AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1434780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1434780 MtrunA17_Chr5g0400141 99.184 245 1 1 1 245 1 244 2.96e-179 491
Msa1434780 MtrunA17_Chr4g0048231 27.083 192 129 4 21 208 8 192 1.13e-11 63.9
Msa1434780 MtrunA17_Chr7g0271811 26.291 213 144 5 21 226 73 279 3.53e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1434780 AT2G38740.1 70.870 230 67 0 11 240 12 241 2.45e-123 350
Msa1434780 AT1G56500.2 27.103 214 141 5 21 226 74 280 2.23e-13 69.7
Msa1434780 AT1G56500.1 27.103 214 141 5 21 226 74 280 2.52e-13 69.7
Msa1434780 AT4G21470.1 27.941 204 132 6 10 208 2 195 6.54e-12 65.1

Find 93 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATGCTGCCCACAATTT+TGG 0.109444 tig0027591:+27576 None:intergenic
TTCTTTCATGCTGTTATTAT+TGG 0.134310 tig0027591:-27894 Msa1434780:CDS
TTTCAAAGCAACACTGATTA+TGG 0.178476 tig0027591:+27404 None:intergenic
TCGTTGCAGGATTCTGTTTC+AGG 0.193983 tig0027591:-27711 Msa1434780:intron
CAGTAAATCCTCTGGGTTTC+GGG 0.200098 tig0027591:+27641 None:intergenic
AGACCTTTCAAGTAGGGTTC+TGG 0.300746 tig0027591:+27843 None:intergenic
TGCTTCAATTGGAGCAAGTT+TGG 0.305673 tig0027591:+28520 None:intergenic
GAGCAACTGAAGCCGTTAAA+TGG 0.315774 tig0027591:-28029 Msa1434780:CDS
GGCATGTGAATTTGATTCTT+TGG 0.325832 tig0027591:-29271 Msa1434780:five_prime_UTR
AAAGCCTGCCTTTCTGATAA+AGG 0.327178 tig0027591:-27610 Msa1434780:CDS
GTGCGACCGGCATAATTTCT+TGG 0.335993 tig0027591:-27510 Msa1434780:three_prime_UTR
TCAGTAAATCCTCTGGGTTT+CGG 0.346064 tig0027591:+27640 None:intergenic
GCTGCTGGGATGCCTGTTAT+TGG 0.354239 tig0027591:-27672 Msa1434780:CDS
TGAGAGAGAGTGAGGGAGGA+AGG 0.365956 tig0027591:-27297 Msa1434780:three_prime_UTR
TTTAAAGTTTGTAGAAGATA+AGG 0.369133 tig0027591:-28169 Msa1434780:CDS
CTATAAAGTATAAAGAATAA+TGG 0.379494 tig0027591:+27251 None:intergenic
TCCAAAATTGTGGGCAGCAT+TGG 0.379963 tig0027591:-27577 Msa1434780:CDS
GCTCCCATCAGTAAATCCTC+TGG 0.391301 tig0027591:+27633 None:intergenic
ATGAGTTCTGCATTTGGTCT+TGG 0.393932 tig0027591:+27942 None:intergenic
ACAAAATTATACAGGTAATC+TGG 0.395086 tig0027591:+27454 None:intergenic
TGCATTTGGTCTTGGAGCAT+TGG 0.395388 tig0027591:+27950 None:intergenic
TGAAGCTCTCAAAGCATCTA+AGG 0.401317 tig0027591:-27820 Msa1434780:CDS
CGGGTAGATATACCAATAAC+AGG 0.404855 tig0027591:+27660 None:intergenic
AGAGAGTGAGGGAGGAAGGG+AGG 0.410107 tig0027591:-27293 Msa1434780:three_prime_UTR
GAGAGAATGAGTTCTGCATT+TGG 0.417411 tig0027591:+27936 None:intergenic
TTTCACGAAAAGCATAATAG+TGG 0.419783 tig0027591:+28453 None:intergenic
TCAAACAGCACTGCTTCAAT+TGG 0.423109 tig0027591:+28509 None:intergenic
GCCTTGATAAAGTGAGGAAA+TGG 0.427010 tig0027591:-28007 Msa1434780:CDS
ATCAAAGCAGGAGTCGCTGC+TGG 0.427325 tig0027591:-27687 Msa1434780:CDS
ACTTTATCAAGGCCATTTAA+CGG 0.428311 tig0027591:+28017 None:intergenic
CGAAAAGCATAATAGTGGAT+TGG 0.428774 tig0027591:+28458 None:intergenic
GAAAAGCATAATAGTGGATT+GGG 0.432417 tig0027591:+28459 None:intergenic
GGATCACACATTTATATTTG+AGG 0.435509 tig0027591:-27799 Msa1434780:intron
GGTTGTCAGATTGGTTTCAA+TGG 0.438195 tig0027591:-28291 Msa1434780:intron
TTCAAGTAGGGTTCTGGATG+AGG 0.438758 tig0027591:+27849 None:intergenic
CCACACACGAAGCTAAACTA+TGG 0.440508 tig0027591:-29179 Msa1434780:exon
ATTGCCTTGGATCTCTTCCC+TGG 0.441811 tig0027591:-28207 Msa1434780:CDS
GGATCTCTTCCCTGGTGATC+GGG 0.441858 tig0027591:-28199 Msa1434780:CDS
TCCATTTCCTCACTTTATCA+AGG 0.442894 tig0027591:+28006 None:intergenic
TGGATCTCTTCCCTGGTGAT+CGG 0.444007 tig0027591:-28200 Msa1434780:CDS
TTACCTTTCGACGGAATTCT+CGG 0.446019 tig0027591:+29150 None:intergenic
GAGAGTGAGGGAGGAAGGGA+GGG 0.447743 tig0027591:-27292 Msa1434780:three_prime_UTR
CTCCCATCAGTAAATCCTCT+GGG 0.451240 tig0027591:+27634 None:intergenic
AAACCTCGTTCCCGATCACC+AGG 0.467601 tig0027591:+28189 None:intergenic
AAGATAAGGAAGCCATGTTT+CGG 0.470711 tig0027591:-28155 Msa1434780:CDS
TATTAAAGTAAAAGAATAAG+TGG 0.477288 tig0027591:-29308 Msa1434780:five_prime_UTR
TCACATGTATTGCAATTCCT+TGG 0.482605 tig0027591:+27317 None:intergenic
GAGAGAGAGTGAGGGAGGAA+GGG 0.491806 tig0027591:-27296 Msa1434780:three_prime_UTR
TTATACTTTACCACGACGAA+TGG 0.497432 tig0027591:+29242 None:intergenic
CCCCTGCAACAAAATTATAC+AGG 0.500332 tig0027591:+27446 None:intergenic
ATGTGAATTTGATTCTTTGG+CGG 0.501927 tig0027591:-29268 Msa1434780:five_prime_UTR
AATGTGATAGTTGGCAATGA+AGG 0.502789 tig0027591:-27346 Msa1434780:three_prime_UTR
TAATCCTTTATCAGAAAGGC+AGG 0.505843 tig0027591:+27606 None:intergenic
ATCATAATCCTTTATCAGAA+AGG 0.507299 tig0027591:+27602 None:intergenic
ATCATTGTGCTTGCCAGCAA+CGG 0.511684 tig0027591:+28233 None:intergenic
GCTTCAAGACCTTTCAAGTA+GGG 0.512510 tig0027591:+27837 None:intergenic
GAACTCATTCTCTCAAAACT+TGG 0.514892 tig0027591:-27927 Msa1434780:CDS
ATGAATGAATGAGAGAGGTT+AGG 0.516706 tig0027591:+29213 None:intergenic
TTGGAAGAACTTGACAAGTC+CGG 0.524640 tig0027591:-27558 Msa1434780:CDS
GCACAATGATGACATTGCCT+TGG 0.533662 tig0027591:-28220 Msa1434780:CDS
CATGTGAGAGAGAGTGAGGG+AGG 0.534460 tig0027591:-27301 Msa1434780:three_prime_UTR
ATTATGATGATCCAAAATTG+TGG 0.545112 tig0027591:-27587 Msa1434780:CDS
GTAGGGTTCTGGATGAGGCT+TGG 0.551862 tig0027591:+27854 None:intergenic
CATCCAGAACCCTACTTGAA+AGG 0.553649 tig0027591:-27846 Msa1434780:CDS
TCTGTTTCAGGAATCAAAGC+AGG 0.557269 tig0027591:-27699 Msa1434780:CDS
TAAGTGGGTGGCGGCATATG+CGG 0.559269 tig0027591:-29292 Msa1434780:five_prime_UTR
TGTCAGATTGGTTTCAATGG+AGG 0.559859 tig0027591:-28288 Msa1434780:intron
AACCCAGAGGATTTACTGAT+GGG 0.570236 tig0027591:-27636 Msa1434780:CDS
TTCCCTGGTGATCGGGAACG+AGG 0.572268 tig0027591:-28192 Msa1434780:CDS
TCAAAGCAGGAGTCGCTGCT+GGG 0.574198 tig0027591:-27686 Msa1434780:CDS
AAACCCAGAGGATTTACTGA+TGG 0.582964 tig0027591:-27637 Msa1434780:CDS
AATACATGTGAGAGAGAGTG+AGG 0.586139 tig0027591:-27305 Msa1434780:three_prime_UTR
AGCTTCAAGACCTTTCAAGT+AGG 0.587847 tig0027591:+27836 None:intergenic
GGCAATGAAGGTCAATGCCA+AGG 0.588147 tig0027591:-27334 Msa1434780:three_prime_UTR
AGGAAATGGATTGAAGATCG+TGG 0.589739 tig0027591:-27993 Msa1434780:CDS
ATTAAAGTAAAAGAATAAGT+GGG 0.592323 tig0027591:-29307 Msa1434780:five_prime_UTR
TAGGGTTTACCTCCGAAACA+TGG 0.604667 tig0027591:+28143 None:intergenic
AAGGAAGCGTTACCTTTCGA+CGG 0.608896 tig0027591:+29141 None:intergenic
GTAAAAGAATAAGTGGGTGG+CGG 0.612033 tig0027591:-29301 Msa1434780:five_prime_UTR
TGGAGGTAATCCTATAACAG+AGG 0.615734 tig0027591:-28271 Msa1434780:CDS
CCATAGTTTAGCTTCGTGTG+TGG 0.616267 tig0027591:+29179 None:intergenic
TTATGATGATCCAAAATTGT+GGG 0.617657 tig0027591:-27586 Msa1434780:CDS
AATGAATGAATGAATGAGAG+AGG 0.624716 tig0027591:+29208 None:intergenic
TAAATGGCCTTGATAAAGTG+AGG 0.625840 tig0027591:-28013 Msa1434780:CDS
CTTCCGAGAATTCCGTCGAA+AGG 0.626588 tig0027591:-29153 Msa1434780:intron
TTGGCGGATTCCATTCGTCG+TGG 0.639712 tig0027591:-29252 Msa1434780:five_prime_UTR
AAAGTAAAAGAATAAGTGGG+TGG 0.642601 tig0027591:-29304 Msa1434780:five_prime_UTR
ATAAGGAAGCCATGTTTCGG+AGG 0.643823 tig0027591:-28152 Msa1434780:intron
ATACATGTGAGAGAGAGTGA+GGG 0.649507 tig0027591:-27304 Msa1434780:three_prime_UTR
ATCACCAGGGAAGAGATCCA+AGG 0.667902 tig0027591:+28203 None:intergenic
GCAGTGCTGTTTGATATAGA+CGG 0.671189 tig0027591:-28500 Msa1434780:CDS
AACCTCGTTCCCGATCACCA+GGG 0.706366 tig0027591:+28190 None:intergenic
TATATCTACCCGAAACCCAG+AGG 0.748163 tig0027591:-27649 Msa1434780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATACTATAATATCTATT+TGG + tig0027591:28196-28215 None:intergenic 10.0%
!! TAAATACTATAATATCTATT+TGG + tig0027591:28196-28215 None:intergenic 10.0%
!! TATTAAAGTAAAAGAATAAG+TGG - tig0027591:27286-27305 Msa1434780:three_prime_UTR 15.0%
!! ATTAAAGTAAAAGAATAAGT+GGG - tig0027591:27287-27306 Msa1434780:three_prime_UTR 15.0%
!! ATCTTATTATCATGAAAAAT+AGG + tig0027591:27564-27583 None:intergenic 15.0%
!!! TTAACACTAAATATATTTTG+AGG + tig0027591:27687-27706 None:intergenic 15.0%
!!! TCATATTTTGTATAAAAGAA+TGG + tig0027591:27834-27853 None:intergenic 15.0%
!! TATTAGAAATTAACAAATGT+TGG - tig0027591:28279-28298 Msa1434780:CDS 15.0%
!! CTATAAAGTATAAAGAATAA+TGG + tig0027591:29346-29365 None:intergenic 15.0%
!! TATTAAAGTAAAAGAATAAG+TGG - tig0027591:27286-27305 Msa1434780:three_prime_UTR 15.0%
!! ATTAAAGTAAAAGAATAAGT+GGG - tig0027591:27287-27306 Msa1434780:three_prime_UTR 15.0%
!! ATCTTATTATCATGAAAAAT+AGG + tig0027591:27564-27583 None:intergenic 15.0%
!!! TTAACACTAAATATATTTTG+AGG + tig0027591:27687-27706 None:intergenic 15.0%
!!! TCATATTTTGTATAAAAGAA+TGG + tig0027591:27834-27853 None:intergenic 15.0%
!! TATTAGAAATTAACAAATGT+TGG - tig0027591:28279-28298 Msa1434780:CDS 15.0%
!! CTATAAAGTATAAAGAATAA+TGG + tig0027591:29346-29365 None:intergenic 15.0%
!!! TATTTTTCATAATTTGTCTG+CGG + tig0027591:27260-27279 None:intergenic 20.0%
!! AAATGAAATCAAGAATATGA+AGG + tig0027591:27475-27494 None:intergenic 20.0%
!!! CACAAAGATTTTAAGTTTAT+CGG + tig0027591:27941-27960 None:intergenic 20.0%
!! ATAAAAAATTCCTCTGTTAT+AGG + tig0027591:28336-28355 None:intergenic 20.0%
!!! TTTAAAGTTTGTAGAAGATA+AGG - tig0027591:28425-28444 Msa1434780:intron 20.0%
!! GAATAAGAACAAATTATCTA+AGG + tig0027591:28841-28860 None:intergenic 20.0%
!!! TTCAAAATTTTAATGAGAAC+CGG + tig0027591:29058-29077 None:intergenic 20.0%
!!! TTTTGTAATAATGTGATAGT+TGG - tig0027591:29239-29258 Msa1434780:five_prime_UTR 20.0%
!!! TATTTTTCATAATTTGTCTG+CGG + tig0027591:27260-27279 None:intergenic 20.0%
!! AAATGAAATCAAGAATATGA+AGG + tig0027591:27475-27494 None:intergenic 20.0%
!!! CACAAAGATTTTAAGTTTAT+CGG + tig0027591:27941-27960 None:intergenic 20.0%
!! ATAAAAAATTCCTCTGTTAT+AGG + tig0027591:28336-28355 None:intergenic 20.0%
!!! TTTAAAGTTTGTAGAAGATA+AGG - tig0027591:28425-28444 Msa1434780:intron 20.0%
!! GAATAAGAACAAATTATCTA+AGG + tig0027591:28841-28860 None:intergenic 20.0%
!!! TTCAAAATTTTAATGAGAAC+CGG + tig0027591:29058-29077 None:intergenic 20.0%
!!! TTTTGTAATAATGTGATAGT+TGG - tig0027591:29239-29258 Msa1434780:five_prime_UTR 20.0%
! ATCTATAGCAACTTAATTGA+TGG + tig0027591:27725-27744 None:intergenic 25.0%
! ATAAAAGAATGGAGATAACA+AGG + tig0027591:27823-27842 None:intergenic 25.0%
! TATCCTTACTTTATTCCAAA+GGG - tig0027591:27885-27904 Msa1434780:CDS 25.0%
! TATAAATTGGCATATGACTA+AGG - tig0027591:28242-28261 Msa1434780:CDS 25.0%
! TAGAAATTAACAAATGTTGG+TGG - tig0027591:28282-28301 Msa1434780:CDS 25.0%
! ATCTTGAAATTTAGCACAAT+GGG + tig0027591:28500-28519 None:intergenic 25.0%
! AATCTTGAAATTTAGCACAA+TGG + tig0027591:28501-28520 None:intergenic 25.0%
! TTCTTTCATGCTGTTATTAT+TGG - tig0027591:28700-28719 Msa1434780:intron 25.0%
! ATCATAATCCTTTATCAGAA+AGG + tig0027591:28995-29014 None:intergenic 25.0%
! ATTATGATGATCCAAAATTG+TGG - tig0027591:29007-29026 Msa1434780:intron 25.0%
! TTATGATGATCCAAAATTGT+GGG - tig0027591:29008-29027 Msa1434780:intron 25.0%
!! TTTTTACCAAGAAATTATGC+CGG + tig0027591:29093-29112 None:intergenic 25.0%
! ACAAAATTATACAGGTAATC+TGG + tig0027591:29143-29162 None:intergenic 25.0%
! ATCTATAGCAACTTAATTGA+TGG + tig0027591:27725-27744 None:intergenic 25.0%
! ATAAAAGAATGGAGATAACA+AGG + tig0027591:27823-27842 None:intergenic 25.0%
! TATCCTTACTTTATTCCAAA+GGG - tig0027591:27885-27904 Msa1434780:CDS 25.0%
! TATAAATTGGCATATGACTA+AGG - tig0027591:28242-28261 Msa1434780:CDS 25.0%
! TAGAAATTAACAAATGTTGG+TGG - tig0027591:28282-28301 Msa1434780:CDS 25.0%
! ATCTTGAAATTTAGCACAAT+GGG + tig0027591:28500-28519 None:intergenic 25.0%
! AATCTTGAAATTTAGCACAA+TGG + tig0027591:28501-28520 None:intergenic 25.0%
! TTCTTTCATGCTGTTATTAT+TGG - tig0027591:28700-28719 Msa1434780:intron 25.0%
! ATCATAATCCTTTATCAGAA+AGG + tig0027591:28995-29014 None:intergenic 25.0%
! ATTATGATGATCCAAAATTG+TGG - tig0027591:29007-29026 Msa1434780:intron 25.0%
! TTATGATGATCCAAAATTGT+GGG - tig0027591:29008-29027 Msa1434780:intron 25.0%
!! TTTTTACCAAGAAATTATGC+CGG + tig0027591:29093-29112 None:intergenic 25.0%
! ACAAAATTATACAGGTAATC+TGG + tig0027591:29143-29162 None:intergenic 25.0%
AAAGTAAAAGAATAAGTGGG+TGG - tig0027591:27290-27309 Msa1434780:three_prime_UTR 30.0%
ATGTGAATTTGATTCTTTGG+CGG - tig0027591:27326-27345 Msa1434780:three_prime_UTR 30.0%
AATGAATGAATGAATGAGAG+AGG + tig0027591:27389-27408 None:intergenic 30.0%
CCATCTTATAAAGAAACCAA+CGG + tig0027591:27754-27773 None:intergenic 30.0%
TATGAACTTCAAAGCAAGTA+AGG - tig0027591:27849-27868 Msa1434780:CDS 30.0%
ATAAAGTAAGGATAGATTCG+AGG + tig0027591:27879-27898 None:intergenic 30.0%
CTATCCTTACTTTATTCCAA+AGG - tig0027591:27884-27903 Msa1434780:CDS 30.0%
CTTAAAATCTTTGTGCTAAC+CGG - tig0027591:27946-27965 Msa1434780:CDS 30.0%
TGACACAACATGAAAGTAAT+GGG + tig0027591:28036-28055 None:intergenic 30.0%
!! GAAAAGCATAATAGTGGATT+GGG + tig0027591:28138-28157 None:intergenic 30.0%
! TTTCACGAAAAGCATAATAG+TGG + tig0027591:28144-28163 None:intergenic 30.0%
TCTTGAAATTTAGCACAATG+GGG + tig0027591:28499-28518 None:intergenic 30.0%
GAAACATATTTCCTTGATGA+TGG - tig0027591:28523-28542 Msa1434780:CDS 30.0%
ACTTTATCAAGGCCATTTAA+CGG + tig0027591:28580-28599 None:intergenic 30.0%
GGATCACACATTTATATTTG+AGG - tig0027591:28795-28814 Msa1434780:intron 30.0%
! TACCTGTATAATTTTGTTGC+AGG - tig0027591:29146-29165 Msa1434780:intron 30.0%
! ACCTGTATAATTTTGTTGCA+GGG - tig0027591:29147-29166 Msa1434780:intron 30.0%
! TTTCAAAGCAACACTGATTA+TGG + tig0027591:29193-29212 None:intergenic 30.0%
AAAGTAAAAGAATAAGTGGG+TGG - tig0027591:27290-27309 Msa1434780:three_prime_UTR 30.0%
ATGTGAATTTGATTCTTTGG+CGG - tig0027591:27326-27345 Msa1434780:three_prime_UTR 30.0%
AATGAATGAATGAATGAGAG+AGG + tig0027591:27389-27408 None:intergenic 30.0%
CCATCTTATAAAGAAACCAA+CGG + tig0027591:27754-27773 None:intergenic 30.0%
TATGAACTTCAAAGCAAGTA+AGG - tig0027591:27849-27868 Msa1434780:CDS 30.0%
ATAAAGTAAGGATAGATTCG+AGG + tig0027591:27879-27898 None:intergenic 30.0%
CTATCCTTACTTTATTCCAA+AGG - tig0027591:27884-27903 Msa1434780:CDS 30.0%
CTTAAAATCTTTGTGCTAAC+CGG - tig0027591:27946-27965 Msa1434780:CDS 30.0%
TGACACAACATGAAAGTAAT+GGG + tig0027591:28036-28055 None:intergenic 30.0%
!! GAAAAGCATAATAGTGGATT+GGG + tig0027591:28138-28157 None:intergenic 30.0%
! TTTCACGAAAAGCATAATAG+TGG + tig0027591:28144-28163 None:intergenic 30.0%
TCTTGAAATTTAGCACAATG+GGG + tig0027591:28499-28518 None:intergenic 30.0%
GAAACATATTTCCTTGATGA+TGG - tig0027591:28523-28542 Msa1434780:CDS 30.0%
ACTTTATCAAGGCCATTTAA+CGG + tig0027591:28580-28599 None:intergenic 30.0%
GGATCACACATTTATATTTG+AGG - tig0027591:28795-28814 Msa1434780:intron 30.0%
! TACCTGTATAATTTTGTTGC+AGG - tig0027591:29146-29165 Msa1434780:intron 30.0%
! ACCTGTATAATTTTGTTGCA+GGG - tig0027591:29147-29166 Msa1434780:intron 30.0%
! TTTCAAAGCAACACTGATTA+TGG + tig0027591:29193-29212 None:intergenic 30.0%
!! TTTTCATAATTTGTCTGCGG+AGG + tig0027591:27257-27276 None:intergenic 35.0%
GGCATGTGAATTTGATTCTT+TGG - tig0027591:27323-27342 Msa1434780:three_prime_UTR 35.0%
TTATACTTTACCACGACGAA+TGG + tig0027591:27355-27374 None:intergenic 35.0%
ATGAATGAATGAGAGAGGTT+AGG + tig0027591:27384-27403 None:intergenic 35.0%
!! TTTTGATCTTTAAGAGTGCG+AGG + tig0027591:27603-27622 None:intergenic 35.0%
ATTGAAGATGCACCCAATTT+AGG - tig0027591:27622-27641 Msa1434780:CDS 35.0%
TTGAAGATGCACCCAATTTA+GGG - tig0027591:27623-27642 Msa1434780:CDS 35.0%
! TTAGCAGAAGAAAGTGTGAA+TGG + tig0027591:27661-27680 None:intergenic 35.0%
TGCTATAGATATATTGCCGT+TGG - tig0027591:27735-27754 Msa1434780:intron 35.0%
!! CCGTTGGTTTCTTTATAAGA+TGG - tig0027591:27751-27770 Msa1434780:intron 35.0%
TCTTTATAAGATGGCATTCG+AGG - tig0027591:27760-27779 Msa1434780:intron 35.0%
TCTAGACTATATGGCCATAA+AGG + tig0027591:27793-27812 None:intergenic 35.0%
AACTTCAAAGCAAGTAAGGT+AGG - tig0027591:27853-27872 Msa1434780:CDS 35.0%
!! GTTCCCTTTGGAATAAAGTA+AGG + tig0027591:27891-27910 None:intergenic 35.0%
GATTTCAAGAAAGTTCCCTT+TGG + tig0027591:27903-27922 None:intergenic 35.0%
AATCAACTCATGTCATGAAC+CGG + tig0027591:27968-27987 None:intergenic 35.0%
CTGACACAACATGAAAGTAA+TGG + tig0027591:28037-28056 None:intergenic 35.0%
!! CGAAAAGCATAATAGTGGAT+TGG + tig0027591:28139-28158 None:intergenic 35.0%
! TTTTCGTGAAATGCTTCAAG+AGG - tig0027591:28153-28172 Msa1434780:CDS 35.0%
AAGATAAGGAAGCCATGTTT+CGG - tig0027591:28439-28458 Msa1434780:intron 35.0%
ATCTAGATAGTCCATCATCA+AGG + tig0027591:28537-28556 None:intergenic 35.0%
! TAAATGGCCTTGATAAAGTG+AGG - tig0027591:28581-28600 Msa1434780:intron 35.0%
TCCATTTCCTCACTTTATCA+AGG + tig0027591:28591-28610 None:intergenic 35.0%
GAACTCATTCTCTCAAAACT+TGG - tig0027591:28667-28686 Msa1434780:intron 35.0%
TGTTCTTATTCTGCTTCTGA+CGG - tig0027591:28850-28869 Msa1434780:intron 35.0%
TAATCCTTTATCAGAAAGGC+AGG + tig0027591:28991-29010 None:intergenic 35.0%
! TTTTGAATTACTAGTGCGAC+CGG - tig0027591:29071-29090 Msa1434780:intron 35.0%
! CCTGTATAATTTTGTTGCAG+GGG - tig0027591:29148-29167 Msa1434780:intron 35.0%
! CTGTATAATTTTGTTGCAGG+GGG - tig0027591:29149-29168 Msa1434780:intron 35.0%
AATGTGATAGTTGGCAATGA+AGG - tig0027591:29248-29267 Msa1434780:five_prime_UTR 35.0%
TCACATGTATTGCAATTCCT+TGG + tig0027591:29280-29299 None:intergenic 35.0%
GGAGGACAAAATTATAGACT+AGG + tig0027591:27239-27258 None:intergenic 35.0%
!! TTTTCATAATTTGTCTGCGG+AGG + tig0027591:27257-27276 None:intergenic 35.0%
GGCATGTGAATTTGATTCTT+TGG - tig0027591:27323-27342 Msa1434780:three_prime_UTR 35.0%
TTATACTTTACCACGACGAA+TGG + tig0027591:27355-27374 None:intergenic 35.0%
ATGAATGAATGAGAGAGGTT+AGG + tig0027591:27384-27403 None:intergenic 35.0%
!! TTTTGATCTTTAAGAGTGCG+AGG + tig0027591:27603-27622 None:intergenic 35.0%
ATTGAAGATGCACCCAATTT+AGG - tig0027591:27622-27641 Msa1434780:CDS 35.0%
TTGAAGATGCACCCAATTTA+GGG - tig0027591:27623-27642 Msa1434780:CDS 35.0%
! TTAGCAGAAGAAAGTGTGAA+TGG + tig0027591:27661-27680 None:intergenic 35.0%
TGCTATAGATATATTGCCGT+TGG - tig0027591:27735-27754 Msa1434780:intron 35.0%
!! CCGTTGGTTTCTTTATAAGA+TGG - tig0027591:27751-27770 Msa1434780:intron 35.0%
TCTTTATAAGATGGCATTCG+AGG - tig0027591:27760-27779 Msa1434780:intron 35.0%
TCTAGACTATATGGCCATAA+AGG + tig0027591:27793-27812 None:intergenic 35.0%
AACTTCAAAGCAAGTAAGGT+AGG - tig0027591:27853-27872 Msa1434780:CDS 35.0%
!! GTTCCCTTTGGAATAAAGTA+AGG + tig0027591:27891-27910 None:intergenic 35.0%
GATTTCAAGAAAGTTCCCTT+TGG + tig0027591:27903-27922 None:intergenic 35.0%
AATCAACTCATGTCATGAAC+CGG + tig0027591:27968-27987 None:intergenic 35.0%
CTGACACAACATGAAAGTAA+TGG + tig0027591:28037-28056 None:intergenic 35.0%
!! CGAAAAGCATAATAGTGGAT+TGG + tig0027591:28139-28158 None:intergenic 35.0%
! TTTTCGTGAAATGCTTCAAG+AGG - tig0027591:28153-28172 Msa1434780:CDS 35.0%
AAGATAAGGAAGCCATGTTT+CGG - tig0027591:28439-28458 Msa1434780:intron 35.0%
ATCTAGATAGTCCATCATCA+AGG + tig0027591:28537-28556 None:intergenic 35.0%
! TAAATGGCCTTGATAAAGTG+AGG - tig0027591:28581-28600 Msa1434780:intron 35.0%
TCCATTTCCTCACTTTATCA+AGG + tig0027591:28591-28610 None:intergenic 35.0%
GAACTCATTCTCTCAAAACT+TGG - tig0027591:28667-28686 Msa1434780:intron 35.0%
TGTTCTTATTCTGCTTCTGA+CGG - tig0027591:28850-28869 Msa1434780:intron 35.0%
TAATCCTTTATCAGAAAGGC+AGG + tig0027591:28991-29010 None:intergenic 35.0%
! TTTTGAATTACTAGTGCGAC+CGG - tig0027591:29071-29090 Msa1434780:intron 35.0%
! CCTGTATAATTTTGTTGCAG+GGG - tig0027591:29148-29167 Msa1434780:intron 35.0%
! CTGTATAATTTTGTTGCAGG+GGG - tig0027591:29149-29168 Msa1434780:intron 35.0%
AATGTGATAGTTGGCAATGA+AGG - tig0027591:29248-29267 Msa1434780:five_prime_UTR 35.0%
TCACATGTATTGCAATTCCT+TGG + tig0027591:29280-29299 None:intergenic 35.0%
GTAAAAGAATAAGTGGGTGG+CGG - tig0027591:27293-27312 Msa1434780:three_prime_UTR 40.0%
TTACCTTTCGACGGAATTCT+CGG + tig0027591:27447-27466 None:intergenic 40.0%
TCACTGCAGATCCCTAAATT+GGG + tig0027591:27637-27656 None:intergenic 40.0%
TTCACTGCAGATCCCTAAAT+TGG + tig0027591:27638-27657 None:intergenic 40.0%
TTCGAGGCATAGAACCTTTA+TGG - tig0027591:27776-27795 Msa1434780:intron 40.0%
GGACAGAACTCTAGACTATA+TGG + tig0027591:27802-27821 None:intergenic 40.0%
TGCTTCAATTGGAGCAAGTT+TGG + tig0027591:28077-28096 None:intergenic 40.0%
TCAAACAGCACTGCTTCAAT+TGG + tig0027591:28088-28107 None:intergenic 40.0%
!! GCAGTGCTGTTTGATATAGA+CGG - tig0027591:28094-28113 Msa1434780:intron 40.0%
!! AATGTTGGTGGTTGTCAGAT+TGG - tig0027591:28294-28313 Msa1434780:intron 40.0%
!! GGTTGTCAGATTGGTTTCAA+TGG - tig0027591:28303-28322 Msa1434780:intron 40.0%
!! TGTCAGATTGGTTTCAATGG+AGG - tig0027591:28306-28325 Msa1434780:intron 40.0%
TGGAGGTAATCCTATAACAG+AGG - tig0027591:28323-28342 Msa1434780:intron 40.0%
!!! TTTTTTATTGCGACCGTTGC+TGG - tig0027591:28348-28367 Msa1434780:intron 40.0%
AGCACAATGGGGATATAGTT+CGG + tig0027591:28488-28507 None:intergenic 40.0%
GCCTTGATAAAGTGAGGAAA+TGG - tig0027591:28587-28606 Msa1434780:intron 40.0%
!! AGGAAATGGATTGAAGATCG+TGG - tig0027591:28601-28620 Msa1434780:intron 40.0%
ATGAGTTCTGCATTTGGTCT+TGG + tig0027591:28655-28674 None:intergenic 40.0%
GAGAGAATGAGTTCTGCATT+TGG + tig0027591:28661-28680 None:intergenic 40.0%
! GCTTCAAGACCTTTCAAGTA+GGG + tig0027591:28760-28779 None:intergenic 40.0%
! AGCTTCAAGACCTTTCAAGT+AGG + tig0027591:28761-28780 None:intergenic 40.0%
! TGAAGCTCTCAAAGCATCTA+AGG - tig0027591:28774-28793 Msa1434780:intron 40.0%
TCTGTTTCAGGAATCAAAGC+AGG - tig0027591:28895-28914 Msa1434780:intron 40.0%
CGGGTAGATATACCAATAAC+AGG + tig0027591:28937-28956 None:intergenic 40.0%
TCAGTAAATCCTCTGGGTTT+CGG + tig0027591:28957-28976 None:intergenic 40.0%
AAACCCAGAGGATTTACTGA+TGG - tig0027591:28957-28976 Msa1434780:intron 40.0%
AACCCAGAGGATTTACTGAT+GGG - tig0027591:28958-28977 Msa1434780:intron 40.0%
AAAGCCTGCCTTTCTGATAA+AGG - tig0027591:28984-29003 Msa1434780:intron 40.0%
TTGGAAGAACTTGACAAGTC+CGG - tig0027591:29036-29055 Msa1434780:intron 40.0%
CCCCTGCAACAAAATTATAC+AGG + tig0027591:29151-29170 None:intergenic 40.0%
AATACATGTGAGAGAGAGTG+AGG - tig0027591:29289-29308 Msa1434780:five_prime_UTR 40.0%
ATACATGTGAGAGAGAGTGA+GGG - tig0027591:29290-29309 Msa1434780:five_prime_UTR 40.0%
GTAAAAGAATAAGTGGGTGG+CGG - tig0027591:27293-27312 Msa1434780:three_prime_UTR 40.0%
TTACCTTTCGACGGAATTCT+CGG + tig0027591:27447-27466 None:intergenic 40.0%
TCACTGCAGATCCCTAAATT+GGG + tig0027591:27637-27656 None:intergenic 40.0%
TTCACTGCAGATCCCTAAAT+TGG + tig0027591:27638-27657 None:intergenic 40.0%
TTCGAGGCATAGAACCTTTA+TGG - tig0027591:27776-27795 Msa1434780:intron 40.0%
GGACAGAACTCTAGACTATA+TGG + tig0027591:27802-27821 None:intergenic 40.0%
TGCTTCAATTGGAGCAAGTT+TGG + tig0027591:28077-28096 None:intergenic 40.0%
TCAAACAGCACTGCTTCAAT+TGG + tig0027591:28088-28107 None:intergenic 40.0%
!! GCAGTGCTGTTTGATATAGA+CGG - tig0027591:28094-28113 Msa1434780:intron 40.0%
!! AATGTTGGTGGTTGTCAGAT+TGG - tig0027591:28294-28313 Msa1434780:intron 40.0%
!! GGTTGTCAGATTGGTTTCAA+TGG - tig0027591:28303-28322 Msa1434780:intron 40.0%
!! TGTCAGATTGGTTTCAATGG+AGG - tig0027591:28306-28325 Msa1434780:intron 40.0%
TGGAGGTAATCCTATAACAG+AGG - tig0027591:28323-28342 Msa1434780:intron 40.0%
!!! TTTTTTATTGCGACCGTTGC+TGG - tig0027591:28348-28367 Msa1434780:intron 40.0%
AGCACAATGGGGATATAGTT+CGG + tig0027591:28488-28507 None:intergenic 40.0%
GCCTTGATAAAGTGAGGAAA+TGG - tig0027591:28587-28606 Msa1434780:intron 40.0%
!! AGGAAATGGATTGAAGATCG+TGG - tig0027591:28601-28620 Msa1434780:intron 40.0%
ATGAGTTCTGCATTTGGTCT+TGG + tig0027591:28655-28674 None:intergenic 40.0%
GAGAGAATGAGTTCTGCATT+TGG + tig0027591:28661-28680 None:intergenic 40.0%
! GCTTCAAGACCTTTCAAGTA+GGG + tig0027591:28760-28779 None:intergenic 40.0%
! AGCTTCAAGACCTTTCAAGT+AGG + tig0027591:28761-28780 None:intergenic 40.0%
! TGAAGCTCTCAAAGCATCTA+AGG - tig0027591:28774-28793 Msa1434780:intron 40.0%
TCTGTTTCAGGAATCAAAGC+AGG - tig0027591:28895-28914 Msa1434780:intron 40.0%
CGGGTAGATATACCAATAAC+AGG + tig0027591:28937-28956 None:intergenic 40.0%
TCAGTAAATCCTCTGGGTTT+CGG + tig0027591:28957-28976 None:intergenic 40.0%
AAACCCAGAGGATTTACTGA+TGG - tig0027591:28957-28976 Msa1434780:intron 40.0%
AACCCAGAGGATTTACTGAT+GGG - tig0027591:28958-28977 Msa1434780:intron 40.0%
AAAGCCTGCCTTTCTGATAA+AGG - tig0027591:28984-29003 Msa1434780:intron 40.0%
TTGGAAGAACTTGACAAGTC+CGG - tig0027591:29036-29055 Msa1434780:intron 40.0%
CCCCTGCAACAAAATTATAC+AGG + tig0027591:29151-29170 None:intergenic 40.0%
AATACATGTGAGAGAGAGTG+AGG - tig0027591:29289-29308 Msa1434780:five_prime_UTR 40.0%
ATACATGTGAGAGAGAGTGA+GGG - tig0027591:29290-29309 Msa1434780:five_prime_UTR 40.0%
! CCATAGTTTAGCTTCGTGTG+TGG + tig0027591:27418-27437 None:intergenic 45.0%
CCACACACGAAGCTAAACTA+TGG - tig0027591:27415-27434 Msa1434780:three_prime_UTR 45.0%
!! AAGGAAGCGTTACCTTTCGA+CGG + tig0027591:27456-27475 None:intergenic 45.0%
ATCATTGTGCTTGCCAGCAA+CGG + tig0027591:28364-28383 None:intergenic 45.0%
GCACAATGATGACATTGCCT+TGG - tig0027591:28374-28393 Msa1434780:intron 45.0%
ATAAGGAAGCCATGTTTCGG+AGG - tig0027591:28442-28461 Msa1434780:CDS 45.0%
TAGGGTTTACCTCCGAAACA+TGG + tig0027591:28454-28473 None:intergenic 45.0%
ACAATGGGGATATAGTTCGG+GGG + tig0027591:28485-28504 None:intergenic 45.0%
CACAATGGGGATATAGTTCG+GGG + tig0027591:28486-28505 None:intergenic 45.0%
GCACAATGGGGATATAGTTC+GGG + tig0027591:28487-28506 None:intergenic 45.0%
GAGCAACTGAAGCCGTTAAA+TGG - tig0027591:28565-28584 Msa1434780:intron 45.0%
!! TGCATTTGGTCTTGGAGCAT+TGG + tig0027591:28647-28666 None:intergenic 45.0%
!! TTCAAGTAGGGTTCTGGATG+AGG + tig0027591:28748-28767 None:intergenic 45.0%
CATCCAGAACCCTACTTGAA+AGG - tig0027591:28748-28767 Msa1434780:intron 45.0%
! AGACCTTTCAAGTAGGGTTC+TGG + tig0027591:28754-28773 None:intergenic 45.0%
GAATCCTGCAACGACAAAAC+AGG + tig0027591:28877-28896 None:intergenic 45.0%
TCGTTGCAGGATTCTGTTTC+AGG - tig0027591:28883-28902 Msa1434780:intron 45.0%
TATATCTACCCGAAACCCAG+AGG - tig0027591:28945-28964 Msa1434780:intron 45.0%
CAGTAAATCCTCTGGGTTTC+GGG + tig0027591:28956-28975 None:intergenic 45.0%
CTCCCATCAGTAAATCCTCT+GGG + tig0027591:28963-28982 None:intergenic 45.0%
TCCAAAATTGTGGGCAGCAT+TGG - tig0027591:29017-29036 Msa1434780:intron 45.0%
! TCCAATGCTGCCCACAATTT+TGG + tig0027591:29021-29040 None:intergenic 45.0%
! CCATAGTTTAGCTTCGTGTG+TGG + tig0027591:27418-27437 None:intergenic 45.0%
CCACACACGAAGCTAAACTA+TGG - tig0027591:27415-27434 Msa1434780:three_prime_UTR 45.0%
!! AAGGAAGCGTTACCTTTCGA+CGG + tig0027591:27456-27475 None:intergenic 45.0%
ATCATTGTGCTTGCCAGCAA+CGG + tig0027591:28364-28383 None:intergenic 45.0%
GCACAATGATGACATTGCCT+TGG - tig0027591:28374-28393 Msa1434780:intron 45.0%
ATAAGGAAGCCATGTTTCGG+AGG - tig0027591:28442-28461 Msa1434780:CDS 45.0%
TAGGGTTTACCTCCGAAACA+TGG + tig0027591:28454-28473 None:intergenic 45.0%
ACAATGGGGATATAGTTCGG+GGG + tig0027591:28485-28504 None:intergenic 45.0%
CACAATGGGGATATAGTTCG+GGG + tig0027591:28486-28505 None:intergenic 45.0%
GCACAATGGGGATATAGTTC+GGG + tig0027591:28487-28506 None:intergenic 45.0%
GAGCAACTGAAGCCGTTAAA+TGG - tig0027591:28565-28584 Msa1434780:intron 45.0%
!! TGCATTTGGTCTTGGAGCAT+TGG + tig0027591:28647-28666 None:intergenic 45.0%
!! TTCAAGTAGGGTTCTGGATG+AGG + tig0027591:28748-28767 None:intergenic 45.0%
CATCCAGAACCCTACTTGAA+AGG - tig0027591:28748-28767 Msa1434780:intron 45.0%
! AGACCTTTCAAGTAGGGTTC+TGG + tig0027591:28754-28773 None:intergenic 45.0%
GAATCCTGCAACGACAAAAC+AGG + tig0027591:28877-28896 None:intergenic 45.0%
TCGTTGCAGGATTCTGTTTC+AGG - tig0027591:28883-28902 Msa1434780:intron 45.0%
TATATCTACCCGAAACCCAG+AGG - tig0027591:28945-28964 Msa1434780:intron 45.0%
CAGTAAATCCTCTGGGTTTC+GGG + tig0027591:28956-28975 None:intergenic 45.0%
CTCCCATCAGTAAATCCTCT+GGG + tig0027591:28963-28982 None:intergenic 45.0%
TCCAAAATTGTGGGCAGCAT+TGG - tig0027591:29017-29036 Msa1434780:intron 45.0%
! TCCAATGCTGCCCACAATTT+TGG + tig0027591:29021-29040 None:intergenic 45.0%
!! TTTATTGAATTATTATAAAT+TGG - tig0027591:28229-28248 Msa1434780:CDS 5.0%
!! TTTATTGAATTATTATAAAT+TGG - tig0027591:28229-28248 Msa1434780:CDS 5.0%
CTTCCGAGAATTCCGTCGAA+AGG - tig0027591:27441-27460 Msa1434780:three_prime_UTR 50.0%
ATTGCCTTGGATCTCTTCCC+TGG - tig0027591:28387-28406 Msa1434780:intron 50.0%
ATCACCAGGGAAGAGATCCA+AGG + tig0027591:28394-28413 None:intergenic 50.0%
TGGATCTCTTCCCTGGTGAT+CGG - tig0027591:28394-28413 Msa1434780:intron 50.0%
CAATGGGGATATAGTTCGGG+GGG + tig0027591:28484-28503 None:intergenic 50.0%
GCTCCCATCAGTAAATCCTC+TGG + tig0027591:28964-28983 None:intergenic 50.0%
GTGCGACCGGCATAATTTCT+TGG - tig0027591:29084-29103 Msa1434780:intron 50.0%
GGCAATGAAGGTCAATGCCA+AGG - tig0027591:29260-29279 Msa1434780:five_prime_UTR 50.0%
CTTCCGAGAATTCCGTCGAA+AGG - tig0027591:27441-27460 Msa1434780:three_prime_UTR 50.0%
ATTGCCTTGGATCTCTTCCC+TGG - tig0027591:28387-28406 Msa1434780:intron 50.0%
ATCACCAGGGAAGAGATCCA+AGG + tig0027591:28394-28413 None:intergenic 50.0%
TGGATCTCTTCCCTGGTGAT+CGG - tig0027591:28394-28413 Msa1434780:intron 50.0%
CAATGGGGATATAGTTCGGG+GGG + tig0027591:28484-28503 None:intergenic 50.0%
GCTCCCATCAGTAAATCCTC+TGG + tig0027591:28964-28983 None:intergenic 50.0%
GTGCGACCGGCATAATTTCT+TGG - tig0027591:29084-29103 Msa1434780:intron 50.0%
GGCAATGAAGGTCAATGCCA+AGG - tig0027591:29260-29279 Msa1434780:five_prime_UTR 50.0%
! TAAGTGGGTGGCGGCATATG+CGG - tig0027591:27302-27321 Msa1434780:three_prime_UTR 55.0%
!! TTGGCGGATTCCATTCGTCG+TGG - tig0027591:27342-27361 Msa1434780:three_prime_UTR 55.0%
GGATCTCTTCCCTGGTGATC+GGG - tig0027591:28395-28414 Msa1434780:intron 55.0%
AACCTCGTTCCCGATCACCA+GGG + tig0027591:28407-28426 None:intergenic 55.0%
AAACCTCGTTCCCGATCACC+AGG + tig0027591:28408-28427 None:intergenic 55.0%
!! GTAGGGTTCTGGATGAGGCT+TGG + tig0027591:28743-28762 None:intergenic 55.0%
! CGGACCTGTTTTGTCGTTGC+AGG - tig0027591:28870-28889 Msa1434780:intron 55.0%
ATCAAAGCAGGAGTCGCTGC+TGG - tig0027591:28907-28926 Msa1434780:intron 55.0%
TCAAAGCAGGAGTCGCTGCT+GGG - tig0027591:28908-28927 Msa1434780:intron 55.0%
GCTGCTGGGATGCCTGTTAT+TGG - tig0027591:28922-28941 Msa1434780:intron 55.0%
CATGTGAGAGAGAGTGAGGG+AGG - tig0027591:29293-29312 Msa1434780:five_prime_UTR 55.0%
TGAGAGAGAGTGAGGGAGGA+AGG - tig0027591:29297-29316 Msa1434780:five_prime_UTR 55.0%
GAGAGAGAGTGAGGGAGGAA+GGG - tig0027591:29298-29317 Msa1434780:five_prime_UTR 55.0%
! TAAGTGGGTGGCGGCATATG+CGG - tig0027591:27302-27321 Msa1434780:three_prime_UTR 55.0%
!! TTGGCGGATTCCATTCGTCG+TGG - tig0027591:27342-27361 Msa1434780:three_prime_UTR 55.0%
GGATCTCTTCCCTGGTGATC+GGG - tig0027591:28395-28414 Msa1434780:intron 55.0%
AACCTCGTTCCCGATCACCA+GGG + tig0027591:28407-28426 None:intergenic 55.0%
AAACCTCGTTCCCGATCACC+AGG + tig0027591:28408-28427 None:intergenic 55.0%
!! GTAGGGTTCTGGATGAGGCT+TGG + tig0027591:28743-28762 None:intergenic 55.0%
! CGGACCTGTTTTGTCGTTGC+AGG - tig0027591:28870-28889 Msa1434780:intron 55.0%
ATCAAAGCAGGAGTCGCTGC+TGG - tig0027591:28907-28926 Msa1434780:intron 55.0%
TCAAAGCAGGAGTCGCTGCT+GGG - tig0027591:28908-28927 Msa1434780:intron 55.0%
GCTGCTGGGATGCCTGTTAT+TGG - tig0027591:28922-28941 Msa1434780:intron 55.0%
CATGTGAGAGAGAGTGAGGG+AGG - tig0027591:29293-29312 Msa1434780:five_prime_UTR 55.0%
TGAGAGAGAGTGAGGGAGGA+AGG - tig0027591:29297-29316 Msa1434780:five_prime_UTR 55.0%
GAGAGAGAGTGAGGGAGGAA+GGG - tig0027591:29298-29317 Msa1434780:five_prime_UTR 55.0%
TTCCCTGGTGATCGGGAACG+AGG - tig0027591:28402-28421 Msa1434780:intron 60.0%
AGTTCGGGGGGAGGTGAGTA+GGG + tig0027591:28472-28491 None:intergenic 60.0%
TAGTTCGGGGGGAGGTGAGT+AGG + tig0027591:28473-28492 None:intergenic 60.0%
TGGGGATATAGTTCGGGGGG+AGG + tig0027591:28481-28500 None:intergenic 60.0%
AGAGAGTGAGGGAGGAAGGG+AGG - tig0027591:29301-29320 Msa1434780:five_prime_UTR 60.0%
GAGAGTGAGGGAGGAAGGGA+GGG - tig0027591:29302-29321 Msa1434780:five_prime_UTR 60.0%
TTCCCTGGTGATCGGGAACG+AGG - tig0027591:28402-28421 Msa1434780:intron 60.0%
AGTTCGGGGGGAGGTGAGTA+GGG + tig0027591:28472-28491 None:intergenic 60.0%
TAGTTCGGGGGGAGGTGAGT+AGG + tig0027591:28473-28492 None:intergenic 60.0%
TGGGGATATAGTTCGGGGGG+AGG + tig0027591:28481-28500 None:intergenic 60.0%
AGAGAGTGAGGGAGGAAGGG+AGG - tig0027591:29301-29320 Msa1434780:five_prime_UTR 60.0%
GAGAGTGAGGGAGGAAGGGA+GGG - tig0027591:29302-29321 Msa1434780:five_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
tig0027591 gene 27237 29379 27237 ID=Msa1434780;Name=Msa1434780
tig0027591 mRNA 27237 29379 27237 ID=Msa1434780-mRNA-1;Parent=Msa1434780;Name=Msa1434780-mRNA-1;_AED=0.05;_eAED=0.05;_QI=197|0.75|0.8|1|1|1|5|311|245
tig0027591 exon 27237 27724 27237 ID=Msa1434780-mRNA-1:exon:9357;Parent=Msa1434780-mRNA-1
tig0027591 exon 27800 28061 27800 ID=Msa1434780-mRNA-1:exon:9356;Parent=Msa1434780-mRNA-1
tig0027591 exon 28153 28304 28153 ID=Msa1434780-mRNA-1:exon:9355;Parent=Msa1434780-mRNA-1
tig0027591 exon 28442 28559 28442 ID=Msa1434780-mRNA-1:exon:9354;Parent=Msa1434780-mRNA-1
tig0027591 exon 29154 29379 29154 ID=Msa1434780-mRNA-1:exon:9353;Parent=Msa1434780-mRNA-1
tig0027591 five_prime_UTR 29183 29379 29183 ID=Msa1434780-mRNA-1:five_prime_utr;Parent=Msa1434780-mRNA-1
tig0027591 CDS 29154 29182 29154 ID=Msa1434780-mRNA-1:cds;Parent=Msa1434780-mRNA-1
tig0027591 CDS 28442 28559 28442 ID=Msa1434780-mRNA-1:cds;Parent=Msa1434780-mRNA-1
tig0027591 CDS 28153 28304 28153 ID=Msa1434780-mRNA-1:cds;Parent=Msa1434780-mRNA-1
tig0027591 CDS 27800 28061 27800 ID=Msa1434780-mRNA-1:cds;Parent=Msa1434780-mRNA-1
tig0027591 CDS 27548 27724 27548 ID=Msa1434780-mRNA-1:cds;Parent=Msa1434780-mRNA-1
tig0027591 three_prime_UTR 27237 27547 27237 ID=Msa1434780-mRNA-1:three_prime_utr;Parent=Msa1434780-mRNA-1
Gene Sequence

>Msa1434780

ATGGCTACTTCCGAGAATTCCGTCGAAAGCAGCAAGAGTTCTCTTACCAAACTTGCTCCAATTGAAGCAGTGCTGTTTGATATAGACGGAACTCTTTGTGATTCTGACCCAATCCACTATTATGCTTTTCGTGAAATGCTTCAAGAGATTGGTTTCAATGGAGGTAATCCTATAACAGAGGAATTTTTTATTGCGACCGTTGCTGGCAAGCACAATGATGACATTGCCTTGGATCTCTTCCCTGGTGATCGGGAACGAGGTTTAAAGTTTGTAGAAGATAAGGAAGCCATGTTTCGGAGATTAGCAGCTGAGCAACTGAAGCCGTTAAATGGCCTTGATAAAGTGAGGAAATGGATTGAAGATCGTGGATTGAAGCGAGCTGCAGTTACCAATGCTCCAAGACCAAATGCAGAACTCATTCTCTCAAAACTTGGTCTCTCAGATTTCTTTCATGCTGTTATTATTGGTGATGAATGTGAACATGCCAAGCCTCATCCAGAACCCTACTTGAAAGGTCTTGAAGCTCTCAAAGCATCTAAGGATCACACATTTATATTTGAGGATTCTGTTTCAGGAATCAAAGCAGGAGTCGCTGCTGGGATGCCTGTTATTGGTATATCTACCCGAAACCCAGAGGATTTACTGATGGGAGCAAAGCCTGCCTTTCTGATAAAGGATTATGATGATCCAAAATTGTGGGCAGCATTGGAAGAACTTGACAAGTCCGGTTCTCATTAA
Protein sequence

>Msa1434780

MATSENSVESSKSSLTKLAPIEAVLFDIDGTLCDSDPIHYYAFREMLQEIGFNGGNPITEEFFIATVAGKHNDDIALDLFPGDRERGLKFVEDKEAMFRRLAAEQLKPLNGLDKVRKWIEDRGLKRAAVTNAPRPNAELILSKLGLSDFFHAVIIGDECEHAKPHPEPYLKGLEALKASKDHTFIFEDSVSGIKAGVAAGMPVIGISTRNPEDLLMGAKPAFLIKDYDDPKLWAALEELDKSGSH*