AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0763190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0763190 MtrunA17_Chr5g0410711 98.130 802 14 1 1 802 1 801 0.0 1641
Msa0763190 MtrunA17_Chr6g0481041 47.476 733 361 13 61 779 1 723 0.0 659
Msa0763190 MtrunA17_Chr2g0322731 44.429 736 360 15 57 781 70 767 0.0 618
Msa0763190 MtrunA17_Chr4g0024351 46.023 704 337 13 89 781 60 731 0.0 612
Msa0763190 MtrunA17_Chr8g0350321 44.027 745 386 16 49 779 79 806 0.0 612
Msa0763190 MtrunA17_Chr7g0246631 44.170 729 368 16 66 779 70 774 0.0 600
Msa0763190 MtrunA17_Chr1g0203671 41.272 739 406 13 57 779 63 789 0.0 570
Msa0763190 MtrunA17_Chr6g0472471 41.813 739 393 16 63 779 42 765 2.20e-176 526
Msa0763190 MtrunA17_Chr2g0331581 38.205 691 379 10 93 779 143 789 2.15e-160 486
Msa0763190 MtrunA17_Chr7g0224451 41.322 484 216 9 89 565 16 438 1.03e-118 365
Msa0763190 MtrunA17_Chr5g0394111 36.542 509 294 12 282 779 156 646 1.34e-99 322
Msa0763190 MtrunA17_Chr5g0394111 45.390 141 72 3 71 211 18 153 3.91e-27 117
Msa0763190 MtrunA17_Chr2g0292731 34.369 515 297 14 282 779 58 548 7.07e-90 293
Msa0763190 MtrunA17_Chr2g0292741 33.528 513 299 15 282 779 50 535 3.12e-84 278
Msa0763190 MtrunA17_Chr7g0224481 40.526 380 164 7 89 462 16 339 5.63e-81 263
Msa0763190 MtrunA17_Chr7g0224491 43.533 317 153 9 465 779 1 293 1.93e-72 239
Msa0763190 MtrunA17_Chr2g0292761 35.885 418 234 14 297 705 92 484 4.14e-69 238
Msa0763190 MtrunA17_Chr5g0419821 50.806 124 59 2 88 210 32 154 5.88e-34 128
Msa0763190 MtrunA17_Chr2g0319671 33.028 218 121 6 341 553 104 301 1.66e-26 110
Msa0763190 MtrunA17_Chr2g0319691 40.157 127 64 3 401 523 1 119 1.81e-20 89.0
Msa0763190 MtrunA17_Chr2g0304191 33.577 137 79 3 295 425 1 131 1.49e-19 85.5
Msa0763190 MtrunA17_Chr2g0319681 27.615 239 155 5 545 779 1 225 1.22e-18 86.3
Msa0763190 MtrunA17_Chr7g0224431 33.129 163 66 3 310 472 1 120 6.81e-18 80.5
Msa0763190 MtrunA17_Chr1g0205981 34.359 195 96 8 144 329 1 172 3.88e-17 80.9
Msa0763190 MtrunA17_Chr2g0319701 28.151 238 153 8 545 779 1 223 2.20e-15 76.6
Msa0763190 MtrunA17_Chr7g0224461 40.000 120 65 3 660 779 2 114 4.41e-14 69.3
Msa0763190 MtrunA17_Chr4g0055851 35.115 131 84 1 48 177 75 205 6.95e-14 73.2
Msa0763190 MtrunA17_Chr4g0028991 34.694 98 56 2 92 181 28 125 1.92e-11 67.8
Msa0763190 MtrunA17_Chr7g0265521 36.937 111 64 2 77 184 51 158 1.92e-11 64.7
Msa0763190 MtrunA17_Chr7g0258831 31.250 128 85 1 64 188 129 256 5.78e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0763190 AT5G46880.3 55.475 831 286 21 8 779 1 806 0.0 842
Msa0763190 AT5G46880.1 55.475 831 286 21 8 779 1 806 0.0 842
Msa0763190 AT5G46880.2 55.475 831 286 21 8 779 1 806 0.0 842
Msa0763190 AT4G17710.1 48.454 776 309 13 13 779 10 703 0.0 662
Msa0763190 AT4G04890.2 44.709 756 381 13 34 779 7 735 0.0 647
Msa0763190 AT4G04890.1 44.709 756 381 13 34 779 7 735 0.0 647
Msa0763190 AT1G05230.8 44.505 737 352 16 51 779 29 716 0.0 625
Msa0763190 AT1G05230.4 44.505 737 352 16 51 779 29 716 0.0 625
Msa0763190 AT1G05230.9 44.505 737 352 16 51 779 29 716 0.0 625
Msa0763190 AT1G05230.10 44.505 737 352 16 51 779 29 716 0.0 625
Msa0763190 AT1G05230.7 44.505 737 352 16 51 779 29 716 0.0 625
Msa0763190 AT1G05230.11 44.505 737 352 16 51 779 29 716 0.0 625
Msa0763190 AT1G05230.2 44.505 737 352 16 51 779 29 716 0.0 625
Msa0763190 AT1G05230.6 44.505 737 352 16 51 779 29 716 0.0 625
Msa0763190 AT1G05230.5 44.505 737 352 16 51 779 29 716 0.0 625
Msa0763190 AT1G05230.1 44.505 737 352 16 51 779 29 716 0.0 625
Msa0763190 AT1G05230.3 44.233 737 352 16 51 779 29 714 0.0 621
Msa0763190 AT4G21750.2 43.586 764 374 15 55 782 19 761 0.0 619
Msa0763190 AT4G21750.1 43.586 764 374 15 55 782 19 761 0.0 619
Msa0763190 AT4G21750.3 43.586 764 374 15 55 782 19 761 0.0 619
Msa0763190 AT4G21750.4 43.586 764 374 15 55 782 19 761 0.0 619
Msa0763190 AT1G73360.1 45.927 712 346 14 89 785 32 719 0.0 597
Msa0763190 AT4G00730.1 42.391 736 373 16 55 779 103 798 0.0 572
Msa0763190 AT1G17920.2 44.398 723 336 17 75 779 7 681 0.0 571
Msa0763190 AT1G17920.1 44.398 723 336 17 75 779 7 681 0.0 571
Msa0763190 AT3G61150.1 40.591 744 390 16 63 779 85 803 0.0 553
Msa0763190 AT1G05230.12 46.141 609 288 13 51 651 29 605 0.0 540
Msa0763190 AT2G32370.1 38.289 713 382 15 75 776 52 717 5.99e-156 472
Msa0763190 AT5G52170.3 39.306 692 341 18 93 779 61 678 2.90e-155 469
Msa0763190 AT5G52170.1 39.306 692 341 18 93 779 61 678 2.90e-155 469
Msa0763190 AT5G52170.2 39.049 694 345 18 93 779 61 683 7.32e-155 468
Msa0763190 AT1G79840.3 38.122 703 362 17 89 779 43 684 3.79e-149 453
Msa0763190 AT1G79840.6 38.122 703 362 17 89 779 43 684 3.79e-149 453
Msa0763190 AT1G79840.1 38.122 703 362 17 89 779 101 742 1.29e-148 454
Msa0763190 AT1G79840.2 38.122 703 362 17 89 779 130 771 1.15e-147 452
Msa0763190 AT3G03260.1 35.358 741 410 19 61 779 1 694 3.83e-135 417
Msa0763190 AT4G00730.2 45.397 478 226 10 55 524 103 553 4.46e-135 413
Msa0763190 AT5G17320.1 34.097 742 423 18 72 779 6 715 7.40e-126 394
Msa0763190 AT1G79840.4 38.448 567 292 13 89 645 101 620 1.44e-122 382
Msa0763190 AT1G34650.1 34.153 732 408 22 84 779 12 705 8.36e-114 362
Msa0763190 AT4G25530.1 31.356 708 416 13 83 779 34 682 9.95e-112 356
Msa0763190 AT3G03260.2 36.684 567 322 14 61 618 1 539 8.06e-109 343
Msa0763190 AT1G79840.5 40.227 440 213 11 89 523 101 495 3.97e-93 301
Msa0763190 AT5G07260.1 25.378 595 349 20 154 736 9 520 2.78e-38 150
Msa0763190 AT5G07260.2 25.210 595 345 21 154 736 9 515 6.07e-38 149
Msa0763190 AT5G60690.1 35.714 98 55 2 92 181 25 122 1.54e-11 68.6
Msa0763190 AT4G26920.1 25.431 232 152 10 297 523 74 289 1.68e-11 67.8

Find 237 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGTTCCTTCCTCTCTTT+TGG 0.174938 5_2:-22067507 Msa0763190:three_prime_UTR
TATTATACGCTTCCATTTCT+TGG 0.178284 5_2:+22072472 None:intergenic
AGAGGACCTCCTGCAGTATT+TGG 0.204163 5_2:+22069056 None:intergenic
TTCAGTCTTTGTTTATCATC+TGG 0.234084 5_2:+22072120 None:intergenic
ATGTATAATGGGACCTGATA+TGG 0.242844 5_2:-22071263 Msa0763190:CDS
AGAGGGTGGTCTCTTATTAA+TGG 0.264546 5_2:-22070049 Msa0763190:CDS
AGAATAGTGACAAGTGAATT+AGG 0.271863 5_2:-22067382 Msa0763190:three_prime_UTR
ATTATAGCTTCAGGTGCTTC+TGG 0.293148 5_2:-22069607 Msa0763190:CDS
CAGATGGATGCACTTTCTAA+TGG 0.294055 5_2:-22068183 Msa0763190:CDS
ATCAAGCTCTTTCGCGCTTC+CGG 0.296499 5_2:+22068593 None:intergenic
CATAGTTACTAAATATTTGA+TGG 0.305082 5_2:+22068859 None:intergenic
GGAACTTGCAGATTCTTCTA+TGG 0.313430 5_2:-22070004 Msa0763190:CDS
TTTAAGTATGTGAGGTGTAT+TGG 0.319201 5_2:-22067207 Msa0763190:three_prime_UTR
CACCACAAGTGGTCATATTA+AGG 0.319412 5_2:+22068537 None:intergenic
CAGTTTCAGAACCTTCTTCA+TGG 0.328797 5_2:-22073160 Msa0763190:five_prime_UTR
ACTGAAACTAAGCCATGATT+TGG 0.329620 5_2:-22072103 Msa0763190:CDS
GCTTGATGAAATTAGCAAAT+AGG 0.352169 5_2:-22068577 Msa0763190:CDS
TTAGTCAGGGTGGTGTGGTT+CGG 0.354809 5_2:-22066989 Msa0763190:three_prime_UTR
CATGAAGAAGGTTCTGAAAC+TGG 0.361754 5_2:+22073161 None:intergenic
TTGTGGTGGGCCATGTATAA+TGG 0.362098 5_2:-22071275 Msa0763190:CDS
CTCAGGTTGTCTTCTTATCA+TGG 0.367340 5_2:-22067737 Msa0763190:CDS
ATCATGGATCAAAGTGGTTC+AGG 0.367987 5_2:-22072597 Msa0763190:CDS
ACAATTCATGTTCCCATAGT+TGG 0.381813 5_2:+22067308 None:intergenic
GGTAATTAACTAGAGTAGTA+AGG 0.382206 5_2:-22067284 Msa0763190:three_prime_UTR
AGAAAACCAAAGGTATTATC+TGG 0.382461 5_2:+22067057 None:intergenic
TAGTCAGGGTGGTGTGGTTC+GGG 0.386874 5_2:-22066988 Msa0763190:three_prime_UTR
CGTACCCTTGAATAGCCATT+TGG 0.390035 5_2:+22069012 None:intergenic
ATACATGGCCCACCACAATT+AGG 0.390584 5_2:+22071280 None:intergenic
TCAGTCTTTGTTTATCATCT+GGG 0.391749 5_2:+22072121 None:intergenic
ACTAACAGCAATTGCTTTGT+TGG 0.392291 5_2:-22067595 Msa0763190:CDS
AGATGGATGCACTTTCTAAT+GGG 0.399022 5_2:-22068182 Msa0763190:CDS
ACTGTTCAAATTATAGCTTC+AGG 0.399428 5_2:-22069616 Msa0763190:CDS
ATCTCTTATGCCACCATCAC+TGG 0.399846 5_2:-22070172 Msa0763190:CDS
CTCTTTCGCGCTTCCGGAGA+AGG 0.400542 5_2:+22068599 None:intergenic
GACAAGAATTGTGAAAGTTT+TGG 0.406893 5_2:+22069079 None:intergenic
GTGATTCTAACCGTGTCTTC+TGG 0.415111 5_2:+22068485 None:intergenic
CTTGCCCTAGCAACAATTGT+TGG 0.420980 5_2:+22069640 None:intergenic
AACCTTCTTCATGGTCCTGC+TGG 0.422157 5_2:-22073151 Msa0763190:intron
AATTATATGCAGTTTGTTCA+AGG 0.423365 5_2:-22072154 Msa0763190:intron
TGAAGTTGAAGTTAGAGTTA+TGG 0.424415 5_2:+22072771 None:intergenic
GACAAGGAGTGCACACTACT+TGG 0.425308 5_2:+22067540 None:intergenic
CTAACAGCAATTGCTTTGTT+GGG 0.426498 5_2:-22067594 Msa0763190:CDS
GATGGCCTCATTAGTTAGTC+AGG 0.426555 5_2:-22067003 Msa0763190:three_prime_UTR
TATTGCTAACGGTTCACATC+CGG 0.428988 5_2:-22068136 Msa0763190:CDS
CAAATTGAAGGTGCTCTTTG+TGG 0.429451 5_2:-22067622 Msa0763190:CDS
GTCAAATGAACGGACCGCTT+TGG 0.431441 5_2:-22069963 Msa0763190:CDS
TTACTAAATATTTGATGGAC+AGG 0.433796 5_2:+22068864 None:intergenic
TTTGAACAGAAAGAAGAAGA+AGG 0.433841 5_2:-22072642 Msa0763190:intron
ATGGAGGTGGTGCCATTGTT+TGG 0.434190 5_2:+22070193 None:intergenic
GAGAGTTGCACAGATCAATC+TGG 0.435548 5_2:-22067952 Msa0763190:CDS
TTTGGTGCACAACGTTGGTT+AGG 0.436385 5_2:-22068819 Msa0763190:CDS
GAGGACCTCCTGCAGTATTT+GGG 0.437354 5_2:+22069057 None:intergenic
AGCGCACCAGATAATACCTT+TGG 0.438255 5_2:-22067063 Msa0763190:three_prime_UTR
AGAAGGGAAATGCAGTTTCC+CGG 0.438847 5_2:+22068117 None:intergenic
AAGACTTTGGTATGAGGATA+AGG 0.441439 5_2:+22068392 None:intergenic
AGAGATTAATAATGAACAAC+AGG 0.441688 5_2:-22072538 Msa0763190:CDS
AACTTACATTTATGCGAAGA+AGG 0.441914 5_2:+22068100 None:intergenic
ATCTCTGTGCATGGTGGCAT+TGG 0.442787 5_2:+22070114 None:intergenic
TGATCATCAAAGCCCATATC+AGG 0.443548 5_2:+22071250 None:intergenic
TGCTCGTCAGATCCAAGAAA+TGG 0.444102 5_2:-22072484 Msa0763190:CDS
GATTGCAGTGATACCTTCTC+CGG 0.445102 5_2:-22068612 Msa0763190:intron
TTTAGTAACTATGTGTATAG+TGG 0.445206 5_2:-22068849 Msa0763190:CDS
GAAGAAGGAAAAGGTTGAAA+AGG 0.449348 5_2:+22072737 None:intergenic
GTTTGAAGAATGAGAACTAT+AGG 0.449425 5_2:-22071333 Msa0763190:CDS
ACTATGGGAACATGAATTGT+AGG 0.449987 5_2:-22067305 Msa0763190:three_prime_UTR
TTCGTAGCGGTGAGAATGAT+AGG 0.451667 5_2:-22069939 Msa0763190:CDS
GCTAGAAACATATCAGATCT+TGG 0.453635 5_2:-22068756 Msa0763190:CDS
TTCCTTTGCTTAAGATTCAA+AGG 0.462942 5_2:+22069874 None:intergenic
TGTGGTGGGCCATGTATAAT+GGG 0.465808 5_2:-22071274 Msa0763190:CDS
CTGAAACTAAGCCATGATTT+GGG 0.466763 5_2:-22072102 Msa0763190:CDS
GAACAAGTTGAAGATAAGTC+AGG 0.474547 5_2:-22072570 Msa0763190:CDS
AACCACGCCAGGTTAAGTTC+TGG 0.478239 5_2:-22072074 Msa0763190:CDS
ATCACTCCACTAGGTTGGCC+AGG 0.478596 5_2:+22068443 None:intergenic
TCTTGAAAATGTGATGGTTC+AGG 0.479375 5_2:+22070069 None:intergenic
GTGGTTTCAGTCCCAAATCA+TGG 0.480470 5_2:+22072091 None:intergenic
AAATACTGCAGGAGGTCCTC+TGG 0.481145 5_2:-22069054 Msa0763190:CDS
GTTTCCAACAATTGTTGCTA+GGG 0.484748 5_2:-22069644 Msa0763190:CDS
GAGAGGTAAAGAAGAGATCA+TGG 0.485278 5_2:-22072613 Msa0763190:CDS
GACAGTGTGATGAAATGAAA+GGG 0.486482 5_2:+22073254 None:intergenic
AATGGCCCAGGTTCCTTCCT+CGG 0.487016 5_2:+22069128 None:intergenic
GAGCACCTTCAATTTGATGC+AGG 0.487171 5_2:+22067629 None:intergenic
TATTATGTATGCAGGTAACA+TGG 0.487587 5_2:-22068914 Msa0763190:intron
TGTATAATGGGACCTGATAT+GGG 0.487914 5_2:-22071262 Msa0763190:CDS
CATCACACTGTCTCTTTGTG+TGG 0.489404 5_2:-22073243 Msa0763190:five_prime_UTR
TGTTTCCAACAATTGTTGCT+AGG 0.491835 5_2:-22069645 Msa0763190:CDS
GTAATTAACTAGAGTAGTAA+GGG 0.494190 5_2:-22067283 Msa0763190:three_prime_UTR
ACATGCCAAATGGCTATTCA+AGG 0.495938 5_2:-22069017 Msa0763190:CDS
AGATGAGAAATCACTTGCTA+TGG 0.496183 5_2:-22070025 Msa0763190:CDS
GAAAATAATTAAATTAGCAA+TGG 0.496335 5_2:+22067330 None:intergenic
CTTTGTTTATCATCTGGGTG+TGG 0.497200 5_2:+22072126 None:intergenic
TTGGAGGGTGCACTAGTGGT+TGG 0.501171 5_2:+22067559 None:intergenic
AATACCCTGCATCAAATTGA+AGG 0.504038 5_2:-22067634 Msa0763190:CDS
TATGTATGTGAGGAGGGTAG+AGG 0.505862 5_2:-22067102 Msa0763190:three_prime_UTR
TCGCCGCAGTTTCAACCACT+TGG 0.506037 5_2:-22068418 Msa0763190:CDS
GTGTATAGTGGAATGGCATT+TGG 0.507399 5_2:-22068837 Msa0763190:CDS
ATTCCAAGTTCTTTCTCCGT+TGG 0.508575 5_2:-22069196 Msa0763190:CDS
CTTGTCCACTCATAGCTAGT+TGG 0.512114 5_2:+22067890 None:intergenic
TGGTGCGCTCTTGACTCCCT+CGG 0.512377 5_2:+22067077 None:intergenic
GAGTAGTAAGGGAAGGAACA+AGG 0.514870 5_2:-22067272 Msa0763190:three_prime_UTR
TCTCGTATGATTCGTGATGA+TGG 0.519461 5_2:-22067021 Msa0763190:three_prime_UTR
GGTGCTTCTGGCCATGCAAG+TGG 0.520606 5_2:-22069595 Msa0763190:CDS
ATTGCTAACGGTTCACATCC+GGG 0.521364 5_2:-22068135 Msa0763190:CDS
TGTCAAGTAATGTCAACAAT+GGG 0.522321 5_2:-22072839 Msa0763190:CDS
CCACTTGTGGTGGACAATCA+TGG 0.523426 5_2:-22068526 Msa0763190:CDS
TGACGAACGCCACAGATCTC+AGG 0.526206 5_2:-22068357 Msa0763190:intron
TGGTAATTAACATTGTGAAA+TGG 0.527711 5_2:-22067129 Msa0763190:three_prime_UTR
ATACCAACGGAGAAAGAACT+TGG 0.527798 5_2:+22069193 None:intergenic
GAAGGAACAATTTCAATGAC+TGG 0.529168 5_2:+22067518 None:intergenic
ACAACCTGAGTTAGCAGCAT+TGG 0.530947 5_2:+22067750 None:intergenic
AGATCAAAGACTTTGGTATG+AGG 0.531120 5_2:+22068386 None:intergenic
TGCAAGTGGGACTCTTCAGC+TGG 0.531576 5_2:-22069581 Msa0763190:intron
GGTATTTATGTATGTGAGGA+GGG 0.532602 5_2:-22067108 Msa0763190:three_prime_UTR
GATGGTTCAGGTGGTAACAT+AGG 0.532769 5_2:+22070081 None:intergenic
TCAGGTTGTCTTCTTATCAT+GGG 0.533492 5_2:-22067736 Msa0763190:CDS
TGAGGAGGGTAGAGGGACCG+AGG 0.534032 5_2:-22067094 Msa0763190:three_prime_UTR
ACTAGGAAAATCACTGAGCC+TGG 0.535391 5_2:-22068461 Msa0763190:CDS
AAAATGCCGAGGAAGGAACC+TGG 0.537052 5_2:-22069134 Msa0763190:CDS
CTACTTGGAGGGTGCACTAG+TGG 0.538012 5_2:+22067555 None:intergenic
AGGAAAATCAACAATGGCCC+AGG 0.539512 5_2:+22069116 None:intergenic
GGCCTTTGAATCTTAAGCAA+AGG 0.541375 5_2:-22069876 Msa0763190:CDS
TCAGGTGGTAACATAGGGAC+AGG 0.544013 5_2:+22070087 None:intergenic
TGAGAACTATAGGCTACAAT+CGG 0.544698 5_2:-22071323 Msa0763190:CDS
TCATCTGAACAAGGTGTCAC+AGG 0.545128 5_2:-22067796 Msa0763190:CDS
AACTTCGATTTGAAAATGCC+CGG 0.545308 5_2:-22071225 Msa0763190:CDS
AGCCTTAATATGACCACTTG+TGG 0.546867 5_2:-22068539 Msa0763190:CDS
AAGGAGTGCACACTACTTGG+AGG 0.551266 5_2:+22067543 None:intergenic
ACTTACATTTATGCGAAGAA+GGG 0.551867 5_2:+22068101 None:intergenic
TGGGAACTCATTAAATGAAG+TGG 0.552199 5_2:-22068163 Msa0763190:CDS
ATGGTTCAGGTGGTAACATA+GGG 0.552742 5_2:+22070082 None:intergenic
TTTGGGACTGAAACCACGCC+AGG 0.553427 5_2:-22072085 Msa0763190:CDS
TAACTATGTGTATAGTGGAA+TGG 0.553607 5_2:-22068844 Msa0763190:CDS
CCATAATCCAAAAGAGAGGA+AGG 0.554624 5_2:+22067500 None:intergenic
ATTACCATGGAAGAAGGAAA+AGG 0.555298 5_2:+22072728 None:intergenic
GAAGAAGAAGGAATATTGAG+AGG 0.555846 5_2:-22072630 Msa0763190:CDS
TTGAAGTTAGAGTTATGGAT+CGG 0.556544 5_2:+22072776 None:intergenic
TTTGCAGAGGCAATGTGAAA+GGG 0.557444 5_2:-22068793 Msa0763190:CDS
TCAGCATTTGACGAAACCAT+TGG 0.559635 5_2:+22067823 None:intergenic
TACCAGCAGGACCATGAAGA+AGG 0.560522 5_2:+22073149 None:intergenic
TGCATTGCACTCCTTCCACA+AGG 0.560994 5_2:-22067859 Msa0763190:CDS
AGCACCTTCAATTTGATGCA+GGG 0.561062 5_2:+22067630 None:intergenic
ATTAGTTAGTCAGGGTGGTG+TGG 0.561524 5_2:-22066994 Msa0763190:three_prime_UTR
ACGGAGGAGATCAAAGACTT+TGG 0.563966 5_2:+22068379 None:intergenic
AGGGTTCATGATAGTGCCAA+TGG 0.566530 5_2:-22067839 Msa0763190:CDS
CGAGAATCACTCCACTAGGT+TGG 0.566912 5_2:+22068438 None:intergenic
AGAGTTGCACAGATCAATCT+GGG 0.567485 5_2:-22067951 Msa0763190:CDS
TATGGTTAGAGAAATTCGTA+TGG 0.567633 5_2:-22067468 Msa0763190:three_prime_UTR
GTGCTTCTGGCCATGCAAGT+GGG 0.568255 5_2:-22069594 Msa0763190:CDS
GGCATTGGATCAAAGTGCCT+CGG 0.568835 5_2:+22070129 None:intergenic
AGTGATGGTGGCATAAGAGA+TGG 0.569604 5_2:+22070174 None:intergenic
AGACAGTGTGATGAAATGAA+AGG 0.570581 5_2:+22073253 None:intergenic
GAAAGGTTAAGCTTTGCAGA+AGG 0.572294 5_2:+22067688 None:intergenic
CAAGTAATGTCAACAATGGG+AGG 0.574313 5_2:-22072836 Msa0763190:CDS
AGTGCCAATGCTGCTAACTC+AGG 0.574318 5_2:-22067754 Msa0763190:CDS
AAGAAAATGAGTCTCTCTAG+TGG 0.575091 5_2:+22069170 None:intergenic
ATTCTTGTCCCAAATACTGC+AGG 0.578963 5_2:-22069065 Msa0763190:CDS
AACCAGAACTTAACCTGGCG+TGG 0.579376 5_2:+22072072 None:intergenic
GAGATCTGTGGCGTTCGTCA+CGG 0.582192 5_2:+22068360 None:intergenic
GAAGTGGCTCATATTGCTAA+CGG 0.583975 5_2:-22068147 Msa0763190:CDS
GAGGAGGGTAGAGGGACCGA+GGG 0.584418 5_2:-22067093 Msa0763190:three_prime_UTR
GCTGAAGAGTCCCACTTGCA+TGG 0.585312 5_2:+22069584 None:intergenic
GAATCGTCGAACTCAGATGA+AGG 0.585722 5_2:-22072046 Msa0763190:intron
TTGTCAAGTAATGTCAACAA+TGG 0.587069 5_2:-22072840 Msa0763190:CDS
CTATCATGAACCCTTGTGGA+AGG 0.589244 5_2:+22067848 None:intergenic
ATATCAGGTCCCATTATACA+TGG 0.589693 5_2:+22071265 None:intergenic
CCATGATTGTCCACCACAAG+TGG 0.590603 5_2:+22068526 None:intergenic
TGGTATTTATGTATGTGAGG+AGG 0.591360 5_2:-22067109 Msa0763190:three_prime_UTR
TGTCAGCAAAATGCCGAGGA+AGG 0.592338 5_2:-22069141 Msa0763190:CDS
TGAAAGGGTTGCAAGCCTCA+TGG 0.593187 5_2:-22068778 Msa0763190:CDS
ATGTATGTGAGGAGGGTAGA+GGG 0.593585 5_2:-22067101 Msa0763190:three_prime_UTR
GGTGGTGCCATTGTTTGGAG+TGG 0.593710 5_2:+22070198 None:intergenic
ATTATGTATGCAGGTAACAT+GGG 0.594985 5_2:-22068913 Msa0763190:intron
AGTAGTAAGGGAAGGAACAA+GGG 0.595894 5_2:-22067271 Msa0763190:three_prime_UTR
AAATGCCGAGGAAGGAACCT+GGG 0.596467 5_2:-22069133 Msa0763190:CDS
AGGAAAAGGTTGAAAAGGCA+TGG 0.599322 5_2:+22072742 None:intergenic
ATGTCTAAGTCCAGTGATGG+TGG 0.600221 5_2:+22070162 None:intergenic
AAATGCCCGGTTAAAAGAAG+AGG 0.603680 5_2:-22071212 Msa0763190:intron
ACTGAGCCTGGCCAACCTAG+TGG 0.604985 5_2:-22068449 Msa0763190:CDS
ATTGAAGGTGCTCTTTGTGG+CGG 0.608550 5_2:-22067619 Msa0763190:CDS
TTGGCACTAGTAGTAGATGA+TGG 0.610277 5_2:+22067769 None:intergenic
TTTGATGCAGGGTATTGCAA+AGG 0.610933 5_2:+22067641 None:intergenic
TGATTGCTGTGACACTTGAA+AGG 0.612049 5_2:+22067671 None:intergenic
CTTAATATGACCACTTGTGG+TGG 0.613209 5_2:-22068536 Msa0763190:CDS
GGAAGGAGTGCAATGCATGA+AGG 0.614210 5_2:+22067865 None:intergenic
GCCTCATTAGTTAGTCAGGG+TGG 0.614874 5_2:-22066999 Msa0763190:three_prime_UTR
ACAGGAATCATCTCTGTGCA+TGG 0.615041 5_2:+22070105 None:intergenic
AAGTAATGTCAACAATGGGA+GGG 0.615730 5_2:-22072835 Msa0763190:CDS
CCACCCTCTTGAAAATGTGA+TGG 0.615906 5_2:+22070063 None:intergenic
TCGTAGCGGTGAGAATGATA+GGG 0.616366 5_2:-22069938 Msa0763190:CDS
TTTGTATGGGAGTTAGAGTG+TGG 0.616512 5_2:-22067149 Msa0763190:three_prime_UTR
TGGCATTTGGTGCACAACGT+TGG 0.617325 5_2:-22068824 Msa0763190:CDS
GAAGGAGTGCAATGCATGAA+GGG 0.618962 5_2:+22067866 None:intergenic
GGCACTATCATGAACCCTTG+TGG 0.620159 5_2:+22067844 None:intergenic
AGGAGTGCACACTACTTGGA+GGG 0.620960 5_2:+22067544 None:intergenic
CATGCCAAATGGCTATTCAA+GGG 0.621111 5_2:-22069016 Msa0763190:intron
ATCAGATTCACCAGAAGACA+CGG 0.622322 5_2:-22068495 Msa0763190:CDS
GTGATTCAAGACATGCCAAA+TGG 0.623871 5_2:-22069027 Msa0763190:CDS
TTAAGCAAAGGAATGAGTTG+AGG 0.624294 5_2:-22069864 Msa0763190:CDS
GTTAAGATGTGTCAAATGAA+CGG 0.624392 5_2:-22069973 Msa0763190:CDS
TGGAAAAGTTGAATTAGCAA+CGG 0.627770 5_2:-22067448 Msa0763190:three_prime_UTR
GCGGCGAGAATCACTCCACT+AGG 0.627933 5_2:+22068434 None:intergenic
ACCACCCTGACTAACTAATG+AGG 0.628387 5_2:+22066998 None:intergenic
CGACCTTACTAGAAAACCAA+AGG 0.628582 5_2:+22067047 None:intergenic
TCTGAAACCAGAACTTAACC+TGG 0.629926 5_2:+22072067 None:intergenic
TGGTCGTCCACTCCAAACAA+TGG 0.632170 5_2:-22070205 Msa0763190:CDS
ACAATTTCAATGACTGGACA+AGG 0.633641 5_2:+22067524 None:intergenic
CTTGTCCCAAATACTGCAGG+AGG 0.633782 5_2:-22069062 Msa0763190:CDS
TGTATAACATCAAGATACAC+TGG 0.638243 5_2:-22070225 Msa0763190:CDS
CTGATATGTTTCTAGCCATG+AGG 0.641439 5_2:+22068763 None:intergenic
AGAAACATATCAGATCTTGG+AGG 0.641979 5_2:-22068753 Msa0763190:intron
GCGGGGAATTTAAGTATGTG+AGG 0.645716 5_2:-22067215 Msa0763190:three_prime_UTR
TCGATCCAACTAGCTATGAG+TGG 0.646383 5_2:-22067895 Msa0763190:CDS
TTAACTAGAGTAGTAAGGGA+AGG 0.648162 5_2:-22067279 Msa0763190:three_prime_UTR
ACACGGTTAGAATCACAACT+AGG 0.649395 5_2:-22068478 Msa0763190:CDS
AAATCCATAATCCAAAAGAG+AGG 0.652616 5_2:+22067496 None:intergenic
ATGGCCTCATTAGTTAGTCA+GGG 0.654609 5_2:-22067002 Msa0763190:three_prime_UTR
AAGCCAAGTGGTTGAAACTG+CGG 0.657898 5_2:+22068415 None:intergenic
ATCAACAGGAAAATCAACAA+TGG 0.660991 5_2:+22069110 None:intergenic
TAGACATGAACATTTATCCG+AGG 0.669126 5_2:-22070146 Msa0763190:CDS
GTCTCTCTAGTGGATACCAA+CGG 0.670714 5_2:+22069180 None:intergenic
GCTGATACATCATCTGAACA+AGG 0.673597 5_2:-22067805 Msa0763190:CDS
ATCTGTGGCGTTCGTCACGG+AGG 0.674761 5_2:+22068363 None:intergenic
GAAGAGATCATGGATCAAAG+TGG 0.674817 5_2:-22072603 Msa0763190:CDS
GTCTTGAATCACACAACCAG+AGG 0.677458 5_2:+22069038 None:intergenic
TTCATGTCTAAGTCCAGTGA+TGG 0.677862 5_2:+22070159 None:intergenic
TGAAAATGTGATGGTTCAGG+TGG 0.678546 5_2:+22070072 None:intergenic
AAATGGTATTTATGTATGTG+AGG 0.679346 5_2:-22067112 Msa0763190:three_prime_UTR
GCATTGCACTCCTTCCACAA+GGG 0.688814 5_2:-22067858 Msa0763190:CDS
ACAGTGTGATGAAATGAAAG+GGG 0.689420 5_2:+22073255 None:intergenic
GGAATCATCTCTGTGCATGG+TGG 0.703887 5_2:+22070108 None:intergenic
GATGGTGGCATAAGAGATGG+AGG 0.705985 5_2:+22070177 None:intergenic
GGACCGCTTTGGATTCGTAG+CGG 0.720865 5_2:-22069952 Msa0763190:CDS
GTATTGTCAGCAAAATGCCG+AGG 0.721851 5_2:-22069145 Msa0763190:CDS
GAGCTTAGTAGTCTACACTA+CGG 0.723315 5_2:-22067929 Msa0763190:CDS
GGTGGCATAAGAGATGGAGG+TGG 0.740361 5_2:+22070180 None:intergenic
AGAATGGTACCTGAGATCTG+TGG 0.741646 5_2:+22068348 None:intergenic
ATGAGGATAAGGAAGCCAAG+TGG 0.750424 5_2:+22068403 None:intergenic
TCACCGCTACGAATCCAAAG+CGG 0.768262 5_2:+22069949 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAAAAAAAAATAGTTT+AGG + chr5_2:22067129-22067148 None:intergenic 10.0%
!!! TAATTTTTCATATAATATCA+TGG + chr5_2:22067905-22067924 None:intergenic 10.0%
!! AAAACCATTAAAAATAATTT+GGG - chr5_2:22068680-22068699 Msa0763190:intron 10.0%
!!! TTTTAATTGTTTACTAATTT+TGG - chr5_2:22068811-22068830 Msa0763190:CDS 10.0%
!!! TTTAATTGTTTACTAATTTT+GGG - chr5_2:22068812-22068831 Msa0763190:CDS 10.0%
!!! TATATTGTTGTTATTATTAT+AGG - chr5_2:22068836-22068855 Msa0763190:CDS 10.0%
!!! ATTTTAATTAAAAATCATGT+TGG - chr5_2:22069109-22069128 Msa0763190:CDS 10.0%
!! AAAATGTATAAAATAATAAG+TGG - chr5_2:22069380-22069399 Msa0763190:intron 10.0%
!!! TTATATTTGACATTTTATTT+TGG - chr5_2:22071606-22071625 Msa0763190:intron 10.0%
!! TAAAATAAAATCAAGAATTT+AGG + chr5_2:22072032-22072051 None:intergenic 10.0%
!!! ATTTTATTTTATTTTACAGA+TGG - chr5_2:22072041-22072060 Msa0763190:intron 10.0%
!!! ATTTTTTTTTCTTTTCACTT+TGG - chr5_2:22067134-22067153 Msa0763190:three_prime_UTR 15.0%
!!! AGAATGTTTTTTTTATTGTT+AGG - chr5_2:22067249-22067268 Msa0763190:three_prime_UTR 15.0%
!! AAATAGTAAAAATATTACCA+TGG + chr5_2:22067528-22067547 None:intergenic 15.0%
!! AAAAATTATTACCTAACATA+TGG - chr5_2:22067917-22067936 Msa0763190:CDS 15.0%
!!! TAAACCCTAAATATATTTTA+AGG - chr5_2:22068025-22068044 Msa0763190:intron 15.0%
!!! TTAGCCTTAAAATATATTTA+GGG + chr5_2:22068032-22068051 None:intergenic 15.0%
!!! TTTAGCCTTAAAATATATTT+AGG + chr5_2:22068033-22068052 None:intergenic 15.0%
!!! TTTTCATTTCATATAGTTAA+TGG - chr5_2:22068507-22068526 Msa0763190:CDS 15.0%
!! CAAAACCATTAAAAATAATT+TGG - chr5_2:22068679-22068698 Msa0763190:intron 15.0%
!! AAACCATTAAAAATAATTTG+GGG - chr5_2:22068681-22068700 Msa0763190:intron 15.0%
!!! TTCTAAGAATAAATAGTTAA+TGG + chr5_2:22068715-22068734 None:intergenic 15.0%
!! AAAAAATAGTATATGTTAAG+TGG - chr5_2:22069274-22069293 Msa0763190:intron 15.0%
!!! TCAATTGTATATTTTTAACA+AGG - chr5_2:22069325-22069344 Msa0763190:intron 15.0%
!! ACAAACTAATAATTCTTAAA+AGG + chr5_2:22069574-22069593 None:intergenic 15.0%
!!! CACTTTTTTAACTTTTTTTT+TGG - chr5_2:22069656-22069675 Msa0763190:CDS 15.0%
!! AAAATGCATATGATTTAATT+TGG - chr5_2:22069957-22069976 Msa0763190:CDS 15.0%
!!! TAATTTTTTATTATGTATGC+AGG - chr5_2:22071318-22071337 Msa0763190:CDS 15.0%
!!! AATTATTTTAAAGCATAGAT+CGG - chr5_2:22071568-22071587 Msa0763190:intron 15.0%
!! GAAAATAATTAAATTAGCAA+TGG + chr5_2:22072913-22072932 None:intergenic 15.0%
!!! ATTTAATTATTTTCCAACTA+TGG - chr5_2:22072919-22072938 Msa0763190:five_prime_UTR 15.0%
!!! TTTAATTATTTTCCAACTAT+GGG - chr5_2:22072920-22072939 Msa0763190:five_prime_UTR 15.0%
!!! TATTTTTTGATGTTAACATC+AGG - chr5_2:22067292-22067311 Msa0763190:three_prime_UTR 20.0%
!! TTCATATAGTTAATGGTTAT+TGG - chr5_2:22068514-22068533 Msa0763190:CDS 20.0%
!! TATTATTGTTTAGTACTCTA+CGG - chr5_2:22068743-22068762 Msa0763190:intron 20.0%
!!! AATATTTTATGTCCTAATTG+TGG - chr5_2:22068948-22068967 Msa0763190:intron 20.0%
!! TTAAAGTGAAGAATTTACAT+AGG + chr5_2:22069186-22069205 None:intergenic 20.0%
!!! AATTCTTCACTTTAAGAATA+TGG - chr5_2:22069191-22069210 Msa0763190:CDS 20.0%
!!! AAGTCATATTTTTTGACAAT+AGG - chr5_2:22069413-22069432 Msa0763190:intron 20.0%
!! ACAAATTCATTTAATCTTTG+TGG - chr5_2:22069747-22069766 Msa0763190:intron 20.0%
!! TTCTTATACTATTAGAGATT+AGG + chr5_2:22069936-22069955 None:intergenic 20.0%
!! CAAAATTCATAAGAAACAAA+TGG + chr5_2:22070533-22070552 None:intergenic 20.0%
!! AAATATAAAACACATCACAA+AGG + chr5_2:22070947-22070966 None:intergenic 20.0%
!! GAATTATTCTTCAAAACATT+AGG - chr5_2:22071291-22071310 Msa0763190:CDS 20.0%
!! CATAGTTACTAAATATTTGA+TGG + chr5_2:22071384-22071403 None:intergenic 20.0%
!!! ATTATTTTAAAGCATAGATC+GGG - chr5_2:22071569-22071588 Msa0763190:intron 20.0%
!!! GAGTGTTTTTAAATAAAAGA+TGG - chr5_2:22072995-22073014 Msa0763190:intron 20.0%
! AAAAATATTACCATGGAAGA+AGG + chr5_2:22067521-22067540 None:intergenic 25.0%
! AGAGATTAATAATGAACAAC+AGG - chr5_2:22067702-22067721 Msa0763190:CDS 25.0%
!!! ATAACCAAGGTTTTAAATTG+CGG - chr5_2:22067862-22067881 Msa0763190:CDS 25.0%
!! AATTATATGCAGTTTGTTCA+AGG - chr5_2:22068086-22068105 Msa0763190:intron 25.0%
! AAGAAGAATAAACGTCTTAA+TGG + chr5_2:22068269-22068288 None:intergenic 25.0%
! AACAAACATCTATTACTACT+AGG - chr5_2:22068458-22068477 Msa0763190:CDS 25.0%
! TGCTATATATCATCATTACT+AGG - chr5_2:22068628-22068647 Msa0763190:intron 25.0%
! GCTATATATCATCATTACTA+GGG - chr5_2:22068629-22068648 Msa0763190:intron 25.0%
!!! GTACCCCAAATTATTTTTAA+TGG + chr5_2:22068687-22068706 None:intergenic 25.0%
!! TAAATACCTCTTCTTTTAAC+CGG + chr5_2:22069037-22069056 None:intergenic 25.0%
! ATCTATCTAGTTAGTAATCA+GGG - chr5_2:22069502-22069521 Msa0763190:intron 25.0%
! AAATCAACAAGTAATCAACA+AGG + chr5_2:22069788-22069807 None:intergenic 25.0%
!! TCAAATAAATTGATTAGCCA+CGG - chr5_2:22069894-22069913 Msa0763190:CDS 25.0%
! ATGTATACCAATGATAAGAT+AGG - chr5_2:22070784-22070803 Msa0763190:intron 25.0%
! GTAAACACCAATATATAACT+AGG + chr5_2:22070870-22070889 None:intergenic 25.0%
!! TTACTAAATATTTGATGGAC+AGG + chr5_2:22071379-22071398 None:intergenic 25.0%
! TTTAGTAACTATGTGTATAG+TGG - chr5_2:22071391-22071410 Msa0763190:intron 25.0%
!!! GGATTATGGATTTTTAGTTA+TGG - chr5_2:22072754-22072773 Msa0763190:CDS 25.0%
! GTAATTAACTAGAGTAGTAA+GGG - chr5_2:22072957-22072976 Msa0763190:intron 25.0%
!!! AATAAAAGATGGATTTTGAG+CGG - chr5_2:22073006-22073025 Msa0763190:intron 25.0%
!! TAATTGTTGTGTGTTTTGTA+TGG - chr5_2:22073077-22073096 Msa0763190:intron 25.0%
!! AATTGTTGTGTGTTTTGTAT+GGG - chr5_2:22073078-22073097 Msa0763190:intron 25.0%
! TGGTAATTAACATTGTGAAA+TGG - chr5_2:22073111-22073130 Msa0763190:intron 25.0%
! AAATGGTATTTATGTATGTG+AGG - chr5_2:22073128-22073147 Msa0763190:intron 25.0%
!!! GGTTTTGAAAATGAAGTGAA+AGG + chr5_2:22067061-22067080 None:intergenic 30.0%
TATTGTTAGGATTCTGATAC+AGG - chr5_2:22067262-22067281 Msa0763190:three_prime_UTR 30.0%
TTTGATGTTAACATCAGGTT+TGG - chr5_2:22067297-22067316 Msa0763190:three_prime_UTR 30.0%
GTGTGGTTAAGAAAAATGTA+TGG - chr5_2:22067374-22067393 Msa0763190:three_prime_UTR 30.0%
TTGTCAAGTAATGTCAACAA+TGG - chr5_2:22067400-22067419 Msa0763190:three_prime_UTR 30.0%
TGTCAAGTAATGTCAACAAT+GGG - chr5_2:22067401-22067420 Msa0763190:three_prime_UTR 30.0%
TTGAAGTTAGAGTTATGGAT+CGG + chr5_2:22067467-22067486 None:intergenic 30.0%
TGAAGTTGAAGTTAGAGTTA+TGG + chr5_2:22067472-22067491 None:intergenic 30.0%
TTTGAACAGAAAGAAGAAGA+AGG - chr5_2:22067598-22067617 Msa0763190:CDS 30.0%
TATTATACGCTTCCATTTCT+TGG + chr5_2:22067771-22067790 None:intergenic 30.0%
AATTCATACAGTGATAACCA+AGG - chr5_2:22067849-22067868 Msa0763190:CDS 30.0%
! ACGAAACCATATTTAAAGCA+AGG + chr5_2:22067947-22067966 None:intergenic 30.0%
! TCAGTCTTTGTTTATCATCT+GGG + chr5_2:22068122-22068141 None:intergenic 30.0%
! TTCAGTCTTTGTTTATCATC+TGG + chr5_2:22068123-22068142 None:intergenic 30.0%
!!! AGAAAACGCGTTTTTTCATT+GGG + chr5_2:22068413-22068432 None:intergenic 30.0%
!!! AAGAAAACGCGTTTTTTCAT+TGG + chr5_2:22068414-22068433 None:intergenic 30.0%
! TGAAAAAACGCGTTTTCTTT+TGG - chr5_2:22068415-22068434 Msa0763190:CDS 30.0%
GGTTAAATGCGTTACATTAA+TGG + chr5_2:22068567-22068586 None:intergenic 30.0%
CAATAAATATGAGTAGCGTT+TGG + chr5_2:22068610-22068629 None:intergenic 30.0%
CTCTACGGTTGATTAATTAT+TGG - chr5_2:22068758-22068777 Msa0763190:CDS 30.0%
GTTTGAAGAATGAGAACTAT+AGG - chr5_2:22068907-22068926 Msa0763190:intron 30.0%
! ATTTTATGTCCTAATTGTGG+TGG - chr5_2:22068951-22068970 Msa0763190:intron 30.0%
! TTTTATGTCCTAATTGTGGT+GGG - chr5_2:22068952-22068971 Msa0763190:intron 30.0%
! AAATACCTCTTCTTTTAACC+GGG + chr5_2:22069036-22069055 None:intergenic 30.0%
! TAGATGAATTTTCACATAGC+TGG + chr5_2:22069487-22069506 None:intergenic 30.0%
CATCTATCTAGTTAGTAATC+AGG - chr5_2:22069501-22069520 Msa0763190:intron 30.0%
TCTATCTAGTTAGTAATCAG+GGG - chr5_2:22069503-22069522 Msa0763190:intron 30.0%
AGTGACAGTCTATAAATTGA+AGG - chr5_2:22069815-22069834 Msa0763190:CDS 30.0%
GTGACAGTCTATAAATTGAA+GGG - chr5_2:22069816-22069835 Msa0763190:CDS 30.0%
! CAAATAAATTGATTAGCCAC+GGG - chr5_2:22069895-22069914 Msa0763190:CDS 30.0%
TACTATTAGAGATTAGGTCA+TGG + chr5_2:22069930-22069949 None:intergenic 30.0%
TGTATAACATCAAGATACAC+TGG - chr5_2:22070015-22070034 Msa0763190:CDS 30.0%
GTTAAGATGTGTCAAATGAA+CGG - chr5_2:22070267-22070286 Msa0763190:intron 30.0%
!! TTAATTTTGATGAGCATGCT+AGG - chr5_2:22070331-22070350 Msa0763190:intron 30.0%
!! TAATTTTGATGAGCATGCTA+GGG - chr5_2:22070332-22070351 Msa0763190:intron 30.0%
TTCCTTTGCTTAAGATTCAA+AGG + chr5_2:22070369-22070388 None:intergenic 30.0%
TCTTTACCTTGTAGCAAAAA+TGG - chr5_2:22070565-22070584 Msa0763190:intron 30.0%
ACTGTTCAAATTATAGCTTC+AGG - chr5_2:22070624-22070643 Msa0763190:intron 30.0%
TGACACACCTAGTTATATAT+TGG - chr5_2:22070860-22070879 Msa0763190:intron 30.0%
ATCAACAGGAAAATCAACAA+TGG + chr5_2:22071133-22071152 None:intergenic 30.0%
!! AAGAATTGTGAAAGTTTTGG+TGG + chr5_2:22071161-22071180 None:intergenic 30.0%
! GACAAGAATTGTGAAAGTTT+TGG + chr5_2:22071164-22071183 None:intergenic 30.0%
TATTATGTATGCAGGTAACA+TGG - chr5_2:22071326-22071345 Msa0763190:CDS 30.0%
ATTATGTATGCAGGTAACAT+GGG - chr5_2:22071327-22071346 Msa0763190:CDS 30.0%
! TAACTATGTGTATAGTGGAA+TGG - chr5_2:22071396-22071415 Msa0763190:intron 30.0%
GCTTGATGAAATTAGCAAAT+AGG - chr5_2:22071663-22071682 Msa0763190:intron 30.0%
ACTTACATTTATGCGAAGAA+GGG + chr5_2:22072142-22072161 None:intergenic 30.0%
AACTTACATTTATGCGAAGA+AGG + chr5_2:22072143-22072162 None:intergenic 30.0%
! TTAAATTTGCTTACACATGC+AGG - chr5_2:22072224-22072243 Msa0763190:intron 30.0%
AAATCCATAATCCAAAAGAG+AGG + chr5_2:22072747-22072766 None:intergenic 30.0%
TATGGTTAGAGAAATTCGTA+TGG - chr5_2:22072772-22072791 Msa0763190:CDS 30.0%
TGGAAAAGTTGAATTAGCAA+CGG - chr5_2:22072792-22072811 Msa0763190:CDS 30.0%
AGAATAGTGACAAGTGAATT+AGG - chr5_2:22072858-22072877 Msa0763190:exon 30.0%
GGTAATTAACTAGAGTAGTA+AGG - chr5_2:22072956-22072975 Msa0763190:intron 30.0%
!! ATAAAAGATGGATTTTGAGC+GGG - chr5_2:22073007-22073026 Msa0763190:intron 30.0%
TTTAAGTATGTGAGGTGTAT+TGG - chr5_2:22073033-22073052 Msa0763190:intron 30.0%
!! AGAAAACCAAAGGTATTATC+TGG + chr5_2:22073186-22073205 None:intergenic 30.0%
!!! ATACCTTTGGTTTTCTAGTA+AGG - chr5_2:22073190-22073209 Msa0763190:five_prime_UTR 30.0%
ACAGTGTGATGAAATGAAAG+GGG + chr5_2:22066988-22067007 None:intergenic 35.0%
GACAGTGTGATGAAATGAAA+GGG + chr5_2:22066989-22067008 None:intergenic 35.0%
AGACAGTGTGATGAAATGAA+AGG + chr5_2:22066990-22067009 None:intergenic 35.0%
GTGTAGAAGAATCTATTCAG+AGG + chr5_2:22067187-22067206 None:intergenic 35.0%
GTAAAACAAAGATTCCTGAG+AGG + chr5_2:22067209-22067228 None:intergenic 35.0%
AAGCACAGTAAAAAACAGTG+TGG - chr5_2:22067357-22067376 Msa0763190:three_prime_UTR 35.0%
AAGTAATGTCAACAATGGGA+GGG - chr5_2:22067405-22067424 Msa0763190:three_prime_UTR 35.0%
GAAGAAGGAAAAGGTTGAAA+AGG + chr5_2:22067506-22067525 None:intergenic 35.0%
ATTACCATGGAAGAAGGAAA+AGG + chr5_2:22067515-22067534 None:intergenic 35.0%
GAAGAAGAAGGAATATTGAG+AGG - chr5_2:22067610-22067629 Msa0763190:CDS 35.0%
! GAACAAGTTGAAGATAAGTC+AGG - chr5_2:22067670-22067689 Msa0763190:CDS 35.0%
!!! AAGGTTTTAAATTGCGGTTG+CGG - chr5_2:22067868-22067887 Msa0763190:CDS 35.0%
! GGTTGACCTTGCTTTAAATA+TGG - chr5_2:22067938-22067957 Msa0763190:CDS 35.0%
AAATATGGTTTCGTTGCAGT+TGG - chr5_2:22067953-22067972 Msa0763190:CDS 35.0%
ACTGAAACTAAGCCATGATT+TGG - chr5_2:22068137-22068156 Msa0763190:CDS 35.0%
CTGAAACTAAGCCATGATTT+GGG - chr5_2:22068138-22068157 Msa0763190:CDS 35.0%
TCTCACATTCATTTCGTCAA+AGG + chr5_2:22068311-22068330 None:intergenic 35.0%
AAACCCTAAACTGTTGTACA+AGG - chr5_2:22068342-22068361 Msa0763190:intron 35.0%
AGACCTTGTACAACAGTTTA+GGG + chr5_2:22068348-22068367 None:intergenic 35.0%
AAGACCTTGTACAACAGTTT+AGG + chr5_2:22068349-22068368 None:intergenic 35.0%
GGAATACAGACTGTATATGA+TGG + chr5_2:22068546-22068565 None:intergenic 35.0%
TACTAGGGTTACACTTCAAA+CGG - chr5_2:22068644-22068663 Msa0763190:intron 35.0%
TGAGAACTATAGGCTACAAT+CGG - chr5_2:22068917-22068936 Msa0763190:intron 35.0%
ATATCAGGTCCCATTATACA+TGG + chr5_2:22068978-22068997 None:intergenic 35.0%
! ATGTATAATGGGACCTGATA+TGG - chr5_2:22068977-22068996 Msa0763190:intron 35.0%
! TGTATAATGGGACCTGATAT+GGG - chr5_2:22068978-22068997 Msa0763190:intron 35.0%
! AACTTCGATTTGAAAATGCC+CGG - chr5_2:22069015-22069034 Msa0763190:intron 35.0%
! TCAAGGCGAAATCTAAAATG+AGG - chr5_2:22069548-22069567 Msa0763190:intron 35.0%
TAGACATGAACATTTATCCG+AGG - chr5_2:22070094-22070113 Msa0763190:CDS 35.0%
TCTTGAAAATGTGATGGTTC+AGG + chr5_2:22070174-22070193 None:intergenic 35.0%
!! TGAACCATCACATTTTCAAG+AGG - chr5_2:22070173-22070192 Msa0763190:CDS 35.0%
!! GAACCATCACATTTTCAAGA+GGG - chr5_2:22070174-22070193 Msa0763190:CDS 35.0%
! AGATGAGAAATCACTTGCTA+TGG - chr5_2:22070215-22070234 Msa0763190:CDS 35.0%
TTAAGCAAAGGAATGAGTTG+AGG - chr5_2:22070376-22070395 Msa0763190:intron 35.0%
TACCTTGTAGCAAAAATGGA+TGG - chr5_2:22070569-22070588 Msa0763190:intron 35.0%
!! TTCCATCCATTTTTGCTACA+AGG + chr5_2:22070574-22070593 None:intergenic 35.0%
TGTTTCCAACAATTGTTGCT+AGG - chr5_2:22070595-22070614 Msa0763190:intron 35.0%
GTTTCCAACAATTGTTGCTA+GGG - chr5_2:22070596-22070615 Msa0763190:intron 35.0%
ACTCAGACCTATCTTATCAT+TGG + chr5_2:22070794-22070813 None:intergenic 35.0%
TCTGAGTATCCAATATGTGT+CGG - chr5_2:22070807-22070826 Msa0763190:intron 35.0%
AAGAAAATGAGTCTCTCTAG+TGG + chr5_2:22071073-22071092 None:intergenic 35.0%
! CTAGAGAGACTCATTTTCTT+CGG - chr5_2:22071073-22071092 Msa0763190:intron 35.0%
GCTAGAAACATATCAGATCT+TGG - chr5_2:22071484-22071503 Msa0763190:intron 35.0%
AGAAACATATCAGATCTTGG+AGG - chr5_2:22071487-22071506 Msa0763190:intron 35.0%
AAGACTTTGGTATGAGGATA+AGG + chr5_2:22071851-22071870 None:intergenic 35.0%
AGATCAAAGACTTTGGTATG+AGG + chr5_2:22071857-22071876 None:intergenic 35.0%
GTACCATTCTTAAAATCACC+CGG - chr5_2:22071905-22071924 Msa0763190:intron 35.0%
ACTTCAATATCTTGATGTCG+AGG - chr5_2:22071954-22071973 Msa0763190:intron 35.0%
AGATGGATGCACTTTCTAAT+GGG - chr5_2:22072058-22072077 Msa0763190:CDS 35.0%
TGGGAACTCATTAAATGAAG+TGG - chr5_2:22072077-22072096 Msa0763190:CDS 35.0%
! TCAGGTTGTCTTCTTATCAT+GGG - chr5_2:22072504-22072523 Msa0763190:CDS 35.0%
AATACCCTGCATCAAATTGA+AGG - chr5_2:22072606-22072625 Msa0763190:CDS 35.0%
ACTAACAGCAATTGCTTTGT+TGG - chr5_2:22072645-22072664 Msa0763190:intron 35.0%
! CTAACAGCAATTGCTTTGTT+GGG - chr5_2:22072646-22072665 Msa0763190:intron 35.0%
ACAATTTCAATGACTGGACA+AGG + chr5_2:22072719-22072738 None:intergenic 35.0%
GAAGGAACAATTTCAATGAC+TGG + chr5_2:22072725-22072744 None:intergenic 35.0%
! AATTGTTCCTTCCTCTCTTT+TGG - chr5_2:22072733-22072752 Msa0763190:CDS 35.0%
ACAATTCATGTTCCCATAGT+TGG + chr5_2:22072935-22072954 None:intergenic 35.0%
ACTATGGGAACATGAATTGT+AGG - chr5_2:22072935-22072954 Msa0763190:intron 35.0%
TTAACTAGAGTAGTAAGGGA+AGG - chr5_2:22072961-22072980 Msa0763190:intron 35.0%
!! TAAAAGATGGATTTTGAGCG+GGG - chr5_2:22073008-22073027 Msa0763190:intron 35.0%
TGGTATTTATGTATGTGAGG+AGG - chr5_2:22073131-22073150 Msa0763190:intron 35.0%
GGTATTTATGTATGTGAGGA+GGG - chr5_2:22073132-22073151 Msa0763190:intron 35.0%
!! CATGAAGAAGGTTCTGAAAC+TGG + chr5_2:22067082-22067101 None:intergenic 40.0%
CAGTTTCAGAACCTTCTTCA+TGG - chr5_2:22067080-22067099 Msa0763190:three_prime_UTR 40.0%
!!! GTTTTAGAGAGTATACCAGC+AGG + chr5_2:22067107-22067126 None:intergenic 40.0%
TAGATTCTTCTACACCTCTC+AGG - chr5_2:22067192-22067211 Msa0763190:three_prime_UTR 40.0%
CAAGTAATGTCAACAATGGG+AGG - chr5_2:22067404-22067423 Msa0763190:three_prime_UTR 40.0%
AGGAAAAGGTTGAAAAGGCA+TGG + chr5_2:22067501-22067520 None:intergenic 40.0%
! TCAACCTTTTCCTTCTTCCA+TGG - chr5_2:22067508-22067527 Msa0763190:three_prime_UTR 40.0%
GAGAGGTAAAGAAGAGATCA+TGG - chr5_2:22067627-22067646 Msa0763190:CDS 40.0%
GAAGAGATCATGGATCAAAG+TGG - chr5_2:22067637-22067656 Msa0763190:CDS 40.0%
ATCATGGATCAAAGTGGTTC+AGG - chr5_2:22067643-22067662 Msa0763190:CDS 40.0%
! GCAACCGCAATTTAAAACCT+TGG + chr5_2:22067869-22067888 None:intergenic 40.0%
AGCAAGGTCAACCATATGTT+AGG + chr5_2:22067931-22067950 None:intergenic 40.0%
! CTTTGTTTATCATCTGGGTG+TGG + chr5_2:22068117-22068136 None:intergenic 40.0%
! TCTGAAACCAGAACTTAACC+TGG + chr5_2:22068176-22068195 None:intergenic 40.0%
TTAACCTTACCTGTCACATG+TGG - chr5_2:22068581-22068600 Msa0763190:CDS 40.0%
ACTAGGGTTACACTTCAAAC+GGG - chr5_2:22068645-22068664 Msa0763190:intron 40.0%
TGATCATCAAAGCCCATATC+AGG + chr5_2:22068993-22069012 None:intergenic 40.0%
! GGGCATTTTCAAATCGAAGT+TGG + chr5_2:22069016-22069035 None:intergenic 40.0%
AAATGCCCGGTTAAAAGAAG+AGG - chr5_2:22069028-22069047 Msa0763190:CDS 40.0%
CTTGAGCCTCAATATGTGTT+GGG + chr5_2:22069533-22069552 None:intergenic 40.0%
!!! GTCATGGAATTTTTTTCCCG+TGG + chr5_2:22069914-22069933 None:intergenic 40.0%
TTCATGTCTAAGTCCAGTGA+TGG + chr5_2:22070084-22070103 None:intergenic 40.0%
ATGGTTCAGGTGGTAACATA+GGG + chr5_2:22070161-22070180 None:intergenic 40.0%
TGAAAATGTGATGGTTCAGG+TGG + chr5_2:22070171-22070190 None:intergenic 40.0%
AGAGGGTGGTCTCTTATTAA+TGG - chr5_2:22070191-22070210 Msa0763190:CDS 40.0%
GGAACTTGCAGATTCTTCTA+TGG - chr5_2:22070236-22070255 Msa0763190:CDS 40.0%
!! AGCATGCTAGGGTTTTTCAA+TGG - chr5_2:22070343-22070362 Msa0763190:intron 40.0%
GGCCTTTGAATCTTAAGCAA+AGG - chr5_2:22070364-22070383 Msa0763190:intron 40.0%
ATTATAGCTTCAGGTGCTTC+TGG - chr5_2:22070633-22070652 Msa0763190:intron 40.0%
! ATCAGCCAATCACTTGTTAG+TGG - chr5_2:22070759-22070778 Msa0763190:intron 40.0%
CATAGCCACTAACAAGTGAT+TGG + chr5_2:22070767-22070786 None:intergenic 40.0%
TGTCTGATACCGACACATAT+TGG + chr5_2:22070819-22070838 None:intergenic 40.0%
CATCAGACTCAACACAAACA+TGG + chr5_2:22070898-22070917 None:intergenic 40.0%
ATTCCAAGTTCTTTCTCCGT+TGG - chr5_2:22071044-22071063 Msa0763190:intron 40.0%
ATACCAACGGAGAAAGAACT+TGG + chr5_2:22071050-22071069 None:intergenic 40.0%
! TTTTGGTGGAAGCTATCAAC+AGG + chr5_2:22071147-22071166 None:intergenic 40.0%
ATTCTTGTCCCAAATACTGC+AGG - chr5_2:22071175-22071194 Msa0763190:intron 40.0%
GTGATTCAAGACATGCCAAA+TGG - chr5_2:22071213-22071232 Msa0763190:CDS 40.0%
ACATGCCAAATGGCTATTCA+AGG - chr5_2:22071223-22071242 Msa0763190:CDS 40.0%
CATGCCAAATGGCTATTCAA+GGG - chr5_2:22071224-22071243 Msa0763190:CDS 40.0%
! GTGTATAGTGGAATGGCATT+TGG - chr5_2:22071403-22071422 Msa0763190:intron 40.0%
! TTTTGCAGAGGCAATGTGAA+AGG - chr5_2:22071446-22071465 Msa0763190:intron 40.0%
TTTGCAGAGGCAATGTGAAA+GGG - chr5_2:22071447-22071466 Msa0763190:intron 40.0%
!! CTGATATGTTTCTAGCCATG+AGG + chr5_2:22071480-22071499 None:intergenic 40.0%
AGCCTTAATATGACCACTTG+TGG - chr5_2:22071701-22071720 Msa0763190:intron 40.0%
CACCACAAGTGGTCATATTA+AGG + chr5_2:22071706-22071725 None:intergenic 40.0%
CTTAATATGACCACTTGTGG+TGG - chr5_2:22071704-22071723 Msa0763190:intron 40.0%
ATCAGATTCACCAGAAGACA+CGG - chr5_2:22071745-22071764 Msa0763190:intron 40.0%
ACACGGTTAGAATCACAACT+AGG - chr5_2:22071762-22071781 Msa0763190:intron 40.0%
!! GTTCCGGGTGATTTTAAGAA+TGG + chr5_2:22071911-22071930 None:intergenic 40.0%
CAGATGGATGCACTTTCTAA+TGG - chr5_2:22072057-22072076 Msa0763190:CDS 40.0%
GAAGTGGCTCATATTGCTAA+CGG - chr5_2:22072093-22072112 Msa0763190:CDS 40.0%
TATTGCTAACGGTTCACATC+CGG - chr5_2:22072104-22072123 Msa0763190:CDS 40.0%
AGAGTTGCACAGATCAATCT+GGG - chr5_2:22072289-22072308 Msa0763190:intron 40.0%
GAGCTTAGTAGTCTACACTA+CGG - chr5_2:22072311-22072330 Msa0763190:intron 40.0%
TCAGCATTTGACGAAACCAT+TGG + chr5_2:22072420-22072439 None:intergenic 40.0%
GCTGATACATCATCTGAACA+AGG - chr5_2:22072435-22072454 Msa0763190:intron 40.0%
TTGGCACTAGTAGTAGATGA+TGG + chr5_2:22072474-22072493 None:intergenic 40.0%
! CTCAGGTTGTCTTCTTATCA+TGG - chr5_2:22072503-22072522 Msa0763190:CDS 40.0%
GAAAGGTTAAGCTTTGCAGA+AGG + chr5_2:22072555-22072574 None:intergenic 40.0%
TGATTGCTGTGACACTTGAA+AGG + chr5_2:22072572-22072591 None:intergenic 40.0%
!! TTTGATGCAGGGTATTGCAA+AGG + chr5_2:22072602-22072621 None:intergenic 40.0%
AGCACCTTCAATTTGATGCA+GGG + chr5_2:22072613-22072632 None:intergenic 40.0%
!! CAAATTGAAGGTGCTCTTTG+TGG - chr5_2:22072618-22072637 Msa0763190:CDS 40.0%
CCATAATCCAAAAGAGAGGA+AGG + chr5_2:22072743-22072762 None:intergenic 40.0%
! CCTTCCTCTCTTTTGGATTA+TGG - chr5_2:22072740-22072759 Msa0763190:CDS 40.0%
AGTAGTAAGGGAAGGAACAA+GGG - chr5_2:22072969-22072988 Msa0763190:intron 40.0%
TTTGTATGGGAGTTAGAGTG+TGG - chr5_2:22073091-22073110 Msa0763190:intron 40.0%
CGACCTTACTAGAAAACCAA+AGG + chr5_2:22073196-22073215 None:intergenic 40.0%
TCTCGTATGATTCGTGATGA+TGG - chr5_2:22073219-22073238 Msa0763190:five_prime_UTR 40.0%
ATGGCCTCATTAGTTAGTCA+GGG - chr5_2:22073238-22073257 Msa0763190:five_prime_UTR 40.0%
CATCACACTGTCTCTTTGTG+TGG - chr5_2:22066997-22067016 Msa0763190:three_prime_UTR 45.0%
TGCTCGTCAGATCCAAGAAA+TGG - chr5_2:22067756-22067775 Msa0763190:CDS 45.0%
GTGGTTTCAGTCCCAAATCA+TGG + chr5_2:22068152-22068171 None:intergenic 45.0%
GAATCGTCGAACTCAGATGA+AGG - chr5_2:22068194-22068213 Msa0763190:intron 45.0%
ATACATGGCCCACCACAATT+AGG + chr5_2:22068963-22068982 None:intergenic 45.0%
!! TTGTGGTGGGCCATGTATAA+TGG - chr5_2:22068965-22068984 Msa0763190:intron 45.0%
!! TGTGGTGGGCCATGTATAAT+GGG - chr5_2:22068966-22068985 Msa0763190:intron 45.0%
TCTAGTTAGTAATCAGGGGC+CGG - chr5_2:22069507-22069526 Msa0763190:intron 45.0%
CCTTGAGCCTCAATATGTGT+TGG + chr5_2:22069534-22069553 None:intergenic 45.0%
CCAACACATATTGAGGCTCA+AGG - chr5_2:22069531-22069550 Msa0763190:intron 45.0%
!! AGTGATGGTGGCATAAGAGA+TGG + chr5_2:22070069-22070088 None:intergenic 45.0%
ATCTCTTATGCCACCATCAC+TGG - chr5_2:22070068-22070087 Msa0763190:CDS 45.0%
ATGTCTAAGTCCAGTGATGG+TGG + chr5_2:22070081-22070100 None:intergenic 45.0%
ACAGGAATCATCTCTGTGCA+TGG + chr5_2:22070138-22070157 None:intergenic 45.0%
GATGGTTCAGGTGGTAACAT+AGG + chr5_2:22070162-22070181 None:intergenic 45.0%
CCACCCTCTTGAAAATGTGA+TGG + chr5_2:22070180-22070199 None:intergenic 45.0%
!! CCATCACATTTTCAAGAGGG+TGG - chr5_2:22070177-22070196 Msa0763190:CDS 45.0%
TTCGTAGCGGTGAGAATGAT+AGG - chr5_2:22070301-22070320 Msa0763190:intron 45.0%
TCGTAGCGGTGAGAATGATA+GGG - chr5_2:22070302-22070321 Msa0763190:intron 45.0%
CTTGCCCTAGCAACAATTGT+TGG + chr5_2:22070603-22070622 None:intergenic 45.0%
CACGTGTGTCAGTGTTATGT+TGG + chr5_2:22070842-22070861 None:intergenic 45.0%
! GTCTCTCTAGTGGATACCAA+CGG + chr5_2:22071063-22071082 None:intergenic 45.0%
GTATTGTCAGCAAAATGCCG+AGG - chr5_2:22071095-22071114 Msa0763190:intron 45.0%
AGGAAAATCAACAATGGCCC+AGG + chr5_2:22071127-22071146 None:intergenic 45.0%
GTCTTGAATCACACAACCAG+AGG + chr5_2:22071205-22071224 None:intergenic 45.0%
CGTACCCTTGAATAGCCATT+TGG + chr5_2:22071231-22071250 None:intergenic 45.0%
! TTTGGTGCACAACGTTGGTT+AGG - chr5_2:22071421-22071440 Msa0763190:intron 45.0%
! GTTGGTTAGGAGTTTTGCAG+AGG - chr5_2:22071434-22071453 Msa0763190:intron 45.0%
GATTGCAGTGATACCTTCTC+CGG - chr5_2:22071628-22071647 Msa0763190:intron 45.0%
GTGATTCTAACCGTGTCTTC+TGG + chr5_2:22071758-22071777 None:intergenic 45.0%
ACTAGGAAAATCACTGAGCC+TGG - chr5_2:22071779-22071798 Msa0763190:intron 45.0%
AAGCCAAGTGGTTGAAACTG+CGG + chr5_2:22071828-22071847 None:intergenic 45.0%
ATGAGGATAAGGAAGCCAAG+TGG + chr5_2:22071840-22071859 None:intergenic 45.0%
ACGGAGGAGATCAAAGACTT+TGG + chr5_2:22071864-22071883 None:intergenic 45.0%
AGAATGGTACCTGAGATCTG+TGG + chr5_2:22071895-22071914 None:intergenic 45.0%
CTGCATTTGACTACAGTTCC+GGG + chr5_2:22071926-22071945 None:intergenic 45.0%
GCTGCATTTGACTACAGTTC+CGG + chr5_2:22071927-22071946 None:intergenic 45.0%
GAACTGTAGTCAAATGCAGC+TGG - chr5_2:22071927-22071946 Msa0763190:intron 45.0%
TGATGTCGAGGTCTAGATTG+CGG - chr5_2:22071966-22071985 Msa0763190:intron 45.0%
ATTGCTAACGGTTCACATCC+GGG - chr5_2:22072105-22072124 Msa0763190:CDS 45.0%
AGAAGGGAAATGCAGTTTCC+CGG + chr5_2:22072126-22072145 None:intergenic 45.0%
GAGAGTTGCACAGATCAATC+TGG - chr5_2:22072288-22072307 Msa0763190:intron 45.0%
TCGATCCAACTAGCTATGAG+TGG - chr5_2:22072345-22072364 Msa0763190:intron 45.0%
CTTGTCCACTCATAGCTAGT+TGG + chr5_2:22072353-22072372 None:intergenic 45.0%
! GAAGGAGTGCAATGCATGAA+GGG + chr5_2:22072377-22072396 None:intergenic 45.0%
CTATCATGAACCCTTGTGGA+AGG + chr5_2:22072395-22072414 None:intergenic 45.0%
! AGGGTTCATGATAGTGCCAA+TGG - chr5_2:22072401-22072420 Msa0763190:intron 45.0%
! TCATCTGAACAAGGTGTCAC+AGG - chr5_2:22072444-22072463 Msa0763190:intron 45.0%
ACAACCTGAGTTAGCAGCAT+TGG + chr5_2:22072493-22072512 None:intergenic 45.0%
GAGCACCTTCAATTTGATGC+AGG + chr5_2:22072614-22072633 None:intergenic 45.0%
!! ATTGAAGGTGCTCTTTGTGG+CGG - chr5_2:22072621-22072640 Msa0763190:CDS 45.0%
GAGTAGTAAGGGAAGGAACA+AGG - chr5_2:22072968-22072987 Msa0763190:intron 45.0%
GCGGGGAATTTAAGTATGTG+AGG - chr5_2:22073025-22073044 Msa0763190:intron 45.0%
TATGTATGTGAGGAGGGTAG+AGG - chr5_2:22073138-22073157 Msa0763190:intron 45.0%
ATGTATGTGAGGAGGGTAGA+GGG - chr5_2:22073139-22073158 Msa0763190:intron 45.0%
AGCGCACCAGATAATACCTT+TGG - chr5_2:22073177-22073196 Msa0763190:five_prime_UTR 45.0%
GATGGCCTCATTAGTTAGTC+AGG - chr5_2:22073237-22073256 Msa0763190:five_prime_UTR 45.0%
ACCACCCTGACTAACTAATG+AGG + chr5_2:22073245-22073264 None:intergenic 45.0%
ATTAGTTAGTCAGGGTGGTG+TGG - chr5_2:22073246-22073265 Msa0763190:five_prime_UTR 45.0%
AACCTTCTTCATGGTCCTGC+TGG - chr5_2:22067089-22067108 Msa0763190:three_prime_UTR 50.0%
TACCAGCAGGACCATGAAGA+AGG + chr5_2:22067094-22067113 None:intergenic 50.0%
AACCACGCCAGGTTAAGTTC+TGG - chr5_2:22068166-22068185 Msa0763190:CDS 50.0%
AACCAGAACTTAACCTGGCG+TGG + chr5_2:22068171-22068190 None:intergenic 50.0%
GAGACCACATGTGACAGGTA+AGG + chr5_2:22068588-22068607 None:intergenic 50.0%
GTTTGGAGACCACATGTGAC+AGG + chr5_2:22068593-22068612 None:intergenic 50.0%
AGCCTCAATATGTGTTGGGC+CGG + chr5_2:22069529-22069548 None:intergenic 50.0%
TGGTCGTCCACTCCAAACAA+TGG - chr5_2:22070035-22070054 Msa0763190:CDS 50.0%
!! ATGGAGGTGGTGCCATTGTT+TGG + chr5_2:22070050-22070069 None:intergenic 50.0%
! GATGGTGGCATAAGAGATGG+AGG + chr5_2:22070066-22070085 None:intergenic 50.0%
! GGCATTGGATCAAAGTGCCT+CGG + chr5_2:22070114-22070133 None:intergenic 50.0%
ATCTCTGTGCATGGTGGCAT+TGG + chr5_2:22070129-22070148 None:intergenic 50.0%
GGAATCATCTCTGTGCATGG+TGG + chr5_2:22070135-22070154 None:intergenic 50.0%
TCAGGTGGTAACATAGGGAC+AGG + chr5_2:22070156-22070175 None:intergenic 50.0%
GTCAAATGAACGGACCGCTT+TGG - chr5_2:22070277-22070296 Msa0763190:intron 50.0%
TCACCGCTACGAATCCAAAG+CGG + chr5_2:22070294-22070313 None:intergenic 50.0%
TGTCAGCAAAATGCCGAGGA+AGG - chr5_2:22071099-22071118 Msa0763190:intron 50.0%
AAAATGCCGAGGAAGGAACC+TGG - chr5_2:22071106-22071125 Msa0763190:intron 50.0%
AAATGCCGAGGAAGGAACCT+GGG - chr5_2:22071107-22071126 Msa0763190:intron 50.0%
CTTGTCCCAAATACTGCAGG+AGG - chr5_2:22071178-22071197 Msa0763190:intron 50.0%
GAGGACCTCCTGCAGTATTT+GGG + chr5_2:22071186-22071205 None:intergenic 50.0%
AGAGGACCTCCTGCAGTATT+TGG + chr5_2:22071187-22071206 None:intergenic 50.0%
AAATACTGCAGGAGGTCCTC+TGG - chr5_2:22071186-22071205 Msa0763190:intron 50.0%
!! TGGCATTTGGTGCACAACGT+TGG - chr5_2:22071416-22071435 Msa0763190:intron 50.0%
TGAAAGGGTTGCAAGCCTCA+TGG - chr5_2:22071462-22071481 Msa0763190:intron 50.0%
ATCAAGCTCTTTCGCGCTTC+CGG + chr5_2:22071650-22071669 None:intergenic 50.0%
CCATGATTGTCCACCACAAG+TGG + chr5_2:22071717-22071736 None:intergenic 50.0%
!! CCACTTGTGGTGGACAATCA+TGG - chr5_2:22071714-22071733 Msa0763190:intron 50.0%
CGAGAATCACTCCACTAGGT+TGG + chr5_2:22071805-22071824 None:intergenic 50.0%
! GGAAGGAGTGCAATGCATGA+AGG + chr5_2:22072378-22072397 None:intergenic 50.0%
TGCATTGCACTCCTTCCACA+AGG - chr5_2:22072381-22072400 Msa0763190:intron 50.0%
GCATTGCACTCCTTCCACAA+GGG - chr5_2:22072382-22072401 Msa0763190:intron 50.0%
GGCACTATCATGAACCCTTG+TGG + chr5_2:22072399-22072418 None:intergenic 50.0%
AGTGCCAATGCTGCTAACTC+AGG - chr5_2:22072486-22072505 Msa0763190:CDS 50.0%
! AGGAGTGCACACTACTTGGA+GGG + chr5_2:22072699-22072718 None:intergenic 50.0%
! AAGGAGTGCACACTACTTGG+AGG + chr5_2:22072700-22072719 None:intergenic 50.0%
! GACAAGGAGTGCACACTACT+TGG + chr5_2:22072703-22072722 None:intergenic 50.0%
GCCTCATTAGTTAGTCAGGG+TGG - chr5_2:22073241-22073260 Msa0763190:five_prime_UTR 50.0%
TTAGTCAGGGTGGTGTGGTT+CGG - chr5_2:22073251-22073270 Msa0763190:five_prime_UTR 50.0%
! TTTGGGACTGAAACCACGCC+AGG - chr5_2:22068155-22068174 Msa0763190:CDS 55.0%
!! GGTGGTGCCATTGTTTGGAG+TGG + chr5_2:22070045-22070064 None:intergenic 55.0%
GGTGGCATAAGAGATGGAGG+TGG + chr5_2:22070063-22070082 None:intergenic 55.0%
! GGACCGCTTTGGATTCGTAG+CGG - chr5_2:22070288-22070307 Msa0763190:intron 55.0%
GTGCTTCTGGCCATGCAAGT+GGG - chr5_2:22070646-22070665 Msa0763190:intron 55.0%
GCTGAAGAGTCCCACTTGCA+TGG + chr5_2:22070659-22070678 None:intergenic 55.0%
TGCAAGTGGGACTCTTCAGC+TGG - chr5_2:22070659-22070678 Msa0763190:intron 55.0%
AGTGGGACTCTTCAGCTGGT+AGG - chr5_2:22070663-22070682 Msa0763190:intron 55.0%
AATGGCCCAGGTTCCTTCCT+CGG + chr5_2:22071115-22071134 None:intergenic 55.0%
! ATCACTCCACTAGGTTGGCC+AGG + chr5_2:22071800-22071819 None:intergenic 55.0%
TCGCCGCAGTTTCAACCACT+TGG - chr5_2:22071822-22071841 Msa0763190:intron 55.0%
GAGATCTGTGGCGTTCGTCA+CGG + chr5_2:22071883-22071902 None:intergenic 55.0%
TGACGAACGCCACAGATCTC+AGG - chr5_2:22071883-22071902 Msa0763190:intron 55.0%
! TTGGAGGGTGCACTAGTGGT+TGG + chr5_2:22072684-22072703 None:intergenic 55.0%
! CTACTTGGAGGGTGCACTAG+TGG + chr5_2:22072688-22072707 None:intergenic 55.0%
TAGTCAGGGTGGTGTGGTTC+GGG - chr5_2:22073252-22073271 Msa0763190:five_prime_UTR 55.0%
GGCCGGCCCAACACATATTG+AGG - chr5_2:22069524-22069543 Msa0763190:intron 60.0%
GGTGCTTCTGGCCATGCAAG+TGG - chr5_2:22070645-22070664 Msa0763190:intron 60.0%
CTCTTTCGCGCTTCCGGAGA+AGG + chr5_2:22071644-22071663 None:intergenic 60.0%
ACTGAGCCTGGCCAACCTAG+TGG - chr5_2:22071791-22071810 Msa0763190:intron 60.0%
GCGGCGAGAATCACTCCACT+AGG + chr5_2:22071809-22071828 None:intergenic 60.0%
ATCTGTGGCGTTCGTCACGG+AGG + chr5_2:22071880-22071899 None:intergenic 60.0%
TGGTGCGCTCTTGACTCCCT+CGG + chr5_2:22073166-22073185 None:intergenic 60.0%
TGAGGAGGGTAGAGGGACCG+AGG - chr5_2:22073146-22073165 Msa0763190:intron 65.0%
GAGGAGGGTAGAGGGACCGA+GGG - chr5_2:22073147-22073166 Msa0763190:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 22066975 22073287 22066975 ID=Msa0763190;Name=Msa0763190
chr5_2 mRNA 22066975 22073287 22066975 ID=Msa0763190-mRNA-1;Parent=Msa0763190;Name=Msa0763190-mRNA-1;_AED=0.05;_eAED=0.05;_QI=211|1|0.83|1|0.90|0.83|12|580|802
chr5_2 exon 22066975 22068016 22066975 ID=Msa0763190-mRNA-1:exon:9124;Parent=Msa0763190-mRNA-1
chr5_2 exon 22068107 22068202 22068107 ID=Msa0763190-mRNA-1:exon:9123;Parent=Msa0763190-mRNA-1
chr5_2 exon 22068358 22068626 22068358 ID=Msa0763190-mRNA-1:exon:9122;Parent=Msa0763190-mRNA-1
chr5_2 exon 22068754 22068922 22068754 ID=Msa0763190-mRNA-1:exon:9121;Parent=Msa0763190-mRNA-1
chr5_2 exon 22069017 22069229 22069017 ID=Msa0763190-mRNA-1:exon:9120;Parent=Msa0763190-mRNA-1
chr5_2 exon 22069582 22069683 22069582 ID=Msa0763190-mRNA-1:exon:9119;Parent=Msa0763190-mRNA-1
chr5_2 exon 22069792 22070262 22069792 ID=Msa0763190-mRNA-1:exon:9118;Parent=Msa0763190-mRNA-1
chr5_2 exon 22071213 22071404 22071213 ID=Msa0763190-mRNA-1:exon:9117;Parent=Msa0763190-mRNA-1
chr5_2 exon 22072047 22072164 22072047 ID=Msa0763190-mRNA-1:exon:9116;Parent=Msa0763190-mRNA-1
chr5_2 exon 22072480 22072655 22072480 ID=Msa0763190-mRNA-1:exon:9115;Parent=Msa0763190-mRNA-1
chr5_2 exon 22072733 22072948 22072733 ID=Msa0763190-mRNA-1:exon:9114;Parent=Msa0763190-mRNA-1
chr5_2 exon 22073152 22073287 22073152 ID=Msa0763190-mRNA-1:exon:9113;Parent=Msa0763190-mRNA-1
chr5_2 five_prime_UTR 22073152 22073287 22073152 ID=Msa0763190-mRNA-1:five_prime_utr;Parent=Msa0763190-mRNA-1
chr5_2 five_prime_UTR 22072874 22072948 22072874 ID=Msa0763190-mRNA-1:five_prime_utr;Parent=Msa0763190-mRNA-1
chr5_2 CDS 22072733 22072873 22072733 ID=Msa0763190-mRNA-1:cds;Parent=Msa0763190-mRNA-1
chr5_2 CDS 22072480 22072655 22072480 ID=Msa0763190-mRNA-1:cds;Parent=Msa0763190-mRNA-1
chr5_2 CDS 22072047 22072164 22072047 ID=Msa0763190-mRNA-1:cds;Parent=Msa0763190-mRNA-1
chr5_2 CDS 22071213 22071404 22071213 ID=Msa0763190-mRNA-1:cds;Parent=Msa0763190-mRNA-1
chr5_2 CDS 22069792 22070262 22069792 ID=Msa0763190-mRNA-1:cds;Parent=Msa0763190-mRNA-1
chr5_2 CDS 22069582 22069683 22069582 ID=Msa0763190-mRNA-1:cds;Parent=Msa0763190-mRNA-1
chr5_2 CDS 22069017 22069229 22069017 ID=Msa0763190-mRNA-1:cds;Parent=Msa0763190-mRNA-1
chr5_2 CDS 22068754 22068922 22068754 ID=Msa0763190-mRNA-1:cds;Parent=Msa0763190-mRNA-1
chr5_2 CDS 22068358 22068626 22068358 ID=Msa0763190-mRNA-1:cds;Parent=Msa0763190-mRNA-1
chr5_2 CDS 22068107 22068202 22068107 ID=Msa0763190-mRNA-1:cds;Parent=Msa0763190-mRNA-1
chr5_2 CDS 22067555 22068016 22067555 ID=Msa0763190-mRNA-1:cds;Parent=Msa0763190-mRNA-1
chr5_2 three_prime_UTR 22066975 22067554 22066975 ID=Msa0763190-mRNA-1:three_prime_utr;Parent=Msa0763190-mRNA-1
Gene Sequence

>Msa0763190

ATGTATGGTGATTGTCAAGTAATGTCAACAATGGGAGGGAATGTAGTAGTAAACTCAGAATCTCTCTTCTCTTCTCCGATCCATAACTCTAACTTCAACTTCATGTCAACCATGCCTTTTCAACCTTTTCCTTCTTCCATGAAAGAAGAAGAAGGAATATTGAGAGGTAAAGAAGAGATCATGGATCAAAGTGGTTCAGGAAGTGAACAAGTTGAAGATAAGTCAGGAAATGAACAAGAGATTAATAATGAACAACAGGCTACAAAGAAGAAACGTTATCATAGACACACTGCTCGTCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCACACCCAGATGATAAACAAAGACTGAAACTAAGCCATGATTTGGGACTGAAACCACGCCAGGTTAAGTTCTGGTTTCAGAATCGTCGAACTCAGATGAAGGCACAACAAGATCGTTCTGATAATGTGATACTTAGAGCAGAGAATGAGAGTTTGAAGAATGAGAACTATAGGCTACAATCGGCATTACGTAATATTTTATGTCCTAATTGTGGTGGGCCATGTATAATGGGACCTGATATGGGCTTTGATGATCACCAACTTCGATTTGAAAATGCCCGGTTAAAAGAAGAGCTAGAACGTGTGTGTTGTATAACATCAAGATACACTGGTCGTCCACTCCAAACAATGGCACCACCTCCATCTCTTATGCCACCATCACTGGACTTAGACATGAACATTTATCCGAGGCACTTTGATCCAATGCCACCATGCACAGAGATGATTCCTGTCCCTATGTTACCACCTGAACCATCACATTTTCAAGAGGGTGGTCTCTTATTAATGGAAGATGAGAAATCACTTGCTATGGAACTTGCAGATTCTTCTATGGCTGAGCTTGTTAAGATGTGTCAAATGAACGGACCGCTTTGGATTCGTAGCGGTGAGAATGATAGGGAAGTTCTTAATTTTGATGAGCATGCTAGGGTTTTTCAATGGCCTTTGAATCTTAAGCAAAGGAATGAGTTGAGGAATGAAGCTACACGTGATTCTGCTGTTGTTATCATGAATAGTGTTACTCTTGTTGATGCTTTTCTTGATGCTCAAAAATGGATGGAATTGTTTCCAACAATTGTTGCTAGGGCAAGAACTGTTCAAATTATAGCTTCAGGTGCTTCTGGCCATGCAAGTGGGACTCTTCAGCTGATGCACGCAGAATTCCAAGTTCTTTCTCCGTTGGTATCCACTAGAGAGACTCATTTTCTTCGGTATTGTCAGCAAAATGCCGAGGAAGGAACCTGGGCCATTGTTGATTTTCCTGTTGATAGCTTCCACCAAAACTTTCACAATTCTTGTCCCAAATACTGCAGGAGGTCCTCTGGTTGTGTGATTCAAGACATGCCAAATGGCTATTCAAGGGTAACATGGGTTGAGCATGCAAAAGTTGTAGAGAAACCTGTCCATCAAATATTTAGTAACTATGTGTATAGTGGAATGGCATTTGGTGCACAACGTTGGTTAGGAGTTTTGCAGAGGCAATGTGAAAGGGTTGCAAGCCTCATGGCTAGAAACATATCAGATCTTGGAGTGATACCTTCTCCGGAAGCGCGAAAGAGCTTGATGAAATTAGCAAATAGGATGATAAAAACTTTTAGCCTTAATATGACCACTTGTGGTGGACAATCATGGACTGCTATATCAGATTCACCAGAAGACACGGTTAGAATCACAACTAGGAAAATCACTGAGCCTGGCCAACCTAGTGGAGTGATTCTCGCCGCAGTTTCAACCACTTGGCTTCCTTATCCTCATACCAAAGTCTTTGATCTCCTCCGTGACGAACGCCACAGATCTCAGATGGATGCACTTTCTAATGGGAACTCATTAAATGAAGTGGCTCATATTGCTAACGGTTCACATCCGGGAAACTGCATTTCCCTTCTTCGCATAAATGTAGCAAGTAACTCATCTCAAAATGTAGAGCTAATGCTGCAAGAGAGTTGCACAGATCAATCTGGGAGCTTAGTAGTCTACACTACGGTCGACGTTGATTCGATCCAACTAGCTATGAGTGGACAAGACCCTTCATGCATTGCACTCCTTCCACAAGGGTTCATGATAGTGCCAATGGTTTCGTCAAATGCTGATACATCATCTGAACAAGGTGTCACAGGAACACCATCATCTACTACTAGTGCCAATGCTGCTAACTCAGGTTGTCTTCTTATCATGGGAATGCAAGTTCTAGCAAGCACAATTCCTTCTGCAAAGCTTAACCTTTCAAGTGTCACAGCAATCAATAATCACCTTTGCAATACCCTGCATCAAATTGAAGGTGCTCTTTGTGGCGGCACTAACAGCAATTGCTTTGTTGGGTCTTGCAATGAACCAACCACTAGTGCACCCTCCAAGTAG
Protein sequence

>Msa0763190

MYGDCQVMSTMGGNVVVNSESLFSSPIHNSNFNFMSTMPFQPFPSSMKEEEGILRGKEEIMDQSGSGSEQVEDKSGNEQEINNEQQATKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHDLGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENESLKNENYRLQSALRNILCPNCGGPCIMGPDMGFDDHQLRFENARLKEELERVCCITSRYTGRPLQTMAPPPSLMPPSLDLDMNIYPRHFDPMPPCTEMIPVPMLPPEPSHFQEGGLLLMEDEKSLAMELADSSMAELVKMCQMNGPLWIRSGENDREVLNFDEHARVFQWPLNLKQRNELRNEATRDSAVVIMNSVTLVDAFLDAQKWMELFPTIVARARTVQIIASGASGHASGTLQLMHAEFQVLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPVDSFHQNFHNSCPKYCRRSSGCVIQDMPNGYSRVTWVEHAKVVEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKSLMKLANRMIKTFSLNMTTCGGQSWTAISDSPEDTVRITTRKITEPGQPSGVILAAVSTTWLPYPHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSLVVYTTVDVDSIQLAMSGQDPSCIALLPQGFMIVPMVSSNADTSSEQGVTGTPSSTTSANAANSGCLLIMGMQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEGALCGGTNSNCFVGSCNEPTTSAPSK*