Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757910 | G7KDL9 | 91.803 | 305 | 25 | 0 | 1 | 305 | 1 | 305 | 0.0 | 582 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0640880 | Msa0757910 | 0.802940 | 4.420636e-49 | -8.615850e-47 |
| Msa0688540 | Msa0757910 | 0.843910 | 1.047892e-58 | -8.615850e-47 |
| Msa0716790 | Msa0757910 | 0.830500 | 2.835307e-55 | -8.615850e-47 |
| Msa0757910 | Msa0799210 | 0.842421 | 2.613483e-58 | -8.615850e-47 |
| Msa0757910 | Msa0803130 | 0.801663 | 8.096794e-49 | -8.615850e-47 |
| Msa0757910 | Msa0931610 | 0.818392 | 2.007757e-52 | -8.615850e-47 |
| Msa0757910 | Msa1004500 | 0.827030 | 1.959596e-54 | -8.615850e-47 |
| Msa0757910 | Msa1004520 | 0.816333 | 5.838552e-52 | -8.615850e-47 |
| Msa0757910 | Msa1046870 | 0.824546 | 7.612169e-54 | -8.615850e-47 |
| Msa0139900 | Msa0757910 | 0.826284 | 2.952533e-54 | -8.615850e-47 |
| Msa0274780 | Msa0757910 | 0.808925 | 2.436680e-50 | -8.615850e-47 |
| Msa0297920 | Msa0757910 | 0.825276 | 5.120214e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757910 | MtrunA17_Chr5g0404211 | 91.803 | 305 | 25 | 0 | 1 | 305 | 1 | 305 | 0.0 | 582 |
| Msa0757910 | MtrunA17_Chr5g0404141 | 75.884 | 311 | 69 | 1 | 1 | 305 | 1 | 311 | 3.47e-177 | 492 |
| Msa0757910 | MtrunA17_Chr8g0373201 | 62.783 | 309 | 106 | 1 | 1 | 300 | 1 | 309 | 1.14e-141 | 402 |
| Msa0757910 | MtrunA17_Chr5g0404161 | 76.852 | 216 | 44 | 1 | 1 | 210 | 11 | 226 | 5.68e-117 | 336 |
| Msa0757910 | MtrunA17_Chr3g0136411 | 37.319 | 276 | 163 | 5 | 26 | 297 | 32 | 301 | 1.31e-58 | 190 |
| Msa0757910 | MtrunA17_Chr5g0404171 | 90.323 | 93 | 9 | 0 | 211 | 303 | 1 | 93 | 5.15e-57 | 179 |
| Msa0757910 | MtrunA17_Chr3g0123881 | 35.593 | 295 | 172 | 7 | 9 | 296 | 15 | 298 | 4.11e-54 | 179 |
| Msa0757910 | MtrunA17_Chr5g0426241 | 33.333 | 297 | 178 | 7 | 9 | 296 | 13 | 298 | 5.90e-54 | 178 |
| Msa0757910 | MtrunA17_Chr2g0279171 | 32.270 | 282 | 181 | 6 | 19 | 296 | 26 | 301 | 1.20e-48 | 165 |
| Msa0757910 | MtrunA17_Chr8g0382001 | 36.290 | 124 | 73 | 2 | 15 | 138 | 18 | 135 | 5.50e-21 | 87.4 |
| Msa0757910 | MtrunA17_Chr8g0381981 | 29.932 | 147 | 84 | 3 | 169 | 296 | 10 | 156 | 3.18e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757910 | AT2G18360.1 | 55.016 | 309 | 129 | 1 | 1 | 299 | 1 | 309 | 8.97e-127 | 364 |
| Msa0757910 | AT4G36610.1 | 51.923 | 312 | 142 | 1 | 1 | 304 | 1 | 312 | 1.32e-119 | 346 |
| Msa0757910 | AT2G18360.2 | 51.471 | 272 | 122 | 1 | 1 | 262 | 1 | 272 | 1.51e-102 | 301 |
| Msa0757910 | AT5G21950.1 | 35.816 | 282 | 176 | 4 | 18 | 296 | 22 | 301 | 1.40e-56 | 185 |
| Msa0757910 | AT5G21950.6 | 35.816 | 282 | 176 | 4 | 18 | 296 | 74 | 353 | 1.13e-55 | 184 |
| Msa0757910 | AT1G78210.1 | 33.916 | 286 | 179 | 6 | 17 | 296 | 20 | 301 | 7.76e-55 | 181 |
| Msa0757910 | AT4G39955.1 | 32.993 | 294 | 179 | 6 | 13 | 298 | 16 | 299 | 1.81e-51 | 172 |
| Msa0757910 | AT5G21950.7 | 35.887 | 248 | 154 | 4 | 18 | 262 | 22 | 267 | 2.71e-48 | 162 |
| Msa0757910 | AT4G33180.1 | 31.399 | 293 | 180 | 8 | 16 | 296 | 21 | 304 | 9.42e-47 | 159 |
| Msa0757910 | AT5G09430.1 | 30.952 | 294 | 181 | 7 | 15 | 296 | 24 | 307 | 4.07e-44 | 153 |
| Msa0757910 | AT1G17430.1 | 31.597 | 288 | 171 | 9 | 25 | 298 | 56 | 331 | 3.10e-39 | 140 |
| Msa0757910 | AT1G72620.1 | 30.035 | 283 | 182 | 7 | 25 | 299 | 60 | 334 | 3.68e-39 | 140 |
| Msa0757910 | AT5G21950.3 | 34.694 | 196 | 125 | 2 | 18 | 212 | 22 | 215 | 1.49e-34 | 125 |
| Msa0757910 | AT5G21950.2 | 34.694 | 196 | 125 | 2 | 18 | 212 | 22 | 215 | 1.49e-34 | 125 |
| Msa0757910 | AT5G21950.5 | 34.694 | 196 | 125 | 2 | 18 | 212 | 74 | 267 | 7.54e-34 | 125 |
| Msa0757910 | AT5G21950.4 | 34.694 | 196 | 125 | 2 | 18 | 212 | 74 | 267 | 7.54e-34 | 125 |
| Msa0757910 | AT4G33180.2 | 31.707 | 205 | 121 | 6 | 16 | 210 | 21 | 216 | 6.64e-29 | 110 |
Find 92 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATTACCTGTGAAAATTT+TGG | 0.092151 | 5_2:-12934838 | None:intergenic |
| GAAATTACTAGGTTAGATTT+AGG | 0.172566 | 5_2:-12935518 | None:intergenic |
| ACAATAGTAACTTATACTTT+AGG | 0.255781 | 5_2:-12935424 | None:intergenic |
| CAATAGTAACTTATACTTTA+GGG | 0.286165 | 5_2:-12935423 | None:intergenic |
| GGCTGGTCATTTGGCTCATC+TGG | 0.296159 | 5_2:+12935247 | Msa0757910:CDS |
| ACTAGGTTAGATTTAGGGTT+AGG | 0.305871 | 5_2:-12935512 | None:intergenic |
| CTATCTTACTAAAGTTTATC+TGG | 0.317967 | 5_2:+12935479 | Msa0757910:three_prime_UTR |
| AAGGTACACGTATGAGATTC+TGG | 0.334714 | 5_2:+12932300 | Msa0757910:CDS |
| AAAATCATTGAGCAGGCAAT+TGG | 0.336654 | 5_2:-12933886 | None:intergenic |
| TGGCTTGATGGACTTGGACT+TGG | 0.338171 | 5_2:-12932348 | None:intergenic |
| AAATTACTAGGTTAGATTTA+GGG | 0.339858 | 5_2:-12935517 | None:intergenic |
| GTGAACATAATTTGGTCATT+TGG | 0.340509 | 5_2:+12932224 | Msa0757910:CDS |
| CAGAAGAAAGAAACTTCTTT+AGG | 0.364129 | 5_2:-12935295 | None:intergenic |
| GAATATATCAAAGGTGTGTT+TGG | 0.364343 | 5_2:+12935357 | Msa0757910:three_prime_UTR |
| AATAAAGAAGGCTGGTCATT+TGG | 0.368845 | 5_2:+12935238 | Msa0757910:CDS |
| GGCTTGATGGACTTGGACTT+GGG | 0.373325 | 5_2:-12932347 | None:intergenic |
| TGCTGGATTCTCTTCTTGTT+CGG | 0.380760 | 5_2:+12933788 | Msa0757910:CDS |
| TGGGGTGGAGAAATGTGTTT+TGG | 0.383408 | 5_2:+12933635 | Msa0757910:CDS |
| AGTTGTAACTGGCTCCGTTT+TGG | 0.386196 | 5_2:+12933728 | Msa0757910:CDS |
| GAGAACCACCACTGGCTTGA+TGG | 0.386783 | 5_2:-12932360 | None:intergenic |
| CTCCACGGCTTCTGCGGTGA+TGG | 0.387211 | 5_2:+12932383 | Msa0757910:CDS |
| GTGAATTAAATGCGTTAGAA+TGG | 0.389773 | 5_2:-12935545 | None:intergenic |
| CACCACTGGCTTGATGGACT+TGG | 0.394304 | 5_2:-12932354 | None:intergenic |
| GTTCAAGCTGTAGTTGTAAC+TGG | 0.395281 | 5_2:+12933717 | Msa0757910:CDS |
| TAATTTGGTCATTTGGTAGT+TGG | 0.398888 | 5_2:+12932231 | Msa0757910:CDS |
| TGGAATGGTGGCGTTTAAAA+TGG | 0.401285 | 5_2:+12933674 | Msa0757910:CDS |
| TGAACATGGTGAACATAATT+TGG | 0.408308 | 5_2:+12932216 | Msa0757910:CDS |
| TGGAGCCGCCGAAGAAAATT+AGG | 0.408458 | 5_2:-12932469 | None:intergenic |
| GGCTGAGCTTTATAGTGATC+TGG | 0.412917 | 5_2:+12933695 | Msa0757910:CDS |
| GTTATTGCCATCTTCTATTG+AGG | 0.428516 | 5_2:+12933815 | Msa0757910:CDS |
| GATAGATTTATATTAGTGTT+GGG | 0.429015 | 5_2:-12935461 | None:intergenic |
| CTAGGTTAGATTTAGGGTTA+GGG | 0.430424 | 5_2:-12935511 | None:intergenic |
| TACAAGAGTCCTTGATTAGT+AGG | 0.430827 | 5_2:+12933754 | Msa0757910:CDS |
| ATCTTCTATTGAGGGATTGA+AGG | 0.442559 | 5_2:+12933824 | Msa0757910:CDS |
| TTTATGTTCTGCGCAACCTC+TGG | 0.449101 | 5_2:-12935070 | None:intergenic |
| TTATTGCCATCTTCTATTGA+GGG | 0.454208 | 5_2:+12933816 | Msa0757910:CDS |
| GCAGAGGGGTTAAAGAAACT+TGG | 0.468717 | 5_2:+12933615 | Msa0757910:CDS |
| AACGACCATGTATTTACAAT+AGG | 0.473541 | 5_2:+12935270 | Msa0757910:CDS |
| AGATAGATTTATATTAGTGT+TGG | 0.473642 | 5_2:-12935462 | None:intergenic |
| GGAGCGAAGTGAGCTATTAG+AGG | 0.475327 | 5_2:+12934783 | Msa0757910:CDS |
| AGAATGGGAGGGAAATTACT+AGG | 0.484561 | 5_2:-12935529 | None:intergenic |
| TGCAGGTGATGTTCTCGAAT+AGG | 0.486436 | 5_2:+12934758 | Msa0757910:intron |
| TGGATTCAGTTATGGTGGAA+TGG | 0.487428 | 5_2:+12933659 | Msa0757910:CDS |
| TTTGTGTATTCAGAAACATT+TGG | 0.487702 | 5_2:+12933859 | Msa0757910:CDS |
| AAATCATTGAGCAGGCAATT+GGG | 0.488795 | 5_2:-12933885 | None:intergenic |
| TGAATTAAATGCGTTAGAAT+GGG | 0.490707 | 5_2:-12935544 | None:intergenic |
| CCGCCCCTGCGACCGATCAC+CGG | 0.494435 | 5_2:+12933572 | Msa0757910:intron |
| GTCCTTGATTAGTAGGGCAG+TGG | 0.498326 | 5_2:+12933761 | Msa0757910:CDS |
| CAAGCAGAGTGTTTGGCAGA+GGG | 0.503609 | 5_2:+12933600 | Msa0757910:CDS |
| AAACACTCTGCTTGAAAAGC+CGG | 0.504345 | 5_2:-12933591 | None:intergenic |
| AACATTTGAAGTAATAAAGA+AGG | 0.507370 | 5_2:+12935226 | Msa0757910:CDS |
| CAGAGGGGTTAAAGAAACTT+GGG | 0.513583 | 5_2:+12933616 | Msa0757910:CDS |
| CCTTTAGAAAATCATTGAGC+AGG | 0.514969 | 5_2:-12933893 | None:intergenic |
| GTCCATCACCGCAGAAGCCG+TGG | 0.517790 | 5_2:-12932385 | None:intergenic |
| TTCCACTGCCCTACTAATCA+AGG | 0.518514 | 5_2:-12933763 | None:intergenic |
| TCAAGCAGAGTGTTTGGCAG+AGG | 0.521718 | 5_2:+12933599 | Msa0757910:CDS |
| TTGGTTGGATTCAGTTATGG+TGG | 0.526865 | 5_2:+12933654 | Msa0757910:CDS |
| AGGTACACGTATGAGATTCT+GGG | 0.532553 | 5_2:+12932301 | Msa0757910:CDS |
| CTGCTTGAAAAGCCGGTGAT+CGG | 0.535364 | 5_2:-12933584 | None:intergenic |
| GGACTCTTGTATAGCCAAAA+CGG | 0.536386 | 5_2:-12933742 | None:intergenic |
| AGGCACCTATTGTAAATACA+TGG | 0.537294 | 5_2:-12935275 | None:intergenic |
| CGGTGATGGACTTGCAACAT+GGG | 0.541625 | 5_2:+12932397 | Msa0757910:CDS |
| TTCAATCCCTCAATAGAAGA+TGG | 0.543411 | 5_2:-12933822 | None:intergenic |
| CTTAAAACATTGCAAAGCGA+AGG | 0.544964 | 5_2:+12932152 | Msa0757910:five_prime_UTR |
| ACAAGAGTCCTTGATTAGTA+GGG | 0.545895 | 5_2:+12933755 | Msa0757910:CDS |
| GCGGTGATGGACTTGCAACA+TGG | 0.546302 | 5_2:+12932396 | Msa0757910:CDS |
| TCGGTCGGGCTTATCAGTTA+TGG | 0.549397 | 5_2:-12932489 | None:intergenic |
| CCGCCGAAGAAAATTAGGTC+AGG | 0.554011 | 5_2:-12932464 | None:intergenic |
| GTTCTCCTCCACGGCTTCTG+CGG | 0.555958 | 5_2:+12932377 | Msa0757910:CDS |
| GATGCATATATCAGGACGCT+AGG | 0.560135 | 5_2:+12935194 | Msa0757910:intron |
| TTTGAAGTAATAAAGAAGGC+TGG | 0.561474 | 5_2:+12935230 | Msa0757910:CDS |
| CACATCTATGAATATATCAA+AGG | 0.563351 | 5_2:+12935348 | Msa0757910:three_prime_UTR |
| AGTAGGGCAGTGGAAGATGC+TGG | 0.564974 | 5_2:+12933771 | Msa0757910:CDS |
| TTAATTAAACATGGTGAACA+TGG | 0.570656 | 5_2:+12932202 | Msa0757910:exon |
| GGATACGCCACTGATCGGTC+GGG | 0.581703 | 5_2:-12932503 | None:intergenic |
| ATTAAATGCGTTAGAATGGG+AGG | 0.598293 | 5_2:-12935541 | None:intergenic |
| CCGTGGAGGAGAACCACCAC+TGG | 0.606123 | 5_2:-12932368 | None:intergenic |
| TTAAATGCGTTAGAATGGGA+GGG | 0.608235 | 5_2:-12935540 | None:intergenic |
| TGTACCTTGCTCTATCTCCA+CGG | 0.623766 | 5_2:-12932285 | None:intergenic |
| CCAGTGGTGGTTCTCCTCCA+CGG | 0.625931 | 5_2:+12932368 | Msa0757910:CDS |
| GGTGATGTTCTCGAATAGGA+AGG | 0.637660 | 5_2:+12934762 | Msa0757910:intron |
| CAAGTCCATCAAGCCAGTGG+TGG | 0.639034 | 5_2:+12932355 | Msa0757910:CDS |
| AAGCAGAGTGTTTGGCAGAG+GGG | 0.643656 | 5_2:+12933601 | Msa0757910:CDS |
| AGTTGGACGATGAAGAATGT+AGG | 0.646491 | 5_2:+12932248 | Msa0757910:CDS |
| CATCACCGCAGAAGCCGTGG+AGG | 0.648231 | 5_2:-12932382 | None:intergenic |
| GTCCAAGTCCATCAAGCCAG+TGG | 0.652930 | 5_2:+12932352 | Msa0757910:CDS |
| AGAAACAAATTAATTAAACA+TGG | 0.654980 | 5_2:+12932193 | Msa0757910:exon |
| ATTCAGTTATGGTGGAATGG+TGG | 0.669440 | 5_2:+12933662 | Msa0757910:CDS |
| TACACCGTGGAGATAGAGCA+AGG | 0.676163 | 5_2:+12932281 | Msa0757910:CDS |
| GGGGTTAAAGAAACTTGGGG+TGG | 0.683398 | 5_2:+12933620 | Msa0757910:CDS |
| AGAGGGGTTAAAGAAACTTG+GGG | 0.711749 | 5_2:+12933617 | Msa0757910:CDS |
| AGGTGTGAAGCTTTACACCG+TGG | 0.765486 | 5_2:+12932268 | Msa0757910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAATAATAATAATAAT+AGG | - | chr5_2:12934234-12934253 | None:intergenic | 0.0% |
| !! | AACATGATTAAAAAATAAAT+TGG | + | chr5_2:12933097-12933116 | Msa0757910:intron | 10.0% |
| !!! | AAAAATTGATTGATAATTAA+AGG | - | chr5_2:12934147-12934166 | None:intergenic | 10.0% |
| !!! | TTCTTTTAAAAAAATGTTAT+TGG | + | chr5_2:12934283-12934302 | Msa0757910:intron | 10.0% |
| !!! | TTAACTTATCATTTTTTTTA+GGG | - | chr5_2:12934349-12934368 | None:intergenic | 10.0% |
| !!! | ATTAACTTATCATTTTTTTT+AGG | - | chr5_2:12934350-12934369 | None:intergenic | 10.0% |
| !! | ATTATTTCAAATCATTATTA+TGG | + | chr5_2:12935123-12935142 | Msa0757910:intron | 10.0% |
| !! | AGAAACAAATTAATTAAACA+TGG | + | chr5_2:12932193-12932212 | Msa0757910:exon | 15.0% |
| !!! | TTTTGAGCAAATAAAAAAAA+TGG | - | chr5_2:12932632-12932651 | None:intergenic | 15.0% |
| !!! | GAATTATACGTATATTATTT+TGG | + | chr5_2:12932691-12932710 | Msa0757910:intron | 15.0% |
| !!! | TTGATCTAAAATTAGAAAAT+TGG | + | chr5_2:12932716-12932735 | Msa0757910:intron | 15.0% |
| !!! | TAACTTATCATTTTTTTTAG+GGG | - | chr5_2:12934348-12934367 | None:intergenic | 15.0% |
| !!! | GATAATAAAAACTTAAGTTT+TGG | - | chr5_2:12934973-12934992 | None:intergenic | 15.0% |
| !! | ATACATATATATAATGGTGT+AGG | - | chr5_2:12932803-12932822 | None:intergenic | 20.0% |
| !! | TACTACTATATATTAGTGTA+GGG | - | chr5_2:12932841-12932860 | None:intergenic | 20.0% |
| !! | TTACTACTATATATTAGTGT+AGG | - | chr5_2:12932842-12932861 | None:intergenic | 20.0% |
| !!! | CTTTTGGATAAATTAAAAGA+TGG | - | chr5_2:12932933-12932952 | None:intergenic | 20.0% |
| !! | TGTATGTAATATCTTATTCA+TGG | - | chr5_2:12933262-12933281 | None:intergenic | 20.0% |
| !! | GACAAAAAAAAAAAAGATTG+TGG | - | chr5_2:12933978-12933997 | None:intergenic | 20.0% |
| !! | AATTGCAGAAAGATAATTAA+AGG | + | chr5_2:12934170-12934189 | Msa0757910:intron | 20.0% |
| !! | ATTGCAGAAAGATAATTAAA+GGG | + | chr5_2:12934171-12934190 | Msa0757910:intron | 20.0% |
| !! | AAAGATAATTAAAGGGTTAT+TGG | + | chr5_2:12934178-12934197 | Msa0757910:intron | 20.0% |
| !! | AACATTATATCATTAATTGC+AGG | + | chr5_2:12934741-12934760 | Msa0757910:intron | 20.0% |
| !!! | AAATTACCTGTGAAAATTTT+GGG | - | chr5_2:12934840-12934859 | None:intergenic | 20.0% |
| !!! | TAAATTACCTGTGAAAATTT+TGG | - | chr5_2:12934841-12934860 | None:intergenic | 20.0% |
| !! | TTGAAATAATTATAACTACG+TGG | - | chr5_2:12935113-12935132 | None:intergenic | 20.0% |
| !!! | AACATTTGAAGTAATAAAGA+AGG | + | chr5_2:12935226-12935245 | Msa0757910:CDS | 20.0% |
| !! | CAATAGTAACTTATACTTTA+GGG | - | chr5_2:12935426-12935445 | None:intergenic | 20.0% |
| !! | ACAATAGTAACTTATACTTT+AGG | - | chr5_2:12935427-12935446 | None:intergenic | 20.0% |
| !! | GATAGATTTATATTAGTGTT+GGG | - | chr5_2:12935464-12935483 | None:intergenic | 20.0% |
| !! | AGATAGATTTATATTAGTGT+TGG | - | chr5_2:12935465-12935484 | None:intergenic | 20.0% |
| !! | AAATTACTAGGTTAGATTTA+GGG | - | chr5_2:12935520-12935539 | None:intergenic | 20.0% |
| ! | TTAATTAAACATGGTGAACA+TGG | + | chr5_2:12932202-12932221 | Msa0757910:exon | 25.0% |
| !!! | ATTTGACAAAAGTACTCTTT+TGG | - | chr5_2:12932949-12932968 | None:intergenic | 25.0% |
| !! | GTAACTTATAAGCATTCTTT+TGG | - | chr5_2:12932978-12932997 | None:intergenic | 25.0% |
| !! | TGGGAAAATTGTTATGTTTT+TGG | - | chr5_2:12933023-12933042 | None:intergenic | 25.0% |
| !!! | ATCATTTCTGAAGTTACATA+CGG | + | chr5_2:12933174-12933193 | Msa0757910:intron | 25.0% |
| ! | AATATCTTATTCATGGACTT+GGG | - | chr5_2:12933255-12933274 | None:intergenic | 25.0% |
| ! | TAATATCTTATTCATGGACT+TGG | - | chr5_2:12933256-12933275 | None:intergenic | 25.0% |
| ! | TGCAAAGTGCAATAAATATA+AGG | + | chr5_2:12933487-12933506 | Msa0757910:intron | 25.0% |
| !!! | TGTGCAAATTTTGAAATTTC+AGG | + | chr5_2:12933515-12933534 | Msa0757910:intron | 25.0% |
| !!! | GTGCAAATTTTGAAATTTCA+GGG | + | chr5_2:12933516-12933535 | Msa0757910:intron | 25.0% |
| ! | TTTGTGTATTCAGAAACATT+TGG | + | chr5_2:12933859-12933878 | Msa0757910:CDS | 25.0% |
| ! | TTGTTAAACAAATGTATGCA+AGG | + | chr5_2:12934118-12934137 | Msa0757910:intron | 25.0% |
| ! | TTTGATGAGACAACAAAATA+TGG | + | chr5_2:12934313-12934332 | Msa0757910:intron | 25.0% |
| ! | AAAAAATGATGTGTACATGT+AGG | + | chr5_2:12934411-12934430 | Msa0757910:intron | 25.0% |
| ! | AAAAAAAAAACTCTCCAAAG+CGG | + | chr5_2:12934485-12934504 | Msa0757910:intron | 25.0% |
| !!! | AACTTAAGTTTTGGAAGAAT+GGG | - | chr5_2:12934964-12934983 | None:intergenic | 25.0% |
| !!! | AAACTTAAGTTTTGGAAGAA+TGG | - | chr5_2:12934965-12934984 | None:intergenic | 25.0% |
| !! | AGATAAAATTTTCAAACCAG+AGG | + | chr5_2:12935054-12935073 | Msa0757910:CDS | 25.0% |
| ! | GTGATCAAGATAAACTTTAA+AGG | - | chr5_2:12935159-12935178 | None:intergenic | 25.0% |
| ! | TAATTGTTGATGCATATATC+AGG | + | chr5_2:12935186-12935205 | Msa0757910:intron | 25.0% |
| ! | CACATCTATGAATATATCAA+AGG | + | chr5_2:12935348-12935367 | Msa0757910:three_prime_UTR | 25.0% |
| ! | CTATCTTACTAAAGTTTATC+TGG | + | chr5_2:12935479-12935498 | Msa0757910:three_prime_UTR | 25.0% |
| ! | GAAATTACTAGGTTAGATTT+AGG | - | chr5_2:12935521-12935540 | None:intergenic | 25.0% |
| TGAACATGGTGAACATAATT+TGG | + | chr5_2:12932216-12932235 | Msa0757910:CDS | 30.0% | |
| GTGAACATAATTTGGTCATT+TGG | + | chr5_2:12932224-12932243 | Msa0757910:CDS | 30.0% | |
| ! | TAATTTGGTCATTTGGTAGT+TGG | + | chr5_2:12932231-12932250 | Msa0757910:CDS | 30.0% |
| !!! | GGCTTTGAAATAGTTTTAGA+TGG | - | chr5_2:12932329-12932348 | None:intergenic | 30.0% |
| CAAGCTTCACAATAAATCTA+CGG | - | chr5_2:12933048-12933067 | None:intergenic | 30.0% | |
| !! | TCATTTCTGAAGTTACATAC+GGG | + | chr5_2:12933175-12933194 | Msa0757910:intron | 30.0% |
| ACAAAACCCTAGTTAATTGT+TGG | + | chr5_2:12933279-12933298 | Msa0757910:intron | 30.0% | |
| ! | GATTAGCCAACAATTAACTA+GGG | - | chr5_2:12933288-12933307 | None:intergenic | 30.0% |
| ! | TGATTAGCCAACAATTAACT+AGG | - | chr5_2:12933289-12933308 | None:intergenic | 30.0% |
| AAAACTGAAGTAAGAAGTGA+AGG | - | chr5_2:12933411-12933430 | None:intergenic | 30.0% | |
| TTATTGCCATCTTCTATTGA+GGG | + | chr5_2:12933816-12933835 | Msa0757910:CDS | 30.0% | |
| !!! | TCAATTTTGAGGTCTTAAAC+CGG | - | chr5_2:12934438-12934457 | None:intergenic | 30.0% |
| ! | GTTTAAGACCTCAAAATTGA+GGG | + | chr5_2:12934438-12934457 | Msa0757910:intron | 30.0% |
| !! | TGTTTTTACAATCATGGCTA+AGG | - | chr5_2:12934559-12934578 | None:intergenic | 30.0% |
| CCATAAATACCTATAGAGAT+GGG | - | chr5_2:12934582-12934601 | None:intergenic | 30.0% | |
| !!! | CTCTAACACTCTTTGTTTTA+CGG | + | chr5_2:12934876-12934895 | Msa0757910:intron | 30.0% |
| !!! | TCTAACACTCTTTGTTTTAC+GGG | + | chr5_2:12934877-12934896 | Msa0757910:intron | 30.0% |
| ! | TTTGAAGTAATAAAGAAGGC+TGG | + | chr5_2:12935230-12935249 | Msa0757910:CDS | 30.0% |
| AACGACCATGTATTTACAAT+AGG | + | chr5_2:12935270-12935289 | Msa0757910:CDS | 30.0% | |
| CAGAAGAAAGAAACTTCTTT+AGG | - | chr5_2:12935298-12935317 | None:intergenic | 30.0% | |
| ! | GAATATATCAAAGGTGTGTT+TGG | + | chr5_2:12935357-12935376 | Msa0757910:three_prime_UTR | 30.0% |
| CTTAAAACATTGCAAAGCGA+AGG | + | chr5_2:12932152-12932171 | Msa0757910:five_prime_UTR | 35.0% | |
| ! | GTACCTGACCTAATTTTCTT+CGG | + | chr5_2:12932461-12932480 | Msa0757910:CDS | 35.0% |
| TCACAATAAATCTACGGTGT+GGG | - | chr5_2:12933042-12933061 | None:intergenic | 35.0% | |
| TTCACAATAAATCTACGGTG+TGG | - | chr5_2:12933043-12933062 | None:intergenic | 35.0% | |
| ATTTATTGTGAAGCTTGACC+AGG | + | chr5_2:12933051-12933070 | Msa0757910:intron | 35.0% | |
| !! | CATTTCTGAAGTTACATACG+GGG | + | chr5_2:12933176-12933195 | Msa0757910:intron | 35.0% |
| !! | CTTGGGTCAAATGTTACTTT+GGG | - | chr5_2:12933238-12933257 | None:intergenic | 35.0% |
| ! | ACTTGGGTCAAATGTTACTT+TGG | - | chr5_2:12933239-12933258 | None:intergenic | 35.0% |
| ! | GGTGCAAAGAGAAATTTTCA+GGG | + | chr5_2:12933462-12933481 | Msa0757910:intron | 35.0% |
| !!! | GTTTTGGTTGGATTCAGTTA+TGG | + | chr5_2:12933651-12933670 | Msa0757910:CDS | 35.0% |
| TACAAGAGTCCTTGATTAGT+AGG | + | chr5_2:12933754-12933773 | Msa0757910:CDS | 35.0% | |
| ACAAGAGTCCTTGATTAGTA+GGG | + | chr5_2:12933755-12933774 | Msa0757910:CDS | 35.0% | |
| GTTATTGCCATCTTCTATTG+AGG | + | chr5_2:12933815-12933834 | Msa0757910:CDS | 35.0% | |
| TTCAATCCCTCAATAGAAGA+TGG | - | chr5_2:12933825-12933844 | None:intergenic | 35.0% | |
| ATCTTCTATTGAGGGATTGA+AGG | + | chr5_2:12933824-12933843 | Msa0757910:CDS | 35.0% | |
| AAATCATTGAGCAGGCAATT+GGG | - | chr5_2:12933888-12933907 | None:intergenic | 35.0% | |
| AAAATCATTGAGCAGGCAAT+TGG | - | chr5_2:12933889-12933908 | None:intergenic | 35.0% | |
| ! | CCTTTAGAAAATCATTGAGC+AGG | - | chr5_2:12933896-12933915 | None:intergenic | 35.0% |
| ! | CCTGCTCAATGATTTTCTAA+AGG | + | chr5_2:12933893-12933912 | Msa0757910:CDS | 35.0% |
| ! | GGTTTAAGACCTCAAAATTG+AGG | + | chr5_2:12934437-12934456 | Msa0757910:intron | 35.0% |
| !! | AGCATTTTAGGTGGTGAAAA+AGG | + | chr5_2:12934522-12934541 | Msa0757910:intron | 35.0% |
| !! | GCATTTTAGGTGGTGAAAAA+GGG | + | chr5_2:12934523-12934542 | Msa0757910:intron | 35.0% |
| !! | CATTTTAGGTGGTGAAAAAG+GGG | + | chr5_2:12934524-12934543 | Msa0757910:intron | 35.0% |
| !! | GATGGGTGTTTTTACAATCA+TGG | - | chr5_2:12934565-12934584 | None:intergenic | 35.0% |
| GTAAAAACACCCATCTCTAT+AGG | + | chr5_2:12934570-12934589 | Msa0757910:intron | 35.0% | |
| CCCATCTCTATAGGTATTTA+TGG | + | chr5_2:12934579-12934598 | Msa0757910:intron | 35.0% | |
| GCCATAAATACCTATAGAGA+TGG | - | chr5_2:12934583-12934602 | None:intergenic | 35.0% | |
| ATAGGTATTTATGGCCACAA+TGG | + | chr5_2:12934588-12934607 | Msa0757910:intron | 35.0% | |
| TAGGTATTTATGGCCACAAT+GGG | + | chr5_2:12934589-12934608 | Msa0757910:intron | 35.0% | |
| TTTCCTATTAGAACCCATTG+TGG | - | chr5_2:12934605-12934624 | None:intergenic | 35.0% | |
| CTAATAGGAAAGAGCAAACT+AGG | + | chr5_2:12934614-12934633 | Msa0757910:intron | 35.0% | |
| ! | CAATGTCCCAAAATTTTCAC+AGG | + | chr5_2:12934831-12934850 | Msa0757910:CDS | 35.0% |
| ! | TGCAGCGAATACATCTTTTA+TGG | + | chr5_2:12935023-12935042 | Msa0757910:intron | 35.0% |
| ! | GCAGCGAATACATCTTTTAT+GGG | + | chr5_2:12935024-12935043 | Msa0757910:intron | 35.0% |
| ! | CAGCGAATACATCTTTTATG+GGG | + | chr5_2:12935025-12935044 | Msa0757910:intron | 35.0% |
| ! | AATAAAGAAGGCTGGTCATT+TGG | + | chr5_2:12935238-12935257 | Msa0757910:CDS | 35.0% |
| AGGCACCTATTGTAAATACA+TGG | - | chr5_2:12935278-12935297 | None:intergenic | 35.0% | |
| ! | CTAGGTTAGATTTAGGGTTA+GGG | - | chr5_2:12935514-12935533 | None:intergenic | 35.0% |
| ! | ACTAGGTTAGATTTAGGGTT+AGG | - | chr5_2:12935515-12935534 | None:intergenic | 35.0% |
| AGTTGGACGATGAAGAATGT+AGG | + | chr5_2:12932248-12932267 | Msa0757910:CDS | 40.0% | |
| AAGGTACACGTATGAGATTC+TGG | + | chr5_2:12932300-12932319 | Msa0757910:CDS | 40.0% | |
| AGGTACACGTATGAGATTCT+GGG | + | chr5_2:12932301-12932320 | Msa0757910:CDS | 40.0% | |
| !!! | GAATTTTTTTTGCACCCCCT+GGG | - | chr5_2:12932539-12932558 | None:intergenic | 40.0% |
| !!! | TGAATTTTTTTTGCACCCCC+TGG | - | chr5_2:12932540-12932559 | None:intergenic | 40.0% |
| AGCATGACCGTATCAATGTA+CGG | + | chr5_2:12933123-12933142 | Msa0757910:intron | 40.0% | |
| AACCACACCGTACATTGATA+CGG | - | chr5_2:12933133-12933152 | None:intergenic | 40.0% | |
| CATCTCTTAAAGTCCACTCT+TGG | + | chr5_2:12933212-12933231 | Msa0757910:intron | 40.0% | |
| TGAACCAGAGAAGAAGATGA+GGG | - | chr5_2:12933333-12933352 | None:intergenic | 40.0% | |
| ATGAACCAGAGAAGAAGATG+AGG | - | chr5_2:12933334-12933353 | None:intergenic | 40.0% | |
| TGTGACAGAATAGTGAACCA+CGG | + | chr5_2:12933440-12933459 | Msa0757910:intron | 40.0% | |
| AAAATTTCTCTTTGCACCCG+TGG | - | chr5_2:12933460-12933479 | None:intergenic | 40.0% | |
| ! | GGGTGCAAAGAGAAATTTTC+AGG | + | chr5_2:12933461-12933480 | Msa0757910:intron | 40.0% |
| ! | TTTGAAATTTCAGGGTGTGC+AGG | + | chr5_2:12933524-12933543 | Msa0757910:intron | 40.0% |
| AAACACTCTGCTTGAAAAGC+CGG | - | chr5_2:12933594-12933613 | None:intergenic | 40.0% | |
| CAGAGGGGTTAAAGAAACTT+GGG | + | chr5_2:12933616-12933635 | Msa0757910:CDS | 40.0% | |
| AGAGGGGTTAAAGAAACTTG+GGG | + | chr5_2:12933617-12933636 | Msa0757910:CDS | 40.0% | |
| !!! | GTGGAGAAATGTGTTTTGGT+TGG | + | chr5_2:12933639-12933658 | Msa0757910:CDS | 40.0% |
| TTGGTTGGATTCAGTTATGG+TGG | + | chr5_2:12933654-12933673 | Msa0757910:CDS | 40.0% | |
| ! | TGGATTCAGTTATGGTGGAA+TGG | + | chr5_2:12933659-12933678 | Msa0757910:CDS | 40.0% |
| ! | ATTCAGTTATGGTGGAATGG+TGG | + | chr5_2:12933662-12933681 | Msa0757910:CDS | 40.0% |
| ! | TGGAATGGTGGCGTTTAAAA+TGG | + | chr5_2:12933674-12933693 | Msa0757910:CDS | 40.0% |
| GTTCAAGCTGTAGTTGTAAC+TGG | + | chr5_2:12933717-12933736 | Msa0757910:CDS | 40.0% | |
| GGACTCTTGTATAGCCAAAA+CGG | - | chr5_2:12933745-12933764 | None:intergenic | 40.0% | |
| TGCTGGATTCTCTTCTTGTT+CGG | + | chr5_2:12933788-12933807 | Msa0757910:CDS | 40.0% | |
| ATGATGTGTACATGTAGGAC+CGG | + | chr5_2:12934416-12934435 | Msa0757910:intron | 40.0% | |
| ! | CTTACAGACCCTCAATTTTG+AGG | - | chr5_2:12934449-12934468 | None:intergenic | 40.0% |
| AATTGAGGGTCTGTAAGAGA+TGG | + | chr5_2:12934452-12934471 | Msa0757910:intron | 40.0% | |
| ATTGAGGGTCTGTAAGAGAT+GGG | + | chr5_2:12934453-12934472 | Msa0757910:intron | 40.0% | |
| TCTGTAAGAGATGGGTACAT+TGG | + | chr5_2:12934461-12934480 | Msa0757910:intron | 40.0% | |
| !!! | GATGAGATGGAGAGCATTTT+AGG | + | chr5_2:12934510-12934529 | Msa0757910:intron | 40.0% |
| TGCGCAGAACATAAAAGAGT+AGG | + | chr5_2:12935078-12935097 | Msa0757910:intron | 40.0% | |
| AGAATGGGAGGGAAATTACT+AGG | - | chr5_2:12935532-12935551 | None:intergenic | 40.0% | |
| TGTACCTTGCTCTATCTCCA+CGG | - | chr5_2:12932288-12932307 | None:intergenic | 45.0% | |
| ! | CCTGACCTAATTTTCTTCGG+CGG | + | chr5_2:12932464-12932483 | Msa0757910:CDS | 45.0% |
| TCAATGTACGGTGTGGTTGT+TGG | + | chr5_2:12933135-12933154 | Msa0757910:intron | 45.0% | |
| TACGGTGTGGTTGTTGGATT+TGG | + | chr5_2:12933141-12933160 | Msa0757910:intron | 45.0% | |
| !! | ATGTTACTTTGGGCCAAGAG+TGG | - | chr5_2:12933228-12933247 | None:intergenic | 45.0% |
| ATACTGGAAGGAGAAGTGGA+AGG | - | chr5_2:12933372-12933391 | None:intergenic | 45.0% | |
| ACTTCTCCTTCCAGTATGCT+GGG | + | chr5_2:12933375-12933394 | Msa0757910:intron | 45.0% | |
| TGAATCGTAACCCAGCATAC+TGG | - | chr5_2:12933388-12933407 | None:intergenic | 45.0% | |
| GTGACAGAATAGTGAACCAC+GGG | + | chr5_2:12933441-12933460 | Msa0757910:intron | 45.0% | |
| GCGGATCTATATAGAGGTGA+GGG | - | chr5_2:12933556-12933575 | None:intergenic | 45.0% | |
| !! | GGCTTTTCAAGCAGAGTGTT+TGG | + | chr5_2:12933593-12933612 | Msa0757910:CDS | 45.0% |
| GCAGAGGGGTTAAAGAAACT+TGG | + | chr5_2:12933615-12933634 | Msa0757910:CDS | 45.0% | |
| ! | TGGGGTGGAGAAATGTGTTT+TGG | + | chr5_2:12933635-12933654 | Msa0757910:CDS | 45.0% |
| ! | GGCTGAGCTTTATAGTGATC+TGG | + | chr5_2:12933695-12933714 | Msa0757910:CDS | 45.0% |
| !! | AGTTGTAACTGGCTCCGTTT+TGG | + | chr5_2:12933728-12933747 | Msa0757910:CDS | 45.0% |
| TTCCACTGCCCTACTAATCA+AGG | - | chr5_2:12933766-12933785 | None:intergenic | 45.0% | |
| !!! | GAGATGGAGAGCATTTTAGG+TGG | + | chr5_2:12934513-12934532 | Msa0757910:intron | 45.0% |
| ! | TGGCCACAATGGGTTCTAAT+AGG | + | chr5_2:12934599-12934618 | Msa0757910:intron | 45.0% |
| TGCAGGTGATGTTCTCGAAT+AGG | + | chr5_2:12934758-12934777 | Msa0757910:intron | 45.0% | |
| GGTGATGTTCTCGAATAGGA+AGG | + | chr5_2:12934762-12934781 | Msa0757910:intron | 45.0% | |
| TTTATGTTCTGCGCAACCTC+TGG | - | chr5_2:12935073-12935092 | None:intergenic | 45.0% | |
| GATGCATATATCAGGACGCT+AGG | + | chr5_2:12935194-12935213 | Msa0757910:intron | 45.0% | |
| !! | AATAAATAAAAAATAAACAA+AGG | + | chr5_2:12932758-12932777 | Msa0757910:intron | 5.0% |
| !! | ATATATATACATATATATAA+TGG | - | chr5_2:12932809-12932828 | None:intergenic | 5.0% |
| !!! | ATATTTTATAAGTTATTATT+TGG | + | chr5_2:12935387-12935406 | Msa0757910:three_prime_UTR | 5.0% |
| !!! | TATTTTATAAGTTATTATTT+GGG | + | chr5_2:12935388-12935407 | Msa0757910:three_prime_UTR | 5.0% |
| AGGTGTGAAGCTTTACACCG+TGG | + | chr5_2:12932268-12932287 | Msa0757910:CDS | 50.0% | |
| TACACCGTGGAGATAGAGCA+AGG | + | chr5_2:12932281-12932300 | Msa0757910:CDS | 50.0% | |
| !! | GGCTTGATGGACTTGGACTT+GGG | - | chr5_2:12932350-12932369 | None:intergenic | 50.0% |
| !! | TGGCTTGATGGACTTGGACT+TGG | - | chr5_2:12932351-12932370 | None:intergenic | 50.0% |
| !! | CGGTGATGGACTTGCAACAT+GGG | + | chr5_2:12932397-12932416 | Msa0757910:CDS | 50.0% |
| CCGCCGAAGAAAATTAGGTC+AGG | - | chr5_2:12932467-12932486 | None:intergenic | 50.0% | |
| TGGAGCCGCCGAAGAAAATT+AGG | - | chr5_2:12932472-12932491 | None:intergenic | 50.0% | |
| TCGGTCGGGCTTATCAGTTA+TGG | - | chr5_2:12932492-12932511 | None:intergenic | 50.0% | |
| GACCGTATCAATGTACGGTG+TGG | + | chr5_2:12933128-12933147 | Msa0757910:intron | 50.0% | |
| AGAGAAGAAGATGAGGGAGG+CGG | - | chr5_2:12933327-12933346 | None:intergenic | 50.0% | |
| ACCAGAGAAGAAGATGAGGG+AGG | - | chr5_2:12933330-12933349 | None:intergenic | 50.0% | |
| CAGCATACTGGAAGGAGAAG+TGG | - | chr5_2:12933376-12933395 | None:intergenic | 50.0% | |
| CACTTCTCCTTCCAGTATGC+TGG | + | chr5_2:12933374-12933393 | Msa0757910:intron | 50.0% | |
| TCGTAACCCAGCATACTGGA+AGG | - | chr5_2:12933384-12933403 | None:intergenic | 50.0% | |
| GGCGGATCTATATAGAGGTG+AGG | - | chr5_2:12933557-12933576 | None:intergenic | 50.0% | |
| CTGCTTGAAAAGCCGGTGAT+CGG | - | chr5_2:12933587-12933606 | None:intergenic | 50.0% | |
| ! | TCAAGCAGAGTGTTTGGCAG+AGG | + | chr5_2:12933599-12933618 | Msa0757910:CDS | 50.0% |
| ! | CAAGCAGAGTGTTTGGCAGA+GGG | + | chr5_2:12933600-12933619 | Msa0757910:CDS | 50.0% |
| ! | AAGCAGAGTGTTTGGCAGAG+GGG | + | chr5_2:12933601-12933620 | Msa0757910:CDS | 50.0% |
| GGGGTTAAAGAAACTTGGGG+TGG | + | chr5_2:12933620-12933639 | Msa0757910:CDS | 50.0% | |
| GTCCTTGATTAGTAGGGCAG+TGG | + | chr5_2:12933761-12933780 | Msa0757910:CDS | 50.0% | |
| CTCCAAAGCGGATGATGAGA+TGG | + | chr5_2:12934497-12934516 | Msa0757910:intron | 50.0% | |
| CTCCATCTCATCATCCGCTT+TGG | - | chr5_2:12934502-12934521 | None:intergenic | 50.0% | |
| TAGGTGGTGAAAAAGGGGAG+TGG | + | chr5_2:12934529-12934548 | Msa0757910:intron | 50.0% | |
| GGAGCGAAGTGAGCTATTAG+AGG | + | chr5_2:12934783-12934802 | Msa0757910:CDS | 50.0% | |
| GTCCAAGTCCATCAAGCCAG+TGG | + | chr5_2:12932352-12932371 | Msa0757910:CDS | 55.0% | |
| !! | CACCACTGGCTTGATGGACT+TGG | - | chr5_2:12932357-12932376 | None:intergenic | 55.0% |
| CAAGTCCATCAAGCCAGTGG+TGG | + | chr5_2:12932355-12932374 | Msa0757910:CDS | 55.0% | |
| !! | GAGAACCACCACTGGCTTGA+TGG | - | chr5_2:12932363-12932382 | None:intergenic | 55.0% |
| !! | GCGGTGATGGACTTGCAACA+TGG | + | chr5_2:12932396-12932415 | Msa0757910:CDS | 55.0% |
| TGATAAGCCCGACCGATCAG+TGG | + | chr5_2:12932496-12932515 | Msa0757910:intron | 55.0% | |
| TGGATACGCCACTGATCGGT+CGG | - | chr5_2:12932507-12932526 | None:intergenic | 55.0% | |
| GTCCTGGATACGCCACTGAT+CGG | - | chr5_2:12932511-12932530 | None:intergenic | 55.0% | |
| CCTTGAAATGCGTGTCAGCC+TGG | - | chr5_2:12933072-12933091 | None:intergenic | 55.0% | |
| CCAGGCTGACACGCATTTCA+AGG | + | chr5_2:12933069-12933088 | Msa0757910:intron | 55.0% | |
| GCCTCCCTCATCTTCTTCTC+TGG | + | chr5_2:12933326-12933345 | Msa0757910:intron | 55.0% | |
| GCAGGGGCGGATCTATATAG+AGG | - | chr5_2:12933562-12933581 | None:intergenic | 55.0% | |
| AGTAGGGCAGTGGAAGATGC+TGG | + | chr5_2:12933771-12933790 | Msa0757910:CDS | 55.0% | |
| ! | GGCTGGTCATTTGGCTCATC+TGG | + | chr5_2:12935247-12935266 | Msa0757910:CDS | 55.0% |
| CCAGTGGTGGTTCTCCTCCA+CGG | + | chr5_2:12932368-12932387 | Msa0757910:CDS | 60.0% | |
| GTTCTCCTCCACGGCTTCTG+CGG | + | chr5_2:12932377-12932396 | Msa0757910:CDS | 60.0% | |
| GGATACGCCACTGATCGGTC+GGG | - | chr5_2:12932506-12932525 | None:intergenic | 60.0% | |
| GACCGATCAGTGGCGTATCC+AGG | + | chr5_2:12932506-12932525 | Msa0757910:intron | 60.0% | |
| ! | TTTTTGCACCCCCTGGGCCA+GGG | - | chr5_2:12932533-12932552 | None:intergenic | 60.0% |
| !!! | TTTTTTGCACCCCCTGGGCC+AGG | - | chr5_2:12932534-12932553 | None:intergenic | 60.0% |
| AAAGCCGGTGATCGGTCGCA+GGG | - | chr5_2:12933579-12933598 | None:intergenic | 60.0% | |
| AAAAGCCGGTGATCGGTCGC+AGG | - | chr5_2:12933580-12933599 | None:intergenic | 60.0% | |
| CCGTGGAGGAGAACCACCAC+TGG | - | chr5_2:12932371-12932390 | None:intergenic | 65.0% | |
| CATCACCGCAGAAGCCGTGG+AGG | - | chr5_2:12932385-12932404 | None:intergenic | 65.0% | |
| CTCCACGGCTTCTGCGGTGA+TGG | + | chr5_2:12932383-12932402 | Msa0757910:CDS | 65.0% | |
| GTCCATCACCGCAGAAGCCG+TGG | - | chr5_2:12932388-12932407 | None:intergenic | 65.0% | |
| CAGTGGCGTATCCAGGACCC+TGG | + | chr5_2:12932513-12932532 | Msa0757910:intron | 65.0% | |
| GTATCCAGGACCCTGGCCCA+GGG | + | chr5_2:12932520-12932539 | Msa0757910:intron | 65.0% | |
| TATCCAGGACCCTGGCCCAG+GGG | + | chr5_2:12932521-12932540 | Msa0757910:intron | 65.0% | |
| AAGCCGGTGATCGGTCGCAG+GGG | - | chr5_2:12933578-12933597 | None:intergenic | 65.0% | |
| CGTATCCAGGACCCTGGCCC+AGG | + | chr5_2:12932519-12932538 | Msa0757910:intron | 70.0% | |
| ATCCAGGACCCTGGCCCAGG+GGG | + | chr5_2:12932522-12932541 | Msa0757910:intron | 70.0% | |
| CCGGTGATCGGTCGCAGGGG+CGG | - | chr5_2:12933575-12933594 | None:intergenic | 75.0% | |
| CCGCCCCTGCGACCGATCAC+CGG | + | chr5_2:12933572-12933591 | Msa0757910:intron | 75.0% | |
| ! | CACCCCCTGGGCCAGGGTCC+TGG | - | chr5_2:12932527-12932546 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 12932141 | 12935556 | 12932141 | ID=Msa0757910;Name=Msa0757910 |
| chr5_2 | mRNA | 12932141 | 12935556 | 12932141 | ID=Msa0757910-mRNA-1;Parent=Msa0757910;Name=Msa0757910-mRNA-1;_AED=0.25;_eAED=0.25;_QI=71|1|1|1|0.75|0.6|5|216|305 |
| chr5_2 | exon | 12932141 | 12932510 | 12932141 | ID=Msa0757910-mRNA-1:exon:5785;Parent=Msa0757910-mRNA-1 |
| chr5_2 | exon | 12933587 | 12933914 | 12933587 | ID=Msa0757910-mRNA-1:exon:5786;Parent=Msa0757910-mRNA-1 |
| chr5_2 | exon | 12934763 | 12934852 | 12934763 | ID=Msa0757910-mRNA-1:exon:5787;Parent=Msa0757910-mRNA-1 |
| chr5_2 | exon | 12935028 | 12935095 | 12935028 | ID=Msa0757910-mRNA-1:exon:5788;Parent=Msa0757910-mRNA-1 |
| chr5_2 | exon | 12935208 | 12935556 | 12935208 | ID=Msa0757910-mRNA-1:exon:5789;Parent=Msa0757910-mRNA-1 |
| chr5_2 | five_prime_UTR | 12932141 | 12932211 | 12932141 | ID=Msa0757910-mRNA-1:five_prime_utr;Parent=Msa0757910-mRNA-1 |
| chr5_2 | CDS | 12932212 | 12932510 | 12932212 | ID=Msa0757910-mRNA-1:cds;Parent=Msa0757910-mRNA-1 |
| chr5_2 | CDS | 12933587 | 12933914 | 12933587 | ID=Msa0757910-mRNA-1:cds;Parent=Msa0757910-mRNA-1 |
| chr5_2 | CDS | 12934763 | 12934852 | 12934763 | ID=Msa0757910-mRNA-1:cds;Parent=Msa0757910-mRNA-1 |
| chr5_2 | CDS | 12935028 | 12935095 | 12935028 | ID=Msa0757910-mRNA-1:cds;Parent=Msa0757910-mRNA-1 |
| chr5_2 | CDS | 12935208 | 12935340 | 12935208 | ID=Msa0757910-mRNA-1:cds;Parent=Msa0757910-mRNA-1 |
| chr5_2 | three_prime_UTR | 12935341 | 12935556 | 12935341 | ID=Msa0757910-mRNA-1:three_prime_utr;Parent=Msa0757910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
