0293000 | 0.817717 | 2.853610e-52 | -8.615850e-47 |
Msa0164790 | Msa0293000 | 0.820769 | 5.757701e-53 | -8.615850e-47 |
Msa0168470 | Msa0293000 | 0.852679 | 3.941663e-61 | -8.615850e-47 |
Msa0170550 | Msa0293000 | 0.814761 | 1.306496e-51 | -8.615850e-47 |
Msa0171740 | Msa0293000 | -0.801279 | 9.704784e-49 | -8.615850e-47 |
Msa0175900 | Msa0293000 | 0.823986 | 1.030935e-53 | -8.615850e-47 |
Msa0180590 | Msa0293000 | 0.812805 | 3.524738e-51 | -8.615850e-47 |
Msa0180600 | Msa0293000 | 0.821281 | 4.388533e-53 | -8.615850e-47 |
Msa0180780 | Msa0293000 | 0.813096 | 3.043168e-51 | -8.615850e-47 |
Msa0182610 | Msa0293000 | 0.813089 | 3.053826e-51 | -8.615850e-47 |
Msa0186510 | Msa0293000 | 0.820775 | 5.738539e-53 | -8.615850e-47 |
Msa0186750 | Msa0293000 | 0.842671 | 2.242536e-58 | -8.615850e-47 |
Msa0190000 | Msa0293000 | 0.802901 | 4.502288e-49 | -8.615850e-47 |
Msa0196620 | Msa0293000 | 0.806589 | 7.645048e-50 | -8.615850e-47 |
Msa0202630 | Msa0293000 | 0.819128 | 1.366809e-52 | -8.615850e-47 |
Msa0213590 | Msa0293000 | 0.821999 | 2.994104e-53 | -8.615850e-47 |
Msa0216010 | Msa0293000 | 0.805949 | 1.042907e-49 | -8.615850e-47 |
Msa0224180 | Msa0293000 | 0.803958 | 2.718965e-49 | -8.615850e-47 |
Msa0228320 | Msa0293000 | 0.829162 | 6.006124e-55 | -8.615850e-47 |
Msa0231180 | Msa0293000 | 0.809957 | 1.463863e-50 | -8.615850e-47 |
Msa0243160 | Msa0293000 | 0.810647 | 1.038953e-50 | -8.615850e-47 |
Msa0253320 | Msa0293000 | 0.812002 | 5.278119e-51 | -8.615850e-47 |
Msa0260930 | Msa0293000 | 0.808089 | 3.675482e-50 | -8.615850e-47 |
Msa0266100 | Msa0293000 | 0.800036 | 1.739656e-48 | -8.615850e-47 |
Msa0274690 | Msa0293000 | 0.815227 | 1.029785e-51 | -8.615850e-47 |
Msa0284260 | Msa0293000 | 0.816868 | 4.429390e-52 | -8.615850e-47 |
Msa0284980 | Msa0293000 | 0.818002 | 2.460548e-52 | -8.615850e-47 |
Msa0292300 | Msa0293000 | 0.806023 | 1.005861e-49 | -8.615850e-47 |
Msa0293000 | Msa0293060 | 0.816409 | 5.614040e-52 | -8.615850e-47 |
Msa0293000 | Msa0296100 | 0.803127 | 4.042863e-49 | -8.615850e-47 |
Msa0293000 | Msa0297860 | 0.803540 | 3.320733e-49 | -8.615850e-47 |
Msa0293000 | Msa0304870 | 0.810978 | 8.809211e-51 | -8.615850e-47 |
Msa0293000 | Msa0322480 | 0.833457 | 5.273627e-56 | -8.615850e-47 |
Msa0293000 | Msa0331060 | 0.881960 | 1.553901e-70 | -8.615850e-47 |
Msa0293000 | Msa0335860 | 0.826348 | 2.849336e-54 | -8.615850e-47 |
Msa0293000 | Msa0341260 | 0.810520 | 1.106873e-50 | -8.615850e-47 |
Msa0293000 | Msa0355590 | 0.825527 | 4.466573e-54 | -8.615850e-47 |
Msa0293000 | Msa0355990 | 0.808899 | 2.469152e-50 | -8.615850e-47 |
Msa0293000 | Msa0372550 | 0.832700 | 8.139457e-56 | -8.615850e-47 |
Msa0293000 | Msa0375100 | 0.810527 | 1.102721e-50 | -8.615850e-47 |
Msa0293000 | Msa0375430 | 0.807174 | 5.750502e-50 | -8.615850e-47 |
Msa0293000 | Msa0377460 | 0.855860 | 4.750997e-62 | -8.615850e-47 |
Msa0293000 | Msa0378000 | 0.816536 | 5.257698e-52 | -8.615850e-47 |
Msa0293000 | Msa0390760 | 0.804442 | 2.156425e-49 | -8.615850e-47 |
Msa0293000 | Msa0400880 | 0.812913 | 3.336586e-51 | -8.615850e-47 |
Msa0293000 | Msa0403670 | 0.806033 | 1.001356e-49 | -8.615850e-47 |
Msa0293000 | Msa0404530 | 0.803781 | 2.958617e-49 | -8.615850e-47 |
Msa0293000 | Msa0404880 | 0.812863 | 3.422213e-51 | -8.615850e-47 |
Msa0293000 | Msa0405040 | 0.801752 | 7.761973e-49 | -8.615850e-47 |
Msa0293000 | Msa0417000 | 0.817358 | 3.436589e-52 | -8.615850e-47 |
Msa0293000 | Msa0420280 | 0.802110 | 6.553439e-49 | -8.615850e-47 |
Msa0293000 | Msa0424940 | 0.821853 | 3.236672e-53 | -8.615850e-47 |
Msa0293000 | Msa0426860 | 0.864435 | 1.218847e-64 | -8.615850e-47 |
Msa0293000 | Msa0426890 | 0.865656 | 5.039748e-65 | -8.615850e-47 |
Msa0293000 | Msa0428280 | 0.800896 | 1.162347e-48 | -8.615850e-47 |
Msa0293000 | Msa0430040 | 0.805955 | 1.039543e-49 | -8.615850e-47 |
Msa0293000 | Msa0433270 | 0.818720 | 1.692002e-52 | -8.615850e-47 |
Msa0293000 | Msa0439940 | 0.810219 | 1.285353e-50 | -8.615850e-47 |
Msa0293000 | Msa0440720 | 0.800944 | 1.136230e-48 | -8.615850e-47 |
Msa0293000 | Msa0443250 | 0.801281 | 9.694108e-49 | -8.615850e-47 |
Msa0293000 | Msa0444340 | 0.815303 | 9.906816e-52 | -8.615850e-47 |
Msa0293000 | Msa0449030 | 0.829017 | 6.510713e-55 | -8.615850e-47 |
Msa0293000 | Msa0450390 | 0.812693 | 3.728090e-51 | -8.615850e-47 |
Msa0293000 | Msa0462530 | 0.805022 | 1.631395e-49 | -8.615850e-47 |
Msa0293000 | Msa0463540 | 0.818653 | 1.751923e-52 | -8.615850e-47 |
Msa0293000 | Msa0463820 | 0.813666 | 2.280858e-51 | -8.615850e-47 |
Msa0293000 | Msa0466830 | 0.813222 | 2.854626e-51 | -8.615850e-47 |
Msa0293000 | Msa0469840 | 0.818342 | 2.061254e-52 | -8.615850e-47 |
Msa0293000 | Msa0473320 | 0.834788 | 2.447563e-56 | -8.615850e-47 |
Msa0293000 | Msa0476140 | 0.807416 | 5.109320e-50 | -8.615850e-47 |
Msa0293000 | Msa0484590 | 0.807211 | 5.647091e-50 | -8.615850e-47 |
Msa0293000 | Msa0490200 | 0.852014 | 6.095622e-61 | -8.615850e-47 |
Msa0293000 | Msa0490740 | 0.833037 | 6.710656e-56 | -8.615850e-47 |
Msa0293000 | Msa0497060 | 0.827087 | 1.898304e-54 | -8.615850e-47 |
Msa0293000 | Msa0508660 | 0.801948 | 7.077347e-49 | -8.615850e-47 |
Msa0293000 | Msa0511600 | 0.832423 | 9.534446e-56 | -8.615850e-47 |
Msa0293000 | Msa0512930 | 0.820468 | 6.752582e-53 | -8.615850e-47 |
Msa0293000 | Msa0513660 | 0.809962 | 1.460212e-50 | -8.615850e-47 |
Msa0293000 | Msa0514630 | 0.817261 | 3.613695e-52 | -8.615850e-47 |
Msa0293000 | Msa0515420 | 0.812580 | 3.947606e-51 | -8.615850e-47 |
Msa0293000 | Msa0516340 | 0.817827 | 2.694693e-52 | -8.615850e-47 |
Msa0293000 | Msa0517400 | 0.849695 | 2.741569e-60 | -8.615850e-47 |
Msa0293000 | Msa0538140 | 0.811744 | 6.006472e-51 | -8.615850e-47 |
Msa0293000 | Msa0546020 | 0.806201 | 9.228472e-50 | -8.615850e-47 |
Msa0293000 | Msa0549330 | 0.802563 | 5.286623e-49 | -8.615850e-47 |
Msa0293000 | Msa0552670 | 0.818315 | 2.089470e-52 | -8.615850e-47 |
Msa0293000 | Msa0558800 | 0.801331 | 9.471340e-49 | -8.615850e-47 |
Msa0293000 | Msa0562040 | 0.841441 | 4.743623e-58 | -8.615850e-47 |
Msa0293000 | Msa0574230 | 0.811194 | 7.908646e-51 | -8.615850e-47 |
Msa0293000 | Msa0574450 | 0.804139 | 2.493411e-49 | -8.615850e-47 |
Msa0293000 | Msa0577110 | 0.807474 | 4.966122e-50 | -8.615850e-47 |
Msa0293000 | Msa0577910 | 0.820671 | 6.063369e-53 | -8.615850e-47 |
Msa0293000 | Msa0577920 | 0.800055 | 1.724774e-48 | -8.615850e-47 |
Msa0293000 | Msa0581240 | 0.804115 | 2.521843e-49 | -8.615850e-47 |
Msa0293000 | Msa0595780 | 0.800017 | 1.755722e-48 | -8.615850e-47 |
Msa0293000 | Msa0598080 | 0.825297 | 5.062596e-54 | -8.615850e-47 |
Msa0293000 | Msa0600280 | 0.810362 | 1.196767e-50 | -8.615850e-47 |
Msa0293000 | Msa0606230 | 0.815413 | 9.361694e-52 | -8.615850e-47 |
Msa0293000 | Msa0606680 | 0.803997 | 2.668085e-49 | -8.615850e-47 |
Msa0293000 | Msa0612090 | 0.808076 | 3.698908e-50 | -8.615850e-47 |
Msa0293000 | Msa0616570 | 0.814591 | 1.425039e-51 | -8.615850e-47 |
Msa0293000 | Msa0617010 | 0.815884 | 7.353195e-52 | -8.615850e-47 |
Msa0293000 | Msa0619450 | 0.801682 | 8.024774e-49 | -8.615850e-47 |
Msa0293000 | Msa0619480 | 0.816063 | 6.706991e-52 | -8.615850e-47 |
Msa0293000 | Msa0619530 | 0.815256 | 1.014572e-51 | -8.615850e-47 |
Msa0293000 | Msa0624220 | 0.819723 | 1.000055e-52 | -8.615850e-47 |
Msa0293000 | Msa0624240 | 0.834625 | 2.689992e-56 | -8.615850e-47 |
Msa0293000 | Msa0624260 | 0.857868 | 1.216810e-62 | -8.615850e-47 |
Msa0293000 | Msa0624360 | 0.848181 | 7.219726e-60 | -8.615850e-47 |
Msa0293000 | Msa0625510 | 0.823822 | 1.126215e-53 | -8.615850e-47 |
Msa0293000 | Msa0626900 | 0.804782 | 1.830904e-49 | -8.615850e-47 |
Msa0293000 | Msa0640780 | 0.814094 | 1.835118e-51 | -8.615850e-47 |
Msa0293000 | Msa0655980 | 0.807680 | 4.489945e-50 | -8.615850e-47 |
Msa0293000 | Msa0659580 | 0.801993 | 6.927124e-49 | -8.615850e-47 |
Msa0293000 | Msa0659640 | 0.825800 | 3.846593e-54 | -8.615850e-47 |
Msa0293000 | Msa0667680 | 0.813724 | 2.214849e-51 | -8.615850e-47 |
Msa0293000 | Msa0667710 | 0.801135 | 1.038486e-48 | -8.615850e-47 |
Msa0293000 | Msa0673620 | 0.808424 | 3.118808e-50 | -8.615850e-47 |
Msa0293000 | Msa0677110 | 0.844666 | 6.562992e-59 | -8.615850e-47 |
Msa0293000 | Msa0677250 | 0.826816 | 2.203932e-54 | -8.615850e-47 |
Msa0293000 | Msa0679270 | 0.801317 | 9.531029e-49 | -8.615850e-47 |
Msa0293000 | Msa0681100 | 0.810881 | 9.244200e-51 | -8.615850e-47 |
Msa0293000 | Msa0694910 | 0.805438 | 1.334641e-49 | -8.615850e-47 |
Msa0293000 | Msa0699900 | 0.814390 | 1.578644e-51 | -8.615850e-47 |
Msa0293000 | Msa0705130 | 0.803702 | 3.072990e-49 | -8.615850e-47 |
Msa0293000 | Msa0706790 | 0.802296 | 5.999501e-49 | -8.615850e-47 |
Msa0293000 | Msa0706860 | 0.809458 | 1.873761e-50 | -8.615850e-47 |
Msa0293000 | Msa0708120 | 0.820225 | 7.674906e-53 | -8.615850e-47 |
Msa0293000 | Msa0711860 | 0.800652 | 1.303701e-48 | -8.615850e-47 |
Msa0293000 | Msa0716670 | 0.837054 | 6.518349e-57 | -8.615850e-47 |
Msa0293000 | Msa0720850 | 0.805558 | 1.259422e-49 | -8.615850e-47 |
Msa0293000 | Msa0729120 | 0.824133 | 9.520204e-54 | -8.615850e-47 |
Msa0293000 | Msa0729590 | 0.809389 | 1.939009e-50 | -8.615850e-47 |
Msa0293000 | Msa0736330 | 0.801945 | 7.085786e-49 | -8.615850e-47 |
Msa0293000 | Msa0747900 | 0.803809 | 2.919676e-49 | -8.615850e-47 |
Msa0293000 | Msa0748470 | 0.809259 | 2.067038e-50 | -8.615850e-47 |
Msa0293000 | Msa0749160 | 0.831031 | 2.101973e-55 | -8.615850e-47 |
Msa0293000 | Msa0750940 | 0.801477 | 8.841505e-49 | -8.615850e-47 |
Msa0293000 | Msa0752830 | 0.824975 | 6.030368e-54 | -8.615850e-47 |
Msa0293000 | Msa0754790 | 0.818642 | 1.762106e-52 | -8.615850e-47 |
Msa0293000 | Msa0754840 | 0.843893 | 1.058829e-58 | -8.615850e-47 |
Msa0293000 | Msa0755220 | 0.815565 | 8.662503e-52 | -8.615850e-47 |
Msa0293000 | Msa0755250 | 0.803757 | 2.992660e-49 | -8.615850e-47 |
Msa0293000 | Msa0766880 | 0.829061 | 6.354713e-55 | -8.615850e-47 |
Msa0293000 | Msa0774020 | 0.804559 | 2.038424e-49 | -8.615850e-47 |
Msa0293000 | Msa0792860 | 0.821556 | 3.792044e-53 | -8.615850e-47 |
Msa0293000 | Msa0794130 | 0.810703 | 1.010083e-50 | -8.615850e-47 |
Msa0293000 | Msa0796610 | 0.804776 | 1.836036e-49 | -8.615850e-47 |
Msa0293000 | Msa0799150 | 0.836226 | 1.059478e-56 | -8.615850e-47 |
Msa0293000 | Msa0804930 | 0.803233 | 3.843304e-49 | -8.615850e-47 |
Msa0293000 | Msa0807840 | 0.822280 | 2.577927e-53 | -8.615850e-47 |
Msa0293000 | Msa0808500 | 0.818438 | 1.960418e-52 | -8.615850e-47 |
Msa0293000 | Msa0822800 | 0.821375 | 4.174634e-53 | -8.615850e-47 |
Msa0293000 | Msa0825960 | 0.814893 | 1.221768e-51 | -8.615850e-47 |
Msa0293000 | Msa0828730 | 0.822458 | 2.343662e-53 | -8.615850e-47 |
Msa0293000 | Msa0828810 | 0.841563 | 4.405031e-58 | -8.615850e-47 |
Msa0293000 | Msa0831710 | 0.809506 | 1.829952e-50 | -8.615850e-47 |
Msa0293000 | Msa0833910 | 0.824374 | 8.357184e-54 | -8.615850e-47 |
Msa0293000 | Msa0834160 | 0.813210 | 2.872584e-51 | -8.615850e-47 |
Msa0293000 | Msa0848780 | 0.800084 | 1.701344e-48 | -8.615850e-47 |
Msa0293000 | Msa0855490 | 0.805891 | 1.072375e-49 | -8.615850e-47 |
Msa0293000 | Msa0866310 | 0.822862 | 1.887339e-53 | -8.615850e-47 |
Msa0293000 | Msa0866510 | 0.816182 | 6.309239e-52 | -8.615850e-47 |
Msa0293000 | Msa0880200 | 0.805745 | 1.150776e-49 | -8.615850e-47 |
Msa0293000 | Msa0880370 | 0.809877 | 1.522466e-50 | -8.615850e-47 |
Msa0293000 | Msa0883880 | 0.816879 | 4.403273e-52 | -8.615850e-47 |
Msa0293000 | Msa0901660 | 0.819686 | 1.019594e-52 | -8.615850e-47 |
Msa0293000 | Msa0907520 | 0.807545 | 4.797952e-50 | -8.615850e-47 |
Msa0293000 | Msa0910650 | 0.830161 | 3.432734e-55 | -8.615850e-47 |
Msa0293000 | Msa0913120 | 0.803814 | 2.912971e-49 | -8.615850e-47 |
Msa0293000 | Msa0927190 | 0.818200 | 2.219476e-52 | -8.615850e-47 |
Msa0293000 | Msa0927830 | 0.802459 | 5.555134e-49 | -8.615850e-47 |
Msa0293000 | Msa0927890 | 0.817257 | 3.622676e-52 | -8.615850e-47 |
Msa0293000 | Msa0929820 | 0.809259 | 2.067543e-50 | -8.615850e-47 |
Msa0293000 | Msa0930150 | 0.831957 | 1.243348e-55 | -8.615850e-47 |
Msa0293000 | Msa0930160 | 0.810217 | 1.286266e-50 | -8.615850e-47 |
Msa0293000 | Msa0930950 | 0.823229 | 1.549878e-53 | -8.615850e-47 |
Msa0293000 | Msa0931240 | 0.800243 | 1.579386e-48 | -8.615850e-47 |
Msa0293000 | Msa0932040 | 0.812842 | 3.458695e-51 | -8.615850e-47 |
Msa0293000 | Msa0940400 | 0.824958 | 6.087382e-54 | -8.615850e-47 |
Msa0293000 | Msa0959970 | 0.821703 | 3.506209e-53 | -8.615850e-47 |
Msa0293000 | Msa0961200 | 0.807531 | 4.830421e-50 | -8.615850e-47 |
Msa0293000 | Msa0967260 | 0.803473 | 3.428248e-49 | -8.615850e-47 |
Msa0293000 | Msa0967540 | 0.823522 | 1.323738e-53 | -8.615850e-47 |
Msa0293000 | Msa0970160 | 0.814024 | 1.901920e-51 | -8.615850e-47 |
Msa0293000 | Msa0985570 | 0.812115 | 4.985976e-51 | -8.615850e-47 |
Msa0293000 | Msa0999480 | 0.812779 | 3.571019e-51 | -8.615850e-47 |
Msa0293000 | Msa1030950 | 0.812363 | 4.401725e-51 | -8.615850e-47 |
Msa0293000 | Msa1040030 | 0.800104 | 1.685565e-48 | -8.615850e-47 |
Msa0293000 | Msa1047390 | 0.801129 | 1.041436e-48 | -8.615850e-47 |
Msa0293000 | Msa1057320 | 0.848663 | 5.308344e-60 | -8.615850e-47 |
Msa0293000 | Msa1057340 | 0.832924 | 7.160633e-56 | -8.615850e-47 |
Msa0293000 | Msa1066930 | 0.823824 | 1.125186e-53 | -8.615850e-47 |
Msa0293000 | Msa1066980 | 0.804205 | 2.415496e-49 | -8.615850e-47 |
Msa0293000 | Msa1071380 | 0.809901 | 1.504437e-50 | -8.615850e-47 |
Msa0293000 | Msa1073140 | 0.812088 | 5.056044e-51 | -8.615850e-47 |
Msa0293000 | Msa1081950 | 0.831865 | 1.310144e-55 | -8.615850e-47 |
Msa0293000 | Msa1082640 | 0.822710 | 2.048005e-53 | -8.615850e-47 |
Msa0293000 | Msa1090230 | 0.801343 | 9.418434e-49 | -8.615850e-47 |
Msa0293000 | Msa1121580 | 0.815202 | 1.043331e-51 | -8.615850e-47 |
Msa0293000 | Msa1126790 | 0.804926 | 1.708334e-49 | -8.615850e-47 |
Msa0293000 | Msa1126810 | 0.801234 | 9.915235e-49 | -8.615850e-47 |
Msa0293000 | Msa1127530 | 0.816160 | 6.380619e-52 | -8.615850e-47 |
Msa0293000 | Msa1128850 | 0.842615 | 2.320448e-58 | -8.615850e-47 |
Msa0293000 | Msa1132540 | 0.830664 | 2.584994e-55 | -8.615850e-47 |
Msa0293000 | Msa1140940 | 0.803407 | 3.537861e-49 | -8.615850e-47 |
Msa0293000 | Msa1148100 | 0.816213 | 6.211027e-52 | -8.615850e-47 |
Msa0293000 | Msa1156270 | 0.827411 | 1.587834e-54 | -8.615850e-47 |
Msa0293000 | Msa1157680 | 0.809000 | 2.348530e-50 | -8.615850e-47 |
Msa0293000 | Msa1165330 | 0.800977 | 1.118898e-48 | -8.615850e-47 |
Msa0293000 | Msa1173410 | 0.861611 | 9.086365e-64 | -8.615850e-47 |
Msa0293000 | Msa1175970 | 0.809844 | 1.547477e-50 | -8.615850e-47 |
Msa0293000 | Msa1182950 | 0.803621 | 3.194888e-49 | -8.615850e-47 |
Msa0293000 | Msa1182960 | 0.805295 | 1.430327e-49 | -8.615850e-47 |
Msa0293000 | Msa1189630 | 0.818244 | 2.168965e-52 | -8.615850e-47 |
Msa0293000 | Msa1190300 | 0.854024 | 1.621186e-61 | -8.615850e-47 |
Msa0293000 | Msa1190320 | 0.859142 | 5.074683e-63 | -8.615850e-47 |
Msa0293000 | Msa1195860 | 0.802095 | 6.599082e-49 | -8.615850e-47 |
Msa0293000 | Msa1196910 | 0.844091 | 9.367326e-59 | -8.615850e-47 |
Msa0293000 | Msa1198420 | 0.829739 | 4.348777e-55 | -8.615850e-47 |
Msa0293000 | Msa1199690 | 0.848135 | 7.434843e-60 | -8.615850e-47 |
Msa0293000 | Msa1203840 | 0.801439 | 9.000529e-49 | -8.615850e-47 |
Msa0293000 | Msa1203860 | 0.846389 | 2.240001e-59 | -8.615850e-47 |
Msa0293000 | Msa1209240 | 0.815220 | 1.033819e-51 | -8.615850e-47 |
Msa0293000 | Msa1209390 | 0.803353 | 3.630582e-49 | -8.615850e-47 |
Msa0293000 | Msa1209650 | 0.800711 | 1.267951e-48 | -8.615850e-47 |
Msa0293000 | Msa1220740 | 0.807867 | 4.097777e-50 | -8.615850e-47 |
Msa0293000 | Msa1222900 | 0.808637 | 2.808116e-50 | -8.615850e-47 |
Msa0293000 | Msa1223050 | 0.801131 | 1.040540e-48 | -8.615850e-47 |
Msa0293000 | Msa1244770 | 0.811852 | 5.690175e-51 | -8.615850e-47 |
Msa0293000 | Msa1249740 | 0.845890 | 3.063014e-59 | -8.615850e-47 |
Msa0293000 | Msa1263600 | 0.800055 | 1.724774e-48 | -8.615850e-47 |
Msa0293000 | Msa1263970 | 0.803374 | 3.594278e-49 | -8.615850e-47 |
Msa0293000 | Msa1267800 | 0.812802 | 3.529340e-51 | -8.615850e-47 |
Msa0293000 | Msa1278120 | 0.827673 | 1.373665e-54 | -8.615850e-47 |
Msa0293000 | Msa1285870 | 0.812386 | 4.351699e-51 | -8.615850e-47 |
Msa0293000 | Msa1286910 | 0.835801 | 1.357917e-56 | -8.615850e-47 |
Msa0293000 | Msa1296270 | 0.819646 | 1.041429e-52 | -8.615850e-47 |
Msa0293000 | Msa1309910 | 0.818334 | 2.069087e-52 | -8.615850e-47 |
Msa0293000 | Msa1317340 | 0.823862 | 1.102187e-53 | -8.615850e-47 |
Msa0293000 | Msa1317380 | 0.815853 | 7.470846e-52 | -8.615850e-47 |
Msa0293000 | Msa1319270 | 0.813536 | 2.435652e-51 | -8.615850e-47 |
Msa0293000 | Msa1327040 | 0.853023 | 3.141761e-61 | -8.615850e-47 |
Msa0293000 | Msa1330080 | 0.801405 | 9.146065e-49 | -8.615850e-47 |
Msa0293000 | Msa1330910 | 0.827148 | 1.835744e-54 | -8.615850e-47 |
Msa0293000 | Msa1334650 | 0.806548 | 7.796090e-50 | -8.615850e-47 |
Msa0293000 | Msa1337950 | 0.803226 | 3.856894e-49 | -8.615850e-47 |
Msa0293000 | Msa1349720 | 0.821669 | 3.570713e-53 | -8.615850e-47 |
Msa0293000 | Msa1349850 | 0.829356 | 5.389830e-55 | -8.615850e-47 |
Msa0293000 | Msa1354930 | 0.801780 | 7.662138e-49 | -8.615850e-47 |
Msa0293000 | Msa1355100 | 0.804664 | 1.937945e-49 | -8.615850e-47 |
Msa0293000 | Msa1355490 | 0.820822 | 5.598683e-53 | -8.615850e-47 |
Msa0293000 | Msa1356500 | 0.813799 | 2.131590e-51 | -8.615850e-47 |
Msa0293000 | Msa1358790 | 0.833853 | 4.199676e-56 | -8.615850e-47 |
Msa0293000 | Msa1364420 | 0.803327 | 3.674957e-49 | -8.615850e-47 |
Msa0293000 | Msa1364520 | 0.833914 | 4.055763e-56 | -8.615850e-47 |
Msa0293000 | Msa1364650 | 0.804900 | 1.730095e-49 | -8.615850e-47 |
Msa0293000 | Msa1364850 | 0.804322 | 2.284086e-49 | -8.615850e-47 |
Msa0293000 | Msa1365210 | 0.816431 | 5.550114e-52 | -8.615850e-47 |
Msa0293000 | Msa1374610 | 0.828687 | 7.826217e-55 | -8.615850e-47 |
Msa0293000 | Msa1375120 | 0.831113 | 2.006517e-55 | -8.615850e-47 |
Msa0293000 | Msa1375650 | 0.802507 | 5.429818e-49 | -8.615850e-47 |
Msa0293000 | Msa1376510 | 0.814231 | 1.711425e-51 | -8.615850e-47 |
Msa0293000 | Msa1385940 | 0.806434 | 8.242551e-50 | -8.615850e-47 |
Msa0293000 | Msa1388070 | 0.809897 | 1.508016e-50 | -8.615850e-47 |
Msa0293000 | Msa1397040 | 0.819065 | 1.412363e-52 | -8.615850e-47 |
Msa0293000 | Msa1412750 | 0.802712 | 4.925415e-49 | -8.615850e-47 |
Msa0293000 | Msa1413220 | 0.817188 | 3.753028e-52 | -8.615850e-47 |
Msa0293000 | Msa1414000 | 0.806262 | 8.961012e-50 | -8.615850e-47 |
Msa0293000 | Msa1427020 | 0.809027 | 2.317722e-50 | -8.615850e-47 |
Msa0293000 | Msa1434780 | 0.809896 | 1.508388e-50 | -8.615850e-47 |
Msa0293000 | Msa1435690 | 0.800183 | 1.624240e-48 | -8.615850e-47 |
Msa0293000 | Msa1444750 | 0.810265 | 1.256351e-50 | -8.615850e-47 |
Msa0293000 | Msa1455000 | 0.818313 | 2.092563e-52 | -8.615850e-47 |
Msa0293000 | Msa1460340 | 0.808508 | 2.992941e-50 | -8.615850e-47 |
Msa0293000 | Msa1462700 | 0.804172 | 2.454279e-49 | -8.615850e-47 |
Msa0293000 | Msa1466170 | 0.804068 | 2.579807e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0293000 | MtrunA17_Chr2g0313871 | 99.541 | 218 | 1 | 0 | 1 | 218 | 204 | 421 | 4.39e-156 | 439 |
Msa0293000 | MtrunA17_Chr4g0053631 | 39.899 | 198 | 119 | 0 | 1 | 198 | 194 | 391 | 6.75e-50 | 167 |
Msa0293000 | MtrunA17_Chr8g0373601 | 33.117 | 154 | 94 | 2 | 1 | 145 | 180 | 333 | 5.58e-17 | 78.6 |
Msa0293000 | MtrunA17_Chr5g0403581 | 33.125 | 160 | 98 | 2 | 1 | 151 | 179 | 338 | 1.03e-16 | 77.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0293000 | AT1G78510.2 | 78.802 | 217 | 46 | 0 | 1 | 217 | 150 | 366 | 4.99e-124 | 355 |
Msa0293000 | AT1G78510.1 | 78.802 | 217 | 46 | 0 | 1 | 217 | 189 | 405 | 1.75e-123 | 356 |
Msa0293000 | AT1G17050.1 | 76.959 | 217 | 50 | 0 | 1 | 217 | 200 | 416 | 9.97e-123 | 354 |
Msa0293000 | AT2G34630.1 | 39.000 | 200 | 122 | 0 | 1 | 200 | 98 | 297 | 8.89e-50 | 165 |
Msa0293000 | AT2G34630.2 | 39.000 | 200 | 122 | 0 | 1 | 200 | 199 | 398 | 1.56e-48 | 164 |
Msa0293000 | AT2G18620.1 | 37.647 | 170 | 94 | 5 | 1 | 159 | 154 | 322 | 3.14e-18 | 82.0 |
Msa0293000 | AT3G20160.1 | 35.032 | 157 | 89 | 4 | 1 | 145 | 150 | 305 | 3.93e-18 | 82.0 |
Msa0293000 | AT4G36810.1 | 37.736 | 159 | 84 | 5 | 1 | 145 | 175 | 332 | 1.08e-17 | 80.9 |
Msa0293000 | AT2G18640.1 | 35.065 | 154 | 91 | 3 | 1 | 145 | 180 | 333 | 5.47e-17 | 79.0 |
Msa0293000 | AT3G14510.1 | 33.553 | 152 | 97 | 2 | 12 | 159 | 108 | 259 | 9.33e-17 | 77.4 |
Msa0293000 | AT3G20160.2 | 45.455 | 77 | 41 | 1 | 69 | 145 | 202 | 277 | 6.34e-13 | 67.0 |
Msa0293000 | AT2G23800.1 | 32.903 | 155 | 93 | 5 | 1 | 145 | 184 | 337 | 7.52e-12 | 64.3 |
Msa0293000 | AT3G32040.1 | 31.579 | 152 | 100 | 2 | 12 | 159 | 184 | 335 | 1.10e-11 | 63.5 |
Msa0293000 | AT3G29430.1 | 37.500 | 104 | 65 | 0 | 56 | 159 | 229 | 332 | 1.38e-11 | 63.2 |
Msa0293000 | AT3G14550.3 | 36.522 | 115 | 72 | 1 | 46 | 159 | 221 | 335 | 1.51e-11 | 63.2 |
Msa0293000 | AT3G14550.1 | 36.522 | 115 | 72 | 1 | 46 | 159 | 221 | 335 | 1.51e-11 | 63.2 |
Msa0293000 | AT3G14550.2 | 36.522 | 115 | 72 | 1 | 46 | 159 | 221 | 335 | 1.51e-11 | 63.2 |
Msa0293000 | AT3G14530.1 | 36.522 | 115 | 72 | 1 | 46 | 159 | 221 | 335 | 4.18e-11 | 62.0 |
Find 49 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCCAACGCGAAAATTAC+AGG | 0.258160 | 2_3:-42905933 | None:intergenic |
CCAGATCCAAGAAAATAAAA+TGG | 0.265102 | 2_3:-42906397 | None:intergenic |
TTGATTGCTGCCAGCGTAAA+AGG | 0.270096 | 2_3:+42905738 | Msa0293000:CDS |
GAAACTGTTCATCAAATGTT+TGG | 0.338601 | 2_3:+42905206 | Msa0293000:exon |
CCAAGTTGTCGACGACATAT+TGG | 0.347498 | 2_3:+42905839 | Msa0293000:CDS |
CGAAAATTACAGGAGCTGTT+AGG | 0.381707 | 2_3:-42905923 | None:intergenic |
TCAATGATATCCCTCAATTT+CGG | 0.393056 | 2_3:-42905960 | None:intergenic |
CAGATCCAAGAAAATAAAAT+GGG | 0.409484 | 2_3:-42906396 | None:intergenic |
AGGAGCTGTTAGGTTACCTT+TGG | 0.423788 | 2_3:-42905913 | None:intergenic |
CCAATATGTCGTCGACAACT+TGG | 0.427937 | 2_3:-42905839 | None:intergenic |
GAGTCTGAATTTAGCGAGAT+TGG | 0.432083 | 2_3:+42905981 | Msa0293000:CDS |
GAAGGTGTTGATGGATTTGT+TGG | 0.433548 | 2_3:-42906254 | None:intergenic |
ACTGAGAAAATGTTCGAATA+CGG | 0.446574 | 2_3:+42905795 | Msa0293000:CDS |
ATCAAGTTGGTTAAGAGTTG+TGG | 0.459670 | 2_3:+42906020 | Msa0293000:CDS |
AGCTTGCTTTATTTCTCCAC+TGG | 0.468481 | 2_3:-42905646 | None:intergenic |
TCAAGTTGGTTAAGAGTTGT+GGG | 0.479565 | 2_3:+42906021 | Msa0293000:CDS |
ACAAGAGTGGCAGTGCTGGC+TGG | 0.494391 | 2_3:+42905230 | Msa0293000:CDS |
ACAAAGGGAGAAGGTGTTGA+TGG | 0.496486 | 2_3:-42906263 | None:intergenic |
TTTCTTGGATCTGGTTGTAA+GGG | 0.496646 | 2_3:+42906406 | Msa0293000:three_prime_UTR |
ACGCAATCGGCAGAGCAACT+TGG | 0.497280 | 2_3:+42905867 | Msa0293000:CDS |
TTCGAATACGGGAAGAATCT+CGG | 0.498347 | 2_3:+42905807 | Msa0293000:CDS |
TGGAACAAGAGTGGCAGTGC+TGG | 0.503897 | 2_3:+42905226 | Msa0293000:CDS |
TGGAGAAAGAACCGAAATTG+AGG | 0.505243 | 2_3:+42905949 | Msa0293000:CDS |
CTGAGAAAATGTTCGAATAC+GGG | 0.508576 | 2_3:+42905796 | Msa0293000:CDS |
CATATTGGATTTCACGCAAT+CGG | 0.510526 | 2_3:+42905854 | Msa0293000:CDS |
GGCAGAGCAACTTGGAAAGC+CGG | 0.515718 | 2_3:+42905875 | Msa0293000:CDS |
TCATGTTTGCACAATCATCA+TGG | 0.521316 | 2_3:+42905258 | Msa0293000:CDS |
TTGGCGAGGTCCGTGCATGC+CGG | 0.522262 | 2_3:-42905894 | None:intergenic |
GCTAAACGATACACACTTGG+AGG | 0.522408 | 2_3:-42906113 | None:intergenic |
ACTTGGAAAGCCGGCATGCA+CGG | 0.524987 | 2_3:+42905884 | Msa0293000:CDS |
AGTCATTAAACTTATCAGCC+AGG | 0.530858 | 2_3:+42905307 | Msa0293000:CDS |
GGAGAAAGAACCGAAATTGA+GGG | 0.533563 | 2_3:+42905950 | Msa0293000:CDS |
TACCAGTGTATAGACATTGA+AGG | 0.556359 | 2_3:+42906300 | Msa0293000:three_prime_UTR |
TCGTTTAGCTCTTGAGGACA+TGG | 0.571941 | 2_3:+42906127 | Msa0293000:CDS |
AAAAGTAGCACAAAGGGAGA+AGG | 0.579675 | 2_3:-42906272 | None:intergenic |
TGGTGACATATAATCTTCAA+AGG | 0.582035 | 2_3:+42906147 | Msa0293000:CDS |
AATCGAAAGAGCACAAGAGT+TGG | 0.582560 | 2_3:+42906046 | Msa0293000:CDS |
TGTGTATCGTTTAGCTCTTG+AGG | 0.586196 | 2_3:+42906121 | Msa0293000:CDS |
AAGTTGGTTAAGAGTTGTGG+GGG | 0.591345 | 2_3:+42906023 | Msa0293000:CDS |
GCATGCACGGACCTCGCCAA+AGG | 0.594923 | 2_3:+42905897 | Msa0293000:CDS |
TATGTCGTCGACAACTTGGA+AGG | 0.598026 | 2_3:-42905835 | None:intergenic |
TCAAATGTTTGGAACAAGAG+TGG | 0.606800 | 2_3:+42905217 | Msa0293000:exon |
ATCCTTCAATGTCTATACAC+TGG | 0.610603 | 2_3:-42906302 | None:intergenic |
CTGTTAGGTTACCTTTGGCG+AGG | 0.614390 | 2_3:-42905908 | None:intergenic |
TCTTGACGAAGCGATCAAGT+TGG | 0.618929 | 2_3:+42906007 | Msa0293000:CDS |
AGAGCTAAACGATACACACT+TGG | 0.629738 | 2_3:-42906116 | None:intergenic |
CAAGTTGGTTAAGAGTTGTG+GGG | 0.643343 | 2_3:+42906022 | Msa0293000:CDS |
AGATCCAAGAAAATAAAATG+GGG | 0.695397 | 2_3:-42906395 | None:intergenic |
TACGCTGGCAGCAATCAAGG+AGG | 0.714158 | 2_3:-42905733 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATGAAAAAATCATTATTT+CGG | + | chr2_3:42905520-42905539 | Msa0293000:intron | 10.0% |
!! | TAATGAAAAAATCATTATTT+CGG | + | chr2_3:42905520-42905539 | Msa0293000:intron | 10.0% |
!!! | TTTTAAAAGTTGTATAATGA+TGG | - | chr2_3:42905339-42905358 | None:intergenic | 15.0% |
!!! | TTTTATTATTGCAAAACTTT+TGG | + | chr2_3:42905597-42905616 | Msa0293000:intron | 15.0% |
!! | TAAGATCATAAATACAAAAA+TGG | - | chr2_3:42906352-42906371 | None:intergenic | 15.0% |
!!! | TTTTAAAAGTTGTATAATGA+TGG | - | chr2_3:42905339-42905358 | None:intergenic | 15.0% |
!!! | TTTTATTATTGCAAAACTTT+TGG | + | chr2_3:42905597-42905616 | Msa0293000:intron | 15.0% |
!! | TAAGATCATAAATACAAAAA+TGG | - | chr2_3:42906352-42906371 | None:intergenic | 15.0% |
!! | AGTAATTGATATCCATTTAA+GGG | - | chr2_3:42905456-42905475 | None:intergenic | 20.0% |
!! | AAGTAATTGATATCCATTTA+AGG | - | chr2_3:42905457-42905476 | None:intergenic | 20.0% |
!! | TAAAAACAATGTTTAGAAAG+TGG | - | chr2_3:42905582-42905601 | None:intergenic | 20.0% |
!! | AGTAATTGATATCCATTTAA+GGG | - | chr2_3:42905456-42905475 | None:intergenic | 20.0% |
!! | AAGTAATTGATATCCATTTA+AGG | - | chr2_3:42905457-42905476 | None:intergenic | 20.0% |
!! | TAAAAACAATGTTTAGAAAG+TGG | - | chr2_3:42905582-42905601 | None:intergenic | 20.0% |
!! | TAATGACTTCAATGTTTTCA+AGG | - | chr2_3:42905295-42905314 | None:intergenic | 25.0% |
! | GTAATTGATATCCATTTAAG+GGG | - | chr2_3:42905455-42905474 | None:intergenic | 25.0% |
! | AATGGATATCAATTACTTCA+AGG | + | chr2_3:42905459-42905478 | Msa0293000:intron | 25.0% |
! | ATGGATATCAATTACTTCAA+GGG | + | chr2_3:42905460-42905479 | Msa0293000:intron | 25.0% |
!!! | TTTTCCCCATTTTATTTTCT+TGG | + | chr2_3:42906391-42906410 | Msa0293000:three_prime_UTR | 25.0% |
! | AGATCCAAGAAAATAAAATG+GGG | - | chr2_3:42906398-42906417 | None:intergenic | 25.0% |
! | CAGATCCAAGAAAATAAAAT+GGG | - | chr2_3:42906399-42906418 | None:intergenic | 25.0% |
!! | TAATGACTTCAATGTTTTCA+AGG | - | chr2_3:42905295-42905314 | None:intergenic | 25.0% |
! | GTAATTGATATCCATTTAAG+GGG | - | chr2_3:42905455-42905474 | None:intergenic | 25.0% |
! | AATGGATATCAATTACTTCA+AGG | + | chr2_3:42905459-42905478 | Msa0293000:intron | 25.0% |
! | ATGGATATCAATTACTTCAA+GGG | + | chr2_3:42905460-42905479 | Msa0293000:intron | 25.0% |
!!! | TTTTCCCCATTTTATTTTCT+TGG | + | chr2_3:42906391-42906410 | Msa0293000:three_prime_UTR | 25.0% |
! | AGATCCAAGAAAATAAAATG+GGG | - | chr2_3:42906398-42906417 | None:intergenic | 25.0% |
! | CAGATCCAAGAAAATAAAAT+GGG | - | chr2_3:42906399-42906418 | None:intergenic | 25.0% |
GAAACTGTTCATCAAATGTT+TGG | + | chr2_3:42905206-42905225 | Msa0293000:exon | 30.0% | |
ATACGTTCTTTCATATTCAC+CGG | - | chr2_3:42905417-42905436 | None:intergenic | 30.0% | |
AATATGAAAGAACGTATGCT+AGG | + | chr2_3:42905420-42905439 | Msa0293000:intron | 30.0% | |
TATCAATTACTTCAAGGGAT+TGG | + | chr2_3:42905465-42905484 | Msa0293000:intron | 30.0% | |
ATCAATTACTTCAAGGGATT+GGG | + | chr2_3:42905466-42905485 | Msa0293000:intron | 30.0% | |
ACTGAGAAAATGTTCGAATA+CGG | + | chr2_3:42905795-42905814 | Msa0293000:CDS | 30.0% | |
TCAATGATATCCCTCAATTT+CGG | - | chr2_3:42905963-42905982 | None:intergenic | 30.0% | |
TGGTGACATATAATCTTCAA+AGG | + | chr2_3:42906147-42906166 | Msa0293000:CDS | 30.0% | |
AACTCAAAAAGTAGCACAAA+GGG | - | chr2_3:42906281-42906300 | None:intergenic | 30.0% | |
TAACTCAAAAAGTAGCACAA+AGG | - | chr2_3:42906282-42906301 | None:intergenic | 30.0% | |
CCAGATCCAAGAAAATAAAA+TGG | - | chr2_3:42906400-42906419 | None:intergenic | 30.0% | |
!!! | CCATTTTATTTTCTTGGATC+TGG | + | chr2_3:42906397-42906416 | Msa0293000:three_prime_UTR | 30.0% |
GAAACTGTTCATCAAATGTT+TGG | + | chr2_3:42905206-42905225 | Msa0293000:exon | 30.0% | |
ATACGTTCTTTCATATTCAC+CGG | - | chr2_3:42905417-42905436 | None:intergenic | 30.0% | |
AATATGAAAGAACGTATGCT+AGG | + | chr2_3:42905420-42905439 | Msa0293000:intron | 30.0% | |
TATCAATTACTTCAAGGGAT+TGG | + | chr2_3:42905465-42905484 | Msa0293000:intron | 30.0% | |
ATCAATTACTTCAAGGGATT+GGG | + | chr2_3:42905466-42905485 | Msa0293000:intron | 30.0% | |
ACTGAGAAAATGTTCGAATA+CGG | + | chr2_3:42905795-42905814 | Msa0293000:CDS | 30.0% | |
TCAATGATATCCCTCAATTT+CGG | - | chr2_3:42905963-42905982 | None:intergenic | 30.0% | |
TGGTGACATATAATCTTCAA+AGG | + | chr2_3:42906147-42906166 | Msa0293000:CDS | 30.0% | |
AACTCAAAAAGTAGCACAAA+GGG | - | chr2_3:42906281-42906300 | None:intergenic | 30.0% | |
TAACTCAAAAAGTAGCACAA+AGG | - | chr2_3:42906282-42906301 | None:intergenic | 30.0% | |
CCAGATCCAAGAAAATAAAA+TGG | - | chr2_3:42906400-42906419 | None:intergenic | 30.0% | |
!!! | CCATTTTATTTTCTTGGATC+TGG | + | chr2_3:42906397-42906416 | Msa0293000:three_prime_UTR | 30.0% |
! | TCAAATGTTTGGAACAAGAG+TGG | + | chr2_3:42905217-42905236 | Msa0293000:exon | 35.0% |
TCATGTTTGCACAATCATCA+TGG | + | chr2_3:42905258-42905277 | Msa0293000:CDS | 35.0% | |
!! | GACTTCAATGTTTTCAAGGT+TGG | - | chr2_3:42905291-42905310 | None:intergenic | 35.0% |
AGTCATTAAACTTATCAGCC+AGG | + | chr2_3:42905307-42905326 | Msa0293000:CDS | 35.0% | |
! | GTATAATGATGGAACTTACC+TGG | - | chr2_3:42905328-42905347 | None:intergenic | 35.0% |
! | GTGATTAAAGATTTTGCCAG+TGG | + | chr2_3:42905630-42905649 | Msa0293000:CDS | 35.0% |
CTGAGAAAATGTTCGAATAC+GGG | + | chr2_3:42905796-42905815 | Msa0293000:CDS | 35.0% | |
CATATTGGATTTCACGCAAT+CGG | + | chr2_3:42905854-42905873 | Msa0293000:CDS | 35.0% | |
!! | ATCAAGTTGGTTAAGAGTTG+TGG | + | chr2_3:42906020-42906039 | Msa0293000:CDS | 35.0% |
!! | TCAAGTTGGTTAAGAGTTGT+GGG | + | chr2_3:42906021-42906040 | Msa0293000:CDS | 35.0% |
TACCAGTGTATAGACATTGA+AGG | + | chr2_3:42906300-42906319 | Msa0293000:three_prime_UTR | 35.0% | |
ATCCTTCAATGTCTATACAC+TGG | - | chr2_3:42906305-42906324 | None:intergenic | 35.0% | |
! | TTTTCTTGGATCTGGTTGTA+AGG | + | chr2_3:42906405-42906424 | Msa0293000:three_prime_UTR | 35.0% |
TTTCTTGGATCTGGTTGTAA+GGG | + | chr2_3:42906406-42906425 | Msa0293000:three_prime_UTR | 35.0% | |
! | TCAAATGTTTGGAACAAGAG+TGG | + | chr2_3:42905217-42905236 | Msa0293000:exon | 35.0% |
TCATGTTTGCACAATCATCA+TGG | + | chr2_3:42905258-42905277 | Msa0293000:CDS | 35.0% | |
!! | GACTTCAATGTTTTCAAGGT+TGG | - | chr2_3:42905291-42905310 | None:intergenic | 35.0% |
AGTCATTAAACTTATCAGCC+AGG | + | chr2_3:42905307-42905326 | Msa0293000:CDS | 35.0% | |
! | GTATAATGATGGAACTTACC+TGG | - | chr2_3:42905328-42905347 | None:intergenic | 35.0% |
! | GTGATTAAAGATTTTGCCAG+TGG | + | chr2_3:42905630-42905649 | Msa0293000:CDS | 35.0% |
CTGAGAAAATGTTCGAATAC+GGG | + | chr2_3:42905796-42905815 | Msa0293000:CDS | 35.0% | |
CATATTGGATTTCACGCAAT+CGG | + | chr2_3:42905854-42905873 | Msa0293000:CDS | 35.0% | |
!! | ATCAAGTTGGTTAAGAGTTG+TGG | + | chr2_3:42906020-42906039 | Msa0293000:CDS | 35.0% |
!! | TCAAGTTGGTTAAGAGTTGT+GGG | + | chr2_3:42906021-42906040 | Msa0293000:CDS | 35.0% |
TACCAGTGTATAGACATTGA+AGG | + | chr2_3:42906300-42906319 | Msa0293000:three_prime_UTR | 35.0% | |
ATCCTTCAATGTCTATACAC+TGG | - | chr2_3:42906305-42906324 | None:intergenic | 35.0% | |
! | TTTTCTTGGATCTGGTTGTA+AGG | + | chr2_3:42906405-42906424 | Msa0293000:three_prime_UTR | 35.0% |
ATCATTCCAAGATTCAACCC+TGG | + | chr2_3:42905391-42905410 | Msa0293000:intron | 40.0% | |
GAAAGAACGTATGCTAGGAT+AGG | + | chr2_3:42905425-42905444 | Msa0293000:intron | 40.0% | |
!! | CAAAACTTTTGGTGTGTGAC+AGG | + | chr2_3:42905608-42905627 | Msa0293000:intron | 40.0% |
!! | AGCTTGCTTTATTTCTCCAC+TGG | - | chr2_3:42905649-42905668 | None:intergenic | 40.0% |
TTCGAATACGGGAAGAATCT+CGG | + | chr2_3:42905807-42905826 | Msa0293000:CDS | 40.0% | |
CGAAAATTACAGGAGCTGTT+AGG | - | chr2_3:42905926-42905945 | None:intergenic | 40.0% | |
TTCTCCAACGCGAAAATTAC+AGG | - | chr2_3:42905936-42905955 | None:intergenic | 40.0% | |
TGGAGAAAGAACCGAAATTG+AGG | + | chr2_3:42905949-42905968 | Msa0293000:CDS | 40.0% | |
GGAGAAAGAACCGAAATTGA+GGG | + | chr2_3:42905950-42905969 | Msa0293000:CDS | 40.0% | |
GAGTCTGAATTTAGCGAGAT+TGG | + | chr2_3:42905981-42906000 | Msa0293000:CDS | 40.0% | |
!! | CAAGTTGGTTAAGAGTTGTG+GGG | + | chr2_3:42906022-42906041 | Msa0293000:CDS | 40.0% |
! | AAGTTGGTTAAGAGTTGTGG+GGG | + | chr2_3:42906023-42906042 | Msa0293000:CDS | 40.0% |
! | AATCGAAAGAGCACAAGAGT+TGG | + | chr2_3:42906046-42906065 | Msa0293000:CDS | 40.0% |
AGAGCTAAACGATACACACT+TGG | - | chr2_3:42906119-42906138 | None:intergenic | 40.0% | |
!! | TGTGTATCGTTTAGCTCTTG+AGG | + | chr2_3:42906121-42906140 | Msa0293000:CDS | 40.0% |
!! | GAAGGTGTTGATGGATTTGT+TGG | - | chr2_3:42906257-42906276 | None:intergenic | 40.0% |
AAAAGTAGCACAAAGGGAGA+AGG | - | chr2_3:42906275-42906294 | None:intergenic | 40.0% | |
TTCTTGGATCTGGTTGTAAG+GGG | + | chr2_3:42906407-42906426 | Msa0293000:three_prime_UTR | 40.0% | |
ATCATTCCAAGATTCAACCC+TGG | + | chr2_3:42905391-42905410 | Msa0293000:intron | 40.0% | |
GAAAGAACGTATGCTAGGAT+AGG | + | chr2_3:42905425-42905444 | Msa0293000:intron | 40.0% | |
!! | CAAAACTTTTGGTGTGTGAC+AGG | + | chr2_3:42905608-42905627 | Msa0293000:intron | 40.0% |
!! | AGCTTGCTTTATTTCTCCAC+TGG | - | chr2_3:42905649-42905668 | None:intergenic | 40.0% |
TTCGAATACGGGAAGAATCT+CGG | + | chr2_3:42905807-42905826 | Msa0293000:CDS | 40.0% | |
CGAAAATTACAGGAGCTGTT+AGG | - | chr2_3:42905926-42905945 | None:intergenic | 40.0% | |
TTCTCCAACGCGAAAATTAC+AGG | - | chr2_3:42905936-42905955 | None:intergenic | 40.0% | |
TGGAGAAAGAACCGAAATTG+AGG | + | chr2_3:42905949-42905968 | Msa0293000:CDS | 40.0% | |
GGAGAAAGAACCGAAATTGA+GGG | + | chr2_3:42905950-42905969 | Msa0293000:CDS | 40.0% | |
GAGTCTGAATTTAGCGAGAT+TGG | + | chr2_3:42905981-42906000 | Msa0293000:CDS | 40.0% | |
!! | CAAGTTGGTTAAGAGTTGTG+GGG | + | chr2_3:42906022-42906041 | Msa0293000:CDS | 40.0% |
! | AAGTTGGTTAAGAGTTGTGG+GGG | + | chr2_3:42906023-42906042 | Msa0293000:CDS | 40.0% |
! | AATCGAAAGAGCACAAGAGT+TGG | + | chr2_3:42906046-42906065 | Msa0293000:CDS | 40.0% |
AGAGCTAAACGATACACACT+TGG | - | chr2_3:42906119-42906138 | None:intergenic | 40.0% | |
!! | TGTGTATCGTTTAGCTCTTG+AGG | + | chr2_3:42906121-42906140 | Msa0293000:CDS | 40.0% |
!! | GAAGGTGTTGATGGATTTGT+TGG | - | chr2_3:42906257-42906276 | None:intergenic | 40.0% |
AAAAGTAGCACAAAGGGAGA+AGG | - | chr2_3:42906275-42906294 | None:intergenic | 40.0% | |
TCTTTCATATTCACCGGCCA+GGG | - | chr2_3:42905411-42905430 | None:intergenic | 45.0% | |
TTCTTTCATATTCACCGGCC+AGG | - | chr2_3:42905412-42905431 | None:intergenic | 45.0% | |
GGATAGGTCAACCCCTTAAA+TGG | + | chr2_3:42905441-42905460 | Msa0293000:intron | 45.0% | |
! | TTTTACGCTGGCAGCAATCA+AGG | - | chr2_3:42905739-42905758 | None:intergenic | 45.0% |
TTGATTGCTGCCAGCGTAAA+AGG | + | chr2_3:42905738-42905757 | Msa0293000:CDS | 45.0% | |
! | AAAGGAGCTGCAGTTTTCAG+CGG | + | chr2_3:42905756-42905775 | Msa0293000:CDS | 45.0% |
TATGTCGTCGACAACTTGGA+AGG | - | chr2_3:42905838-42905857 | None:intergenic | 45.0% | |
CCAATATGTCGTCGACAACT+TGG | - | chr2_3:42905842-42905861 | None:intergenic | 45.0% | |
CCAAGTTGTCGACGACATAT+TGG | + | chr2_3:42905839-42905858 | Msa0293000:CDS | 45.0% | |
AGGAGCTGTTAGGTTACCTT+TGG | - | chr2_3:42905916-42905935 | None:intergenic | 45.0% | |
! | AGCTCCTGTAATTTTCGCGT+TGG | + | chr2_3:42905929-42905948 | Msa0293000:CDS | 45.0% |
TCTTGACGAAGCGATCAAGT+TGG | + | chr2_3:42906007-42906026 | Msa0293000:CDS | 45.0% | |
GCTAAACGATACACACTTGG+AGG | - | chr2_3:42906116-42906135 | None:intergenic | 45.0% | |
!! | TCGTTTAGCTCTTGAGGACA+TGG | + | chr2_3:42906127-42906146 | Msa0293000:CDS | 45.0% |
!! | ACAAAGGGAGAAGGTGTTGA+TGG | - | chr2_3:42906266-42906285 | None:intergenic | 45.0% |
TCTTGGATCTGGTTGTAAGG+GGG | + | chr2_3:42906408-42906427 | Msa0293000:three_prime_UTR | 45.0% | |
TCTTTCATATTCACCGGCCA+GGG | - | chr2_3:42905411-42905430 | None:intergenic | 45.0% | |
TTCTTTCATATTCACCGGCC+AGG | - | chr2_3:42905412-42905431 | None:intergenic | 45.0% | |
GGATAGGTCAACCCCTTAAA+TGG | + | chr2_3:42905441-42905460 | Msa0293000:intron | 45.0% | |
! | TTTTACGCTGGCAGCAATCA+AGG | - | chr2_3:42905739-42905758 | None:intergenic | 45.0% |
TTGATTGCTGCCAGCGTAAA+AGG | + | chr2_3:42905738-42905757 | Msa0293000:CDS | 45.0% | |
! | AAAGGAGCTGCAGTTTTCAG+CGG | + | chr2_3:42905756-42905775 | Msa0293000:CDS | 45.0% |
TATGTCGTCGACAACTTGGA+AGG | - | chr2_3:42905838-42905857 | None:intergenic | 45.0% | |
CCAATATGTCGTCGACAACT+TGG | - | chr2_3:42905842-42905861 | None:intergenic | 45.0% | |
CCAAGTTGTCGACGACATAT+TGG | + | chr2_3:42905839-42905858 | Msa0293000:CDS | 45.0% | |
AGGAGCTGTTAGGTTACCTT+TGG | - | chr2_3:42905916-42905935 | None:intergenic | 45.0% | |
! | AGCTCCTGTAATTTTCGCGT+TGG | + | chr2_3:42905929-42905948 | Msa0293000:CDS | 45.0% |
TCTTGACGAAGCGATCAAGT+TGG | + | chr2_3:42906007-42906026 | Msa0293000:CDS | 45.0% | |
GCTAAACGATACACACTTGG+AGG | - | chr2_3:42906116-42906135 | None:intergenic | 45.0% | |
!! | TCGTTTAGCTCTTGAGGACA+TGG | + | chr2_3:42906127-42906146 | Msa0293000:CDS | 45.0% |
!! | ACAAAGGGAGAAGGTGTTGA+TGG | - | chr2_3:42906266-42906285 | None:intergenic | 45.0% |
TTCCAAGATTCAACCCTGGC+CGG | + | chr2_3:42905395-42905414 | Msa0293000:intron | 50.0% | |
! | AACTGCAGCTCCTTTTACGC+TGG | - | chr2_3:42905751-42905770 | None:intergenic | 50.0% |
CTGTTAGGTTACCTTTGGCG+AGG | - | chr2_3:42905911-42905930 | None:intergenic | 50.0% | |
CTTGGATCTGGTTGTAAGGG+GGG | + | chr2_3:42906409-42906428 | Msa0293000:three_prime_UTR | 50.0% | |
TTCCAAGATTCAACCCTGGC+CGG | + | chr2_3:42905395-42905414 | Msa0293000:intron | 50.0% | |
! | AACTGCAGCTCCTTTTACGC+TGG | - | chr2_3:42905751-42905770 | None:intergenic | 50.0% |
CTGTTAGGTTACCTTTGGCG+AGG | - | chr2_3:42905911-42905930 | None:intergenic | 50.0% | |
TGGAACAAGAGTGGCAGTGC+TGG | + | chr2_3:42905226-42905245 | Msa0293000:CDS | 55.0% | |
ACTTGCGCGCAGGGTTACTT+TGG | + | chr2_3:42905495-42905514 | Msa0293000:intron | 55.0% | |
TACGCTGGCAGCAATCAAGG+AGG | - | chr2_3:42905736-42905755 | None:intergenic | 55.0% | |
ACGCAATCGGCAGAGCAACT+TGG | + | chr2_3:42905867-42905886 | Msa0293000:CDS | 55.0% | |
GGCAGAGCAACTTGGAAAGC+CGG | + | chr2_3:42905875-42905894 | Msa0293000:CDS | 55.0% | |
ACTTGGAAAGCCGGCATGCA+CGG | + | chr2_3:42905884-42905903 | Msa0293000:CDS | 55.0% | |
TGGAACAAGAGTGGCAGTGC+TGG | + | chr2_3:42905226-42905245 | Msa0293000:CDS | 55.0% | |
ACTTGCGCGCAGGGTTACTT+TGG | + | chr2_3:42905495-42905514 | Msa0293000:intron | 55.0% | |
TACGCTGGCAGCAATCAAGG+AGG | - | chr2_3:42905736-42905755 | None:intergenic | 55.0% | |
ACGCAATCGGCAGAGCAACT+TGG | + | chr2_3:42905867-42905886 | Msa0293000:CDS | 55.0% | |
GGCAGAGCAACTTGGAAAGC+CGG | + | chr2_3:42905875-42905894 | Msa0293000:CDS | 55.0% | |
ACTTGGAAAGCCGGCATGCA+CGG | + | chr2_3:42905884-42905903 | Msa0293000:CDS | 55.0% | |
!! | ACAAGAGTGGCAGTGCTGGC+TGG | + | chr2_3:42905230-42905249 | Msa0293000:CDS | 60.0% |
CACCGGCCAGGGTTGAATCT+TGG | - | chr2_3:42905400-42905419 | None:intergenic | 60.0% | |
AGTAACCCTGCGCGCAAGTG+TGG | - | chr2_3:42905494-42905513 | None:intergenic | 60.0% | |
!! | ACAAGAGTGGCAGTGCTGGC+TGG | + | chr2_3:42905230-42905249 | Msa0293000:CDS | 60.0% |
CACCGGCCAGGGTTGAATCT+TGG | - | chr2_3:42905400-42905419 | None:intergenic | 60.0% | |
AGTAACCCTGCGCGCAAGTG+TGG | - | chr2_3:42905494-42905513 | None:intergenic | 60.0% | |
TTGGCGAGGTCCGTGCATGC+CGG | - | chr2_3:42905897-42905916 | None:intergenic | 65.0% | |
GCATGCACGGACCTCGCCAA+AGG | + | chr2_3:42905897-42905916 | Msa0293000:CDS | 65.0% | |
TTGGCGAGGTCCGTGCATGC+CGG | - | chr2_3:42905897-42905916 | None:intergenic | 65.0% | |
GCATGCACGGACCTCGCCAA+AGG | + | chr2_3:42905897-42905916 | Msa0293000:CDS | 65.0% | |
TGGGCTCCACACTTGCGCGC+AGG | + | chr2_3:42905485-42905504 | Msa0293000:intron | 70.0% | |
GGGCTCCACACTTGCGCGCA+GGG | + | chr2_3:42905486-42905505 | Msa0293000:intron | 70.0% | |
TGGGCTCCACACTTGCGCGC+AGG | + | chr2_3:42905485-42905504 | Msa0293000:intron | 70.0% | |
GGGCTCCACACTTGCGCGCA+GGG | + | chr2_3:42905486-42905505 | Msa0293000:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 42905200 | 42906428 | 42905200 | ID=Msa0293000;Name=Msa0293000 |
chr2_3 | mRNA | 42905200 | 42906428 | 42905200 | ID=Msa0293000-mRNA-1;Parent=Msa0293000;Name=Msa0293000-mRNA-1;_AED=0.00;_eAED=0.00;_QI=21|1|1|1|1|1|2|250|218 |
chr2_3 | exon | 42905200 | 42905328 | 42905200 | ID=Msa0293000-mRNA-1:exon:13680;Parent=Msa0293000-mRNA-1 |
chr2_3 | exon | 42905630 | 42906428 | 42905630 | ID=Msa0293000-mRNA-1:exon:13681;Parent=Msa0293000-mRNA-1 |
chr2_3 | five_prime_UTR | 42905200 | 42905220 | 42905200 | ID=Msa0293000-mRNA-1:five_prime_utr;Parent=Msa0293000-mRNA-1 |
chr2_3 | CDS | 42905221 | 42905328 | 42905221 | ID=Msa0293000-mRNA-1:cds;Parent=Msa0293000-mRNA-1 |
chr2_3 | CDS | 42905630 | 42906178 | 42905630 | ID=Msa0293000-mRNA-1:cds;Parent=Msa0293000-mRNA-1 |
chr2_3 | three_prime_UTR | 42906179 | 42906428 | 42906179 | ID=Msa0293000-mRNA-1:three_prime_utr;Parent=Msa0293000-mRNA-1 |
Gene Sequence |
Protein sequence |