Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680150 | XP_024637633.1 | 97.059 | 170 | 5 | 0 | 1 | 170 | 1 | 170 | 1.16e-116 | 337 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680150 | I3SF91 | 97.059 | 170 | 5 | 0 | 1 | 170 | 1 | 170 | 5.53e-117 | 337 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005050 | Msa0680150 | 0.851623 | 7.867607e-61 | -8.615850e-47 |
| Msa0016120 | Msa0680150 | 0.816632 | 5.002814e-52 | -8.615850e-47 |
| Msa0018220 | Msa0680150 | 0.847431 | 1.161180e-59 | -8.615850e-47 |
| Msa0019600 | Msa0680150 | 0.840288 | 9.519419e-58 | -8.615850e-47 |
| Msa0022640 | Msa0680150 | 0.828815 | 7.288158e-55 | -8.615850e-47 |
| Msa0032840 | Msa0680150 | -0.801017 | 1.097788e-48 | -8.615850e-47 |
| Msa0036430 | Msa0680150 | 0.813429 | 2.571801e-51 | -8.615850e-47 |
| Msa0038500 | Msa0680150 | 0.816630 | 5.008605e-52 | -8.615850e-47 |
| Msa0043210 | Msa0680150 | 0.819500 | 1.124285e-52 | -8.615850e-47 |
| Msa0047190 | Msa0680150 | 0.807395 | 5.161592e-50 | -8.615850e-47 |
| Msa0048200 | Msa0680150 | 0.808498 | 3.006517e-50 | -8.615850e-47 |
| Msa0050040 | Msa0680150 | 0.849420 | 3.271837e-60 | -8.615850e-47 |
| Msa0052020 | Msa0680150 | 0.836667 | 8.180497e-57 | -8.615850e-47 |
| Msa0052460 | Msa0680150 | 0.826906 | 2.097545e-54 | -8.615850e-47 |
| Msa0053110 | Msa0680150 | 0.857929 | 1.167544e-62 | -8.615850e-47 |
| Msa0077410 | Msa0680150 | 0.811323 | 7.416660e-51 | -8.615850e-47 |
| Msa0079770 | Msa0680150 | 0.820519 | 6.570256e-53 | -8.615850e-47 |
| Msa0084500 | Msa0680150 | 0.818537 | 1.861463e-52 | -8.615850e-47 |
| Msa0097050 | Msa0680150 | 0.849640 | 2.841055e-60 | -8.615850e-47 |
| Msa0098440 | Msa0680150 | 0.845815 | 3.208769e-59 | -8.615850e-47 |
| Msa0102990 | Msa0680150 | 0.849526 | 3.055698e-60 | -8.615850e-47 |
| Msa0106790 | Msa0680150 | 0.808578 | 2.890582e-50 | -8.615850e-47 |
| Msa0118400 | Msa0680150 | 0.802191 | 6.306332e-49 | -8.615850e-47 |
| Msa0603680 | Msa0680150 | 0.807828 | 4.177980e-50 | -8.615850e-47 |
| Msa0625890 | Msa0680150 | 0.856094 | 4.058133e-62 | -8.615850e-47 |
| Msa0633750 | Msa0680150 | 0.840705 | 7.403160e-58 | -8.615850e-47 |
| Msa0634270 | Msa0680150 | 0.831224 | 1.884741e-55 | -8.615850e-47 |
| Msa0641250 | Msa0680150 | 0.822715 | 2.042259e-53 | -8.615850e-47 |
| Msa0641620 | Msa0680150 | 0.902306 | 1.109086e-78 | -8.615850e-47 |
| Msa0645050 | Msa0680150 | 0.819667 | 1.029618e-52 | -8.615850e-47 |
| Msa0663590 | Msa0680150 | 0.825614 | 4.257680e-54 | -8.615850e-47 |
| Msa0663680 | Msa0680150 | 0.859910 | 2.981470e-63 | -8.615850e-47 |
| Msa0666210 | Msa0680150 | 0.814304 | 1.649210e-51 | -8.615850e-47 |
| Msa0669840 | Msa0680150 | 0.849390 | 3.334097e-60 | -8.615850e-47 |
| Msa0672110 | Msa0680150 | 0.850056 | 2.173580e-60 | -8.615850e-47 |
| Msa0678890 | Msa0680150 | 0.841210 | 5.456947e-58 | -8.615850e-47 |
| Msa0680150 | Msa0685690 | 0.818224 | 2.191564e-52 | -8.615850e-47 |
| Msa0680150 | Msa0688500 | 0.863943 | 1.734510e-64 | -8.615850e-47 |
| Msa0680150 | Msa0691160 | 0.839301 | 1.719558e-57 | -8.615850e-47 |
| Msa0680150 | Msa0707220 | 0.852086 | 5.812940e-61 | -8.615850e-47 |
| Msa0680150 | Msa0716800 | 0.809777 | 1.599862e-50 | -8.615850e-47 |
| Msa0680150 | Msa0720040 | 0.812655 | 3.801273e-51 | -8.615850e-47 |
| Msa0680150 | Msa0720270 | 0.801119 | 1.046513e-48 | -8.615850e-47 |
| Msa0680150 | Msa0722940 | 0.880304 | 6.127415e-70 | -8.615850e-47 |
| Msa0680150 | Msa0723150 | 0.879461 | 1.222409e-69 | -8.615850e-47 |
| Msa0680150 | Msa0737190 | 0.808338 | 3.253751e-50 | -8.615850e-47 |
| Msa0680150 | Msa0739580 | 0.800232 | 1.587552e-48 | -8.615850e-47 |
| Msa0680150 | Msa0741900 | 0.802548 | 5.324481e-49 | -8.615850e-47 |
| Msa0680150 | Msa0747780 | 0.858817 | 6.348227e-63 | -8.615850e-47 |
| Msa0680150 | Msa0754030 | 0.853321 | 2.581119e-61 | -8.615850e-47 |
| Msa0680150 | Msa0757870 | 0.834769 | 2.475374e-56 | -8.615850e-47 |
| Msa0680150 | Msa0761580 | 0.861775 | 8.094922e-64 | -8.615850e-47 |
| Msa0680150 | Msa0763190 | 0.829012 | 6.532303e-55 | -8.615850e-47 |
| Msa0680150 | Msa0764820 | 0.828855 | 7.127733e-55 | -8.615850e-47 |
| Msa0680150 | Msa0770290 | 0.813570 | 2.394097e-51 | -8.615850e-47 |
| Msa0680150 | Msa0778930 | 0.809003 | 2.345287e-50 | -8.615850e-47 |
| Msa0680150 | Msa0799210 | 0.810478 | 1.130066e-50 | -8.615850e-47 |
| Msa0680150 | Msa0802840 | 0.813727 | 2.210514e-51 | -8.615850e-47 |
| Msa0680150 | Msa0807110 | 0.852913 | 3.378697e-61 | -8.615850e-47 |
| Msa0680150 | Msa0816450 | 0.812154 | 4.890209e-51 | -8.615850e-47 |
| Msa0680150 | Msa0833040 | 0.852408 | 4.709400e-61 | -8.615850e-47 |
| Msa0680150 | Msa0841320 | 0.810567 | 1.081220e-50 | -8.615850e-47 |
| Msa0680150 | Msa0843290 | 0.808044 | 3.757045e-50 | -8.615850e-47 |
| Msa0680150 | Msa0844560 | 0.800200 | 1.611165e-48 | -8.615850e-47 |
| Msa0680150 | Msa0849280 | 0.802844 | 4.626962e-49 | -8.615850e-47 |
| Msa0680150 | Msa0862100 | 0.818676 | 1.731255e-52 | -8.615850e-47 |
| Msa0680150 | Msa0867350 | 0.873431 | 1.478894e-67 | -8.615850e-47 |
| Msa0680150 | Msa0872310 | 0.846588 | 1.976488e-59 | -8.615850e-47 |
| Msa0680150 | Msa0873190 | 0.841217 | 5.432942e-58 | -8.615850e-47 |
| Msa0680150 | Msa0876690 | 0.808326 | 3.272860e-50 | -8.615850e-47 |
| Msa0680150 | Msa0885060 | 0.825721 | 4.017352e-54 | -8.615850e-47 |
| Msa0680150 | Msa0898730 | 0.861473 | 1.001347e-63 | -8.615850e-47 |
| Msa0680150 | Msa0905550 | 0.860103 | 2.607497e-63 | -8.615850e-47 |
| Msa0680150 | Msa0929870 | 0.836420 | 9.459615e-57 | -8.615850e-47 |
| Msa0680150 | Msa0930330 | 0.802713 | 4.923625e-49 | -8.615850e-47 |
| Msa0680150 | Msa0931480 | 0.832593 | 8.650361e-56 | -8.615850e-47 |
| Msa0680150 | Msa0937550 | 0.865807 | 4.517319e-65 | -8.615850e-47 |
| Msa0680150 | Msa0938430 | 0.836674 | 8.150261e-57 | -8.615850e-47 |
| Msa0680150 | Msa0941960 | 0.818141 | 2.288253e-52 | -8.615850e-47 |
| Msa0680150 | Msa0944760 | 0.801672 | 8.063747e-49 | -8.615850e-47 |
| Msa0680150 | Msa0951460 | 0.804005 | 2.657941e-49 | -8.615850e-47 |
| Msa0680150 | Msa0951960 | 0.810907 | 9.128396e-51 | -8.615850e-47 |
| Msa0680150 | Msa0974750 | 0.864246 | 1.396357e-64 | -8.615850e-47 |
| Msa0680150 | Msa0975580 | 0.812949 | 3.277326e-51 | -8.615850e-47 |
| Msa0680150 | Msa0996080 | 0.802568 | 5.273862e-49 | -8.615850e-47 |
| Msa0680150 | Msa0999300 | 0.817458 | 3.263727e-52 | -8.615850e-47 |
| Msa0680150 | Msa1004500 | 0.820227 | 7.666221e-53 | -8.615850e-47 |
| Msa0680150 | Msa1004520 | 0.815948 | 7.116100e-52 | -8.615850e-47 |
| Msa0680150 | Msa1006860 | 0.813188 | 2.904939e-51 | -8.615850e-47 |
| Msa0680150 | Msa1007350 | 0.807328 | 5.332559e-50 | -8.615850e-47 |
| Msa0680150 | Msa1014270 | 0.851295 | 9.743629e-61 | -8.615850e-47 |
| Msa0680150 | Msa1022650 | 0.811487 | 6.830167e-51 | -8.615850e-47 |
| Msa0680150 | Msa1032450 | 0.830578 | 2.714453e-55 | -8.615850e-47 |
| Msa0680150 | Msa1037890 | 0.825704 | 4.053957e-54 | -8.615850e-47 |
| Msa0680150 | Msa1037900 | 0.858446 | 8.190268e-63 | -8.615850e-47 |
| Msa0680150 | Msa1037910 | 0.828390 | 9.230852e-55 | -8.615850e-47 |
| Msa0680150 | Msa1037920 | 0.819595 | 1.069546e-52 | -8.615850e-47 |
| Msa0680150 | Msa1041530 | 0.889981 | 1.487387e-73 | -8.615850e-47 |
| Msa0680150 | Msa1045780 | 0.808884 | 2.487363e-50 | -8.615850e-47 |
| Msa0680150 | Msa1045880 | 0.806717 | 7.181709e-50 | -8.615850e-47 |
| Msa0680150 | Msa1045970 | 0.807985 | 3.868561e-50 | -8.615850e-47 |
| Msa0680150 | Msa1046870 | 0.821766 | 3.390557e-53 | -8.615850e-47 |
| Msa0680150 | Msa1048710 | 0.805291 | 1.433173e-49 | -8.615850e-47 |
| Msa0680150 | Msa1055260 | 0.823616 | 1.258153e-53 | -8.615850e-47 |
| Msa0680150 | Msa1055280 | 0.818350 | 2.052002e-52 | -8.615850e-47 |
| Msa0680150 | Msa1061500 | 0.813364 | 2.656999e-51 | -8.615850e-47 |
| Msa0680150 | Msa1070420 | 0.803658 | 3.138647e-49 | -8.615850e-47 |
| Msa0680150 | Msa1081570 | 0.876986 | 9.020284e-69 | -8.615850e-47 |
| Msa0680150 | Msa1088860 | 0.805310 | 1.419675e-49 | -8.615850e-47 |
| Msa0680150 | Msa1123880 | 0.838429 | 2.890927e-57 | -8.615850e-47 |
| Msa0680150 | Msa1127140 | 0.883948 | 2.912360e-71 | -8.615850e-47 |
| Msa0680150 | Msa1129950 | 0.821375 | 4.175341e-53 | -8.615850e-47 |
| Msa0680150 | Msa1129960 | 0.863320 | 2.707521e-64 | -8.615850e-47 |
| Msa0680150 | Msa1129970 | 0.831139 | 1.977089e-55 | -8.615850e-47 |
| Msa0680150 | Msa1129980 | 0.815961 | 7.068801e-52 | -8.615850e-47 |
| Msa0680150 | Msa1130010 | 0.837408 | 5.289450e-57 | -8.615850e-47 |
| Msa0680150 | Msa1134400 | 0.830786 | 2.413590e-55 | -8.615850e-47 |
| Msa0680150 | Msa1135870 | 0.818186 | 2.235730e-52 | -8.615850e-47 |
| Msa0680150 | Msa1145020 | 0.846884 | 1.641113e-59 | -8.615850e-47 |
| Msa0680150 | Msa1166400 | 0.872484 | 3.070950e-67 | -8.615850e-47 |
| Msa0680150 | Msa1169710 | 0.804804 | 1.811678e-49 | -8.615850e-47 |
| Msa0680150 | Msa1169990 | 0.816490 | 5.382504e-52 | -8.615850e-47 |
| Msa0680150 | Msa1176160 | 0.866020 | 3.867165e-65 | -8.615850e-47 |
| Msa0680150 | Msa1178160 | 0.812199 | 4.781466e-51 | -8.615850e-47 |
| Msa0680150 | Msa1200920 | 0.814936 | 1.195225e-51 | -8.615850e-47 |
| Msa0680150 | Msa1201110 | 0.818067 | 2.378824e-52 | -8.615850e-47 |
| Msa0680150 | Msa1201160 | 0.845514 | 3.872324e-59 | -8.615850e-47 |
| Msa0680150 | Msa1227950 | 0.820083 | 8.270614e-53 | -8.615850e-47 |
| Msa0680150 | Msa1227970 | 0.804045 | 2.608615e-49 | -8.615850e-47 |
| Msa0680150 | Msa1228610 | 0.833343 | 5.632385e-56 | -8.615850e-47 |
| Msa0680150 | Msa1272330 | 0.803986 | 2.683080e-49 | -8.615850e-47 |
| Msa0680150 | Msa1277400 | 0.824435 | 8.084200e-54 | -8.615850e-47 |
| Msa0680150 | Msa1281720 | 0.814856 | 1.244862e-51 | -8.615850e-47 |
| Msa0680150 | Msa1285900 | 0.825624 | 4.235265e-54 | -8.615850e-47 |
| Msa0680150 | Msa1293770 | 0.800206 | 1.606921e-48 | -8.615850e-47 |
| Msa0680150 | Msa1294290 | 0.825274 | 5.124559e-54 | -8.615850e-47 |
| Msa0680150 | Msa1296800 | 0.804426 | 2.172842e-49 | -8.615850e-47 |
| Msa0680150 | Msa1305310 | 0.818334 | 2.069727e-52 | -8.615850e-47 |
| Msa0680150 | Msa1305510 | 0.851813 | 6.951003e-61 | -8.615850e-47 |
| Msa0680150 | Msa1305750 | 0.832290 | 1.028369e-55 | -8.615850e-47 |
| Msa0680150 | Msa1307190 | 0.849248 | 3.653759e-60 | -8.615850e-47 |
| Msa0680150 | Msa1321000 | 0.818700 | 1.709800e-52 | -8.615850e-47 |
| Msa0680150 | Msa1350670 | 0.810511 | 1.111424e-50 | -8.615850e-47 |
| Msa0680150 | Msa1355400 | 0.872133 | 4.017282e-67 | -8.615850e-47 |
| Msa0680150 | Msa1365020 | 0.801578 | 8.429064e-49 | -8.615850e-47 |
| Msa0680150 | Msa1367410 | 0.813939 | 1.985760e-51 | -8.615850e-47 |
| Msa0680150 | Msa1385620 | 0.806963 | 6.373778e-50 | -8.615850e-47 |
| Msa0680150 | Msa1406780 | 0.805262 | 1.453251e-49 | -8.615850e-47 |
| Msa0680150 | Msa1408870 | 0.853025 | 3.137487e-61 | -8.615850e-47 |
| Msa0680150 | Msa1414930 | 0.812072 | 5.094710e-51 | -8.615850e-47 |
| Msa0680150 | Msa1420060 | 0.890916 | 6.391502e-74 | -8.615850e-47 |
| Msa0680150 | Msa1421550 | 0.876766 | 1.075826e-68 | -8.615850e-47 |
| Msa0680150 | Msa1423460 | 0.801352 | 9.377561e-49 | -8.615850e-47 |
| Msa0680150 | Msa1431850 | 0.803959 | 2.718165e-49 | -8.615850e-47 |
| Msa0680150 | Msa1435050 | 0.811194 | 7.908311e-51 | -8.615850e-47 |
| Msa0680150 | Msa1437710 | 0.834127 | 3.587757e-56 | -8.615850e-47 |
| Msa0680150 | Msa1439670 | 0.813368 | 2.652079e-51 | -8.615850e-47 |
| Msa0680150 | Msa1442290 | 0.827644 | 1.395947e-54 | -8.615850e-47 |
| Msa0680150 | Msa1449940 | 0.803491 | 3.398687e-49 | -8.615850e-47 |
| Msa0680150 | Msa1455320 | 0.801963 | 7.026884e-49 | -8.615850e-47 |
| Msa0680150 | Msa1461060 | 0.821307 | 4.327504e-53 | -8.615850e-47 |
| Msa0127440 | Msa0680150 | 0.808970 | 2.383564e-50 | -8.615850e-47 |
| Msa0130010 | Msa0680150 | 0.845119 | 4.954590e-59 | -8.615850e-47 |
| Msa0134040 | Msa0680150 | 0.806210 | 9.187824e-50 | -8.615850e-47 |
| Msa0137150 | Msa0680150 | 0.818315 | 2.089832e-52 | -8.615850e-47 |
| Msa0139900 | Msa0680150 | 0.835887 | 1.291448e-56 | -8.615850e-47 |
| Msa0141600 | Msa0680150 | 0.807438 | 5.054780e-50 | -8.615850e-47 |
| Msa0147560 | Msa0680150 | 0.819257 | 1.277159e-52 | -8.615850e-47 |
| Msa0147600 | Msa0680150 | 0.863333 | 2.682562e-64 | -8.615850e-47 |
| Msa0153420 | Msa0680150 | 0.811704 | 6.128636e-51 | -8.615850e-47 |
| Msa0161100 | Msa0680150 | 0.831246 | 1.860676e-55 | -8.615850e-47 |
| Msa0161210 | Msa0680150 | 0.815903 | 7.282039e-52 | -8.615850e-47 |
| Msa0161680 | Msa0680150 | 0.837229 | 5.878294e-57 | -8.615850e-47 |
| Msa0181090 | Msa0680150 | 0.807347 | 5.284310e-50 | -8.615850e-47 |
| Msa0184990 | Msa0680150 | 0.821008 | 5.072237e-53 | -8.615850e-47 |
| Msa0197230 | Msa0680150 | 0.819449 | 1.154661e-52 | -8.615850e-47 |
| Msa0203010 | Msa0680150 | 0.814909 | 1.211952e-51 | -8.615850e-47 |
| Msa0203020 | Msa0680150 | 0.824552 | 7.587067e-54 | -8.615850e-47 |
| Msa0203030 | Msa0680150 | 0.823803 | 1.137533e-53 | -8.615850e-47 |
| Msa0207180 | Msa0680150 | 0.817615 | 3.008468e-52 | -8.615850e-47 |
| Msa0219190 | Msa0680150 | 0.864703 | 1.004400e-64 | -8.615850e-47 |
| Msa0370600 | Msa0680150 | 0.865807 | 4.516333e-65 | -8.615850e-47 |
| Msa0371540 | Msa0680150 | 0.804193 | 2.429647e-49 | -8.615850e-47 |
| Msa0392420 | Msa0680150 | 0.800549 | 1.367948e-48 | -8.615850e-47 |
| Msa0392490 | Msa0680150 | 0.803136 | 4.026109e-49 | -8.615850e-47 |
| Msa0398590 | Msa0680150 | 0.817478 | 3.229426e-52 | -8.615850e-47 |
| Msa0406000 | Msa0680150 | 0.826217 | 3.062363e-54 | -8.615850e-47 |
| Msa0408630 | Msa0680150 | 0.820266 | 7.512662e-53 | -8.615850e-47 |
| Msa0408640 | Msa0680150 | 0.844758 | 6.198346e-59 | -8.615850e-47 |
| Msa0413930 | Msa0680150 | 0.831738 | 1.408401e-55 | -8.615850e-47 |
| Msa0418200 | Msa0680150 | 0.870347 | 1.562563e-66 | -8.615850e-47 |
| Msa0427690 | Msa0680150 | 0.800296 | 1.540108e-48 | -8.615850e-47 |
| Msa0436500 | Msa0680150 | 0.847166 | 1.373043e-59 | -8.615850e-47 |
| Msa0451400 | Msa0680150 | 0.843442 | 1.397590e-58 | -8.615850e-47 |
| Msa0453520 | Msa0680150 | 0.811410 | 7.098058e-51 | -8.615850e-47 |
| Msa0464540 | Msa0680150 | 0.884238 | 2.273845e-71 | -8.615850e-47 |
| Msa0246690 | Msa0680150 | 0.804337 | 2.267392e-49 | -8.615850e-47 |
| Msa0259720 | Msa0680150 | 0.821968 | 3.045112e-53 | -8.615850e-47 |
| Msa0260970 | Msa0680150 | 0.804541 | 2.055742e-49 | -8.615850e-47 |
| Msa0264600 | Msa0680150 | 0.821394 | 4.132845e-53 | -8.615850e-47 |
| Msa0274780 | Msa0680150 | 0.805372 | 1.378111e-49 | -8.615850e-47 |
| Msa0289890 | Msa0680150 | 0.813518 | 2.457509e-51 | -8.615850e-47 |
| Msa0298240 | Msa0680150 | 0.856119 | 3.990478e-62 | -8.615850e-47 |
| Msa0315480 | Msa0680150 | 0.831166 | 1.947449e-55 | -8.615850e-47 |
| Msa0322840 | Msa0680150 | 0.830350 | 3.085552e-55 | -8.615850e-47 |
| Msa0329620 | Msa0680150 | 0.802558 | 5.300110e-49 | -8.615850e-47 |
| Msa0337850 | Msa0680150 | 0.800117 | 1.675451e-48 | -8.615850e-47 |
| Msa0339990 | Msa0680150 | 0.824049 | 9.964796e-54 | -8.615850e-47 |
| Msa0344570 | Msa0680150 | 0.804023 | 2.635287e-49 | -8.615850e-47 |
| Msa0351770 | Msa0680150 | 0.802410 | 5.684607e-49 | -8.615850e-47 |
| Msa0359250 | Msa0680150 | 0.856087 | 4.078499e-62 | -8.615850e-47 |
| Msa0361250 | Msa0680150 | 0.800808 | 1.211202e-48 | -8.615850e-47 |
| Msa0361260 | Msa0680150 | 0.836561 | 8.706508e-57 | -8.615850e-47 |
| Msa0487570 | Msa0680150 | 0.805276 | 1.443479e-49 | -8.615850e-47 |
| Msa0487630 | Msa0680150 | 0.806494 | 8.006155e-50 | -8.615850e-47 |
| Msa0492190 | Msa0680150 | 0.815400 | 9.426738e-52 | -8.615850e-47 |
| Msa0518520 | Msa0680150 | 0.802187 | 6.317616e-49 | -8.615850e-47 |
| Msa0531630 | Msa0680150 | 0.821149 | 4.706735e-53 | -8.615850e-47 |
| Msa0535040 | Msa0680150 | 0.804349 | 2.254458e-49 | -8.615850e-47 |
| Msa0537270 | Msa0680150 | 0.858255 | 9.341987e-63 | -8.615850e-47 |
| Msa0537920 | Msa0680150 | 0.856438 | 3.217315e-62 | -8.615850e-47 |
| Msa0538060 | Msa0680150 | 0.814675 | 1.365167e-51 | -8.615850e-47 |
| Msa0538220 | Msa0680150 | 0.844315 | 8.158480e-59 | -8.615850e-47 |
| Msa0538570 | Msa0680150 | 0.835165 | 1.966773e-56 | -8.615850e-47 |
| Msa0543850 | Msa0680150 | 0.849747 | 2.652179e-60 | -8.615850e-47 |
| Msa0561510 | Msa0680150 | 0.809657 | 1.697554e-50 | -8.615850e-47 |
| Msa0575250 | Msa0680150 | 0.803867 | 2.839888e-49 | -8.615850e-47 |
| Msa0585730 | Msa0680150 | 0.815400 | 9.428498e-52 | -8.615850e-47 |
| Msa0588340 | Msa0680150 | 0.810769 | 9.777273e-51 | -8.615850e-47 |
| Msa0593710 | Msa0680150 | 0.849287 | 3.562808e-60 | -8.615850e-47 |
| Msa0594090 | Msa0680150 | 0.821622 | 3.661645e-53 | -8.615850e-47 |
| Msa0594390 | Msa0680150 | 0.844033 | 9.713989e-59 | -8.615850e-47 |
| Msa0601110 | Msa0680150 | 0.891428 | 4.007137e-74 | -8.615850e-47 |
| Msa0601120 | Msa0680150 | 0.888286 | 6.752791e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680150 | MtrunA17_Chr4g0026171 | 97.059 | 170 | 5 | 0 | 1 | 170 | 1 | 170 | 1.06e-120 | 337 |
| Msa0680150 | MtrunA17_Chr2g0321621 | 68.605 | 172 | 52 | 2 | 1 | 170 | 38 | 209 | 2.69e-84 | 247 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680150 | AT5G22430.1 | 47.134 | 157 | 81 | 2 | 15 | 170 | 17 | 172 | 1.53e-44 | 145 |
| Msa0680150 | AT2G27385.2 | 44.578 | 166 | 83 | 3 | 5 | 170 | 6 | 162 | 6.30e-41 | 135 |
| Msa0680150 | AT2G27385.1 | 44.578 | 166 | 83 | 3 | 5 | 170 | 17 | 173 | 1.05e-40 | 135 |
| Msa0680150 | AT2G27385.3 | 44.578 | 166 | 83 | 3 | 5 | 170 | 17 | 173 | 1.05e-40 | 135 |
Find 36 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCTTACAATTTGTGTTT+TGG | 0.164797 | 4_4:+39043184 | None:intergenic |
| CAAGTTTCACAAGTTATTAA+AGG | 0.220047 | 4_4:-39043264 | Msa0680150:CDS |
| TGAACACACATGATTAATTA+AGG | 0.275899 | 4_4:+39043057 | None:intergenic |
| ATCAGCTTGTGAAATTGTTC+AGG | 0.288968 | 4_4:-39044288 | Msa0680150:CDS |
| AACTGTTTGGCAAAACTTCT+TGG | 0.296592 | 4_4:-39043321 | Msa0680150:CDS |
| CAAAGGAAGATCAATAGTTT+TGG | 0.318080 | 4_4:+39043143 | None:intergenic |
| TCTTCCTTTGCCTCCAGAAT+GGG | 0.330802 | 4_4:-39043130 | Msa0680150:CDS |
| CTAGGTGCCAAACCCCATTC+TGG | 0.344968 | 4_4:+39043117 | None:intergenic |
| TGTAAGGCTGCAAAACCTAT+TGG | 0.353116 | 4_4:-39043171 | Msa0680150:CDS |
| CTTTAATAACTTGTGAAACT+TGG | 0.355048 | 4_4:+39043265 | None:intergenic |
| AATTAAGGTATTCCAATGAT+AGG | 0.380107 | 4_4:+39043072 | None:intergenic |
| CAAAGCAGATATATGTTGTA+TGG | 0.380242 | 4_4:-39042841 | Msa0680150:three_prime_UTR |
| ACTCATAGCTACGATTTATC+TGG | 0.396323 | 4_4:-39044242 | Msa0680150:intron |
| TTTGCCTCCAGAATGGGGTT+TGG | 0.402516 | 4_4:-39043124 | Msa0680150:CDS |
| ATCTTCCTTTGCCTCCAGAA+TGG | 0.404991 | 4_4:-39043131 | Msa0680150:CDS |
| TCTTCCTGTTTCATTGCTCA+TGG | 0.427432 | 4_4:-39044369 | Msa0680150:exon |
| CTTCTGTAGTTGTCATAGCT+AGG | 0.461561 | 4_4:+39043397 | None:intergenic |
| TATGCCATGAGCAATGAAAC+AGG | 0.464694 | 4_4:+39044365 | None:intergenic |
| ATATACTAACATTAGTTCAT+AGG | 0.465580 | 4_4:+39042887 | None:intergenic |
| TAAGGGAAGGTTAACCTTGA+AGG | 0.474567 | 4_4:+39043365 | None:intergenic |
| GAACAATTTCACAAGCTGAT+AGG | 0.484005 | 4_4:+39044291 | None:intergenic |
| TGTTTGGCAAAACTTCTTGG+TGG | 0.491974 | 4_4:-39043318 | Msa0680150:CDS |
| CTTCCTTTGCCTCCAGAATG+GGG | 0.503336 | 4_4:-39043129 | Msa0680150:CDS |
| ATTCCAATGATAGGAACAAA+AGG | 0.504181 | 4_4:+39043081 | None:intergenic |
| AGAAGAAGATGGCTCCTTCA+AGG | 0.515472 | 4_4:-39043379 | Msa0680150:CDS |
| TCAGCTTGTGAAATTGTTCA+GGG | 0.520217 | 4_4:-39044287 | Msa0680150:CDS |
| AGATATATGTTGTATGGGTG+AGG | 0.540735 | 4_4:-39042835 | Msa0680150:three_prime_UTR |
| CATGATGTCAAGAAACTAAG+AGG | 0.549180 | 4_4:+39043210 | None:intergenic |
| AAAGCAGATATATGTTGTAT+GGG | 0.555176 | 4_4:-39042840 | Msa0680150:three_prime_UTR |
| AAACCCCATTCTGGAGGCAA+AGG | 0.556721 | 4_4:+39043126 | None:intergenic |
| AAAGGTACATAATAGCTACT+AGG | 0.564274 | 4_4:+39043099 | None:intergenic |
| ATTAATCATGTGTGTTCAAG+TGG | 0.570855 | 4_4:-39043052 | Msa0680150:three_prime_UTR |
| ATGAATCTTATATGTAGCTG+TGG | 0.599675 | 4_4:-39042950 | Msa0680150:three_prime_UTR |
| ATGACAACTACAGAAGAAGA+TGG | 0.604128 | 4_4:-39043390 | Msa0680150:CDS |
| AAGGTCACAGTGAAATGTGA+AGG | 0.615631 | 4_4:-39043429 | Msa0680150:CDS |
| GGTGCCAAACCCCATTCTGG+AGG | 0.664114 | 4_4:+39043120 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAATAGTTTATTTATTAAT+AGG | - | chr4_4:39043156-39043175 | Msa0680150:CDS | 10.0% |
| !! | CAATAGTTTATTTATTAATA+GGG | - | chr4_4:39043157-39043176 | Msa0680150:CDS | 10.0% |
| !! | TCAATAGTTTATTTATTAAT+AGG | - | chr4_4:39043156-39043175 | Msa0680150:CDS | 10.0% |
| !! | CAATAGTTTATTTATTAATA+GGG | - | chr4_4:39043157-39043176 | Msa0680150:CDS | 10.0% |
| !! | ACTTGAGTAATAAAAATTAT+AGG | - | chr4_4:39044180-39044199 | Msa0680150:intron | 15.0% |
| !! | CTTGAGTAATAAAAATTATA+GGG | - | chr4_4:39044181-39044200 | Msa0680150:intron | 15.0% |
| !! | ACTTGAGTAATAAAAATTAT+AGG | - | chr4_4:39044180-39044199 | Msa0680150:intron | 15.0% |
| !! | CTTGAGTAATAAAAATTATA+GGG | - | chr4_4:39044181-39044200 | Msa0680150:intron | 15.0% |
| !! | GAACATTTAATTAAACTCAA+AGG | + | chr4_4:39043013-39043032 | None:intergenic | 20.0% |
| !! | TAGACATATCATATGTATTA+TGG | - | chr4_4:39043073-39043092 | Msa0680150:exon | 20.0% |
| !! | AATTAGGGACATTAAAAAAT+AGG | + | chr4_4:39043238-39043257 | None:intergenic | 20.0% |
| !!! | TTTTTTAATGTCCCTAATTA+TGG | - | chr4_4:39043239-39043258 | Msa0680150:CDS | 20.0% |
| !!! | TTTTTAATGTCCCTAATTAT+GGG | - | chr4_4:39043240-39043259 | Msa0680150:CDS | 20.0% |
| !! | ATCATGTATGTTTCTTTAAA+AGG | + | chr4_4:39043276-39043295 | None:intergenic | 20.0% |
| !! | TTTGTTAAGAAATACACATT+TGG | - | chr4_4:39043329-39043348 | Msa0680150:CDS | 20.0% |
| !!! | TAATTTTTTAGAAAGAGTGT+GGG | - | chr4_4:39043568-39043587 | Msa0680150:intron | 20.0% |
| !! | TACAAGATGCATATAATATA+TGG | + | chr4_4:39043713-39043732 | None:intergenic | 20.0% |
| !!! | TCAATGATTTTCAGATATTA+AGG | - | chr4_4:39043752-39043771 | Msa0680150:intron | 20.0% |
| !! | ATATACTAACATTAGTTCAT+AGG | + | chr4_4:39044316-39044335 | None:intergenic | 20.0% |
| !! | GAACATTTAATTAAACTCAA+AGG | + | chr4_4:39043013-39043032 | None:intergenic | 20.0% |
| !! | TAGACATATCATATGTATTA+TGG | - | chr4_4:39043073-39043092 | Msa0680150:exon | 20.0% |
| !! | AATTAGGGACATTAAAAAAT+AGG | + | chr4_4:39043238-39043257 | None:intergenic | 20.0% |
| !!! | TTTTTTAATGTCCCTAATTA+TGG | - | chr4_4:39043239-39043258 | Msa0680150:CDS | 20.0% |
| !!! | TTTTTAATGTCCCTAATTAT+GGG | - | chr4_4:39043240-39043259 | Msa0680150:CDS | 20.0% |
| !! | ATCATGTATGTTTCTTTAAA+AGG | + | chr4_4:39043276-39043295 | None:intergenic | 20.0% |
| !! | TTTGTTAAGAAATACACATT+TGG | - | chr4_4:39043329-39043348 | Msa0680150:CDS | 20.0% |
| !!! | TAATTTTTTAGAAAGAGTGT+GGG | - | chr4_4:39043568-39043587 | Msa0680150:intron | 20.0% |
| !! | TACAAGATGCATATAATATA+TGG | + | chr4_4:39043713-39043732 | None:intergenic | 20.0% |
| !!! | TCAATGATTTTCAGATATTA+AGG | - | chr4_4:39043752-39043771 | Msa0680150:intron | 20.0% |
| !! | ATATACTAACATTAGTTCAT+AGG | + | chr4_4:39044316-39044335 | None:intergenic | 20.0% |
| !!! | TAAAAAATAGGAGCTTTGTT+TGG | + | chr4_4:39043226-39043245 | None:intergenic | 25.0% |
| ! | TAAAATTGCTCCCATAATTA+GGG | + | chr4_4:39043253-39043272 | None:intergenic | 25.0% |
| !!! | CAATAGTTTTTGTGTTGTTT+GGG | + | chr4_4:39043308-39043327 | None:intergenic | 25.0% |
| !!! | ACAATAGTTTTTGTGTTGTT+TGG | + | chr4_4:39043309-39043328 | None:intergenic | 25.0% |
| !!! | GTAATTTTTTAGAAAGAGTG+TGG | - | chr4_4:39043567-39043586 | Msa0680150:intron | 25.0% |
| !!! | TGAAACTTGGTTTTGTTTTT+TGG | + | chr4_4:39043925-39043944 | None:intergenic | 25.0% |
| !! | CTTTAATAACTTGTGAAACT+TGG | + | chr4_4:39043938-39043957 | None:intergenic | 25.0% |
| ! | CAAGTTTCACAAGTTATTAA+AGG | - | chr4_4:39043936-39043955 | Msa0680150:intron | 25.0% |
| !! | AATTAAGGTATTCCAATGAT+AGG | + | chr4_4:39044131-39044150 | None:intergenic | 25.0% |
| ! | TGAACACACATGATTAATTA+AGG | + | chr4_4:39044146-39044165 | None:intergenic | 25.0% |
| ! | AAAGCAGATATATGTTGTAT+GGG | - | chr4_4:39044360-39044379 | Msa0680150:exon | 25.0% |
| !!! | TAAAAAATAGGAGCTTTGTT+TGG | + | chr4_4:39043226-39043245 | None:intergenic | 25.0% |
| ! | TAAAATTGCTCCCATAATTA+GGG | + | chr4_4:39043253-39043272 | None:intergenic | 25.0% |
| !!! | CAATAGTTTTTGTGTTGTTT+GGG | + | chr4_4:39043308-39043327 | None:intergenic | 25.0% |
| !!! | ACAATAGTTTTTGTGTTGTT+TGG | + | chr4_4:39043309-39043328 | None:intergenic | 25.0% |
| !!! | GTAATTTTTTAGAAAGAGTG+TGG | - | chr4_4:39043567-39043586 | Msa0680150:intron | 25.0% |
| !!! | TGAAACTTGGTTTTGTTTTT+TGG | + | chr4_4:39043925-39043944 | None:intergenic | 25.0% |
| !! | CTTTAATAACTTGTGAAACT+TGG | + | chr4_4:39043938-39043957 | None:intergenic | 25.0% |
| ! | CAAGTTTCACAAGTTATTAA+AGG | - | chr4_4:39043936-39043955 | Msa0680150:intron | 25.0% |
| !! | AATTAAGGTATTCCAATGAT+AGG | + | chr4_4:39044131-39044150 | None:intergenic | 25.0% |
| ! | TGAACACACATGATTAATTA+AGG | + | chr4_4:39044146-39044165 | None:intergenic | 25.0% |
| ! | AAAGCAGATATATGTTGTAT+GGG | - | chr4_4:39044360-39044379 | Msa0680150:exon | 25.0% |
| TTTATACCAGATGTCTCTTT+CGG | + | chr4_4:39043187-39043206 | None:intergenic | 30.0% | |
| TTGTTTGGAGATTAAAGCTA+GGG | + | chr4_4:39043211-39043230 | None:intergenic | 30.0% | |
| TTTGTTTGGAGATTAAAGCT+AGG | + | chr4_4:39043212-39043231 | None:intergenic | 30.0% | |
| GTAAAATTGCTCCCATAATT+AGG | + | chr4_4:39043254-39043273 | None:intergenic | 30.0% | |
| AAGGCCTTTACAAAGAATTA+CGG | + | chr4_4:39043422-39043441 | None:intergenic | 30.0% | |
| CTAAAAAATTACATGTGTCC+CGG | + | chr4_4:39043559-39043578 | None:intergenic | 30.0% | |
| ! | GAAGTTTTTGTGTTGTCTAA+GGG | + | chr4_4:39043855-39043874 | None:intergenic | 30.0% |
| AAAAACTTCCATGAACTGTT+TGG | - | chr4_4:39043866-39043885 | Msa0680150:intron | 30.0% | |
| !! | TTTTTGGCATAAAGCTGAAT+TGG | + | chr4_4:39043909-39043928 | None:intergenic | 30.0% |
| ! | AGCCTTACAATTTGTGTTTT+GGG | + | chr4_4:39044018-39044037 | None:intergenic | 30.0% |
| !!! | ATAGTTTTGGATGAACCAAT+AGG | + | chr4_4:39044047-39044066 | None:intergenic | 30.0% |
| ! | CAAAGGAAGATCAATAGTTT+TGG | + | chr4_4:39044060-39044079 | None:intergenic | 30.0% |
| ! | AAAGGTACATAATAGCTACT+AGG | + | chr4_4:39044104-39044123 | None:intergenic | 30.0% |
| ATTCCAATGATAGGAACAAA+AGG | + | chr4_4:39044122-39044141 | None:intergenic | 30.0% | |
| ATTAATCATGTGTGTTCAAG+TGG | - | chr4_4:39044148-39044167 | Msa0680150:intron | 30.0% | |
| ATGAATCTTATATGTAGCTG+TGG | - | chr4_4:39044250-39044269 | Msa0680150:CDS | 30.0% | |
| CAAAGCAGATATATGTTGTA+TGG | - | chr4_4:39044359-39044378 | Msa0680150:exon | 30.0% | |
| TTTATACCAGATGTCTCTTT+CGG | + | chr4_4:39043187-39043206 | None:intergenic | 30.0% | |
| TTGTTTGGAGATTAAAGCTA+GGG | + | chr4_4:39043211-39043230 | None:intergenic | 30.0% | |
| TTTGTTTGGAGATTAAAGCT+AGG | + | chr4_4:39043212-39043231 | None:intergenic | 30.0% | |
| GTAAAATTGCTCCCATAATT+AGG | + | chr4_4:39043254-39043273 | None:intergenic | 30.0% | |
| AAGGCCTTTACAAAGAATTA+CGG | + | chr4_4:39043422-39043441 | None:intergenic | 30.0% | |
| CTAAAAAATTACATGTGTCC+CGG | + | chr4_4:39043559-39043578 | None:intergenic | 30.0% | |
| ! | GAAGTTTTTGTGTTGTCTAA+GGG | + | chr4_4:39043855-39043874 | None:intergenic | 30.0% |
| AAAAACTTCCATGAACTGTT+TGG | - | chr4_4:39043866-39043885 | Msa0680150:intron | 30.0% | |
| !! | TTTTTGGCATAAAGCTGAAT+TGG | + | chr4_4:39043909-39043928 | None:intergenic | 30.0% |
| ! | AGCCTTACAATTTGTGTTTT+GGG | + | chr4_4:39044018-39044037 | None:intergenic | 30.0% |
| !!! | ATAGTTTTGGATGAACCAAT+AGG | + | chr4_4:39044047-39044066 | None:intergenic | 30.0% |
| ! | CAAAGGAAGATCAATAGTTT+TGG | + | chr4_4:39044060-39044079 | None:intergenic | 30.0% |
| ! | AAAGGTACATAATAGCTACT+AGG | + | chr4_4:39044104-39044123 | None:intergenic | 30.0% |
| ATTCCAATGATAGGAACAAA+AGG | + | chr4_4:39044122-39044141 | None:intergenic | 30.0% | |
| ATTAATCATGTGTGTTCAAG+TGG | - | chr4_4:39044148-39044167 | Msa0680150:intron | 30.0% | |
| ATGAATCTTATATGTAGCTG+TGG | - | chr4_4:39044250-39044269 | Msa0680150:CDS | 30.0% | |
| CAAAGCAGATATATGTTGTA+TGG | - | chr4_4:39044359-39044378 | Msa0680150:exon | 30.0% | |
| GAACAATTTCACAAGCTGAT+AGG | + | chr4_4:39042912-39042931 | None:intergenic | 35.0% | |
| ATCAGCTTGTGAAATTGTTC+AGG | - | chr4_4:39042912-39042931 | Msa0680150:three_prime_UTR | 35.0% | |
| TCAGCTTGTGAAATTGTTCA+GGG | - | chr4_4:39042913-39042932 | Msa0680150:three_prime_UTR | 35.0% | |
| ACTCATAGCTACGATTTATC+TGG | - | chr4_4:39042958-39042977 | Msa0680150:three_prime_UTR | 35.0% | |
| !!! | AAGCTGTGTTTTTTCCCATA+TGG | - | chr4_4:39043361-39043380 | Msa0680150:CDS | 35.0% |
| !!! | AGCTGTGTTTTTTCCCATAT+GGG | - | chr4_4:39043362-39043381 | Msa0680150:CDS | 35.0% |
| AGGCCTTTACAAAGAATTAC+GGG | + | chr4_4:39043421-39043440 | None:intergenic | 35.0% | |
| ! | TCTCCAAGGTATTATCAACA+AGG | + | chr4_4:39043441-39043460 | None:intergenic | 35.0% |
| TACCTTGGAGATTTCACTTA+TGG | - | chr4_4:39043450-39043469 | Msa0680150:intron | 35.0% | |
| GTATACTTCTAGACACATGT+TGG | + | chr4_4:39043491-39043510 | None:intergenic | 35.0% | |
| AAACGTCTCAAAGTATACTC+CGG | - | chr4_4:39043537-39043556 | Msa0680150:intron | 35.0% | |
| CTTAAGGTTCCAAGAATGTT+GGG | - | chr4_4:39043610-39043629 | Msa0680150:intron | 35.0% | |
| CATCGACCATTTGATACATA+AGG | + | chr4_4:39043640-39043659 | None:intergenic | 35.0% | |
| TTGAAGAACAATGAGAGTCA+TGG | + | chr4_4:39043736-39043755 | None:intergenic | 35.0% | |
| ATGACAACTACAGAAGAAGA+TGG | - | chr4_4:39043810-39043829 | Msa0680150:intron | 35.0% | |
| ! | TTTTTGTGTTGTCTAAGGGA+AGG | + | chr4_4:39043851-39043870 | None:intergenic | 35.0% |
| ! | GGAAGTTTTTGTGTTGTCTA+AGG | + | chr4_4:39043856-39043875 | None:intergenic | 35.0% |
| ! | AAGTTTTGCCAAACAGTTCA+TGG | + | chr4_4:39043877-39043896 | None:intergenic | 35.0% |
| AACTGTTTGGCAAAACTTCT+TGG | - | chr4_4:39043879-39043898 | Msa0680150:intron | 35.0% | |
| CATGATGTCAAGAAACTAAG+AGG | + | chr4_4:39043993-39044012 | None:intergenic | 35.0% | |
| !! | CCTTACAATTTGTGTTTTGG+GGG | + | chr4_4:39044016-39044035 | None:intergenic | 35.0% |
| ! | GCCTTACAATTTGTGTTTTG+GGG | + | chr4_4:39044017-39044036 | None:intergenic | 35.0% |
| ! | CAGCCTTACAATTTGTGTTT+TGG | + | chr4_4:39044019-39044038 | None:intergenic | 35.0% |
| ! | GTACCTTTTGTTCCTATCAT+TGG | - | chr4_4:39044116-39044135 | Msa0680150:intron | 35.0% |
| AGATATATGTTGTATGGGTG+AGG | - | chr4_4:39044365-39044384 | Msa0680150:exon | 35.0% | |
| GAACAATTTCACAAGCTGAT+AGG | + | chr4_4:39042912-39042931 | None:intergenic | 35.0% | |
| ATCAGCTTGTGAAATTGTTC+AGG | - | chr4_4:39042912-39042931 | Msa0680150:three_prime_UTR | 35.0% | |
| TCAGCTTGTGAAATTGTTCA+GGG | - | chr4_4:39042913-39042932 | Msa0680150:three_prime_UTR | 35.0% | |
| ACTCATAGCTACGATTTATC+TGG | - | chr4_4:39042958-39042977 | Msa0680150:three_prime_UTR | 35.0% | |
| !!! | AAGCTGTGTTTTTTCCCATA+TGG | - | chr4_4:39043361-39043380 | Msa0680150:CDS | 35.0% |
| !!! | AGCTGTGTTTTTTCCCATAT+GGG | - | chr4_4:39043362-39043381 | Msa0680150:CDS | 35.0% |
| AGGCCTTTACAAAGAATTAC+GGG | + | chr4_4:39043421-39043440 | None:intergenic | 35.0% | |
| ! | TCTCCAAGGTATTATCAACA+AGG | + | chr4_4:39043441-39043460 | None:intergenic | 35.0% |
| TACCTTGGAGATTTCACTTA+TGG | - | chr4_4:39043450-39043469 | Msa0680150:intron | 35.0% | |
| GTATACTTCTAGACACATGT+TGG | + | chr4_4:39043491-39043510 | None:intergenic | 35.0% | |
| AAACGTCTCAAAGTATACTC+CGG | - | chr4_4:39043537-39043556 | Msa0680150:intron | 35.0% | |
| CTTAAGGTTCCAAGAATGTT+GGG | - | chr4_4:39043610-39043629 | Msa0680150:intron | 35.0% | |
| CATCGACCATTTGATACATA+AGG | + | chr4_4:39043640-39043659 | None:intergenic | 35.0% | |
| TTGAAGAACAATGAGAGTCA+TGG | + | chr4_4:39043736-39043755 | None:intergenic | 35.0% | |
| ATGACAACTACAGAAGAAGA+TGG | - | chr4_4:39043810-39043829 | Msa0680150:intron | 35.0% | |
| ! | TTTTTGTGTTGTCTAAGGGA+AGG | + | chr4_4:39043851-39043870 | None:intergenic | 35.0% |
| ! | GGAAGTTTTTGTGTTGTCTA+AGG | + | chr4_4:39043856-39043875 | None:intergenic | 35.0% |
| ! | AAGTTTTGCCAAACAGTTCA+TGG | + | chr4_4:39043877-39043896 | None:intergenic | 35.0% |
| AACTGTTTGGCAAAACTTCT+TGG | - | chr4_4:39043879-39043898 | Msa0680150:intron | 35.0% | |
| CATGATGTCAAGAAACTAAG+AGG | + | chr4_4:39043993-39044012 | None:intergenic | 35.0% | |
| !! | CCTTACAATTTGTGTTTTGG+GGG | + | chr4_4:39044016-39044035 | None:intergenic | 35.0% |
| ! | GCCTTACAATTTGTGTTTTG+GGG | + | chr4_4:39044017-39044036 | None:intergenic | 35.0% |
| ! | CAGCCTTACAATTTGTGTTT+TGG | + | chr4_4:39044019-39044038 | None:intergenic | 35.0% |
| ! | GTACCTTTTGTTCCTATCAT+TGG | - | chr4_4:39044116-39044135 | Msa0680150:intron | 35.0% |
| AGATATATGTTGTATGGGTG+AGG | - | chr4_4:39044365-39044384 | Msa0680150:exon | 35.0% | |
| TCTTCCTGTTTCATTGCTCA+TGG | - | chr4_4:39042831-39042850 | Msa0680150:three_prime_UTR | 40.0% | |
| TATGCCATGAGCAATGAAAC+AGG | + | chr4_4:39042838-39042857 | None:intergenic | 40.0% | |
| CTTTGTCACTCAGAAGAGTT+CGG | + | chr4_4:39043393-39043412 | None:intergenic | 40.0% | |
| CCTTTACAAAGAATTACGGG+AGG | + | chr4_4:39043418-39043437 | None:intergenic | 40.0% | |
| CCTCCCGTAATTCTTTGTAA+AGG | - | chr4_4:39043415-39043434 | Msa0680150:CDS | 40.0% | |
| !! | AGGCCTTGTTGATAATACCT+TGG | - | chr4_4:39043435-39043454 | Msa0680150:CDS | 40.0% |
| CTCCATAAGTGAAATCTCCA+AGG | + | chr4_4:39043455-39043474 | None:intergenic | 40.0% | |
| ! | CTTCTAGACACATGTTGGTT+GGG | + | chr4_4:39043486-39043505 | None:intergenic | 40.0% |
| ACTTCTAGACACATGTTGGT+TGG | + | chr4_4:39043487-39043506 | None:intergenic | 40.0% | |
| AACGTCTCAAAGTATACTCC+GGG | - | chr4_4:39043538-39043557 | Msa0680150:intron | 40.0% | |
| CCAACATTCTTGGAACCTTA+AGG | + | chr4_4:39043612-39043631 | None:intergenic | 40.0% | |
| CCTTAAGGTTCCAAGAATGT+TGG | - | chr4_4:39043609-39043628 | Msa0680150:intron | 40.0% | |
| GACCATTTGATACATAAGGC+CGG | + | chr4_4:39043636-39043655 | None:intergenic | 40.0% | |
| AAGGTCACAGTGAAATGTGA+AGG | - | chr4_4:39043771-39043790 | Msa0680150:intron | 40.0% | |
| CTTCTGTAGTTGTCATAGCT+AGG | + | chr4_4:39043806-39043825 | None:intergenic | 40.0% | |
| TAAGGGAAGGTTAACCTTGA+AGG | + | chr4_4:39043838-39043857 | None:intergenic | 40.0% | |
| TGTTTGGCAAAACTTCTTGG+TGG | - | chr4_4:39043882-39043901 | Msa0680150:intron | 40.0% | |
| CCCCCAAAACACAAATTGTA+AGG | - | chr4_4:39044013-39044032 | Msa0680150:intron | 40.0% | |
| TGTAAGGCTGCAAAACCTAT+TGG | - | chr4_4:39044029-39044048 | Msa0680150:intron | 40.0% | |
| TCTTCCTGTTTCATTGCTCA+TGG | - | chr4_4:39042831-39042850 | Msa0680150:three_prime_UTR | 40.0% | |
| TATGCCATGAGCAATGAAAC+AGG | + | chr4_4:39042838-39042857 | None:intergenic | 40.0% | |
| CTTTGTCACTCAGAAGAGTT+CGG | + | chr4_4:39043393-39043412 | None:intergenic | 40.0% | |
| CCTTTACAAAGAATTACGGG+AGG | + | chr4_4:39043418-39043437 | None:intergenic | 40.0% | |
| CCTCCCGTAATTCTTTGTAA+AGG | - | chr4_4:39043415-39043434 | Msa0680150:CDS | 40.0% | |
| !! | AGGCCTTGTTGATAATACCT+TGG | - | chr4_4:39043435-39043454 | Msa0680150:CDS | 40.0% |
| CTCCATAAGTGAAATCTCCA+AGG | + | chr4_4:39043455-39043474 | None:intergenic | 40.0% | |
| ! | CTTCTAGACACATGTTGGTT+GGG | + | chr4_4:39043486-39043505 | None:intergenic | 40.0% |
| ACTTCTAGACACATGTTGGT+TGG | + | chr4_4:39043487-39043506 | None:intergenic | 40.0% | |
| AACGTCTCAAAGTATACTCC+GGG | - | chr4_4:39043538-39043557 | Msa0680150:intron | 40.0% | |
| CCAACATTCTTGGAACCTTA+AGG | + | chr4_4:39043612-39043631 | None:intergenic | 40.0% | |
| CCTTAAGGTTCCAAGAATGT+TGG | - | chr4_4:39043609-39043628 | Msa0680150:intron | 40.0% | |
| GACCATTTGATACATAAGGC+CGG | + | chr4_4:39043636-39043655 | None:intergenic | 40.0% | |
| AAGGTCACAGTGAAATGTGA+AGG | - | chr4_4:39043771-39043790 | Msa0680150:intron | 40.0% | |
| CTTCTGTAGTTGTCATAGCT+AGG | + | chr4_4:39043806-39043825 | None:intergenic | 40.0% | |
| TAAGGGAAGGTTAACCTTGA+AGG | + | chr4_4:39043838-39043857 | None:intergenic | 40.0% | |
| TGTTTGGCAAAACTTCTTGG+TGG | - | chr4_4:39043882-39043901 | Msa0680150:intron | 40.0% | |
| CCCCCAAAACACAAATTGTA+AGG | - | chr4_4:39044013-39044032 | Msa0680150:intron | 40.0% | |
| TGTAAGGCTGCAAAACCTAT+TGG | - | chr4_4:39044029-39044048 | Msa0680150:intron | 40.0% | |
| TACCAGATGTCTCTTTCGGT+CGG | + | chr4_4:39043183-39043202 | None:intergenic | 45.0% | |
| GAGTTCGGATGTACCCATAT+GGG | + | chr4_4:39043378-39043397 | None:intergenic | 45.0% | |
| AGAGTTCGGATGTACCCATA+TGG | + | chr4_4:39043379-39043398 | None:intergenic | 45.0% | |
| AAAGAAGCTCGCTTGCCTTA+AGG | - | chr4_4:39043594-39043613 | Msa0680150:intron | 45.0% | |
| AGAAGAAGATGGCTCCTTCA+AGG | - | chr4_4:39043821-39043840 | Msa0680150:intron | 45.0% | |
| ATCTTCCTTTGCCTCCAGAA+TGG | - | chr4_4:39044069-39044088 | Msa0680150:intron | 45.0% | |
| TCTTCCTTTGCCTCCAGAAT+GGG | - | chr4_4:39044070-39044089 | Msa0680150:intron | 45.0% | |
| TACCAGATGTCTCTTTCGGT+CGG | + | chr4_4:39043183-39043202 | None:intergenic | 45.0% | |
| GAGTTCGGATGTACCCATAT+GGG | + | chr4_4:39043378-39043397 | None:intergenic | 45.0% | |
| AGAGTTCGGATGTACCCATA+TGG | + | chr4_4:39043379-39043398 | None:intergenic | 45.0% | |
| AAAGAAGCTCGCTTGCCTTA+AGG | - | chr4_4:39043594-39043613 | Msa0680150:intron | 45.0% | |
| AGAAGAAGATGGCTCCTTCA+AGG | - | chr4_4:39043821-39043840 | Msa0680150:intron | 45.0% | |
| ATCTTCCTTTGCCTCCAGAA+TGG | - | chr4_4:39044069-39044088 | Msa0680150:intron | 45.0% | |
| TCTTCCTTTGCCTCCAGAAT+GGG | - | chr4_4:39044070-39044089 | Msa0680150:intron | 45.0% | |
| AGGTTCCAAGAATGTTGGGC+CGG | - | chr4_4:39043614-39043633 | Msa0680150:intron | 50.0% | |
| ! | GGCCGGCCTTATGTATCAAA+TGG | - | chr4_4:39043631-39043650 | Msa0680150:intron | 50.0% |
| CTTCCTTTGCCTCCAGAATG+GGG | - | chr4_4:39044071-39044090 | Msa0680150:intron | 50.0% | |
| ! | AAACCCCATTCTGGAGGCAA+AGG | + | chr4_4:39044077-39044096 | None:intergenic | 50.0% |
| TTTGCCTCCAGAATGGGGTT+TGG | - | chr4_4:39044076-39044095 | Msa0680150:intron | 50.0% | |
| AGGTTCCAAGAATGTTGGGC+CGG | - | chr4_4:39043614-39043633 | Msa0680150:intron | 50.0% | |
| ! | GGCCGGCCTTATGTATCAAA+TGG | - | chr4_4:39043631-39043650 | Msa0680150:intron | 50.0% |
| CTTCCTTTGCCTCCAGAATG+GGG | - | chr4_4:39044071-39044090 | Msa0680150:intron | 50.0% | |
| ! | AAACCCCATTCTGGAGGCAA+AGG | + | chr4_4:39044077-39044096 | None:intergenic | 50.0% |
| TTTGCCTCCAGAATGGGGTT+TGG | - | chr4_4:39044076-39044095 | Msa0680150:intron | 50.0% | |
| TAAGGCCGGCCCAACATTCT+TGG | + | chr4_4:39043622-39043641 | None:intergenic | 55.0% | |
| CTAGGTGCCAAACCCCATTC+TGG | + | chr4_4:39044086-39044105 | None:intergenic | 55.0% | |
| TAAGGCCGGCCCAACATTCT+TGG | + | chr4_4:39043622-39043641 | None:intergenic | 55.0% | |
| CTAGGTGCCAAACCCCATTC+TGG | + | chr4_4:39044086-39044105 | None:intergenic | 55.0% | |
| GGCCGACCGAAAGAGACATC+TGG | - | chr4_4:39043178-39043197 | Msa0680150:CDS | 60.0% | |
| GGTGCCAAACCCCATTCTGG+AGG | + | chr4_4:39044083-39044102 | None:intergenic | 60.0% | |
| GGCCGACCGAAAGAGACATC+TGG | - | chr4_4:39043178-39043197 | Msa0680150:CDS | 60.0% | |
| GGTGCCAAACCCCATTCTGG+AGG | + | chr4_4:39044083-39044102 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 39042804 | 39044418 | 39042804 | ID=Msa0680150;Name=Msa0680150 |
| chr4_4 | mRNA | 39042804 | 39044418 | 39042804 | ID=Msa0680150-mRNA-1;Parent=Msa0680150;Name=Msa0680150-mRNA-1;_AED=0.00;_eAED=0.00;_QI=46|1|1|1|1|1|2|270|170 |
| chr4_4 | exon | 39042804 | 39043456 | 39042804 | ID=Msa0680150-mRNA-1:exon:9193;Parent=Msa0680150-mRNA-1 |
| chr4_4 | exon | 39044243 | 39044418 | 39044243 | ID=Msa0680150-mRNA-1:exon:9192;Parent=Msa0680150-mRNA-1 |
| chr4_4 | five_prime_UTR | 39044373 | 39044418 | 39044373 | ID=Msa0680150-mRNA-1:five_prime_utr;Parent=Msa0680150-mRNA-1 |
| chr4_4 | CDS | 39044243 | 39044372 | 39044243 | ID=Msa0680150-mRNA-1:cds;Parent=Msa0680150-mRNA-1 |
| chr4_4 | CDS | 39043074 | 39043456 | 39043074 | ID=Msa0680150-mRNA-1:cds;Parent=Msa0680150-mRNA-1 |
| chr4_4 | three_prime_UTR | 39042804 | 39043073 | 39042804 | ID=Msa0680150-mRNA-1:three_prime_utr;Parent=Msa0680150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
