Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799210 | AES94970.1 | 92.131 | 305 | 24 | 0 | 1 | 305 | 1 | 305 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799210 | G7KDL9 | 92.131 | 305 | 24 | 0 | 1 | 305 | 1 | 305 | 0.0 | 584 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0799210 | 0.827061 | 1.925857e-54 | -8.615850e-47 |
| Msa0004360 | Msa0799210 | 0.842588 | 2.359945e-58 | -8.615850e-47 |
| Msa0005050 | Msa0799210 | 0.827813 | 1.271364e-54 | -8.615850e-47 |
| Msa0007450 | Msa0799210 | 0.806790 | 6.933840e-50 | -8.615850e-47 |
| Msa0017120 | Msa0799210 | 0.822737 | 2.018765e-53 | -8.615850e-47 |
| Msa0018220 | Msa0799210 | 0.850119 | 2.086197e-60 | -8.615850e-47 |
| Msa0024680 | Msa0799210 | 0.809583 | 1.761563e-50 | -8.615850e-47 |
| Msa0032840 | Msa0799210 | -0.804870 | 1.755229e-49 | -8.615850e-47 |
| Msa0041540 | Msa0799210 | 0.815773 | 7.786845e-52 | -8.615850e-47 |
| Msa0048020 | Msa0799210 | 0.817950 | 2.527118e-52 | -8.615850e-47 |
| Msa0052460 | Msa0799210 | 0.827954 | 1.175866e-54 | -8.615850e-47 |
| Msa0053110 | Msa0799210 | 0.838009 | 3.709508e-57 | -8.615850e-47 |
| Msa0065390 | Msa0799210 | 0.802528 | 5.374748e-49 | -8.615850e-47 |
| Msa0072810 | Msa0799210 | 0.826883 | 2.124539e-54 | -8.615850e-47 |
| Msa0083920 | Msa0799210 | 0.806227 | 9.113239e-50 | -8.615850e-47 |
| Msa0089210 | Msa0799210 | 0.800663 | 1.296885e-48 | -8.615850e-47 |
| Msa0094420 | Msa0799210 | 0.822013 | 2.971967e-53 | -8.615850e-47 |
| Msa0097050 | Msa0799210 | 0.847505 | 1.108209e-59 | -8.615850e-47 |
| Msa0098440 | Msa0799210 | 0.828299 | 9.709321e-55 | -8.615850e-47 |
| Msa0103000 | Msa0799210 | 0.813472 | 2.515439e-51 | -8.615850e-47 |
| Msa0103780 | Msa0799210 | 0.807600 | 4.669719e-50 | -8.615850e-47 |
| Msa0109950 | Msa0799210 | 0.825829 | 3.786516e-54 | -8.615850e-47 |
| Msa0110710 | Msa0799210 | 0.805373 | 1.377360e-49 | -8.615850e-47 |
| Msa0610860 | Msa0799210 | 0.814963 | 1.178805e-51 | -8.615850e-47 |
| Msa0614230 | Msa0799210 | 0.811839 | 5.727311e-51 | -8.615850e-47 |
| Msa0619330 | Msa0799210 | 0.814907 | 1.212997e-51 | -8.615850e-47 |
| Msa0619930 | Msa0799210 | 0.802468 | 5.530610e-49 | -8.615850e-47 |
| Msa0619980 | Msa0799210 | 0.825608 | 4.273236e-54 | -8.615850e-47 |
| Msa0620270 | Msa0799210 | 0.830208 | 3.341538e-55 | -8.615850e-47 |
| Msa0633750 | Msa0799210 | 0.817023 | 4.089249e-52 | -8.615850e-47 |
| Msa0634270 | Msa0799210 | 0.847920 | 8.520840e-60 | -8.615850e-47 |
| Msa0640880 | Msa0799210 | 0.847735 | 9.582972e-60 | -8.615850e-47 |
| Msa0641620 | Msa0799210 | 0.818035 | 2.417960e-52 | -8.615850e-47 |
| Msa0642650 | Msa0799210 | 0.835082 | 2.064386e-56 | -8.615850e-47 |
| Msa0645050 | Msa0799210 | 0.812602 | 3.904122e-51 | -8.615850e-47 |
| Msa0651350 | Msa0799210 | 0.802652 | 5.068758e-49 | -8.615850e-47 |
| Msa0678890 | Msa0799210 | 0.830421 | 2.964136e-55 | -8.615850e-47 |
| Msa0680150 | Msa0799210 | 0.810478 | 1.130066e-50 | -8.615850e-47 |
| Msa0681890 | Msa0799210 | 0.829151 | 6.042724e-55 | -8.615850e-47 |
| Msa0682400 | Msa0799210 | 0.812376 | 4.374319e-51 | -8.615850e-47 |
| Msa0688540 | Msa0799210 | 0.925156 | 2.685956e-90 | -8.615850e-47 |
| Msa0691160 | Msa0799210 | 0.808245 | 3.404832e-50 | -8.615850e-47 |
| Msa0693570 | Msa0799210 | 0.808852 | 2.526763e-50 | -8.615850e-47 |
| Msa0703720 | Msa0799210 | 0.811719 | 6.082260e-51 | -8.615850e-47 |
| Msa0707220 | Msa0799210 | 0.802297 | 5.997556e-49 | -8.615850e-47 |
| Msa0716790 | Msa0799210 | 0.925424 | 1.868861e-90 | -8.615850e-47 |
| Msa0720270 | Msa0799210 | 0.815652 | 8.281983e-52 | -8.615850e-47 |
| Msa0722940 | Msa0799210 | 0.854026 | 1.618673e-61 | -8.615850e-47 |
| Msa0723150 | Msa0799210 | 0.857329 | 1.758422e-62 | -8.615850e-47 |
| Msa0730180 | Msa0799210 | 0.801165 | 1.023915e-48 | -8.615850e-47 |
| Msa0738850 | Msa0799210 | 0.803420 | 3.515291e-49 | -8.615850e-47 |
| Msa0747780 | Msa0799210 | 0.842575 | 2.378821e-58 | -8.615850e-47 |
| Msa0757910 | Msa0799210 | 0.842421 | 2.613483e-58 | -8.615850e-47 |
| Msa0760840 | Msa0799210 | 0.804387 | 2.214099e-49 | -8.615850e-47 |
| Msa0761580 | Msa0799210 | 0.810475 | 1.131577e-50 | -8.615850e-47 |
| Msa0799210 | Msa0803130 | 0.858093 | 1.043596e-62 | -8.615850e-47 |
| Msa0799210 | Msa0810020 | 0.803270 | 3.776651e-49 | -8.615850e-47 |
| Msa0799210 | Msa0841490 | 0.856471 | 3.145998e-62 | -8.615850e-47 |
| Msa0799210 | Msa0843290 | 0.816800 | 4.588183e-52 | -8.615850e-47 |
| Msa0799210 | Msa0843690 | 0.803260 | 3.794315e-49 | -8.615850e-47 |
| Msa0799210 | Msa0859390 | 0.802328 | 5.910441e-49 | -8.615850e-47 |
| Msa0799210 | Msa0859560 | 0.805079 | 1.587256e-49 | -8.615850e-47 |
| Msa0799210 | Msa0862100 | 0.834473 | 2.937918e-56 | -8.615850e-47 |
| Msa0799210 | Msa0863240 | 0.807668 | 4.517405e-50 | -8.615850e-47 |
| Msa0799210 | Msa0872310 | 0.829018 | 6.510301e-55 | -8.615850e-47 |
| Msa0799210 | Msa0873190 | 0.843114 | 1.710134e-58 | -8.615850e-47 |
| Msa0799210 | Msa0890250 | 0.820709 | 5.942186e-53 | -8.615850e-47 |
| Msa0799210 | Msa0903330 | 0.819392 | 1.189863e-52 | -8.615850e-47 |
| Msa0799210 | Msa0905550 | 0.853710 | 1.996504e-61 | -8.615850e-47 |
| Msa0799210 | Msa0906370 | 0.842201 | 2.988667e-58 | -8.615850e-47 |
| Msa0799210 | Msa0907700 | 0.807457 | 5.008517e-50 | -8.615850e-47 |
| Msa0799210 | Msa0922540 | 0.837569 | 4.811309e-57 | -8.615850e-47 |
| Msa0799210 | Msa0925160 | 0.807023 | 6.189077e-50 | -8.615850e-47 |
| Msa0799210 | Msa0930330 | 0.838394 | 2.951331e-57 | -8.615850e-47 |
| Msa0799210 | Msa0931480 | 0.871875 | 4.894218e-67 | -8.615850e-47 |
| Msa0799210 | Msa0931610 | 0.871534 | 6.351957e-67 | -8.615850e-47 |
| Msa0799210 | Msa0937550 | 0.865951 | 4.069034e-65 | -8.615850e-47 |
| Msa0799210 | Msa0938430 | 0.851119 | 1.091888e-60 | -8.615850e-47 |
| Msa0799210 | Msa0942730 | 0.815008 | 1.152149e-51 | -8.615850e-47 |
| Msa0799210 | Msa0951460 | 0.805690 | 1.181731e-49 | -8.615850e-47 |
| Msa0799210 | Msa0951710 | 0.827512 | 1.502055e-54 | -8.615850e-47 |
| Msa0799210 | Msa0955300 | 0.818520 | 1.878467e-52 | -8.615850e-47 |
| Msa0799210 | Msa0955310 | 0.802632 | 5.116112e-49 | -8.615850e-47 |
| Msa0799210 | Msa0958020 | 0.810591 | 1.068309e-50 | -8.615850e-47 |
| Msa0799210 | Msa0974750 | 0.854766 | 9.892959e-62 | -8.615850e-47 |
| Msa0799210 | Msa0975580 | 0.806675 | 7.332357e-50 | -8.615850e-47 |
| Msa0799210 | Msa0988480 | 0.817749 | 2.806559e-52 | -8.615850e-47 |
| Msa0799210 | Msa0990520 | 0.809033 | 2.310541e-50 | -8.615850e-47 |
| Msa0799210 | Msa0996080 | 0.814820 | 1.267952e-51 | -8.615850e-47 |
| Msa0799210 | Msa0996090 | 0.819883 | 9.193705e-53 | -8.615850e-47 |
| Msa0799210 | Msa1002040 | 0.818096 | 2.342469e-52 | -8.615850e-47 |
| Msa0799210 | Msa1004500 | 0.881162 | 3.017322e-70 | -8.615850e-47 |
| Msa0799210 | Msa1004520 | 0.874223 | 7.990131e-68 | -8.615850e-47 |
| Msa0799210 | Msa1007350 | 0.851924 | 6.463157e-61 | -8.615850e-47 |
| Msa0799210 | Msa1014270 | 0.840914 | 6.524903e-58 | -8.615850e-47 |
| Msa0799210 | Msa1018790 | 0.847962 | 8.293712e-60 | -8.615850e-47 |
| Msa0799210 | Msa1022310 | 0.805323 | 1.411045e-49 | -8.615850e-47 |
| Msa0799210 | Msa1027790 | 0.824494 | 7.830340e-54 | -8.615850e-47 |
| Msa0799210 | Msa1041530 | 0.831457 | 1.651423e-55 | -8.615850e-47 |
| Msa0799210 | Msa1044340 | 0.832055 | 1.176033e-55 | -8.615850e-47 |
| Msa0799210 | Msa1045880 | 0.861158 | 1.248804e-63 | -8.615850e-47 |
| Msa0799210 | Msa1045970 | 0.865144 | 7.306159e-65 | -8.615850e-47 |
| Msa0799210 | Msa1046870 | 0.879770 | 9.495423e-70 | -8.615850e-47 |
| Msa0799210 | Msa1048710 | 0.802423 | 5.650930e-49 | -8.615850e-47 |
| Msa0799210 | Msa1055260 | 0.835270 | 1.850173e-56 | -8.615850e-47 |
| Msa0799210 | Msa1055280 | 0.824819 | 6.566107e-54 | -8.615850e-47 |
| Msa0799210 | Msa1055500 | 0.813056 | 3.105396e-51 | -8.615850e-47 |
| Msa0799210 | Msa1061180 | 0.825550 | 4.410169e-54 | -8.615850e-47 |
| Msa0799210 | Msa1061920 | 0.820870 | 5.456527e-53 | -8.615850e-47 |
| Msa0799210 | Msa1073840 | 0.804228 | 2.389306e-49 | -8.615850e-47 |
| Msa0799210 | Msa1081570 | 0.808620 | 2.831464e-50 | -8.615850e-47 |
| Msa0799210 | Msa1100700 | 0.826699 | 2.351102e-54 | -8.615850e-47 |
| Msa0799210 | Msa1106560 | 0.817955 | 2.521664e-52 | -8.615850e-47 |
| Msa0799210 | Msa1106810 | 0.811096 | 8.306375e-51 | -8.615850e-47 |
| Msa0799210 | Msa1107440 | 0.814928 | 1.199694e-51 | -8.615850e-47 |
| Msa0799210 | Msa1112610 | 0.827162 | 1.821940e-54 | -8.615850e-47 |
| Msa0799210 | Msa1123880 | 0.809488 | 1.845746e-50 | -8.615850e-47 |
| Msa0799210 | Msa1127140 | 0.817132 | 3.863094e-52 | -8.615850e-47 |
| Msa0799210 | Msa1129720 | 0.808168 | 3.535552e-50 | -8.615850e-47 |
| Msa0799210 | Msa1134400 | 0.852228 | 5.298459e-61 | -8.615850e-47 |
| Msa0799210 | Msa1147270 | 0.810590 | 1.068774e-50 | -8.615850e-47 |
| Msa0799210 | Msa1149760 | 0.810743 | 9.901644e-51 | -8.615850e-47 |
| Msa0799210 | Msa1150970 | 0.838399 | 2.943443e-57 | -8.615850e-47 |
| Msa0799210 | Msa1159990 | 0.816974 | 4.192476e-52 | -8.615850e-47 |
| Msa0799210 | Msa1166400 | 0.808213 | 3.458299e-50 | -8.615850e-47 |
| Msa0799210 | Msa1171340 | 0.802280 | 6.046351e-49 | -8.615850e-47 |
| Msa0799210 | Msa1175750 | 0.827292 | 1.695683e-54 | -8.615850e-47 |
| Msa0799210 | Msa1186830 | 0.820179 | 7.864937e-53 | -8.615850e-47 |
| Msa0799210 | Msa1197110 | 0.820133 | 8.055564e-53 | -8.615850e-47 |
| Msa0799210 | Msa1200920 | 0.848605 | 5.509570e-60 | -8.615850e-47 |
| Msa0799210 | Msa1220450 | -0.817565 | 3.087848e-52 | -8.615850e-47 |
| Msa0799210 | Msa1220460 | -0.809138 | 2.194757e-50 | -8.615850e-47 |
| Msa0799210 | Msa1220480 | -0.807773 | 4.290472e-50 | -8.615850e-47 |
| Msa0799210 | Msa1221260 | 0.832020 | 1.199786e-55 | -8.615850e-47 |
| Msa0799210 | Msa1223840 | 0.827108 | 1.877061e-54 | -8.615850e-47 |
| Msa0799210 | Msa1224670 | 0.821775 | 3.375401e-53 | -8.615850e-47 |
| Msa0799210 | Msa1226360 | 0.809228 | 2.099138e-50 | -8.615850e-47 |
| Msa0799210 | Msa1229700 | 0.819968 | 8.789678e-53 | -8.615850e-47 |
| Msa0799210 | Msa1232860 | 0.817809 | 2.719909e-52 | -8.615850e-47 |
| Msa0799210 | Msa1237030 | 0.818126 | 2.305858e-52 | -8.615850e-47 |
| Msa0799210 | Msa1258810 | 0.832817 | 7.614688e-56 | -8.615850e-47 |
| Msa0799210 | Msa1263030 | 0.830921 | 2.236728e-55 | -8.615850e-47 |
| Msa0799210 | Msa1271510 | 0.806728 | 7.145580e-50 | -8.615850e-47 |
| Msa0799210 | Msa1272330 | 0.836003 | 1.206991e-56 | -8.615850e-47 |
| Msa0799210 | Msa1281720 | 0.801611 | 8.296770e-49 | -8.615850e-47 |
| Msa0799210 | Msa1284030 | 0.836940 | 6.971421e-57 | -8.615850e-47 |
| Msa0799210 | Msa1302150 | 0.809198 | 2.130271e-50 | -8.615850e-47 |
| Msa0799210 | Msa1307370 | 0.813191 | 2.900192e-51 | -8.615850e-47 |
| Msa0799210 | Msa1310290 | 0.808640 | 2.803998e-50 | -8.615850e-47 |
| Msa0799210 | Msa1312730 | 0.809358 | 1.968603e-50 | -8.615850e-47 |
| Msa0799210 | Msa1313460 | 0.802105 | 6.569372e-49 | -8.615850e-47 |
| Msa0799210 | Msa1315980 | 0.819363 | 1.208338e-52 | -8.615850e-47 |
| Msa0799210 | Msa1321000 | 0.812075 | 5.088003e-51 | -8.615850e-47 |
| Msa0799210 | Msa1323060 | 0.830087 | 3.578266e-55 | -8.615850e-47 |
| Msa0799210 | Msa1330240 | 0.810814 | 9.560835e-51 | -8.615850e-47 |
| Msa0799210 | Msa1337340 | 0.802759 | 4.816966e-49 | -8.615850e-47 |
| Msa0799210 | Msa1340670 | 0.801988 | 6.942035e-49 | -8.615850e-47 |
| Msa0799210 | Msa1350670 | 0.845691 | 3.467475e-59 | -8.615850e-47 |
| Msa0799210 | Msa1354040 | 0.839447 | 1.576132e-57 | -8.615850e-47 |
| Msa0799210 | Msa1355400 | 0.840546 | 8.146860e-58 | -8.615850e-47 |
| Msa0799210 | Msa1365020 | 0.837897 | 3.962539e-57 | -8.615850e-47 |
| Msa0799210 | Msa1365200 | 0.805982 | 1.026144e-49 | -8.615850e-47 |
| Msa0799210 | Msa1367410 | 0.826141 | 3.193267e-54 | -8.615850e-47 |
| Msa0799210 | Msa1367940 | 0.804152 | 2.477201e-49 | -8.615850e-47 |
| Msa0799210 | Msa1373510 | 0.815548 | 8.739328e-52 | -8.615850e-47 |
| Msa0799210 | Msa1374440 | 0.820246 | 7.590596e-53 | -8.615850e-47 |
| Msa0799210 | Msa1379980 | 0.826907 | 2.095967e-54 | -8.615850e-47 |
| Msa0799210 | Msa1379990 | 0.837552 | 4.858332e-57 | -8.615850e-47 |
| Msa0799210 | Msa1382720 | 0.836786 | 7.629182e-57 | -8.615850e-47 |
| Msa0799210 | Msa1389470 | 0.805558 | 1.259896e-49 | -8.615850e-47 |
| Msa0799210 | Msa1390310 | 0.812125 | 4.962180e-51 | -8.615850e-47 |
| Msa0799210 | Msa1391370 | 0.803468 | 3.436376e-49 | -8.615850e-47 |
| Msa0799210 | Msa1391590 | 0.808710 | 2.709740e-50 | -8.615850e-47 |
| Msa0799210 | Msa1397050 | 0.809243 | 2.083306e-50 | -8.615850e-47 |
| Msa0799210 | Msa1398260 | 0.809957 | 1.463796e-50 | -8.615850e-47 |
| Msa0799210 | Msa1417650 | 0.808481 | 3.032948e-50 | -8.615850e-47 |
| Msa0799210 | Msa1420060 | 0.858542 | 7.670609e-63 | -8.615850e-47 |
| Msa0799210 | Msa1422270 | 0.815722 | 7.993613e-52 | -8.615850e-47 |
| Msa0799210 | Msa1428290 | 0.802987 | 4.321440e-49 | -8.615850e-47 |
| Msa0799210 | Msa1429830 | 0.825646 | 4.185721e-54 | -8.615850e-47 |
| Msa0799210 | Msa1435040 | 0.803449 | 3.467382e-49 | -8.615850e-47 |
| Msa0799210 | Msa1435050 | 0.803596 | 3.232093e-49 | -8.615850e-47 |
| Msa0799210 | Msa1435670 | 0.830873 | 2.297486e-55 | -8.615850e-47 |
| Msa0799210 | Msa1437150 | 0.800377 | 1.483109e-48 | -8.615850e-47 |
| Msa0799210 | Msa1439670 | 0.816569 | 5.168116e-52 | -8.615850e-47 |
| Msa0799210 | Msa1447230 | 0.812140 | 4.925759e-51 | -8.615850e-47 |
| Msa0799210 | Msa1450030 | 0.812893 | 3.371038e-51 | -8.615850e-47 |
| Msa0134130 | Msa0799210 | 0.824040 | 1.001151e-53 | -8.615850e-47 |
| Msa0135980 | Msa0799210 | 0.825710 | 4.041882e-54 | -8.615850e-47 |
| Msa0139900 | Msa0799210 | 0.881772 | 1.818372e-70 | -8.615850e-47 |
| Msa0141430 | Msa0799210 | 0.813021 | 3.160119e-51 | -8.615850e-47 |
| Msa0141670 | Msa0799210 | 0.818174 | 2.248857e-52 | -8.615850e-47 |
| Msa0141830 | Msa0799210 | 0.803403 | 3.544696e-49 | -8.615850e-47 |
| Msa0142870 | Msa0799210 | 0.816827 | 4.523882e-52 | -8.615850e-47 |
| Msa0146020 | Msa0799210 | 0.824113 | 9.621986e-54 | -8.615850e-47 |
| Msa0146470 | Msa0799210 | 0.823776 | 1.154210e-53 | -8.615850e-47 |
| Msa0157020 | Msa0799210 | 0.831086 | 2.037709e-55 | -8.615850e-47 |
| Msa0161200 | Msa0799210 | 0.827853 | 1.243521e-54 | -8.615850e-47 |
| Msa0172350 | Msa0799210 | 0.802631 | 5.119354e-49 | -8.615850e-47 |
| Msa0172960 | Msa0799210 | -0.831865 | 1.309960e-55 | -8.615850e-47 |
| Msa0200970 | Msa0799210 | 0.858240 | 9.436007e-63 | -8.615850e-47 |
| Msa0203160 | Msa0799210 | 0.832701 | 8.134919e-56 | -8.615850e-47 |
| Msa0207000 | Msa0799210 | 0.804518 | 2.078877e-49 | -8.615850e-47 |
| Msa0207180 | Msa0799210 | 0.833405 | 5.435227e-56 | -8.615850e-47 |
| Msa0219190 | Msa0799210 | 0.828123 | 1.070579e-54 | -8.615850e-47 |
| Msa0224690 | Msa0799210 | 0.807685 | 4.480232e-50 | -8.615850e-47 |
| Msa0227500 | Msa0799210 | 0.808848 | 2.531794e-50 | -8.615850e-47 |
| Msa0230400 | Msa0799210 | 0.858993 | 5.622676e-63 | -8.615850e-47 |
| Msa0230550 | Msa0799210 | -0.805237 | 1.471014e-49 | -8.615850e-47 |
| Msa0370600 | Msa0799210 | 0.841819 | 3.770111e-58 | -8.615850e-47 |
| Msa0378340 | Msa0799210 | 0.843852 | 1.086151e-58 | -8.615850e-47 |
| Msa0382560 | Msa0799210 | 0.840877 | 6.674343e-58 | -8.615850e-47 |
| Msa0398590 | Msa0799210 | 0.814252 | 1.693657e-51 | -8.615850e-47 |
| Msa0408640 | Msa0799210 | 0.825728 | 4.002040e-54 | -8.615850e-47 |
| Msa0413930 | Msa0799210 | 0.828380 | 9.285869e-55 | -8.615850e-47 |
| Msa0417630 | Msa0799210 | 0.806160 | 9.415588e-50 | -8.615850e-47 |
| Msa0418200 | Msa0799210 | 0.836008 | 1.203794e-56 | -8.615850e-47 |
| Msa0418220 | Msa0799210 | 0.808447 | 3.082721e-50 | -8.615850e-47 |
| Msa0420070 | Msa0799210 | 0.813411 | 2.594179e-51 | -8.615850e-47 |
| Msa0427520 | Msa0799210 | -0.807964 | 3.907971e-50 | -8.615850e-47 |
| Msa0427690 | Msa0799210 | 0.841152 | 5.649342e-58 | -8.615850e-47 |
| Msa0436450 | Msa0799210 | 0.824284 | 8.773533e-54 | -8.615850e-47 |
| Msa0436460 | Msa0799210 | 0.817473 | 3.237670e-52 | -8.615850e-47 |
| Msa0439780 | Msa0799210 | 0.819395 | 1.188195e-52 | -8.615850e-47 |
| Msa0457870 | Msa0799210 | 0.804709 | 1.896312e-49 | -8.615850e-47 |
| Msa0458110 | Msa0799210 | 0.804036 | 2.619311e-49 | -8.615850e-47 |
| Msa0458950 | Msa0799210 | 0.801161 | 1.025878e-48 | -8.615850e-47 |
| Msa0464540 | Msa0799210 | 0.829166 | 5.993212e-55 | -8.615850e-47 |
| Msa0464630 | Msa0799210 | 0.800232 | 1.587632e-48 | -8.615850e-47 |
| Msa0468610 | Msa0799210 | 0.832334 | 1.002778e-55 | -8.615850e-47 |
| Msa0469970 | Msa0799210 | 0.811473 | 6.880427e-51 | -8.615850e-47 |
| Msa0239660 | Msa0799210 | 0.819136 | 1.360788e-52 | -8.615850e-47 |
| Msa0257310 | Msa0799210 | 0.816561 | 5.191304e-52 | -8.615850e-47 |
| Msa0267760 | Msa0799210 | 0.809512 | 1.823940e-50 | -8.615850e-47 |
| Msa0274780 | Msa0799210 | 0.866347 | 3.046584e-65 | -8.615850e-47 |
| Msa0277640 | Msa0799210 | 0.812470 | 4.171262e-51 | -8.615850e-47 |
| Msa0297920 | Msa0799210 | 0.865909 | 4.193387e-65 | -8.615850e-47 |
| Msa0298240 | Msa0799210 | 0.809487 | 1.847286e-50 | -8.615850e-47 |
| Msa0301180 | Msa0799210 | 0.803612 | 3.207444e-49 | -8.615850e-47 |
| Msa0315480 | Msa0799210 | 0.850108 | 2.100644e-60 | -8.615850e-47 |
| Msa0320540 | Msa0799210 | 0.811064 | 8.438397e-51 | -8.615850e-47 |
| Msa0337850 | Msa0799210 | 0.819411 | 1.177730e-52 | -8.615850e-47 |
| Msa0344070 | Msa0799210 | 0.810997 | 8.727365e-51 | -8.615850e-47 |
| Msa0344580 | Msa0799210 | 0.826677 | 2.379671e-54 | -8.615850e-47 |
| Msa0344640 | Msa0799210 | 0.808353 | 3.228503e-50 | -8.615850e-47 |
| Msa0351510 | Msa0799210 | 0.803915 | 2.775993e-49 | -8.615850e-47 |
| Msa0361260 | Msa0799210 | 0.820559 | 6.433678e-53 | -8.615850e-47 |
| Msa0484690 | Msa0799210 | 0.817625 | 2.992084e-52 | -8.615850e-47 |
| Msa0490300 | Msa0799210 | 0.806988 | 6.295036e-50 | -8.615850e-47 |
| Msa0510230 | Msa0799210 | 0.815304 | 9.902331e-52 | -8.615850e-47 |
| Msa0510440 | Msa0799210 | 0.810619 | 1.053663e-50 | -8.615850e-47 |
| Msa0514490 | Msa0799210 | 0.827559 | 1.463451e-54 | -8.615850e-47 |
| Msa0518520 | Msa0799210 | 0.842835 | 2.028044e-58 | -8.615850e-47 |
| Msa0519200 | Msa0799210 | 0.822051 | 2.913058e-53 | -8.615850e-47 |
| Msa0524090 | Msa0799210 | 0.805078 | 1.587941e-49 | -8.615850e-47 |
| Msa0524210 | Msa0799210 | 0.814105 | 1.825032e-51 | -8.615850e-47 |
| Msa0525240 | Msa0799210 | 0.816333 | 5.838611e-52 | -8.615850e-47 |
| Msa0526700 | Msa0799210 | 0.806678 | 7.319119e-50 | -8.615850e-47 |
| Msa0532840 | Msa0799210 | 0.813748 | 2.187625e-51 | -8.615850e-47 |
| Msa0533010 | Msa0799210 | 0.809223 | 2.104179e-50 | -8.615850e-47 |
| Msa0537270 | Msa0799210 | 0.805911 | 1.062001e-49 | -8.615850e-47 |
| Msa0538260 | Msa0799210 | 0.801585 | 8.400523e-49 | -8.615850e-47 |
| Msa0538570 | Msa0799210 | 0.869954 | 2.101766e-66 | -8.615850e-47 |
| Msa0543850 | Msa0799210 | 0.830793 | 2.403879e-55 | -8.615850e-47 |
| Msa0546740 | Msa0799210 | 0.804285 | 2.324241e-49 | -8.615850e-47 |
| Msa0547050 | Msa0799210 | 0.801105 | 1.053287e-48 | -8.615850e-47 |
| Msa0557630 | Msa0799210 | 0.804036 | 2.619264e-49 | -8.615850e-47 |
| Msa0561510 | Msa0799210 | 0.822915 | 1.834797e-53 | -8.615850e-47 |
| Msa0575250 | Msa0799210 | 0.807139 | 5.847729e-50 | -8.615850e-47 |
| Msa0578900 | Msa0799210 | 0.820992 | 5.115278e-53 | -8.615850e-47 |
| Msa0581340 | Msa0799210 | 0.833184 | 6.171375e-56 | -8.615850e-47 |
| Msa0593710 | Msa0799210 | 0.808320 | 3.281207e-50 | -8.615850e-47 |
| Msa0594390 | Msa0799210 | 0.887414 | 1.457545e-72 | -8.615850e-47 |
| Msa0599690 | Msa0799210 | 0.828177 | 1.039329e-54 | -8.615850e-47 |
| Msa0600390 | Msa0799210 | 0.840211 | 9.970364e-58 | -8.615850e-47 |
| Msa0601110 | Msa0799210 | 0.829302 | 5.553883e-55 | -8.615850e-47 |
| Msa0601120 | Msa0799210 | 0.827618 | 1.416114e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799210 | MtrunA17_Chr5g0404211 | 92.131 | 305 | 24 | 0 | 1 | 305 | 1 | 305 | 0.0 | 584 |
| Msa0799210 | MtrunA17_Chr5g0404141 | 76.206 | 311 | 68 | 1 | 1 | 305 | 1 | 311 | 1.15e-177 | 493 |
| Msa0799210 | MtrunA17_Chr8g0373201 | 62.783 | 309 | 106 | 1 | 1 | 300 | 1 | 309 | 1.32e-141 | 402 |
| Msa0799210 | MtrunA17_Chr5g0404161 | 76.852 | 216 | 44 | 1 | 1 | 210 | 11 | 226 | 8.24e-117 | 335 |
| Msa0799210 | MtrunA17_Chr3g0136411 | 37.319 | 276 | 163 | 5 | 26 | 297 | 32 | 301 | 1.37e-58 | 190 |
| Msa0799210 | MtrunA17_Chr5g0404171 | 91.398 | 93 | 8 | 0 | 211 | 303 | 1 | 93 | 1.46e-57 | 180 |
| Msa0799210 | MtrunA17_Chr5g0426241 | 33.333 | 297 | 178 | 7 | 9 | 296 | 13 | 298 | 4.37e-54 | 178 |
| Msa0799210 | MtrunA17_Chr3g0123881 | 35.593 | 295 | 172 | 7 | 9 | 296 | 15 | 298 | 5.67e-54 | 178 |
| Msa0799210 | MtrunA17_Chr2g0279171 | 32.270 | 282 | 181 | 6 | 19 | 296 | 26 | 301 | 1.30e-48 | 165 |
| Msa0799210 | MtrunA17_Chr8g0382001 | 36.290 | 124 | 73 | 2 | 15 | 138 | 18 | 135 | 5.50e-21 | 87.4 |
| Msa0799210 | MtrunA17_Chr8g0381981 | 29.932 | 147 | 84 | 3 | 169 | 296 | 10 | 156 | 3.12e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799210 | AT2G18360.1 | 55.016 | 309 | 129 | 1 | 1 | 299 | 1 | 309 | 7.29e-127 | 365 |
| Msa0799210 | AT4G36610.1 | 51.923 | 312 | 142 | 1 | 1 | 304 | 1 | 312 | 1.06e-119 | 347 |
| Msa0799210 | AT2G18360.2 | 51.471 | 272 | 122 | 1 | 1 | 262 | 1 | 272 | 1.46e-102 | 301 |
| Msa0799210 | AT5G21950.1 | 35.816 | 282 | 176 | 4 | 18 | 296 | 22 | 301 | 1.25e-56 | 185 |
| Msa0799210 | AT5G21950.6 | 35.816 | 282 | 176 | 4 | 18 | 296 | 74 | 353 | 1.06e-55 | 184 |
| Msa0799210 | AT1G78210.1 | 33.916 | 286 | 179 | 6 | 17 | 296 | 20 | 301 | 8.10e-55 | 181 |
| Msa0799210 | AT4G39955.1 | 32.993 | 294 | 179 | 6 | 13 | 298 | 16 | 299 | 1.26e-51 | 173 |
| Msa0799210 | AT5G21950.7 | 35.887 | 248 | 154 | 4 | 18 | 262 | 22 | 267 | 2.33e-48 | 162 |
| Msa0799210 | AT4G33180.1 | 31.399 | 293 | 180 | 8 | 16 | 296 | 21 | 304 | 8.56e-47 | 160 |
| Msa0799210 | AT5G09430.1 | 30.952 | 294 | 181 | 7 | 15 | 296 | 24 | 307 | 4.67e-44 | 153 |
| Msa0799210 | AT1G17430.1 | 31.597 | 288 | 171 | 9 | 25 | 298 | 56 | 331 | 3.30e-39 | 140 |
| Msa0799210 | AT1G72620.1 | 30.035 | 283 | 182 | 7 | 25 | 299 | 60 | 334 | 3.64e-39 | 140 |
| Msa0799210 | AT5G21950.3 | 34.694 | 196 | 125 | 2 | 18 | 212 | 22 | 215 | 1.26e-34 | 125 |
| Msa0799210 | AT5G21950.2 | 34.694 | 196 | 125 | 2 | 18 | 212 | 22 | 215 | 1.26e-34 | 125 |
| Msa0799210 | AT5G21950.5 | 34.694 | 196 | 125 | 2 | 18 | 212 | 74 | 267 | 6.44e-34 | 125 |
| Msa0799210 | AT5G21950.4 | 34.694 | 196 | 125 | 2 | 18 | 212 | 74 | 267 | 6.44e-34 | 125 |
| Msa0799210 | AT4G33180.2 | 31.707 | 205 | 121 | 6 | 16 | 210 | 21 | 216 | 5.85e-29 | 110 |
Find 82 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATTACCTGTGAAAATTT+TGG | 0.092151 | 5_3:+12296216 | None:intergenic |
| ACAATAGTAACTTATACTTT+AGG | 0.255781 | 5_3:+12295627 | None:intergenic |
| CAATAGTAACTTATACTTTA+GGG | 0.286165 | 5_3:+12295628 | None:intergenic |
| GGCTGGTCATTTGGCTCATC+TGG | 0.296159 | 5_3:-12295804 | Msa0799210:CDS |
| AAGGTACACGTATGAGATTC+TGG | 0.334714 | 5_3:-12297673 | Msa0799210:CDS |
| AAAATCATTGAGCAGGCAAT+TGG | 0.336654 | 5_3:+12297163 | None:intergenic |
| TGGCTTGATGGACTTGGACT+TGG | 0.338171 | 5_3:+12297625 | None:intergenic |
| GTGAACATAATTTGGTCATT+TGG | 0.340509 | 5_3:-12297749 | Msa0799210:CDS |
| GAATATATCAAAGGTGTGTT+TGG | 0.364343 | 5_3:-12295694 | Msa0799210:three_prime_UTR |
| AATAAAGAAGGCTGGTCATT+TGG | 0.368845 | 5_3:-12295813 | Msa0799210:CDS |
| GGCTTGATGGACTTGGACTT+GGG | 0.373325 | 5_3:+12297626 | None:intergenic |
| TACAAGAGTCTTTGATTAGT+AGG | 0.383277 | 5_3:-12297295 | Msa0799210:CDS |
| TGGGGTGGAGAAATGTGTTT+TGG | 0.383408 | 5_3:-12297414 | Msa0799210:CDS |
| AGTTGTAACTGGCTCCGTTT+TGG | 0.386196 | 5_3:-12297321 | Msa0799210:CDS |
| GAGAACCACCACTGGCTTGA+TGG | 0.386783 | 5_3:+12297613 | None:intergenic |
| CTCCACGGCTTCTGCGGTGA+TGG | 0.387211 | 5_3:-12297590 | Msa0799210:CDS |
| CACCACTGGCTTGATGGACT+TGG | 0.394304 | 5_3:+12297619 | None:intergenic |
| TGCAGGATTCTCTTCTTGTT+CGG | 0.394567 | 5_3:-12297261 | Msa0799210:CDS |
| GTTCAAGCTGTAGTTGTAAC+TGG | 0.395281 | 5_3:-12297332 | Msa0799210:CDS |
| TAATTTGGTCATTTGGTAGT+TGG | 0.398888 | 5_3:-12297742 | Msa0799210:CDS |
| TGGAATGGTGGCGTTTAAAA+TGG | 0.401285 | 5_3:-12297375 | Msa0799210:CDS |
| TGAACATGGTGAACATAATT+TGG | 0.408308 | 5_3:-12297757 | Msa0799210:CDS |
| TGGAGCCGCCGAAGAAAATT+AGG | 0.408458 | 5_3:+12297504 | None:intergenic |
| GGCTGAGCTTTATAGTGATC+TGG | 0.412917 | 5_3:-12297354 | Msa0799210:CDS |
| GTTATTGCCATCTTCTATTG+AGG | 0.428516 | 5_3:-12297234 | Msa0799210:CDS |
| ATCTTCTATTGAGGGATTGA+AGG | 0.442559 | 5_3:-12297225 | Msa0799210:CDS |
| TTTATGTTCTGCGCAACCTC+TGG | 0.449101 | 5_3:+12295981 | None:intergenic |
| GTAAGATTTATATTAGTGTT+GGG | 0.449874 | 5_3:+12295588 | None:intergenic |
| CGGAAGAAAGAAACTTCTTC+AGG | 0.453523 | 5_3:+12295756 | None:intergenic |
| TTATTGCCATCTTCTATTGA+GGG | 0.454208 | 5_3:-12297233 | Msa0799210:CDS |
| GTCTTTGATTAGTAGGGCAG+TGG | 0.457317 | 5_3:-12297288 | Msa0799210:CDS |
| AGTAAGATTTATATTAGTGT+TGG | 0.458401 | 5_3:+12295587 | None:intergenic |
| GCAGAGGGGTTAAAGAAACT+TGG | 0.468717 | 5_3:-12297434 | Msa0799210:CDS |
| AACGACCATGTATTTACAAT+AGG | 0.473541 | 5_3:-12295781 | Msa0799210:CDS |
| GGAGCGAAGTGAGCTATTAG+AGG | 0.475327 | 5_3:-12296271 | Msa0799210:CDS |
| TGCAGGTGATGTTCTCGAAT+AGG | 0.486436 | 5_3:-12296296 | Msa0799210:intron |
| TGGATTCAGTTATGGTGGAA+TGG | 0.487428 | 5_3:-12297390 | Msa0799210:CDS |
| TTTGTGTATTCAGAAACATT+TGG | 0.487702 | 5_3:-12297190 | Msa0799210:CDS |
| AAATCATTGAGCAGGCAATT+GGG | 0.488795 | 5_3:+12297164 | None:intergenic |
| ACAAGAGTCTTTGATTAGTA+GGG | 0.490764 | 5_3:-12297294 | Msa0799210:CDS |
| CAAGCAGAGTGTTTGGCAGA+GGG | 0.503609 | 5_3:-12297449 | Msa0799210:CDS |
| AAACACTCTGCTTGAAAAGC+CGG | 0.504345 | 5_3:+12297458 | None:intergenic |
| AACATTTGAAGTAATAAAGA+AGG | 0.507370 | 5_3:-12295825 | Msa0799210:CDS |
| TTGAAAAGCCGGTGATCGGT+CGG | 0.507567 | 5_3:+12297469 | None:intergenic |
| TGAAAAGCCGGTGATCGGTC+GGG | 0.508873 | 5_3:+12297470 | None:intergenic |
| CAGAGGGGTTAAAGAAACTT+GGG | 0.513583 | 5_3:-12297433 | Msa0799210:CDS |
| CCTTTAGAAAATCATTGAGC+AGG | 0.514969 | 5_3:+12297156 | None:intergenic |
| GTCCATCACCGCAGAAGCCG+TGG | 0.517790 | 5_3:+12297588 | None:intergenic |
| TCAAGCAGAGTGTTTGGCAG+AGG | 0.521718 | 5_3:-12297450 | Msa0799210:CDS |
| TTGGTTGGATTCAGTTATGG+TGG | 0.526865 | 5_3:-12297395 | Msa0799210:CDS |
| AGACTCTTGTATAGCCAAAA+CGG | 0.529566 | 5_3:+12297307 | None:intergenic |
| AGGTACACGTATGAGATTCT+GGG | 0.532553 | 5_3:-12297672 | Msa0799210:CDS |
| CTGCTTGAAAAGCCGGTGAT+CGG | 0.535364 | 5_3:+12297465 | None:intergenic |
| CGGTGATGGACTTGCAACAT+GGG | 0.541625 | 5_3:-12297576 | Msa0799210:CDS |
| TTCAATCCCTCAATAGAAGA+TGG | 0.543411 | 5_3:+12297227 | None:intergenic |
| CTTAAAACATTGCAAAGCGA+AGG | 0.544964 | 5_3:-12297821 | Msa0799210:five_prime_UTR |
| GCGGTGATGGACTTGCAACA+TGG | 0.546302 | 5_3:-12297577 | Msa0799210:CDS |
| TCGGTCGGGCTTATCAGTTA+TGG | 0.551880 | 5_3:+12297484 | None:intergenic |
| CCGCCGAAGAAAATTAGGTC+AGG | 0.554011 | 5_3:+12297509 | None:intergenic |
| GTTCTCCTCCACGGCTTCTG+CGG | 0.555958 | 5_3:-12297596 | Msa0799210:CDS |
| GATGCATATATCAGGACGCT+AGG | 0.560135 | 5_3:-12295857 | Msa0799210:intron |
| TTTGAAGTAATAAAGAAGGC+TGG | 0.561474 | 5_3:-12295821 | Msa0799210:CDS |
| CACATCTATGAATATATCAA+AGG | 0.563351 | 5_3:-12295703 | Msa0799210:three_prime_UTR |
| AGTAGGGCAGTGGAAGATGC+AGG | 0.567393 | 5_3:-12297278 | Msa0799210:CDS |
| TTAATTAAACATGGTGAACA+TGG | 0.570656 | 5_3:-12297771 | Msa0799210:exon |
| TGATAAGCCCGACCGATCAC+CGG | 0.571968 | 5_3:-12297477 | Msa0799210:CDS |
| AGGCACCTATTGTAAATACA+TGG | 0.591373 | 5_3:+12295776 | None:intergenic |
| CCGTGGAGGAGAACCACCAC+TGG | 0.606123 | 5_3:+12297605 | None:intergenic |
| TGTACCTTGCTCTATCTCCA+CGG | 0.623766 | 5_3:+12297688 | None:intergenic |
| CCAGTGGTGGTTCTCCTCCA+CGG | 0.625931 | 5_3:-12297605 | Msa0799210:CDS |
| GGTGATGTTCTCGAATAGGA+AGG | 0.637660 | 5_3:-12296292 | Msa0799210:CDS |
| CAAGTCCATCAAGCCAGTGG+TGG | 0.639034 | 5_3:-12297618 | Msa0799210:CDS |
| AAGCAGAGTGTTTGGCAGAG+GGG | 0.643656 | 5_3:-12297448 | Msa0799210:CDS |
| AGTTGGACGATGAAGAATGT+AGG | 0.646491 | 5_3:-12297725 | Msa0799210:CDS |
| CATCACCGCAGAAGCCGTGG+AGG | 0.648231 | 5_3:+12297591 | None:intergenic |
| GTCCAAGTCCATCAAGCCAG+TGG | 0.652930 | 5_3:-12297621 | Msa0799210:CDS |
| AGAAACAAATTAATTAAACA+TGG | 0.654980 | 5_3:-12297780 | Msa0799210:exon |
| ATTCAGTTATGGTGGAATGG+TGG | 0.669440 | 5_3:-12297387 | Msa0799210:CDS |
| TACACCGTGGAGATAGAGCA+AGG | 0.676163 | 5_3:-12297692 | Msa0799210:CDS |
| GGGGTTAAAGAAACTTGGGG+TGG | 0.683398 | 5_3:-12297429 | Msa0799210:CDS |
| AGAGGGGTTAAAGAAACTTG+GGG | 0.711749 | 5_3:-12297432 | Msa0799210:CDS |
| AGGTGTGAAGCTTTACACCG+TGG | 0.765486 | 5_3:-12297705 | Msa0799210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAATAATAATAATAAT+AGG | + | chr5_3:12296604-12296623 | None:intergenic | 0.0% |
| !! | TATAAAATAATAATAATAAT+AGG | + | chr5_3:12296604-12296623 | None:intergenic | 0.0% |
| !!! | AAAAATTGATTGATAATTAA+AGG | + | chr5_3:12296517-12296536 | None:intergenic | 10.0% |
| !!! | TTCTTTTAAAAAAATGTTAT+TGG | - | chr5_3:12296653-12296672 | Msa0799210:intron | 10.0% |
| !!! | TAACTTATCATTTATTTTTA+GGG | + | chr5_3:12296719-12296738 | None:intergenic | 10.0% |
| !!! | TTAACTTATCATTTATTTTT+AGG | + | chr5_3:12296720-12296739 | None:intergenic | 10.0% |
| !! | ATTATTTCAAATCATTATTA+TGG | - | chr5_3:12297494-12297513 | Msa0799210:CDS | 10.0% |
| !!! | ATATTTTATAAGTTATTATC+TGG | - | chr5_3:12297758-12297777 | Msa0799210:CDS | 10.0% |
| !!! | TATTTTATAAGTTATTATCT+GGG | - | chr5_3:12297759-12297778 | Msa0799210:CDS | 10.0% |
| !!! | AAAAATTGATTGATAATTAA+AGG | + | chr5_3:12296517-12296536 | None:intergenic | 10.0% |
| !!! | TTCTTTTAAAAAAATGTTAT+TGG | - | chr5_3:12296653-12296672 | Msa0799210:intron | 10.0% |
| !!! | TAACTTATCATTTATTTTTA+GGG | + | chr5_3:12296719-12296738 | None:intergenic | 10.0% |
| !!! | TTAACTTATCATTTATTTTT+AGG | + | chr5_3:12296720-12296739 | None:intergenic | 10.0% |
| !! | ATTATTTCAAATCATTATTA+TGG | - | chr5_3:12297494-12297513 | Msa0799210:CDS | 10.0% |
| !!! | ATATTTTATAAGTTATTATC+TGG | - | chr5_3:12297758-12297777 | Msa0799210:CDS | 10.0% |
| !!! | TATTTTATAAGTTATTATCT+GGG | - | chr5_3:12297759-12297778 | Msa0799210:CDS | 10.0% |
| !! | AGAAACAAATTAATTAAACA+TGG | - | chr5_3:12295642-12295661 | Msa0799210:three_prime_UTR | 15.0% |
| !!! | AACTTATCATTTATTTTTAG+GGG | + | chr5_3:12296718-12296737 | None:intergenic | 15.0% |
| !!! | GATAATAAAAACTTAAGTTT+TGG | + | chr5_3:12297344-12297363 | None:intergenic | 15.0% |
| !! | AGAAACAAATTAATTAAACA+TGG | - | chr5_3:12295642-12295661 | Msa0799210:three_prime_UTR | 15.0% |
| !!! | AACTTATCATTTATTTTTAG+GGG | + | chr5_3:12296718-12296737 | None:intergenic | 15.0% |
| !!! | GATAATAAAAACTTAAGTTT+TGG | + | chr5_3:12297344-12297363 | None:intergenic | 15.0% |
| !! | TTTGACAAAAAAAAAGATTG+TGG | + | chr5_3:12296351-12296370 | None:intergenic | 20.0% |
| !! | AATTGCAGAAAGATAATTAA+AGG | - | chr5_3:12296540-12296559 | Msa0799210:intron | 20.0% |
| !! | ATTGCAGAAAGATAATTAAA+GGG | - | chr5_3:12296541-12296560 | Msa0799210:intron | 20.0% |
| !! | AAAGATAATTAAAGGGTTAT+TGG | - | chr5_3:12296548-12296567 | Msa0799210:intron | 20.0% |
| !! | AACATTATATCATTAATTGC+AGG | - | chr5_3:12297109-12297128 | Msa0799210:intron | 20.0% |
| !!! | AAATTACCTGTGAAAATTTT+GGG | + | chr5_3:12297208-12297227 | None:intergenic | 20.0% |
| !!! | TAAATTACCTGTGAAAATTT+TGG | + | chr5_3:12297209-12297228 | None:intergenic | 20.0% |
| !! | TTGAAATAATTATAACTACG+TGG | + | chr5_3:12297484-12297503 | None:intergenic | 20.0% |
| !!! | AACATTTGAAGTAATAAAGA+AGG | - | chr5_3:12297597-12297616 | Msa0799210:CDS | 20.0% |
| !! | CAATAGTAACTTATACTTTA+GGG | + | chr5_3:12297797-12297816 | None:intergenic | 20.0% |
| !! | ACAATAGTAACTTATACTTT+AGG | + | chr5_3:12297798-12297817 | None:intergenic | 20.0% |
| !! | TTTGACAAAAAAAAAGATTG+TGG | + | chr5_3:12296351-12296370 | None:intergenic | 20.0% |
| !! | AATTGCAGAAAGATAATTAA+AGG | - | chr5_3:12296540-12296559 | Msa0799210:intron | 20.0% |
| !! | ATTGCAGAAAGATAATTAAA+GGG | - | chr5_3:12296541-12296560 | Msa0799210:intron | 20.0% |
| !! | AAAGATAATTAAAGGGTTAT+TGG | - | chr5_3:12296548-12296567 | Msa0799210:intron | 20.0% |
| !! | AACATTATATCATTAATTGC+AGG | - | chr5_3:12297109-12297128 | Msa0799210:intron | 20.0% |
| !!! | AAATTACCTGTGAAAATTTT+GGG | + | chr5_3:12297208-12297227 | None:intergenic | 20.0% |
| !!! | TAAATTACCTGTGAAAATTT+TGG | + | chr5_3:12297209-12297228 | None:intergenic | 20.0% |
| !! | TTGAAATAATTATAACTACG+TGG | + | chr5_3:12297484-12297503 | None:intergenic | 20.0% |
| !!! | AACATTTGAAGTAATAAAGA+AGG | - | chr5_3:12297597-12297616 | Msa0799210:CDS | 20.0% |
| !! | CAATAGTAACTTATACTTTA+GGG | + | chr5_3:12297797-12297816 | None:intergenic | 20.0% |
| !! | ACAATAGTAACTTATACTTT+AGG | + | chr5_3:12297798-12297817 | None:intergenic | 20.0% |
| ! | TTAATTAAACATGGTGAACA+TGG | - | chr5_3:12295651-12295670 | Msa0799210:three_prime_UTR | 25.0% |
| ! | TTTGTGTATTCAGAAACATT+TGG | - | chr5_3:12296232-12296251 | Msa0799210:CDS | 25.0% |
| ! | TTGTTAAACAAATGTATGCA+AGG | - | chr5_3:12296488-12296507 | Msa0799210:intron | 25.0% |
| ! | TTTGATGAGACAACAAAATA+TGG | - | chr5_3:12296683-12296702 | Msa0799210:intron | 25.0% |
| ! | AAAAAATGATGTGTACATGT+AGG | - | chr5_3:12296783-12296802 | Msa0799210:intron | 25.0% |
| !!! | TTAATTTTGAGGTCTTAAAC+CGG | + | chr5_3:12296810-12296829 | None:intergenic | 25.0% |
| !!! | ATTTTGAGGTCTTAATTTTG+AGG | + | chr5_3:12296821-12296840 | None:intergenic | 25.0% |
| ! | AAATTAAGACCTCAAAATGA+TGG | - | chr5_3:12296823-12296842 | Msa0799210:intron | 25.0% |
| ! | AATTAAGACCTCAAAATGAT+GGG | - | chr5_3:12296824-12296843 | Msa0799210:intron | 25.0% |
| !!! | AACTTAAGTTTTGGAAGAAT+GGG | + | chr5_3:12297335-12297354 | None:intergenic | 25.0% |
| !!! | AAACTTAAGTTTTGGAAGAA+TGG | + | chr5_3:12297336-12297355 | None:intergenic | 25.0% |
| !! | AGATAAAATTTTCAAACCAG+AGG | - | chr5_3:12297425-12297444 | Msa0799210:CDS | 25.0% |
| ! | GTGATCAAGATAAACTTTAA+AGG | + | chr5_3:12297530-12297549 | None:intergenic | 25.0% |
| ! | TAATTGTTGATGCATATATC+AGG | - | chr5_3:12297557-12297576 | Msa0799210:CDS | 25.0% |
| !! | TTTTCTTTCATCAAGCATAA+CGG | + | chr5_3:12297689-12297708 | None:intergenic | 25.0% |
| ! | CACATCTATGAATATATCAA+AGG | - | chr5_3:12297719-12297738 | Msa0799210:CDS | 25.0% |
| ! | TTAATTAAACATGGTGAACA+TGG | - | chr5_3:12295651-12295670 | Msa0799210:three_prime_UTR | 25.0% |
| ! | TTTGTGTATTCAGAAACATT+TGG | - | chr5_3:12296232-12296251 | Msa0799210:CDS | 25.0% |
| ! | TTGTTAAACAAATGTATGCA+AGG | - | chr5_3:12296488-12296507 | Msa0799210:intron | 25.0% |
| ! | TTTGATGAGACAACAAAATA+TGG | - | chr5_3:12296683-12296702 | Msa0799210:intron | 25.0% |
| ! | AAAAAATGATGTGTACATGT+AGG | - | chr5_3:12296783-12296802 | Msa0799210:intron | 25.0% |
| !!! | TTAATTTTGAGGTCTTAAAC+CGG | + | chr5_3:12296810-12296829 | None:intergenic | 25.0% |
| !!! | ATTTTGAGGTCTTAATTTTG+AGG | + | chr5_3:12296821-12296840 | None:intergenic | 25.0% |
| ! | AAATTAAGACCTCAAAATGA+TGG | - | chr5_3:12296823-12296842 | Msa0799210:intron | 25.0% |
| ! | AATTAAGACCTCAAAATGAT+GGG | - | chr5_3:12296824-12296843 | Msa0799210:intron | 25.0% |
| !!! | AACTTAAGTTTTGGAAGAAT+GGG | + | chr5_3:12297335-12297354 | None:intergenic | 25.0% |
| !!! | AAACTTAAGTTTTGGAAGAA+TGG | + | chr5_3:12297336-12297355 | None:intergenic | 25.0% |
| !! | AGATAAAATTTTCAAACCAG+AGG | - | chr5_3:12297425-12297444 | Msa0799210:CDS | 25.0% |
| ! | GTGATCAAGATAAACTTTAA+AGG | + | chr5_3:12297530-12297549 | None:intergenic | 25.0% |
| ! | TAATTGTTGATGCATATATC+AGG | - | chr5_3:12297557-12297576 | Msa0799210:CDS | 25.0% |
| !! | TTTTCTTTCATCAAGCATAA+CGG | + | chr5_3:12297689-12297708 | None:intergenic | 25.0% |
| ! | CACATCTATGAATATATCAA+AGG | - | chr5_3:12297719-12297738 | Msa0799210:CDS | 25.0% |
| TGAACATGGTGAACATAATT+TGG | - | chr5_3:12295665-12295684 | Msa0799210:three_prime_UTR | 30.0% | |
| GTGAACATAATTTGGTCATT+TGG | - | chr5_3:12295673-12295692 | Msa0799210:three_prime_UTR | 30.0% | |
| ! | TAATTTGGTCATTTGGTAGT+TGG | - | chr5_3:12295680-12295699 | Msa0799210:three_prime_UTR | 30.0% |
| !!! | GGCTTTGAAATAGTTTTAGA+TGG | + | chr5_3:12295778-12295797 | None:intergenic | 30.0% |
| TACAAGAGTCTTTGATTAGT+AGG | - | chr5_3:12296127-12296146 | Msa0799210:intron | 30.0% | |
| ACAAGAGTCTTTGATTAGTA+GGG | - | chr5_3:12296128-12296147 | Msa0799210:intron | 30.0% | |
| TTATTGCCATCTTCTATTGA+GGG | - | chr5_3:12296189-12296208 | Msa0799210:intron | 30.0% | |
| !! | TGTTTTTACAATCATGGCTA+AGG | + | chr5_3:12296927-12296946 | None:intergenic | 30.0% |
| CCATAAATACCTATAGAGAT+GGG | + | chr5_3:12296950-12296969 | None:intergenic | 30.0% | |
| !!! | CTCTAACACTCTTTGTTTTA+CGG | - | chr5_3:12297244-12297263 | Msa0799210:CDS | 30.0% |
| !!! | TCTAACACTCTTTGTTTTAC+GGG | - | chr5_3:12297245-12297264 | Msa0799210:CDS | 30.0% |
| ! | TTTGAAGTAATAAAGAAGGC+TGG | - | chr5_3:12297601-12297620 | Msa0799210:CDS | 30.0% |
| AACGACCATGTATTTACAAT+AGG | - | chr5_3:12297641-12297660 | Msa0799210:CDS | 30.0% | |
| ! | GAATATATCAAAGGTGTGTT+TGG | - | chr5_3:12297728-12297747 | Msa0799210:CDS | 30.0% |
| TGAACATGGTGAACATAATT+TGG | - | chr5_3:12295665-12295684 | Msa0799210:three_prime_UTR | 30.0% | |
| GTGAACATAATTTGGTCATT+TGG | - | chr5_3:12295673-12295692 | Msa0799210:three_prime_UTR | 30.0% | |
| ! | TAATTTGGTCATTTGGTAGT+TGG | - | chr5_3:12295680-12295699 | Msa0799210:three_prime_UTR | 30.0% |
| !!! | GGCTTTGAAATAGTTTTAGA+TGG | + | chr5_3:12295778-12295797 | None:intergenic | 30.0% |
| TACAAGAGTCTTTGATTAGT+AGG | - | chr5_3:12296127-12296146 | Msa0799210:intron | 30.0% | |
| ACAAGAGTCTTTGATTAGTA+GGG | - | chr5_3:12296128-12296147 | Msa0799210:intron | 30.0% | |
| TTATTGCCATCTTCTATTGA+GGG | - | chr5_3:12296189-12296208 | Msa0799210:intron | 30.0% | |
| !! | TGTTTTTACAATCATGGCTA+AGG | + | chr5_3:12296927-12296946 | None:intergenic | 30.0% |
| CCATAAATACCTATAGAGAT+GGG | + | chr5_3:12296950-12296969 | None:intergenic | 30.0% | |
| !!! | CTCTAACACTCTTTGTTTTA+CGG | - | chr5_3:12297244-12297263 | Msa0799210:CDS | 30.0% |
| !!! | TCTAACACTCTTTGTTTTAC+GGG | - | chr5_3:12297245-12297264 | Msa0799210:CDS | 30.0% |
| ! | TTTGAAGTAATAAAGAAGGC+TGG | - | chr5_3:12297601-12297620 | Msa0799210:CDS | 30.0% |
| AACGACCATGTATTTACAAT+AGG | - | chr5_3:12297641-12297660 | Msa0799210:CDS | 30.0% | |
| ! | GAATATATCAAAGGTGTGTT+TGG | - | chr5_3:12297728-12297747 | Msa0799210:CDS | 30.0% |
| CTTAAAACATTGCAAAGCGA+AGG | - | chr5_3:12295601-12295620 | Msa0799210:three_prime_UTR | 35.0% | |
| ! | GTACCTGACCTAATTTTCTT+CGG | - | chr5_3:12295910-12295929 | Msa0799210:intron | 35.0% |
| !!! | GTTTTGGTTGGATTCAGTTA+TGG | - | chr5_3:12296024-12296043 | Msa0799210:CDS | 35.0% |
| AGACTCTTGTATAGCCAAAA+CGG | + | chr5_3:12296118-12296137 | None:intergenic | 35.0% | |
| GTTATTGCCATCTTCTATTG+AGG | - | chr5_3:12296188-12296207 | Msa0799210:intron | 35.0% | |
| TTCAATCCCTCAATAGAAGA+TGG | + | chr5_3:12296198-12296217 | None:intergenic | 35.0% | |
| ATCTTCTATTGAGGGATTGA+AGG | - | chr5_3:12296197-12296216 | Msa0799210:intron | 35.0% | |
| AAATCATTGAGCAGGCAATT+GGG | + | chr5_3:12296261-12296280 | None:intergenic | 35.0% | |
| AAAATCATTGAGCAGGCAAT+TGG | + | chr5_3:12296262-12296281 | None:intergenic | 35.0% | |
| ! | CCTTTAGAAAATCATTGAGC+AGG | + | chr5_3:12296269-12296288 | None:intergenic | 35.0% |
| ! | CCTGCTCAATGATTTTCTAA+AGG | - | chr5_3:12296266-12296285 | Msa0799210:CDS | 35.0% |
| GGAAAAAAAACTCTCCAAAG+CGG | - | chr5_3:12296853-12296872 | Msa0799210:intron | 35.0% | |
| !! | AGCATTTTAGGTGGTGAAAA+AGG | - | chr5_3:12296890-12296909 | Msa0799210:intron | 35.0% |
| !! | GCATTTTAGGTGGTGAAAAA+GGG | - | chr5_3:12296891-12296910 | Msa0799210:intron | 35.0% |
| !! | CATTTTAGGTGGTGAAAAAG+GGG | - | chr5_3:12296892-12296911 | Msa0799210:intron | 35.0% |
| !! | GATGGGTGTTTTTACAATCA+TGG | + | chr5_3:12296933-12296952 | None:intergenic | 35.0% |
| GTAAAAACACCCATCTCTAT+AGG | - | chr5_3:12296938-12296957 | Msa0799210:intron | 35.0% | |
| CCCATCTCTATAGGTATTTA+TGG | - | chr5_3:12296947-12296966 | Msa0799210:intron | 35.0% | |
| GCCATAAATACCTATAGAGA+TGG | + | chr5_3:12296951-12296970 | None:intergenic | 35.0% | |
| ATAGGTATTTATGGCCACAA+TGG | - | chr5_3:12296956-12296975 | Msa0799210:intron | 35.0% | |
| TAGGTATTTATGGCCACAAT+GGG | - | chr5_3:12296957-12296976 | Msa0799210:intron | 35.0% | |
| TTTCCTATTAGAACCCATTG+TGG | + | chr5_3:12296973-12296992 | None:intergenic | 35.0% | |
| CTAATAGGAAAGAGCAAACT+AGG | - | chr5_3:12296982-12297001 | Msa0799210:intron | 35.0% | |
| ! | CAATGTCCCAAAATTTTCAC+AGG | - | chr5_3:12297199-12297218 | Msa0799210:CDS | 35.0% |
| ! | TGCAGCGAATACATCTTTTA+TGG | - | chr5_3:12297394-12297413 | Msa0799210:CDS | 35.0% |
| ! | GCAGCGAATACATCTTTTAT+GGG | - | chr5_3:12297395-12297414 | Msa0799210:CDS | 35.0% |
| ! | CAGCGAATACATCTTTTATG+GGG | - | chr5_3:12297396-12297415 | Msa0799210:CDS | 35.0% |
| ! | AATAAAGAAGGCTGGTCATT+TGG | - | chr5_3:12297609-12297628 | Msa0799210:CDS | 35.0% |
| AGGCACCTATTGTAAATACA+TGG | + | chr5_3:12297649-12297668 | None:intergenic | 35.0% | |
| CTTAAAACATTGCAAAGCGA+AGG | - | chr5_3:12295601-12295620 | Msa0799210:three_prime_UTR | 35.0% | |
| ! | GTACCTGACCTAATTTTCTT+CGG | - | chr5_3:12295910-12295929 | Msa0799210:intron | 35.0% |
| !!! | GTTTTGGTTGGATTCAGTTA+TGG | - | chr5_3:12296024-12296043 | Msa0799210:CDS | 35.0% |
| AGACTCTTGTATAGCCAAAA+CGG | + | chr5_3:12296118-12296137 | None:intergenic | 35.0% | |
| GTTATTGCCATCTTCTATTG+AGG | - | chr5_3:12296188-12296207 | Msa0799210:intron | 35.0% | |
| TTCAATCCCTCAATAGAAGA+TGG | + | chr5_3:12296198-12296217 | None:intergenic | 35.0% | |
| ATCTTCTATTGAGGGATTGA+AGG | - | chr5_3:12296197-12296216 | Msa0799210:intron | 35.0% | |
| AAATCATTGAGCAGGCAATT+GGG | + | chr5_3:12296261-12296280 | None:intergenic | 35.0% | |
| AAAATCATTGAGCAGGCAAT+TGG | + | chr5_3:12296262-12296281 | None:intergenic | 35.0% | |
| ! | CCTTTAGAAAATCATTGAGC+AGG | + | chr5_3:12296269-12296288 | None:intergenic | 35.0% |
| ! | CCTGCTCAATGATTTTCTAA+AGG | - | chr5_3:12296266-12296285 | Msa0799210:CDS | 35.0% |
| GGAAAAAAAACTCTCCAAAG+CGG | - | chr5_3:12296853-12296872 | Msa0799210:intron | 35.0% | |
| !! | AGCATTTTAGGTGGTGAAAA+AGG | - | chr5_3:12296890-12296909 | Msa0799210:intron | 35.0% |
| !! | GCATTTTAGGTGGTGAAAAA+GGG | - | chr5_3:12296891-12296910 | Msa0799210:intron | 35.0% |
| !! | CATTTTAGGTGGTGAAAAAG+GGG | - | chr5_3:12296892-12296911 | Msa0799210:intron | 35.0% |
| !! | GATGGGTGTTTTTACAATCA+TGG | + | chr5_3:12296933-12296952 | None:intergenic | 35.0% |
| GTAAAAACACCCATCTCTAT+AGG | - | chr5_3:12296938-12296957 | Msa0799210:intron | 35.0% | |
| CCCATCTCTATAGGTATTTA+TGG | - | chr5_3:12296947-12296966 | Msa0799210:intron | 35.0% | |
| GCCATAAATACCTATAGAGA+TGG | + | chr5_3:12296951-12296970 | None:intergenic | 35.0% | |
| ATAGGTATTTATGGCCACAA+TGG | - | chr5_3:12296956-12296975 | Msa0799210:intron | 35.0% | |
| TAGGTATTTATGGCCACAAT+GGG | - | chr5_3:12296957-12296976 | Msa0799210:intron | 35.0% | |
| TTTCCTATTAGAACCCATTG+TGG | + | chr5_3:12296973-12296992 | None:intergenic | 35.0% | |
| CTAATAGGAAAGAGCAAACT+AGG | - | chr5_3:12296982-12297001 | Msa0799210:intron | 35.0% | |
| ! | CAATGTCCCAAAATTTTCAC+AGG | - | chr5_3:12297199-12297218 | Msa0799210:CDS | 35.0% |
| ! | TGCAGCGAATACATCTTTTA+TGG | - | chr5_3:12297394-12297413 | Msa0799210:CDS | 35.0% |
| ! | GCAGCGAATACATCTTTTAT+GGG | - | chr5_3:12297395-12297414 | Msa0799210:CDS | 35.0% |
| ! | CAGCGAATACATCTTTTATG+GGG | - | chr5_3:12297396-12297415 | Msa0799210:CDS | 35.0% |
| ! | AATAAAGAAGGCTGGTCATT+TGG | - | chr5_3:12297609-12297628 | Msa0799210:CDS | 35.0% |
| AGGCACCTATTGTAAATACA+TGG | + | chr5_3:12297649-12297668 | None:intergenic | 35.0% | |
| AGTTGGACGATGAAGAATGT+AGG | - | chr5_3:12295697-12295716 | Msa0799210:three_prime_UTR | 40.0% | |
| AAGGTACACGTATGAGATTC+TGG | - | chr5_3:12295749-12295768 | Msa0799210:CDS | 40.0% | |
| AGGTACACGTATGAGATTCT+GGG | - | chr5_3:12295750-12295769 | Msa0799210:CDS | 40.0% | |
| AAACACTCTGCTTGAAAAGC+CGG | + | chr5_3:12295967-12295986 | None:intergenic | 40.0% | |
| CAGAGGGGTTAAAGAAACTT+GGG | - | chr5_3:12295989-12296008 | Msa0799210:CDS | 40.0% | |
| AGAGGGGTTAAAGAAACTTG+GGG | - | chr5_3:12295990-12296009 | Msa0799210:CDS | 40.0% | |
| !!! | GTGGAGAAATGTGTTTTGGT+TGG | - | chr5_3:12296012-12296031 | Msa0799210:CDS | 40.0% |
| TTGGTTGGATTCAGTTATGG+TGG | - | chr5_3:12296027-12296046 | Msa0799210:intron | 40.0% | |
| ! | TGGATTCAGTTATGGTGGAA+TGG | - | chr5_3:12296032-12296051 | Msa0799210:intron | 40.0% |
| ! | ATTCAGTTATGGTGGAATGG+TGG | - | chr5_3:12296035-12296054 | Msa0799210:intron | 40.0% |
| ! | TGGAATGGTGGCGTTTAAAA+TGG | - | chr5_3:12296047-12296066 | Msa0799210:intron | 40.0% |
| GTTCAAGCTGTAGTTGTAAC+TGG | - | chr5_3:12296090-12296109 | Msa0799210:intron | 40.0% | |
| TGCAGGATTCTCTTCTTGTT+CGG | - | chr5_3:12296161-12296180 | Msa0799210:intron | 40.0% | |
| ATGATGTGTACATGTAGGAC+CGG | - | chr5_3:12296788-12296807 | Msa0799210:intron | 40.0% | |
| ! | CCAATGTACCCATCATTTTG+AGG | + | chr5_3:12296835-12296854 | None:intergenic | 40.0% |
| !! | CCTCAAAATGATGGGTACAT+TGG | - | chr5_3:12296832-12296851 | Msa0799210:intron | 40.0% |
| !!! | GATGAGATGGAGAGCATTTT+AGG | - | chr5_3:12296878-12296897 | Msa0799210:intron | 40.0% |
| TGCGCAGAACATAAAAGAGT+AGG | - | chr5_3:12297449-12297468 | Msa0799210:CDS | 40.0% | |
| CGGAAGAAAGAAACTTCTTC+AGG | + | chr5_3:12297669-12297688 | None:intergenic | 40.0% | |
| AGTTGGACGATGAAGAATGT+AGG | - | chr5_3:12295697-12295716 | Msa0799210:three_prime_UTR | 40.0% | |
| AAGGTACACGTATGAGATTC+TGG | - | chr5_3:12295749-12295768 | Msa0799210:CDS | 40.0% | |
| AGGTACACGTATGAGATTCT+GGG | - | chr5_3:12295750-12295769 | Msa0799210:CDS | 40.0% | |
| AAACACTCTGCTTGAAAAGC+CGG | + | chr5_3:12295967-12295986 | None:intergenic | 40.0% | |
| CAGAGGGGTTAAAGAAACTT+GGG | - | chr5_3:12295989-12296008 | Msa0799210:CDS | 40.0% | |
| AGAGGGGTTAAAGAAACTTG+GGG | - | chr5_3:12295990-12296009 | Msa0799210:CDS | 40.0% | |
| !!! | GTGGAGAAATGTGTTTTGGT+TGG | - | chr5_3:12296012-12296031 | Msa0799210:CDS | 40.0% |
| TTGGTTGGATTCAGTTATGG+TGG | - | chr5_3:12296027-12296046 | Msa0799210:intron | 40.0% | |
| ! | TGGATTCAGTTATGGTGGAA+TGG | - | chr5_3:12296032-12296051 | Msa0799210:intron | 40.0% |
| ! | ATTCAGTTATGGTGGAATGG+TGG | - | chr5_3:12296035-12296054 | Msa0799210:intron | 40.0% |
| ! | TGGAATGGTGGCGTTTAAAA+TGG | - | chr5_3:12296047-12296066 | Msa0799210:intron | 40.0% |
| GTTCAAGCTGTAGTTGTAAC+TGG | - | chr5_3:12296090-12296109 | Msa0799210:intron | 40.0% | |
| TGCAGGATTCTCTTCTTGTT+CGG | - | chr5_3:12296161-12296180 | Msa0799210:intron | 40.0% | |
| ATGATGTGTACATGTAGGAC+CGG | - | chr5_3:12296788-12296807 | Msa0799210:intron | 40.0% | |
| ! | CCAATGTACCCATCATTTTG+AGG | + | chr5_3:12296835-12296854 | None:intergenic | 40.0% |
| !! | CCTCAAAATGATGGGTACAT+TGG | - | chr5_3:12296832-12296851 | Msa0799210:intron | 40.0% |
| !!! | GATGAGATGGAGAGCATTTT+AGG | - | chr5_3:12296878-12296897 | Msa0799210:intron | 40.0% |
| TGCGCAGAACATAAAAGAGT+AGG | - | chr5_3:12297449-12297468 | Msa0799210:CDS | 40.0% | |
| CGGAAGAAAGAAACTTCTTC+AGG | + | chr5_3:12297669-12297688 | None:intergenic | 40.0% | |
| TGTACCTTGCTCTATCTCCA+CGG | + | chr5_3:12295737-12295756 | None:intergenic | 45.0% | |
| ! | CCTGACCTAATTTTCTTCGG+CGG | - | chr5_3:12295913-12295932 | Msa0799210:intron | 45.0% |
| !! | GGCTTTTCAAGCAGAGTGTT+TGG | - | chr5_3:12295966-12295985 | Msa0799210:intron | 45.0% |
| GCAGAGGGGTTAAAGAAACT+TGG | - | chr5_3:12295988-12296007 | Msa0799210:CDS | 45.0% | |
| ! | TGGGGTGGAGAAATGTGTTT+TGG | - | chr5_3:12296008-12296027 | Msa0799210:CDS | 45.0% |
| ! | GGCTGAGCTTTATAGTGATC+TGG | - | chr5_3:12296068-12296087 | Msa0799210:intron | 45.0% |
| !! | AGTTGTAACTGGCTCCGTTT+TGG | - | chr5_3:12296101-12296120 | Msa0799210:intron | 45.0% |
| GTCTTTGATTAGTAGGGCAG+TGG | - | chr5_3:12296134-12296153 | Msa0799210:intron | 45.0% | |
| !!! | GAGATGGAGAGCATTTTAGG+TGG | - | chr5_3:12296881-12296900 | Msa0799210:intron | 45.0% |
| ! | TGGCCACAATGGGTTCTAAT+AGG | - | chr5_3:12296967-12296986 | Msa0799210:intron | 45.0% |
| TGCAGGTGATGTTCTCGAAT+AGG | - | chr5_3:12297126-12297145 | Msa0799210:intron | 45.0% | |
| GGTGATGTTCTCGAATAGGA+AGG | - | chr5_3:12297130-12297149 | Msa0799210:intron | 45.0% | |
| TTTATGTTCTGCGCAACCTC+TGG | + | chr5_3:12297444-12297463 | None:intergenic | 45.0% | |
| GATGCATATATCAGGACGCT+AGG | - | chr5_3:12297565-12297584 | Msa0799210:CDS | 45.0% | |
| TGTACCTTGCTCTATCTCCA+CGG | + | chr5_3:12295737-12295756 | None:intergenic | 45.0% | |
| ! | CCTGACCTAATTTTCTTCGG+CGG | - | chr5_3:12295913-12295932 | Msa0799210:intron | 45.0% |
| !! | GGCTTTTCAAGCAGAGTGTT+TGG | - | chr5_3:12295966-12295985 | Msa0799210:intron | 45.0% |
| GCAGAGGGGTTAAAGAAACT+TGG | - | chr5_3:12295988-12296007 | Msa0799210:CDS | 45.0% | |
| ! | TGGGGTGGAGAAATGTGTTT+TGG | - | chr5_3:12296008-12296027 | Msa0799210:CDS | 45.0% |
| ! | GGCTGAGCTTTATAGTGATC+TGG | - | chr5_3:12296068-12296087 | Msa0799210:intron | 45.0% |
| !! | AGTTGTAACTGGCTCCGTTT+TGG | - | chr5_3:12296101-12296120 | Msa0799210:intron | 45.0% |
| GTCTTTGATTAGTAGGGCAG+TGG | - | chr5_3:12296134-12296153 | Msa0799210:intron | 45.0% | |
| !!! | GAGATGGAGAGCATTTTAGG+TGG | - | chr5_3:12296881-12296900 | Msa0799210:intron | 45.0% |
| ! | TGGCCACAATGGGTTCTAAT+AGG | - | chr5_3:12296967-12296986 | Msa0799210:intron | 45.0% |
| TGCAGGTGATGTTCTCGAAT+AGG | - | chr5_3:12297126-12297145 | Msa0799210:intron | 45.0% | |
| GGTGATGTTCTCGAATAGGA+AGG | - | chr5_3:12297130-12297149 | Msa0799210:intron | 45.0% | |
| TTTATGTTCTGCGCAACCTC+TGG | + | chr5_3:12297444-12297463 | None:intergenic | 45.0% | |
| GATGCATATATCAGGACGCT+AGG | - | chr5_3:12297565-12297584 | Msa0799210:CDS | 45.0% | |
| AGGTGTGAAGCTTTACACCG+TGG | - | chr5_3:12295717-12295736 | Msa0799210:exon | 50.0% | |
| TACACCGTGGAGATAGAGCA+AGG | - | chr5_3:12295730-12295749 | Msa0799210:exon | 50.0% | |
| !! | GGCTTGATGGACTTGGACTT+GGG | + | chr5_3:12295799-12295818 | None:intergenic | 50.0% |
| !! | TGGCTTGATGGACTTGGACT+TGG | + | chr5_3:12295800-12295819 | None:intergenic | 50.0% |
| !! | CGGTGATGGACTTGCAACAT+GGG | - | chr5_3:12295846-12295865 | Msa0799210:CDS | 50.0% |
| CCGCCGAAGAAAATTAGGTC+AGG | + | chr5_3:12295916-12295935 | None:intergenic | 50.0% | |
| TGGAGCCGCCGAAGAAAATT+AGG | + | chr5_3:12295921-12295940 | None:intergenic | 50.0% | |
| TCGGTCGGGCTTATCAGTTA+TGG | + | chr5_3:12295941-12295960 | None:intergenic | 50.0% | |
| TTGAAAAGCCGGTGATCGGT+CGG | + | chr5_3:12295956-12295975 | None:intergenic | 50.0% | |
| CTGCTTGAAAAGCCGGTGAT+CGG | + | chr5_3:12295960-12295979 | None:intergenic | 50.0% | |
| ! | TCAAGCAGAGTGTTTGGCAG+AGG | - | chr5_3:12295972-12295991 | Msa0799210:intron | 50.0% |
| ! | CAAGCAGAGTGTTTGGCAGA+GGG | - | chr5_3:12295973-12295992 | Msa0799210:intron | 50.0% |
| ! | AAGCAGAGTGTTTGGCAGAG+GGG | - | chr5_3:12295974-12295993 | Msa0799210:intron | 50.0% |
| GGGGTTAAAGAAACTTGGGG+TGG | - | chr5_3:12295993-12296012 | Msa0799210:CDS | 50.0% | |
| CTCCAAAGCGGATGATGAGA+TGG | - | chr5_3:12296865-12296884 | Msa0799210:intron | 50.0% | |
| CTCCATCTCATCATCCGCTT+TGG | + | chr5_3:12296870-12296889 | None:intergenic | 50.0% | |
| TAGGTGGTGAAAAAGGGGAG+TGG | - | chr5_3:12296897-12296916 | Msa0799210:intron | 50.0% | |
| GGAGCGAAGTGAGCTATTAG+AGG | - | chr5_3:12297151-12297170 | Msa0799210:intron | 50.0% | |
| AGGTGTGAAGCTTTACACCG+TGG | - | chr5_3:12295717-12295736 | Msa0799210:exon | 50.0% | |
| TACACCGTGGAGATAGAGCA+AGG | - | chr5_3:12295730-12295749 | Msa0799210:exon | 50.0% | |
| !! | GGCTTGATGGACTTGGACTT+GGG | + | chr5_3:12295799-12295818 | None:intergenic | 50.0% |
| !! | TGGCTTGATGGACTTGGACT+TGG | + | chr5_3:12295800-12295819 | None:intergenic | 50.0% |
| !! | CGGTGATGGACTTGCAACAT+GGG | - | chr5_3:12295846-12295865 | Msa0799210:CDS | 50.0% |
| CCGCCGAAGAAAATTAGGTC+AGG | + | chr5_3:12295916-12295935 | None:intergenic | 50.0% | |
| TGGAGCCGCCGAAGAAAATT+AGG | + | chr5_3:12295921-12295940 | None:intergenic | 50.0% | |
| TCGGTCGGGCTTATCAGTTA+TGG | + | chr5_3:12295941-12295960 | None:intergenic | 50.0% | |
| TTGAAAAGCCGGTGATCGGT+CGG | + | chr5_3:12295956-12295975 | None:intergenic | 50.0% | |
| CTGCTTGAAAAGCCGGTGAT+CGG | + | chr5_3:12295960-12295979 | None:intergenic | 50.0% | |
| ! | TCAAGCAGAGTGTTTGGCAG+AGG | - | chr5_3:12295972-12295991 | Msa0799210:intron | 50.0% |
| ! | CAAGCAGAGTGTTTGGCAGA+GGG | - | chr5_3:12295973-12295992 | Msa0799210:intron | 50.0% |
| ! | AAGCAGAGTGTTTGGCAGAG+GGG | - | chr5_3:12295974-12295993 | Msa0799210:intron | 50.0% |
| GGGGTTAAAGAAACTTGGGG+TGG | - | chr5_3:12295993-12296012 | Msa0799210:CDS | 50.0% | |
| CTCCAAAGCGGATGATGAGA+TGG | - | chr5_3:12296865-12296884 | Msa0799210:intron | 50.0% | |
| CTCCATCTCATCATCCGCTT+TGG | + | chr5_3:12296870-12296889 | None:intergenic | 50.0% | |
| TAGGTGGTGAAAAAGGGGAG+TGG | - | chr5_3:12296897-12296916 | Msa0799210:intron | 50.0% | |
| GGAGCGAAGTGAGCTATTAG+AGG | - | chr5_3:12297151-12297170 | Msa0799210:intron | 50.0% | |
| GTCCAAGTCCATCAAGCCAG+TGG | - | chr5_3:12295801-12295820 | Msa0799210:CDS | 55.0% | |
| !! | CACCACTGGCTTGATGGACT+TGG | + | chr5_3:12295806-12295825 | None:intergenic | 55.0% |
| CAAGTCCATCAAGCCAGTGG+TGG | - | chr5_3:12295804-12295823 | Msa0799210:CDS | 55.0% | |
| !! | GAGAACCACCACTGGCTTGA+TGG | + | chr5_3:12295812-12295831 | None:intergenic | 55.0% |
| !! | GCGGTGATGGACTTGCAACA+TGG | - | chr5_3:12295845-12295864 | Msa0799210:CDS | 55.0% |
| TGATAAGCCCGACCGATCAC+CGG | - | chr5_3:12295945-12295964 | Msa0799210:intron | 55.0% | |
| TGAAAAGCCGGTGATCGGTC+GGG | + | chr5_3:12295955-12295974 | None:intergenic | 55.0% | |
| AGTAGGGCAGTGGAAGATGC+AGG | - | chr5_3:12296144-12296163 | Msa0799210:intron | 55.0% | |
| ! | GGCTGGTCATTTGGCTCATC+TGG | - | chr5_3:12297618-12297637 | Msa0799210:CDS | 55.0% |
| GTCCAAGTCCATCAAGCCAG+TGG | - | chr5_3:12295801-12295820 | Msa0799210:CDS | 55.0% | |
| !! | CACCACTGGCTTGATGGACT+TGG | + | chr5_3:12295806-12295825 | None:intergenic | 55.0% |
| CAAGTCCATCAAGCCAGTGG+TGG | - | chr5_3:12295804-12295823 | Msa0799210:CDS | 55.0% | |
| !! | GAGAACCACCACTGGCTTGA+TGG | + | chr5_3:12295812-12295831 | None:intergenic | 55.0% |
| !! | GCGGTGATGGACTTGCAACA+TGG | - | chr5_3:12295845-12295864 | Msa0799210:CDS | 55.0% |
| TGATAAGCCCGACCGATCAC+CGG | - | chr5_3:12295945-12295964 | Msa0799210:intron | 55.0% | |
| TGAAAAGCCGGTGATCGGTC+GGG | + | chr5_3:12295955-12295974 | None:intergenic | 55.0% | |
| AGTAGGGCAGTGGAAGATGC+AGG | - | chr5_3:12296144-12296163 | Msa0799210:intron | 55.0% | |
| ! | GGCTGGTCATTTGGCTCATC+TGG | - | chr5_3:12297618-12297637 | Msa0799210:CDS | 55.0% |
| CCAGTGGTGGTTCTCCTCCA+CGG | - | chr5_3:12295817-12295836 | Msa0799210:CDS | 60.0% | |
| GTTCTCCTCCACGGCTTCTG+CGG | - | chr5_3:12295826-12295845 | Msa0799210:CDS | 60.0% | |
| CCAGTGGTGGTTCTCCTCCA+CGG | - | chr5_3:12295817-12295836 | Msa0799210:CDS | 60.0% | |
| GTTCTCCTCCACGGCTTCTG+CGG | - | chr5_3:12295826-12295845 | Msa0799210:CDS | 60.0% | |
| CCGTGGAGGAGAACCACCAC+TGG | + | chr5_3:12295820-12295839 | None:intergenic | 65.0% | |
| CATCACCGCAGAAGCCGTGG+AGG | + | chr5_3:12295834-12295853 | None:intergenic | 65.0% | |
| CTCCACGGCTTCTGCGGTGA+TGG | - | chr5_3:12295832-12295851 | Msa0799210:CDS | 65.0% | |
| GTCCATCACCGCAGAAGCCG+TGG | + | chr5_3:12295837-12295856 | None:intergenic | 65.0% | |
| CCGTGGAGGAGAACCACCAC+TGG | + | chr5_3:12295820-12295839 | None:intergenic | 65.0% | |
| CATCACCGCAGAAGCCGTGG+AGG | + | chr5_3:12295834-12295853 | None:intergenic | 65.0% | |
| CTCCACGGCTTCTGCGGTGA+TGG | - | chr5_3:12295832-12295851 | Msa0799210:CDS | 65.0% | |
| GTCCATCACCGCAGAAGCCG+TGG | + | chr5_3:12295837-12295856 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 12295590 | 12297854 | 12295590 | ID=Msa0799210;Name=Msa0799210 |
| chr5_3 | mRNA | 12295590 | 12297854 | 12295590 | ID=Msa0799210-mRNA-1;Parent=Msa0799210;Name=Msa0799210-mRNA-1;_AED=0.07;_eAED=0.07;_QI=71|1|1|1|1|1|4|143|305 |
| chr5_3 | exon | 12295590 | 12295865 | 12295590 | ID=Msa0799210-mRNA-1:exon:5089;Parent=Msa0799210-mRNA-1 |
| chr5_3 | exon | 12295978 | 12296045 | 12295978 | ID=Msa0799210-mRNA-1:exon:5088;Parent=Msa0799210-mRNA-1 |
| chr5_3 | exon | 12296224 | 12296313 | 12296224 | ID=Msa0799210-mRNA-1:exon:5087;Parent=Msa0799210-mRNA-1 |
| chr5_3 | exon | 12297157 | 12297854 | 12297157 | ID=Msa0799210-mRNA-1:exon:5086;Parent=Msa0799210-mRNA-1 |
| chr5_3 | five_prime_UTR | 12297784 | 12297854 | 12297784 | ID=Msa0799210-mRNA-1:five_prime_utr;Parent=Msa0799210-mRNA-1 |
| chr5_3 | CDS | 12297157 | 12297783 | 12297157 | ID=Msa0799210-mRNA-1:cds;Parent=Msa0799210-mRNA-1 |
| chr5_3 | CDS | 12296224 | 12296313 | 12296224 | ID=Msa0799210-mRNA-1:cds;Parent=Msa0799210-mRNA-1 |
| chr5_3 | CDS | 12295978 | 12296045 | 12295978 | ID=Msa0799210-mRNA-1:cds;Parent=Msa0799210-mRNA-1 |
| chr5_3 | CDS | 12295733 | 12295865 | 12295733 | ID=Msa0799210-mRNA-1:cds;Parent=Msa0799210-mRNA-1 |
| chr5_3 | three_prime_UTR | 12295590 | 12295732 | 12295590 | ID=Msa0799210-mRNA-1:three_prime_utr;Parent=Msa0799210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
