Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720040 | XP_003612811.1 | 98.130 | 802 | 14 | 1 | 1 | 802 | 1 | 801 | 0.0 | 1642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720040 | sp|A2ZAI7|ROC3_ORYSI | 54.063 | 886 | 309 | 25 | 1 | 797 | 4 | 880 | 0.0 | 879 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720040 | G7KCC4 | 98.130 | 802 | 14 | 1 | 1 | 802 | 1 | 801 | 0.0 | 1642 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0720040 | TF | HB-HD-ZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005050 | Msa0720040 | 0.815108 | 1.094547e-51 | -8.615850e-47 |
| Msa0019600 | Msa0720040 | 0.804870 | 1.755624e-49 | -8.615850e-47 |
| Msa0050040 | Msa0720040 | 0.807815 | 4.203599e-50 | -8.615850e-47 |
| Msa0053110 | Msa0720040 | 0.814842 | 1.253773e-51 | -8.615850e-47 |
| Msa0098440 | Msa0720040 | 0.825280 | 5.108929e-54 | -8.615850e-47 |
| Msa0102990 | Msa0720040 | 0.808239 | 3.415317e-50 | -8.615850e-47 |
| Msa0103000 | Msa0720040 | 0.803089 | 4.117564e-49 | -8.615850e-47 |
| Msa0110970 | Msa0720040 | 0.825126 | 5.556467e-54 | -8.615850e-47 |
| Msa0625890 | Msa0720040 | 0.817164 | 3.801363e-52 | -8.615850e-47 |
| Msa0641250 | Msa0720040 | 0.810322 | 1.221043e-50 | -8.615850e-47 |
| Msa0641620 | Msa0720040 | 0.804655 | 1.946474e-49 | -8.615850e-47 |
| Msa0663590 | Msa0720040 | 0.816576 | 5.149510e-52 | -8.615850e-47 |
| Msa0663680 | Msa0720040 | 0.814189 | 1.748505e-51 | -8.615850e-47 |
| Msa0669840 | Msa0720040 | 0.820197 | 7.789176e-53 | -8.615850e-47 |
| Msa0678890 | Msa0720040 | 0.801920 | 7.168840e-49 | -8.615850e-47 |
| Msa0680150 | Msa0720040 | 0.812655 | 3.801273e-51 | -8.615850e-47 |
| Msa0688500 | Msa0720040 | 0.800722 | 1.261488e-48 | -8.615850e-47 |
| Msa0707220 | Msa0720040 | 0.816655 | 4.943457e-52 | -8.615850e-47 |
| Msa0720040 | Msa0741900 | 0.823885 | 1.088436e-53 | -8.615850e-47 |
| Msa0720040 | Msa0747780 | 0.824685 | 7.060680e-54 | -8.615850e-47 |
| Msa0720040 | Msa0761580 | 0.826291 | 2.940039e-54 | -8.615850e-47 |
| Msa0720040 | Msa0763190 | 0.813238 | 2.832234e-51 | -8.615850e-47 |
| Msa0720040 | Msa0802840 | 0.823766 | 1.160690e-53 | -8.615850e-47 |
| Msa0720040 | Msa0822990 | 0.822114 | 2.817199e-53 | -8.615850e-47 |
| Msa0720040 | Msa0841320 | 0.842711 | 2.187796e-58 | -8.615850e-47 |
| Msa0720040 | Msa0844560 | 0.807317 | 5.362327e-50 | -8.615850e-47 |
| Msa0720040 | Msa0862100 | 0.840378 | 9.013938e-58 | -8.615850e-47 |
| Msa0720040 | Msa0867350 | 0.834840 | 2.375054e-56 | -8.615850e-47 |
| Msa0720040 | Msa0872310 | 0.857976 | 1.130274e-62 | -8.615850e-47 |
| Msa0720040 | Msa0873190 | 0.816814 | 4.555083e-52 | -8.615850e-47 |
| Msa0720040 | Msa0885060 | 0.808095 | 3.665359e-50 | -8.615850e-47 |
| Msa0720040 | Msa0896970 | 0.819355 | 1.213386e-52 | -8.615850e-47 |
| Msa0720040 | Msa0898730 | 0.836854 | 7.328695e-57 | -8.615850e-47 |
| Msa0720040 | Msa0905550 | 0.836280 | 1.026522e-56 | -8.615850e-47 |
| Msa0720040 | Msa0930780 | 0.801409 | 9.126920e-49 | -8.615850e-47 |
| Msa0720040 | Msa0936340 | 0.818520 | 1.878214e-52 | -8.615850e-47 |
| Msa0720040 | Msa0937550 | 0.826336 | 2.868901e-54 | -8.615850e-47 |
| Msa0720040 | Msa0941960 | 0.808388 | 3.173992e-50 | -8.615850e-47 |
| Msa0720040 | Msa0951460 | 0.802991 | 4.312969e-49 | -8.615850e-47 |
| Msa0720040 | Msa0951960 | 0.803996 | 2.669421e-49 | -8.615850e-47 |
| Msa0720040 | Msa0974750 | 0.806362 | 8.535971e-50 | -8.615850e-47 |
| Msa0720040 | Msa0999300 | 0.810543 | 1.093934e-50 | -8.615850e-47 |
| Msa0720040 | Msa1012810 | 0.812877 | 3.397766e-51 | -8.615850e-47 |
| Msa0720040 | Msa1014270 | 0.806709 | 7.212449e-50 | -8.615850e-47 |
| Msa0720040 | Msa1037900 | 0.823942 | 1.055770e-53 | -8.615850e-47 |
| Msa0720040 | Msa1037910 | 0.835273 | 1.847417e-56 | -8.615850e-47 |
| Msa0720040 | Msa1037920 | 0.831024 | 2.109669e-55 | -8.615850e-47 |
| Msa0720040 | Msa1041530 | 0.861719 | 8.421189e-64 | -8.615850e-47 |
| Msa0720040 | Msa1042670 | 0.812337 | 4.460847e-51 | -8.615850e-47 |
| Msa0720040 | Msa1055260 | 0.811845 | 5.710510e-51 | -8.615850e-47 |
| Msa0720040 | Msa1055280 | 0.820342 | 7.216589e-53 | -8.615850e-47 |
| Msa0720040 | Msa1061500 | 0.817671 | 2.921619e-52 | -8.615850e-47 |
| Msa0720040 | Msa1081570 | 0.860762 | 1.647984e-63 | -8.615850e-47 |
| Msa0720040 | Msa1123880 | 0.850325 | 1.826553e-60 | -8.615850e-47 |
| Msa0720040 | Msa1127140 | 0.866024 | 3.857159e-65 | -8.615850e-47 |
| Msa0720040 | Msa1127950 | 0.805827 | 1.106163e-49 | -8.615850e-47 |
| Msa0720040 | Msa1129960 | 0.832359 | 9.889961e-56 | -8.615850e-47 |
| Msa0720040 | Msa1129970 | 0.841769 | 3.887116e-58 | -8.615850e-47 |
| Msa0720040 | Msa1129980 | 0.818306 | 2.100177e-52 | -8.615850e-47 |
| Msa0720040 | Msa1139810 | 0.806838 | 6.773549e-50 | -8.615850e-47 |
| Msa0720040 | Msa1166400 | 0.862607 | 4.495028e-64 | -8.615850e-47 |
| Msa0720040 | Msa1169710 | 0.803681 | 3.104246e-49 | -8.615850e-47 |
| Msa0720040 | Msa1169990 | 0.822141 | 2.776323e-53 | -8.615850e-47 |
| Msa0720040 | Msa1176160 | 0.827807 | 1.275497e-54 | -8.615850e-47 |
| Msa0720040 | Msa1201160 | 0.807614 | 4.638314e-50 | -8.615850e-47 |
| Msa0720040 | Msa1228610 | 0.834637 | 2.671903e-56 | -8.615850e-47 |
| Msa0720040 | Msa1233560 | 0.803720 | 3.046951e-49 | -8.615850e-47 |
| Msa0720040 | Msa1305510 | 0.801909 | 7.209502e-49 | -8.615850e-47 |
| Msa0720040 | Msa1307190 | 0.816742 | 4.726541e-52 | -8.615850e-47 |
| Msa0720040 | Msa1336780 | 0.803084 | 4.127089e-49 | -8.615850e-47 |
| Msa0720040 | Msa1351760 | 0.804390 | 2.210612e-49 | -8.615850e-47 |
| Msa0720040 | Msa1355400 | 0.835862 | 1.310225e-56 | -8.615850e-47 |
| Msa0720040 | Msa1374550 | 0.832379 | 9.779115e-56 | -8.615850e-47 |
| Msa0720040 | Msa1414930 | 0.837759 | 4.299741e-57 | -8.615850e-47 |
| Msa0720040 | Msa1420060 | 0.852251 | 5.217547e-61 | -8.615850e-47 |
| Msa0720040 | Msa1421550 | 0.842726 | 2.168483e-58 | -8.615850e-47 |
| Msa0130570 | Msa0720040 | 0.806650 | 7.422224e-50 | -8.615850e-47 |
| Msa0147560 | Msa0720040 | 0.817975 | 2.495186e-52 | -8.615850e-47 |
| Msa0194280 | Msa0720040 | 0.814401 | 1.569563e-51 | -8.615850e-47 |
| Msa0203030 | Msa0720040 | 0.834371 | 3.115743e-56 | -8.615850e-47 |
| Msa0219190 | Msa0720040 | 0.833980 | 3.905142e-56 | -8.615850e-47 |
| Msa0370600 | Msa0720040 | 0.831457 | 1.651237e-55 | -8.615850e-47 |
| Msa0392420 | Msa0720040 | 0.825731 | 3.995745e-54 | -8.615850e-47 |
| Msa0392460 | Msa0720040 | 0.823498 | 1.340794e-53 | -8.615850e-47 |
| Msa0392490 | Msa0720040 | 0.824525 | 7.698039e-54 | -8.615850e-47 |
| Msa0406000 | Msa0720040 | 0.808751 | 2.655354e-50 | -8.615850e-47 |
| Msa0418200 | Msa0720040 | 0.838677 | 2.494090e-57 | -8.615850e-47 |
| Msa0436500 | Msa0720040 | 0.826952 | 2.044625e-54 | -8.615850e-47 |
| Msa0451400 | Msa0720040 | 0.816931 | 4.286768e-52 | -8.615850e-47 |
| Msa0461720 | Msa0720040 | 0.810399 | 1.175093e-50 | -8.615850e-47 |
| Msa0464540 | Msa0720040 | 0.816524 | 5.291172e-52 | -8.615850e-47 |
| Msa0239570 | Msa0720040 | 0.810086 | 1.372795e-50 | -8.615850e-47 |
| Msa0274290 | Msa0720040 | 0.818122 | 2.311720e-52 | -8.615850e-47 |
| Msa0298240 | Msa0720040 | 0.834439 | 2.996161e-56 | -8.615850e-47 |
| Msa0308830 | Msa0720040 | 0.803731 | 3.031371e-49 | -8.615850e-47 |
| Msa0317280 | Msa0720040 | 0.812554 | 4.000016e-51 | -8.615850e-47 |
| Msa0344570 | Msa0720040 | 0.819623 | 1.053656e-52 | -8.615850e-47 |
| Msa0359250 | Msa0720040 | 0.822722 | 2.034165e-53 | -8.615850e-47 |
| Msa0487570 | Msa0720040 | 0.825491 | 4.554943e-54 | -8.615850e-47 |
| Msa0487630 | Msa0720040 | 0.828752 | 7.549209e-55 | -8.615850e-47 |
| Msa0492190 | Msa0720040 | 0.800512 | 1.391985e-48 | -8.615850e-47 |
| Msa0527550 | Msa0720040 | 0.800398 | 1.468579e-48 | -8.615850e-47 |
| Msa0535040 | Msa0720040 | 0.817990 | 2.475045e-52 | -8.615850e-47 |
| Msa0537920 | Msa0720040 | 0.828257 | 9.943290e-55 | -8.615850e-47 |
| Msa0538060 | Msa0720040 | 0.848641 | 5.385136e-60 | -8.615850e-47 |
| Msa0538220 | Msa0720040 | 0.827923 | 1.196289e-54 | -8.615850e-47 |
| Msa0543850 | Msa0720040 | 0.807870 | 4.091354e-50 | -8.615850e-47 |
| Msa0574890 | Msa0720040 | 0.815849 | 7.488936e-52 | -8.615850e-47 |
| Msa0585730 | Msa0720040 | 0.834318 | 3.212879e-56 | -8.615850e-47 |
| Msa0591790 | Msa0720040 | 0.805439 | 1.334083e-49 | -8.615850e-47 |
| Msa0594090 | Msa0720040 | 0.808621 | 2.830184e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720040 | MtrunA17_Chr5g0410711 | 98.130 | 802 | 14 | 1 | 1 | 802 | 1 | 801 | 0.0 | 1642 |
| Msa0720040 | MtrunA17_Chr6g0481041 | 47.139 | 734 | 362 | 12 | 61 | 779 | 1 | 723 | 0.0 | 659 |
| Msa0720040 | MtrunA17_Chr2g0322731 | 44.309 | 738 | 358 | 14 | 57 | 781 | 70 | 767 | 0.0 | 622 |
| Msa0720040 | MtrunA17_Chr4g0024351 | 45.881 | 704 | 338 | 13 | 89 | 781 | 60 | 731 | 0.0 | 616 |
| Msa0720040 | MtrunA17_Chr8g0350321 | 43.876 | 743 | 390 | 16 | 49 | 779 | 79 | 806 | 0.0 | 615 |
| Msa0720040 | MtrunA17_Chr7g0246631 | 44.307 | 729 | 367 | 16 | 66 | 779 | 70 | 774 | 0.0 | 605 |
| Msa0720040 | MtrunA17_Chr1g0203671 | 41.486 | 740 | 403 | 15 | 57 | 779 | 63 | 789 | 0.0 | 572 |
| Msa0720040 | MtrunA17_Chr6g0472471 | 41.520 | 737 | 398 | 17 | 63 | 779 | 42 | 765 | 7.20e-176 | 525 |
| Msa0720040 | MtrunA17_Chr2g0331581 | 38.061 | 691 | 380 | 10 | 93 | 779 | 143 | 789 | 1.26e-160 | 486 |
| Msa0720040 | MtrunA17_Chr7g0224451 | 41.513 | 489 | 208 | 12 | 89 | 565 | 16 | 438 | 4.80e-119 | 367 |
| Msa0720040 | MtrunA17_Chr5g0394111 | 36.346 | 509 | 295 | 12 | 282 | 779 | 156 | 646 | 4.95e-99 | 321 |
| Msa0720040 | MtrunA17_Chr5g0394111 | 45.390 | 141 | 72 | 3 | 71 | 211 | 18 | 153 | 3.74e-27 | 117 |
| Msa0720040 | MtrunA17_Chr2g0292731 | 33.918 | 513 | 302 | 13 | 282 | 779 | 58 | 548 | 7.32e-89 | 291 |
| Msa0720040 | MtrunA17_Chr2g0292741 | 33.072 | 511 | 304 | 14 | 282 | 779 | 50 | 535 | 1.90e-83 | 276 |
| Msa0720040 | MtrunA17_Chr7g0224481 | 40.779 | 385 | 156 | 10 | 89 | 462 | 16 | 339 | 2.52e-81 | 264 |
| Msa0720040 | MtrunA17_Chr7g0224491 | 42.902 | 317 | 155 | 8 | 465 | 779 | 1 | 293 | 1.99e-72 | 239 |
| Msa0720040 | MtrunA17_Chr2g0292761 | 32.847 | 548 | 290 | 22 | 170 | 705 | 3 | 484 | 4.28e-71 | 243 |
| Msa0720040 | MtrunA17_Chr5g0419821 | 50.806 | 124 | 59 | 2 | 88 | 210 | 32 | 154 | 6.42e-34 | 128 |
| Msa0720040 | MtrunA17_Chr2g0319671 | 33.178 | 214 | 126 | 5 | 341 | 553 | 104 | 301 | 5.70e-27 | 112 |
| Msa0720040 | MtrunA17_Chr2g0319691 | 39.837 | 123 | 70 | 2 | 401 | 523 | 1 | 119 | 6.36e-21 | 90.1 |
| Msa0720040 | MtrunA17_Chr2g0304191 | 32.847 | 137 | 80 | 3 | 295 | 425 | 1 | 131 | 1.24e-19 | 85.9 |
| Msa0720040 | MtrunA17_Chr2g0319681 | 27.615 | 239 | 155 | 5 | 545 | 779 | 1 | 225 | 1.28e-18 | 86.3 |
| Msa0720040 | MtrunA17_Chr7g0224431 | 31.902 | 163 | 68 | 2 | 310 | 472 | 1 | 120 | 1.48e-17 | 79.7 |
| Msa0720040 | MtrunA17_Chr1g0205981 | 33.846 | 195 | 97 | 8 | 144 | 329 | 1 | 172 | 7.95e-17 | 79.7 |
| Msa0720040 | MtrunA17_Chr2g0319701 | 28.151 | 238 | 153 | 8 | 545 | 779 | 1 | 223 | 3.03e-15 | 76.3 |
| Msa0720040 | MtrunA17_Chr7g0224461 | 38.333 | 120 | 67 | 2 | 660 | 779 | 2 | 114 | 4.81e-14 | 69.3 |
| Msa0720040 | MtrunA17_Chr4g0055851 | 35.115 | 131 | 84 | 1 | 48 | 177 | 75 | 205 | 7.91e-14 | 72.8 |
| Msa0720040 | MtrunA17_Chr7g0265521 | 36.937 | 111 | 64 | 2 | 77 | 184 | 51 | 158 | 2.13e-11 | 64.7 |
| Msa0720040 | MtrunA17_Chr4g0028991 | 34.694 | 98 | 56 | 2 | 92 | 181 | 28 | 125 | 2.24e-11 | 67.8 |
| Msa0720040 | MtrunA17_Chr7g0258831 | 31.250 | 128 | 85 | 1 | 64 | 188 | 129 | 256 | 6.11e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720040 | AT5G46880.3 | 55.475 | 831 | 286 | 21 | 8 | 779 | 1 | 806 | 0.0 | 843 |
| Msa0720040 | AT5G46880.1 | 55.475 | 831 | 286 | 21 | 8 | 779 | 1 | 806 | 0.0 | 843 |
| Msa0720040 | AT5G46880.2 | 55.475 | 831 | 286 | 21 | 8 | 779 | 1 | 806 | 0.0 | 843 |
| Msa0720040 | AT4G17710.1 | 48.843 | 778 | 303 | 16 | 13 | 779 | 10 | 703 | 0.0 | 667 |
| Msa0720040 | AT4G04890.2 | 44.329 | 767 | 384 | 14 | 34 | 790 | 7 | 740 | 0.0 | 649 |
| Msa0720040 | AT4G04890.1 | 44.329 | 767 | 384 | 14 | 34 | 790 | 7 | 740 | 0.0 | 649 |
| Msa0720040 | AT1G05230.8 | 44.912 | 737 | 349 | 16 | 51 | 779 | 29 | 716 | 0.0 | 631 |
| Msa0720040 | AT1G05230.4 | 44.912 | 737 | 349 | 16 | 51 | 779 | 29 | 716 | 0.0 | 631 |
| Msa0720040 | AT1G05230.9 | 44.912 | 737 | 349 | 16 | 51 | 779 | 29 | 716 | 0.0 | 631 |
| Msa0720040 | AT1G05230.10 | 44.912 | 737 | 349 | 16 | 51 | 779 | 29 | 716 | 0.0 | 631 |
| Msa0720040 | AT1G05230.7 | 44.912 | 737 | 349 | 16 | 51 | 779 | 29 | 716 | 0.0 | 631 |
| Msa0720040 | AT1G05230.11 | 44.912 | 737 | 349 | 16 | 51 | 779 | 29 | 716 | 0.0 | 631 |
| Msa0720040 | AT1G05230.2 | 44.912 | 737 | 349 | 16 | 51 | 779 | 29 | 716 | 0.0 | 631 |
| Msa0720040 | AT1G05230.6 | 44.912 | 737 | 349 | 16 | 51 | 779 | 29 | 716 | 0.0 | 631 |
| Msa0720040 | AT1G05230.5 | 44.912 | 737 | 349 | 16 | 51 | 779 | 29 | 716 | 0.0 | 631 |
| Msa0720040 | AT1G05230.1 | 44.912 | 737 | 349 | 16 | 51 | 779 | 29 | 716 | 0.0 | 631 |
| Msa0720040 | AT1G05230.3 | 44.640 | 737 | 349 | 16 | 51 | 779 | 29 | 714 | 0.0 | 627 |
| Msa0720040 | AT4G21750.2 | 43.325 | 764 | 376 | 15 | 55 | 782 | 19 | 761 | 0.0 | 620 |
| Msa0720040 | AT4G21750.1 | 43.325 | 764 | 376 | 15 | 55 | 782 | 19 | 761 | 0.0 | 620 |
| Msa0720040 | AT4G21750.3 | 43.325 | 764 | 376 | 15 | 55 | 782 | 19 | 761 | 0.0 | 620 |
| Msa0720040 | AT4G21750.4 | 43.325 | 764 | 376 | 15 | 55 | 782 | 19 | 761 | 0.0 | 620 |
| Msa0720040 | AT1G73360.1 | 46.348 | 712 | 343 | 15 | 89 | 785 | 32 | 719 | 0.0 | 601 |
| Msa0720040 | AT4G00730.1 | 43.269 | 728 | 378 | 17 | 55 | 779 | 103 | 798 | 0.0 | 576 |
| Msa0720040 | AT1G17920.2 | 44.521 | 721 | 338 | 17 | 75 | 779 | 7 | 681 | 0.0 | 575 |
| Msa0720040 | AT1G17920.1 | 44.521 | 721 | 338 | 17 | 75 | 779 | 7 | 681 | 0.0 | 575 |
| Msa0720040 | AT3G61150.1 | 40.671 | 745 | 388 | 17 | 63 | 779 | 85 | 803 | 0.0 | 555 |
| Msa0720040 | AT1G05230.12 | 46.634 | 609 | 285 | 13 | 51 | 651 | 29 | 605 | 0.0 | 547 |
| Msa0720040 | AT5G52170.3 | 39.130 | 690 | 345 | 17 | 93 | 779 | 61 | 678 | 1.28e-157 | 475 |
| Msa0720040 | AT5G52170.1 | 39.130 | 690 | 345 | 17 | 93 | 779 | 61 | 678 | 1.28e-157 | 475 |
| Msa0720040 | AT5G52170.2 | 38.873 | 692 | 349 | 17 | 93 | 779 | 61 | 683 | 3.30e-157 | 474 |
| Msa0720040 | AT2G32370.1 | 38.429 | 713 | 381 | 15 | 75 | 776 | 52 | 717 | 2.23e-156 | 473 |
| Msa0720040 | AT1G79840.3 | 37.784 | 704 | 363 | 16 | 89 | 779 | 43 | 684 | 1.18e-149 | 454 |
| Msa0720040 | AT1G79840.6 | 37.784 | 704 | 363 | 16 | 89 | 779 | 43 | 684 | 1.18e-149 | 454 |
| Msa0720040 | AT1G79840.1 | 38.210 | 704 | 360 | 17 | 89 | 779 | 101 | 742 | 3.21e-149 | 456 |
| Msa0720040 | AT1G79840.2 | 38.210 | 704 | 360 | 17 | 89 | 779 | 130 | 771 | 2.04e-148 | 454 |
| Msa0720040 | AT3G03260.1 | 35.397 | 743 | 407 | 18 | 61 | 779 | 1 | 694 | 1.41e-137 | 424 |
| Msa0720040 | AT4G00730.2 | 46.809 | 470 | 231 | 11 | 55 | 524 | 103 | 553 | 1.91e-136 | 416 |
| Msa0720040 | AT5G17320.1 | 33.827 | 742 | 425 | 18 | 72 | 779 | 6 | 715 | 4.94e-125 | 392 |
| Msa0720040 | AT1G79840.4 | 38.624 | 567 | 291 | 13 | 89 | 645 | 101 | 620 | 4.46e-123 | 384 |
| Msa0720040 | AT1G34650.1 | 34.247 | 730 | 410 | 24 | 84 | 779 | 12 | 705 | 3.09e-113 | 360 |
| Msa0720040 | AT4G25530.1 | 31.497 | 708 | 415 | 13 | 83 | 779 | 34 | 682 | 4.42e-112 | 357 |
| Msa0720040 | AT3G03260.2 | 36.731 | 569 | 319 | 13 | 61 | 618 | 1 | 539 | 2.50e-111 | 350 |
| Msa0720040 | AT1G79840.5 | 39.683 | 441 | 214 | 10 | 89 | 523 | 101 | 495 | 1.19e-93 | 303 |
| Msa0720040 | AT5G07260.1 | 25.714 | 595 | 347 | 20 | 154 | 736 | 9 | 520 | 4.55e-40 | 156 |
| Msa0720040 | AT5G07260.2 | 25.546 | 595 | 343 | 21 | 154 | 736 | 9 | 515 | 1.41e-39 | 154 |
| Msa0720040 | AT4G26920.1 | 25.000 | 232 | 153 | 10 | 297 | 523 | 74 | 289 | 1.13e-11 | 68.6 |
| Msa0720040 | AT5G60690.1 | 35.714 | 98 | 55 | 2 | 92 | 181 | 25 | 122 | 1.74e-11 | 68.6 |
Find 240 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTATACGCTTCCATTTCT+TGG | 0.178284 | 5_1:-15750179 | None:intergenic |
| AGAGGACCTCCTGCAGTATT+TGG | 0.188290 | 5_1:-15753648 | None:intergenic |
| AATTGTTCCCTCCTCTCTTT+TGG | 0.208692 | 5_1:+15755186 | Msa0720040:three_prime_UTR |
| TTCAGTCTTTGTTTATCATC+TGG | 0.234084 | 5_1:-15750530 | None:intergenic |
| TCCAAGATCTGATATGTTTC+TGG | 0.235454 | 5_1:-15753949 | None:intergenic |
| ATGTATAATGGGACCTGATA+TGG | 0.242844 | 5_1:+15751397 | Msa0720040:CDS |
| AGAGGGTGGTCTCTTATTAA+TGG | 0.264546 | 5_1:+15752653 | Msa0720040:CDS |
| AGAATAGTGACAAGTGAATT+AGG | 0.271863 | 5_1:+15755311 | Msa0720040:three_prime_UTR |
| ATTATAGCTTCAGGTGCTTC+TGG | 0.293148 | 5_1:+15753095 | Msa0720040:CDS |
| CAGATGGATGCACTTTCTAA+TGG | 0.294055 | 5_1:+15754514 | Msa0720040:intron |
| CATAGTTACTAAATATTTGA+TGG | 0.305082 | 5_1:-15753845 | None:intergenic |
| GAGAGGTAAAGAAGAGATAA+TGG | 0.313794 | 5_1:+15750038 | Msa0720040:CDS |
| GGAACTTGCAGCTTCTTCTA+TGG | 0.317436 | 5_1:+15752698 | Msa0720040:CDS |
| CACCACAAGTGGTCATATTA+AGG | 0.319412 | 5_1:-15754150 | None:intergenic |
| CAGTTTCAGAACCTTCTTCA+TGG | 0.328797 | 5_1:+15749468 | Msa0720040:five_prime_UTR |
| ACTGAAACTAAGCCATGATT+TGG | 0.329620 | 5_1:+15750547 | Msa0720040:CDS |
| TTTAAGTATGTGGGGTGTAT+TGG | 0.330391 | 5_1:+15755486 | Msa0720040:three_prime_UTR |
| TTCGGAACGGCGAGAATGAT+AGG | 0.337517 | 5_1:+15752763 | Msa0720040:CDS |
| GCTTGATGAAATTAGCAAAT+AGG | 0.352169 | 5_1:+15754110 | Msa0720040:CDS |
| TTAGTTAAGGTGGTGTGGTT+CGG | 0.354809 | 5_1:+15755704 | Msa0720040:three_prime_UTR |
| TAGTTAAGGTGGTGTGGTTC+GGG | 0.359497 | 5_1:+15755705 | Msa0720040:three_prime_UTR |
| CATGAAGAAGGTTCTGAAAC+TGG | 0.361754 | 5_1:-15749467 | None:intergenic |
| TTGTGGTGGGCCATGTATAA+TGG | 0.362098 | 5_1:+15751385 | Msa0720040:CDS |
| CTCAGGTTGTCTTCTTATCA+TGG | 0.367340 | 5_1:+15754956 | Msa0720040:CDS |
| ATCAAGCTCTTCCGCGCTTC+CGG | 0.368031 | 5_1:-15754094 | None:intergenic |
| ACAATTCATGTTCCCATAGT+TGG | 0.381813 | 5_1:-15755385 | None:intergenic |
| GGTAATTAACTAGAGTAGTA+AGG | 0.382206 | 5_1:+15755409 | Msa0720040:three_prime_UTR |
| AGAAAACCAAAGGTATTATC+TGG | 0.382461 | 5_1:-15755636 | None:intergenic |
| ATACATGGCCCACCACAATT+AGG | 0.390584 | 5_1:-15751380 | None:intergenic |
| ATAATGGATCAAAGTGGTTC+AGG | 0.391002 | 5_1:+15750054 | Msa0720040:CDS |
| TCAGTCTTTGTTTATCATCT+GGG | 0.391749 | 5_1:-15750529 | None:intergenic |
| ACTAACAGCAATTGCTTTGT+TGG | 0.392291 | 5_1:+15755098 | Msa0720040:CDS |
| AGATGGATGCACTTTCTAAT+GGG | 0.399022 | 5_1:+15754515 | Msa0720040:intron |
| ACTGTTCAAATTATAGCTTC+AGG | 0.399428 | 5_1:+15753086 | Msa0720040:CDS |
| AGCGGGGAATTTAAGTATGT+GGG | 0.400996 | 5_1:+15755477 | Msa0720040:three_prime_UTR |
| TGAATGAACCGCTTTGGATT+CGG | 0.406307 | 5_1:+15752745 | Msa0720040:CDS |
| GTGATTCTAACGGTGTCTTC+TGG | 0.415111 | 5_1:-15754202 | None:intergenic |
| CTTGCCCTAGCAACAATTGT+TGG | 0.420980 | 5_1:-15753062 | None:intergenic |
| AACCTTCTTCATGGTCCTGC+TGG | 0.422157 | 5_1:+15749477 | Msa0720040:five_prime_UTR |
| AATTATATGCAGTTTGTTCA+AGG | 0.423365 | 5_1:+15750496 | Msa0720040:intron |
| GAGGACCTCCTGCAGTATTT+GGG | 0.423473 | 5_1:-15753647 | None:intergenic |
| ATCACTCCACTGGGTTGGCC+AGG | 0.423809 | 5_1:-15754244 | None:intergenic |
| GACAAGGAGTGCACACTACT+TGG | 0.425308 | 5_1:-15755153 | None:intergenic |
| CTAACAGCAATTGCTTTGTT+GGG | 0.426498 | 5_1:+15755099 | Msa0720040:CDS |
| ATCTCTTATGCCACCATCAC+TGG | 0.427634 | 5_1:+15752530 | Msa0720040:CDS |
| CAAATTGAAGGTGCTCTTTG+TGG | 0.429451 | 5_1:+15755071 | Msa0720040:CDS |
| TCTTGAAAATGTGAAGGTTC+AGG | 0.429683 | 5_1:-15752633 | None:intergenic |
| TGTACCCTTGAATAGCCATT+TGG | 0.431448 | 5_1:-15753692 | None:intergenic |
| TTACTAAATATTTGATGGAC+AGG | 0.433796 | 5_1:-15753840 | None:intergenic |
| CACTACGGTCGACGTTGATT+CGG | 0.435097 | 5_1:+15754779 | Msa0720040:CDS |
| TATTGCTAACGGATCACATC+CGG | 0.435149 | 5_1:+15754561 | Msa0720040:CDS |
| GATTGCAGTGATACCTTCTC+CGG | 0.435519 | 5_1:+15754075 | Msa0720040:intron |
| TTTGGTGCACAACGTTGGTT+AGG | 0.436385 | 5_1:+15753885 | Msa0720040:CDS |
| AGCGCACCAGATAATACCTT+TGG | 0.438255 | 5_1:+15755630 | Msa0720040:three_prime_UTR |
| AGAAGGGAAATGCAGTTTCC+CGG | 0.438847 | 5_1:-15754580 | None:intergenic |
| AAGACTTTGGTATGAGGATA+AGG | 0.441439 | 5_1:-15754295 | None:intergenic |
| TGATCATCAAAGCCCATATC+AGG | 0.443548 | 5_1:-15751410 | None:intergenic |
| TCAACCCTTTCCTTCTTCCA+TGG | 0.443578 | 5_1:+15749896 | Msa0720040:CDS |
| TGCTCGTCAGATCCAAGAAA+TGG | 0.444102 | 5_1:+15750167 | Msa0720040:CDS |
| TTTAGTAACTATGTGTATAG+TGG | 0.445206 | 5_1:+15753855 | Msa0720040:CDS |
| GTCAAATGAATGAACCGCTT+TGG | 0.446056 | 5_1:+15752739 | Msa0720040:CDS |
| TTTGAACAGAAAGAAGAAGA+AGG | 0.446907 | 5_1:+15750009 | Msa0720040:intron |
| GTTTGAAGAATGAGAACTAT+AGG | 0.449425 | 5_1:+15751327 | Msa0720040:CDS |
| AACCTACATTTATGCGAAGA+AGG | 0.449464 | 5_1:-15754597 | None:intergenic |
| ACTATGGGAACATGAATTGT+AGG | 0.449987 | 5_1:+15755388 | Msa0720040:three_prime_UTR |
| TTAAGCAAAGGAATGAGTTA+AGG | 0.450292 | 5_1:+15752838 | Msa0720040:CDS |
| ATTTCGGTGCATGGTGGCAT+TGG | 0.453644 | 5_1:-15752588 | None:intergenic |
| ATGATGGTGGTGCCATTGTT+TGG | 0.453959 | 5_1:-15752509 | None:intergenic |
| ACAATCATGGACTGCTATAT+CGG | 0.455597 | 5_1:+15754174 | Msa0720040:CDS |
| CATAGGGACAGGAATCATTT+CGG | 0.459457 | 5_1:-15752604 | None:intergenic |
| CTCTTCCGCGCTTCCGGAGA+AGG | 0.460150 | 5_1:-15754088 | None:intergenic |
| GCCAGAAACATATCAGATCT+TGG | 0.461933 | 5_1:+15753948 | Msa0720040:CDS |
| TTCCTTTGCTTAAGATTCAA+AGG | 0.462942 | 5_1:-15752828 | None:intergenic |
| AAATACTGCAGGAGGTCCTC+TGG | 0.464331 | 5_1:+15753650 | Msa0720040:CDS |
| TGTGGTGGGCCATGTATAAT+GGG | 0.465808 | 5_1:+15751386 | Msa0720040:CDS |
| CTGAAACTAAGCCATGATTT+GGG | 0.466763 | 5_1:+15750548 | Msa0720040:CDS |
| GAGCGGGGAATTTAAGTATG+TGG | 0.473137 | 5_1:+15755476 | Msa0720040:three_prime_UTR |
| GAACAAGTTGAAGATAAGTC+AGG | 0.474547 | 5_1:+15750081 | Msa0720040:CDS |
| AACCACGCCAGGTTAAGTTC+TGG | 0.478239 | 5_1:+15750576 | Msa0720040:CDS |
| GTGGTTTCAGTCCCAAATCA+TGG | 0.480470 | 5_1:-15750559 | None:intergenic |
| TGACGAACGCCACAGATCTC+AGG | 0.483891 | 5_1:+15754330 | Msa0720040:CDS |
| GTTTCCAACAATTGTTGCTA+GGG | 0.484748 | 5_1:+15753058 | Msa0720040:CDS |
| GACAGTGTGATGAAATGAAA+GGG | 0.486482 | 5_1:-15749372 | None:intergenic |
| TAGTAATTAACATTGTGAAA+TGG | 0.486893 | 5_1:+15755564 | Msa0720040:three_prime_UTR |
| AATGGCCCAGGTTCCTTCCT+CGG | 0.487016 | 5_1:-15753576 | None:intergenic |
| GAGCACCTTCAATTTGATGC+AGG | 0.487171 | 5_1:-15755064 | None:intergenic |
| TATTATGTATGCAGGTAACA+TGG | 0.487587 | 5_1:+15753790 | Msa0720040:intron |
| ATGGCCTCACTAGTTAGTTA+AGG | 0.487743 | 5_1:+15755691 | Msa0720040:three_prime_UTR |
| TGTATAATGGGACCTGATAT+GGG | 0.487914 | 5_1:+15751398 | Msa0720040:CDS |
| CATCACACTGTCTCTTTGTG+TGG | 0.489404 | 5_1:+15749383 | Msa0720040:five_prime_UTR |
| TGTTTCCAACAATTGTTGCT+AGG | 0.491835 | 5_1:+15753057 | Msa0720040:CDS |
| GTAATTAACTAGAGTAGTAA+GGG | 0.494190 | 5_1:+15755410 | Msa0720040:three_prime_UTR |
| ACATGCCAAATGGCTATTCA+AGG | 0.495938 | 5_1:+15753687 | Msa0720040:CDS |
| AGATGAGAAATCACTTGCTA+TGG | 0.496183 | 5_1:+15752677 | Msa0720040:CDS |
| GAAAATAATTAAATTAGCAA+TGG | 0.496335 | 5_1:-15755363 | None:intergenic |
| CTTTGTTTATCATCTGGGTG+TGG | 0.497200 | 5_1:-15750524 | None:intergenic |
| GAGAGTTGCACAGATCAATC+TGG | 0.500290 | 5_1:+15754741 | Msa0720040:CDS |
| TTGGAGGGTGCACTAGTGGT+TGG | 0.501171 | 5_1:-15755134 | None:intergenic |
| GAAGAAGGAAAGGGTTGAAA+AGG | 0.502627 | 5_1:-15749891 | None:intergenic |
| AATACCCTGCATCAAATTGA+AGG | 0.504038 | 5_1:+15755059 | Msa0720040:CDS |
| GATGTATGTGAGGAGGGTAG+AGG | 0.505862 | 5_1:+15755591 | Msa0720040:three_prime_UTR |
| TCGCCGCAGTTTCAACCACT+TGG | 0.506037 | 5_1:+15754269 | Msa0720040:CDS |
| GTGTATAGTGGAATGGCATT+TGG | 0.507399 | 5_1:+15753867 | Msa0720040:CDS |
| ATTCCAAGTTCTTTCTCCGT+TGG | 0.508575 | 5_1:+15753508 | Msa0720040:CDS |
| TGAAGTTGAAGCTAGAGTTA+TGG | 0.509313 | 5_1:-15749857 | None:intergenic |
| TGGTGCGCTCTTGACTCCCT+CGG | 0.512377 | 5_1:-15755616 | None:intergenic |
| GAGTAGTAAGGGAAGGAACA+AGG | 0.514870 | 5_1:+15755421 | Msa0720040:three_prime_UTR |
| TGCGGCGAGAATCACTCCAC+TGG | 0.516058 | 5_1:-15754254 | None:intergenic |
| TATTACCATGGAAGAAGGAA+AGG | 0.517256 | 5_1:-15749901 | None:intergenic |
| TCTCGTATGATTCGTGATGA+TGG | 0.519461 | 5_1:+15755672 | Msa0720040:three_prime_UTR |
| GGTGCTTCTGGCCATGCAAG+TGG | 0.520606 | 5_1:+15753107 | Msa0720040:CDS |
| TGTCAAGTAATGTCAACAAT+GGG | 0.522321 | 5_1:+15749789 | Msa0720040:CDS |
| CCACTTGTGGTGGACAATCA+TGG | 0.523426 | 5_1:+15754161 | Msa0720040:CDS |
| GAAGGTTCAGGTGGTAACAT+AGG | 0.523574 | 5_1:-15752621 | None:intergenic |
| AGGGTTTATGATAGTGCCAA+TGG | 0.526881 | 5_1:+15754854 | Msa0720040:CDS |
| ATACCAACGGAGAAAGAACT+TGG | 0.527798 | 5_1:-15753511 | None:intergenic |
| ACAACCTGAGTTAGCAGCAT+TGG | 0.530947 | 5_1:-15754943 | None:intergenic |
| TGCAAGTGGGACTCTTCAGC+TGG | 0.531576 | 5_1:+15753121 | Msa0720040:CDS |
| TCAGGTTGTCTTCTTATCAT+GGG | 0.533492 | 5_1:+15754957 | Msa0720040:CDS |
| CTTGTCCACTCATAGCTAGT+TGG | 0.533968 | 5_1:-15754803 | None:intergenic |
| TGAGGAGGGTAGAGGGACCG+AGG | 0.534032 | 5_1:+15755599 | Msa0720040:three_prime_UTR |
| ACTAGGAAAATCACTGAGCC+TGG | 0.535391 | 5_1:+15754226 | Msa0720040:CDS |
| AAAATGCCGAGGAAGGAACC+TGG | 0.536205 | 5_1:+15753570 | Msa0720040:CDS |
| CTACTTGGAGGGTGCACTAG+TGG | 0.538012 | 5_1:-15755138 | None:intergenic |
| ACAGGAATCATTTCGGTGCA+TGG | 0.539238 | 5_1:-15752597 | None:intergenic |
| AGGAAAATCAACAATGGCCC+AGG | 0.539512 | 5_1:-15753588 | None:intergenic |
| GGCATTGGATCAAAGTGCCT+TGG | 0.540308 | 5_1:-15752573 | None:intergenic |
| AGATCAAAGACTTTGGTATG+AGG | 0.540751 | 5_1:-15754301 | None:intergenic |
| GGCCTTTGAATCTTAAGCAA+AGG | 0.541375 | 5_1:+15752826 | Msa0720040:CDS |
| TCAGGTGGTAACATAGGGAC+AGG | 0.544013 | 5_1:-15752615 | None:intergenic |
| TCGGAACGGCGAGAATGATA+GGG | 0.544642 | 5_1:+15752764 | Msa0720040:CDS |
| TGAGAACTATAGGCTACAAT+CGG | 0.544698 | 5_1:+15751337 | Msa0720040:CDS |
| TCATCTGAACAAGGTGTCAC+AGG | 0.545128 | 5_1:+15754897 | Msa0720040:CDS |
| AACTTCGATTTGAAAATGCC+CGG | 0.545308 | 5_1:+15751435 | Msa0720040:CDS |
| GTCATTCAAGACATGCCAAA+TGG | 0.545833 | 5_1:+15753677 | Msa0720040:CDS |
| AGCCTTAATATGACCACTTG+TGG | 0.546867 | 5_1:+15754148 | Msa0720040:CDS |
| ATTCTTATCCCAAATACTGC+AGG | 0.549196 | 5_1:+15753639 | Msa0720040:CDS |
| AAGGAGTGCACACTACTTGG+AGG | 0.551266 | 5_1:-15755150 | None:intergenic |
| TGGGAACTCATTAAATGAAG+TGG | 0.552199 | 5_1:+15754534 | Msa0720040:CDS |
| AAGGTTCAGGTGGTAACATA+GGG | 0.552742 | 5_1:-15752620 | None:intergenic |
| TTTGGGACTGAAACCACGCC+AGG | 0.553427 | 5_1:+15750565 | Msa0720040:CDS |
| GGTATTGATGTATGTGAGGA+GGG | 0.553569 | 5_1:+15755585 | Msa0720040:three_prime_UTR |
| TAACTATGTGTATAGTGGAA+TGG | 0.553607 | 5_1:+15753860 | Msa0720040:CDS |
| TTTCCTAGTTGTGATTCTAA+CGG | 0.554507 | 5_1:-15754212 | None:intergenic |
| ACGAAGGAGATCAAAGACTT+TGG | 0.555409 | 5_1:-15754308 | None:intergenic |
| GAAGAAGAAGGAATATTGAG+AGG | 0.555846 | 5_1:+15750021 | Msa0720040:CDS |
| TTTGCAGAGGCAATGTGAAA+GGG | 0.557444 | 5_1:+15753911 | Msa0720040:CDS |
| ACTAGTTAGTTAAGGTGGTG+TGG | 0.559797 | 5_1:+15755699 | Msa0720040:three_prime_UTR |
| TACCAGCAGGACCATGAAGA+AGG | 0.560522 | 5_1:-15749479 | None:intergenic |
| AGCACCTTCAATTTGATGCA+GGG | 0.561062 | 5_1:-15755063 | None:intergenic |
| TCAGCATTTGATGAAACCAT+TGG | 0.561093 | 5_1:-15754870 | None:intergenic |
| GAGGGAACAATTTCAATGAC+TGG | 0.562240 | 5_1:-15755175 | None:intergenic |
| TGCATTGCACTTCTTCCACA+AGG | 0.562490 | 5_1:+15754834 | Msa0720040:CDS |
| ACCTACATTTATGCGAAGAA+GGG | 0.563662 | 5_1:-15754596 | None:intergenic |
| TATGGTTAGAGAAATTCGTA+TGG | 0.567633 | 5_1:+15755225 | Msa0720040:three_prime_UTR |
| GTGCTTCTGGCCATGCAAGT+GGG | 0.568255 | 5_1:+15753108 | Msa0720040:CDS |
| GAAGTGGCTCATATTGCTAA+CGG | 0.568936 | 5_1:+15754550 | Msa0720040:CDS |
| ATTGCTAACGGATCACATCC+GGG | 0.570408 | 5_1:+15754562 | Msa0720040:CDS |
| AGACAGTGTGATGAAATGAA+AGG | 0.570581 | 5_1:-15749373 | None:intergenic |
| GAAAGGTTAAGCTTTGCAGA+AGG | 0.572294 | 5_1:-15755005 | None:intergenic |
| AGGAAAGGGTTGAAAAGGCA+TGG | 0.572972 | 5_1:-15749886 | None:intergenic |
| CAAGTAATGTCAACAATGGG+AGG | 0.574313 | 5_1:+15749792 | Msa0720040:CDS |
| AGTGCCAATGCTGCTAACTC+AGG | 0.574318 | 5_1:+15754939 | Msa0720040:CDS |
| AAGAAAATGAGTCTCTCTAG+TGG | 0.575091 | 5_1:-15753534 | None:intergenic |
| CGAGAATCACTCCACTGGGT+TGG | 0.576021 | 5_1:-15754249 | None:intergenic |
| AACCAGAACTTAACCTGGCG+TGG | 0.579376 | 5_1:-15750578 | None:intergenic |
| GCCTCACTAGTTAGTTAAGG+TGG | 0.580091 | 5_1:+15755694 | Msa0720040:three_prime_UTR |
| CCATAATCCAAAAGAGAGGA+GGG | 0.581278 | 5_1:-15755193 | None:intergenic |
| GAGGAGGGTAGAGGGACCGA+GGG | 0.584418 | 5_1:+15755600 | Msa0720040:three_prime_UTR |
| ATTACCATGGAAGAAGGAAA+GGG | 0.585294 | 5_1:-15749900 | None:intergenic |
| GCTGAAGAGTCCCACTTGCA+TGG | 0.585312 | 5_1:-15753118 | None:intergenic |
| GAATCGTCGAACTCAGATGA+AGG | 0.585722 | 5_1:+15750604 | Msa0720040:CDS |
| TCCATAATCCAAAAGAGAGG+AGG | 0.586149 | 5_1:-15755194 | None:intergenic |
| TTGTCAAGTAATGTCAACAA+TGG | 0.587069 | 5_1:+15749788 | Msa0720040:CDS |
| ATGTATGTGAGGAGGGTAGA+GGG | 0.588397 | 5_1:+15755592 | Msa0720040:three_prime_UTR |
| ATATCAGGTCCCATTATACA+TGG | 0.589693 | 5_1:-15751395 | None:intergenic |
| GGTGGTGCCATTGTTTGGAG+TGG | 0.590059 | 5_1:-15752504 | None:intergenic |
| CCATGATTGTCCACCACAAG+TGG | 0.590603 | 5_1:-15754161 | None:intergenic |
| TGAAAGGGTTGCAAGCCTCA+TGG | 0.591016 | 5_1:+15753926 | Msa0720040:CDS |
| ATTATGTATGCAGGTAACAT+GGG | 0.594985 | 5_1:+15753791 | Msa0720040:intron |
| TAGACATGAACATTTATCCA+AGG | 0.595721 | 5_1:+15752556 | Msa0720040:CDS |
| AGTAGTAAGGGAAGGAACAA+GGG | 0.595894 | 5_1:+15755422 | Msa0720040:three_prime_UTR |
| ATCTGTGGCGTTCGTCACGA+AGG | 0.596909 | 5_1:-15754324 | None:intergenic |
| ATGTCTAAGTCCAGTGATGG+TGG | 0.600221 | 5_1:-15752540 | None:intergenic |
| TGTCAACAAAATGCCGAGGA+AGG | 0.601148 | 5_1:+15753563 | Msa0720040:CDS |
| AAATGCCCGGTTAAAAGAAG+AGG | 0.603680 | 5_1:+15751448 | Msa0720040:CDS |
| GATGGTGGCATAAGAGATGA+TGG | 0.607106 | 5_1:-15752525 | None:intergenic |
| ATTGAAGGTGCTCTTTGTGG+CGG | 0.608550 | 5_1:+15755074 | Msa0720040:CDS |
| TGGTATTGATGTATGTGAGG+AGG | 0.609582 | 5_1:+15755584 | Msa0720040:three_prime_UTR |
| TTGGCACTAGTAGTAGATGA+TGG | 0.610277 | 5_1:-15754924 | None:intergenic |
| TTTGATGCAGGGTATTGCAA+AGG | 0.610933 | 5_1:-15755052 | None:intergenic |
| GGAAGAAGTGCAATGCATGA+AGG | 0.611914 | 5_1:-15754828 | None:intergenic |
| TGATTGCTGTGACACTTGAA+AGG | 0.612049 | 5_1:-15755022 | None:intergenic |
| CTTAATATGACCACTTGTGG+TGG | 0.613209 | 5_1:+15754151 | Msa0720040:CDS |
| CTGATATGTTTCTGGCCATG+AGG | 0.614651 | 5_1:-15753941 | None:intergenic |
| AAGTAATGTCAACAATGGGA+GGG | 0.615730 | 5_1:+15749793 | Msa0720040:CDS |
| GAAGAAGTGCAATGCATGAA+GGG | 0.616666 | 5_1:-15754827 | None:intergenic |
| TGGCATTTGGTGCACAACGT+TGG | 0.617325 | 5_1:+15753880 | Msa0720040:CDS |
| CTTATCCCAAATACTGCAGG+AGG | 0.618005 | 5_1:+15753642 | Msa0720040:CDS |
| AGGAGTGCACACTACTTGGA+GGG | 0.620960 | 5_1:-15755149 | None:intergenic |
| CATGCCAAATGGCTATTCAA+GGG | 0.621111 | 5_1:+15753688 | Msa0720040:CDS |
| TTGAAGCTAGAGTTATGGAT+CGG | 0.627481 | 5_1:-15749852 | None:intergenic |
| GGCACTATCATAAACCCTTG+TGG | 0.627499 | 5_1:-15754849 | None:intergenic |
| TGGAAAAGTTGAATTAGCAA+CGG | 0.627770 | 5_1:+15755245 | Msa0720040:three_prime_UTR |
| CGACCTTACTAGAAAACCAA+AGG | 0.628582 | 5_1:-15755646 | None:intergenic |
| TCTGAAACCAGAACTTAACC+TGG | 0.629926 | 5_1:-15750583 | None:intergenic |
| TGAAAATGTGAAGGTTCAGG+TGG | 0.630308 | 5_1:-15752630 | None:intergenic |
| TGGTCGTCCACTCCAAACAA+TGG | 0.632170 | 5_1:+15752497 | Msa0720040:CDS |
| GCGGCGAGAATCACTCCACT+GGG | 0.633627 | 5_1:-15754253 | None:intergenic |
| CCACCCTCTTGAAAATGTGA+AGG | 0.635356 | 5_1:-15752639 | None:intergenic |
| AAATGCCGAGGAAGGAACCT+GGG | 0.635557 | 5_1:+15753571 | Msa0720040:CDS |
| TGATACCTTCTCCGGAAGCG+CGG | 0.635811 | 5_1:+15754083 | Msa0720040:CDS |
| GCGGGGAATTTAAGTATGTG+GGG | 0.636379 | 5_1:+15755478 | Msa0720040:three_prime_UTR |
| GAACCGCTTTGGATTCGGAA+CGG | 0.639395 | 5_1:+15752750 | Msa0720040:CDS |
| TCGGTCCAACTAGCTATGAG+TGG | 0.646383 | 5_1:+15754798 | Msa0720040:CDS |
| TGCATAACATCAAGATACAC+TGG | 0.647161 | 5_1:+15752477 | Msa0720040:CDS |
| TTAACTAGAGTAGTAAGGGA+AGG | 0.648162 | 5_1:+15755414 | Msa0720040:three_prime_UTR |
| ACACCGTTAGAATCACAACT+AGG | 0.649395 | 5_1:+15754209 | Msa0720040:CDS |
| ACAATTTCAATGACTGGACA+AGG | 0.651035 | 5_1:-15755169 | None:intergenic |
| AAATCCATAATCCAAAAGAG+AGG | 0.652616 | 5_1:-15755197 | None:intergenic |
| AAATGGTATTGATGTATGTG+AGG | 0.652933 | 5_1:+15755581 | Msa0720040:three_prime_UTR |
| AAGCCAAGTGGTTGAAACTG+CGG | 0.657898 | 5_1:-15754272 | None:intergenic |
| GCATTGCACTTCTTCCACAA+GGG | 0.658072 | 5_1:+15754835 | Msa0720040:CDS |
| ATCAACAGGAAAATCAACAA+TGG | 0.660991 | 5_1:-15753594 | None:intergenic |
| ACTGAGCCTGGCCAACCCAG+TGG | 0.663353 | 5_1:+15754238 | Msa0720040:CDS |
| GAAGAGATAATGGATCAAAG+TGG | 0.668091 | 5_1:+15750048 | Msa0720040:CDS |
| GTCTCTCTAGTGGATACCAA+CGG | 0.670714 | 5_1:-15753524 | None:intergenic |
| GCTGATACATCATCTGAACA+AGG | 0.673597 | 5_1:+15754888 | Msa0720040:CDS |
| TTCATGTCTAAGTCCAGTGA+TGG | 0.677862 | 5_1:-15752543 | None:intergenic |
| GTCTTGAATGACACAGCCAG+AGG | 0.687101 | 5_1:-15753666 | None:intergenic |
| ACAGTGTGATGAAATGAAAG+GGG | 0.689420 | 5_1:-15749371 | None:intergenic |
| ACCACCTTAACTAACTAGTG+AGG | 0.694802 | 5_1:-15755695 | None:intergenic |
| TCGCCGTTCCGAATCCAAAG+CGG | 0.699251 | 5_1:-15752753 | None:intergenic |
| GGAATCATTTCGGTGCATGG+TGG | 0.702254 | 5_1:-15752594 | None:intergenic |
| GTATTGTCAACAAAATGCCG+AGG | 0.715030 | 5_1:+15753559 | Msa0720040:CDS |
| AGAAACATATCAGATCTTGG+AGG | 0.715292 | 5_1:+15753951 | Msa0720040:CDS |
| TTTGTGGTACCTGAGATCTG+TGG | 0.717584 | 5_1:-15754339 | None:intergenic |
| AAGCTTAGTAGTCTACACTA+CGG | 0.725334 | 5_1:+15754764 | Msa0720040:CDS |
| ATGAGGATAAGGAAGCCAAG+TGG | 0.750424 | 5_1:-15754284 | None:intergenic |
| GGTGGCATAAGAGATGATGG+TGG | 0.803191 | 5_1:-15752522 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAAAAAAAAATAGTTT+AGG | - | chr5_1:15749517-15749536 | None:intergenic | 10.0% |
| !!! | TAATTTTTCATATAATATCA+TGG | - | chr5_1:15750316-15750335 | None:intergenic | 10.0% |
| !!! | TTTTAATTGTTTACTAATTT+TGG | + | chr5_1:15751228-15751247 | Msa0720040:intron | 10.0% |
| !!! | TTTAATTGTTTACTAATTTT+GGG | + | chr5_1:15751229-15751248 | Msa0720040:intron | 10.0% |
| !!! | ATTTTAATTAAAAATCATGT+TGG | + | chr5_1:15751648-15751667 | Msa0720040:intron | 10.0% |
| !! | AAAATGTATAAAATAATAAG+TGG | + | chr5_1:15751906-15751925 | Msa0720040:intron | 10.0% |
| !! | AATAAAAATTATACAAAATG+AGG | + | chr5_1:15751988-15752007 | Msa0720040:intron | 10.0% |
| !!! | GAGAAATTAATTAATTTTTT+TGG | - | chr5_1:15754004-15754023 | None:intergenic | 10.0% |
| !! | TAAAATAAAATCAAGAATTT+AGG | - | chr5_1:15754489-15754508 | None:intergenic | 10.0% |
| !!! | ATTTTATTTTATTTTACAGA+TGG | + | chr5_1:15754498-15754517 | Msa0720040:intron | 10.0% |
| !!! | ATTTTTTTTTCTTTTCACTT+TGG | + | chr5_1:15749522-15749541 | Msa0720040:intron | 15.0% |
| !!! | AGAATGTTTTTTTTATTGTT+TGG | + | chr5_1:15749637-15749656 | Msa0720040:intron | 15.0% |
| !! | AAATAGTAAAAATATTACCA+TGG | - | chr5_1:15749916-15749935 | None:intergenic | 15.0% |
| !!! | TAAACCCTAAATATATTTTA+AGG | + | chr5_1:15750435-15750454 | Msa0720040:intron | 15.0% |
| !!! | TTAGCCTTAAAATATATTTA+GGG | - | chr5_1:15750442-15750461 | None:intergenic | 15.0% |
| !!! | TTTAGCCTTAAAATATATTT+AGG | - | chr5_1:15750443-15750462 | None:intergenic | 15.0% |
| !! | TTCATATAGTTAATGATTAT+TGG | + | chr5_1:15750932-15750951 | Msa0720040:intron | 15.0% |
| !! | TCAAAACCATTAAAAAAAAT+TGG | + | chr5_1:15751096-15751115 | Msa0720040:intron | 15.0% |
| !! | CAAAACCATTAAAAAAAATT+GGG | + | chr5_1:15751097-15751116 | Msa0720040:intron | 15.0% |
| !! | AAAACCATTAAAAAAAATTG+GGG | + | chr5_1:15751098-15751117 | Msa0720040:intron | 15.0% |
| !!! | TTCTAAGAATAAATACTTAA+TGG | - | chr5_1:15751132-15751151 | None:intergenic | 15.0% |
| !!! | ATTGTTGTTGTTATTATTAT+AGG | + | chr5_1:15751256-15751275 | Msa0720040:intron | 15.0% |
| !! | AAAAAATAGTATATGTTAAG+TGG | + | chr5_1:15751812-15751831 | Msa0720040:intron | 15.0% |
| !!! | TCAATTGTATATTTTTAACA+AGG | + | chr5_1:15751851-15751870 | Msa0720040:intron | 15.0% |
| !! | AAAAAATGCATGATTTAATT+TGG | + | chr5_1:15752419-15752438 | Msa0720040:intron | 15.0% |
| !!! | AAGAATTTTTAAAGTTTTGT+TGG | - | chr5_1:15753625-15753644 | None:intergenic | 15.0% |
| !! | AGAATGTAATAAAAATATCT+AGG | - | chr5_1:15753726-15753745 | None:intergenic | 15.0% |
| !!! | TAATTTTTTATTATGTATGC+AGG | + | chr5_1:15753782-15753801 | Msa0720040:intron | 15.0% |
| !! | GAAAATAATTAAATTAGCAA+TGG | - | chr5_1:15755366-15755385 | None:intergenic | 15.0% |
| !!! | ATTTAATTATTTTCCAACTA+TGG | + | chr5_1:15755372-15755391 | Msa0720040:three_prime_UTR | 15.0% |
| !!! | TTTAATTATTTTCCAACTAT+GGG | + | chr5_1:15755373-15755392 | Msa0720040:three_prime_UTR | 15.0% |
| !!! | ATTTTTTTGATGTTAACATC+AGG | + | chr5_1:15749681-15749700 | Msa0720040:intron | 20.0% |
| !!! | TGTAACTTTTTTCTTCATTT+TGG | + | chr5_1:15749978-15749997 | Msa0720040:intron | 20.0% |
| !! | AAAAATTATGACCTAACATA+TGG | + | chr5_1:15750328-15750347 | Msa0720040:intron | 20.0% |
| !! | AAAGAAGAATAAACGTTTAA+TGG | - | chr5_1:15750679-15750698 | None:intergenic | 20.0% |
| !! | TATTATTGTTTAGTACACTA+CGG | + | chr5_1:15751160-15751179 | Msa0720040:intron | 20.0% |
| !!! | AATATTTTATGTCCTAATTG+TGG | + | chr5_1:15751368-15751387 | Msa0720040:CDS | 20.0% |
| !!! | AGAAGAGGTATTTTTTTTTT+TGG | + | chr5_1:15751463-15751482 | Msa0720040:intron | 20.0% |
| !! | TTAAAGTGAAGAATTTACAT+AGG | - | chr5_1:15751725-15751744 | None:intergenic | 20.0% |
| !!! | AATTCTTCACTTTAAGAATA+TGG | + | chr5_1:15751730-15751749 | Msa0720040:intron | 20.0% |
| !!! | AAGTCATATTTTTTGACAAT+AGG | + | chr5_1:15751939-15751958 | Msa0720040:intron | 20.0% |
| !! | ACAAACTAATAATTCCTAAA+AGG | - | chr5_1:15752037-15752056 | None:intergenic | 20.0% |
| !!! | TCACTTTTTTTAACTGTTTT+TGG | + | chr5_1:15752117-15752136 | Msa0720040:intron | 20.0% |
| !! | ACAAATTCATTTATTCTTTG+TGG | + | chr5_1:15752213-15752232 | Msa0720040:intron | 20.0% |
| !! | TTCTTATACTATTAGAGATT+AGG | - | chr5_1:15752400-15752419 | None:intergenic | 20.0% |
| !! | TGGAAATAAATTAAAAGAGA+AGG | - | chr5_1:15752975-15752994 | None:intergenic | 20.0% |
| !! | CAAAATTCATAAGAAACAAA+TGG | - | chr5_1:15752995-15753014 | None:intergenic | 20.0% |
| !! | AAATATAAAACACATCACAA+AGG | - | chr5_1:15753411-15753430 | None:intergenic | 20.0% |
| !! | GAATTATTCTTCAAAACATT+AGG | + | chr5_1:15753755-15753774 | Msa0720040:intron | 20.0% |
| !! | CATAGTTACTAAATATTTGA+TGG | - | chr5_1:15753848-15753867 | None:intergenic | 20.0% |
| !!! | GAGTGTTTTTAAATAAAAGA+TGG | + | chr5_1:15755448-15755467 | Msa0720040:three_prime_UTR | 20.0% |
| !! | TAGTAATTAACATTGTGAAA+TGG | + | chr5_1:15755564-15755583 | Msa0720040:three_prime_UTR | 20.0% |
| ! | AAAAATATTACCATGGAAGA+AGG | - | chr5_1:15749909-15749928 | None:intergenic | 25.0% |
| !!! | ATAACCAAGGTTTTAAATTG+CGG | + | chr5_1:15750273-15750292 | Msa0720040:intron | 25.0% |
| !! | AATTATATGCAGTTTGTTCA+AGG | + | chr5_1:15750496-15750515 | Msa0720040:intron | 25.0% |
| ! | AACAAACATCTATTACTACT+TGG | + | chr5_1:15750876-15750895 | Msa0720040:intron | 25.0% |
| ! | TGCTATATATCATCATTACT+AGG | + | chr5_1:15751046-15751065 | Msa0720040:intron | 25.0% |
| ! | GCTATATATCATCATTACTA+GGG | + | chr5_1:15751047-15751066 | Msa0720040:intron | 25.0% |
| !!! | AGTACCCCAATTTTTTTTAA+TGG | - | chr5_1:15751105-15751124 | None:intergenic | 25.0% |
| !! | AAAATACCTCTTCTTTTAAC+CGG | - | chr5_1:15751457-15751476 | None:intergenic | 25.0% |
| !!! | AGAGGTATTTTTTTTTTTGG+TGG | + | chr5_1:15751466-15751485 | Msa0720040:intron | 25.0% |
| ! | TTATGTGTGTGAGTTTATAA+TGG | - | chr5_1:15751510-15751529 | None:intergenic | 25.0% |
| ! | AATTATACAAAATGAGGCTA+AGG | + | chr5_1:15751994-15752013 | Msa0720040:intron | 25.0% |
| ! | TAGTGACAGTTTATTATTGA+AGG | + | chr5_1:15752280-15752299 | Msa0720040:intron | 25.0% |
| ! | AGTGACAGTTTATTATTGAA+GGG | + | chr5_1:15752281-15752300 | Msa0720040:intron | 25.0% |
| !! | TCAAATAAATTGATTAGCCA+CGG | + | chr5_1:15752359-15752378 | Msa0720040:intron | 25.0% |
| ! | ATGTATACCAATGATAAGAT+AGG | + | chr5_1:15753248-15753267 | Msa0720040:intron | 25.0% |
| ! | GTAAACACCAATATATAACT+AGG | - | chr5_1:15753334-15753353 | None:intergenic | 25.0% |
| !! | TTACTAAATATTTGATGGAC+AGG | - | chr5_1:15753843-15753862 | None:intergenic | 25.0% |
| ! | TTTAGTAACTATGTGTATAG+TGG | + | chr5_1:15753855-15753874 | Msa0720040:CDS | 25.0% |
| !!! | GGATTATGGATTTTTAGTTA+TGG | + | chr5_1:15755207-15755226 | Msa0720040:three_prime_UTR | 25.0% |
| ! | GTAATTAACTAGAGTAGTAA+GGG | + | chr5_1:15755410-15755429 | Msa0720040:three_prime_UTR | 25.0% |
| !!! | AATAAAAGATGGATTTTGAG+CGG | + | chr5_1:15755459-15755478 | Msa0720040:three_prime_UTR | 25.0% |
| !! | TAATTGTTGTGTGTTTTGTA+TGG | + | chr5_1:15755530-15755549 | Msa0720040:three_prime_UTR | 25.0% |
| !! | AATTGTTGTGTGTTTTGTAT+GGG | + | chr5_1:15755531-15755550 | Msa0720040:three_prime_UTR | 25.0% |
| !!! | GGTTTTGAAAATGAAGTGAA+AGG | - | chr5_1:15749449-15749468 | None:intergenic | 30.0% |
| TATTGTTTGGATTCTGATAC+AGG | + | chr5_1:15749650-15749669 | Msa0720040:intron | 30.0% | |
| TTTGATGTTAACATCAGGTT+TGG | + | chr5_1:15749686-15749705 | Msa0720040:intron | 30.0% | |
| GTGTGGTTAAGAAAAATGTA+TGG | + | chr5_1:15749762-15749781 | Msa0720040:exon | 30.0% | |
| TTGTCAAGTAATGTCAACAA+TGG | + | chr5_1:15749788-15749807 | Msa0720040:CDS | 30.0% | |
| TGTCAAGTAATGTCAACAAT+GGG | + | chr5_1:15749789-15749808 | Msa0720040:CDS | 30.0% | |
| TTTGAACAGAAAGAAGAAGA+AGG | + | chr5_1:15750009-15750028 | Msa0720040:intron | 30.0% | |
| TATTATACGCTTCCATTTCT+TGG | - | chr5_1:15750182-15750201 | None:intergenic | 30.0% | |
| AATTCATACAGTGATAACCA+AGG | + | chr5_1:15750260-15750279 | Msa0720040:intron | 30.0% | |
| ! | TCAGTCTTTGTTTATCATCT+GGG | - | chr5_1:15750532-15750551 | None:intergenic | 30.0% |
| ! | TTCAGTCTTTGTTTATCATC+TGG | - | chr5_1:15750533-15750552 | None:intergenic | 30.0% |
| !!! | AGAAAACGCGTTTTTTCATT+GGG | - | chr5_1:15750822-15750841 | None:intergenic | 30.0% |
| !!! | AAGAAAACGCGTTTTTTCAT+TGG | - | chr5_1:15750823-15750842 | None:intergenic | 30.0% |
| ! | TGAAAAAACGCGTTTTCTTT+TGG | + | chr5_1:15750824-15750843 | Msa0720040:intron | 30.0% |
| ! | GAAAAAACGCGTTTTCTTTT+GGG | + | chr5_1:15750825-15750844 | Msa0720040:intron | 30.0% |
| GGTTAAATGCGTTACATTAA+TGG | - | chr5_1:15750985-15751004 | None:intergenic | 30.0% | |
| CAATAAATATGAGTAGCGTT+TGG | - | chr5_1:15751028-15751047 | None:intergenic | 30.0% | |
| CACTACGGTTGATTAATTAT+TGG | + | chr5_1:15751175-15751194 | Msa0720040:intron | 30.0% | |
| GTTTGAAGAATGAGAACTAT+AGG | + | chr5_1:15751327-15751346 | Msa0720040:CDS | 30.0% | |
| ! | ATTTTATGTCCTAATTGTGG+TGG | + | chr5_1:15751371-15751390 | Msa0720040:CDS | 30.0% |
| ! | TTTTATGTCCTAATTGTGGT+GGG | + | chr5_1:15751372-15751391 | Msa0720040:CDS | 30.0% |
| ! | AAATACCTCTTCTTTTAACC+GGG | - | chr5_1:15751456-15751475 | None:intergenic | 30.0% |
| TATAAACTCACACACATAAG+TGG | + | chr5_1:15751511-15751530 | Msa0720040:intron | 30.0% | |
| AACACAAGTTAGTCAAAGTT+AGG | - | chr5_1:15751595-15751614 | None:intergenic | 30.0% | |
| ! | CTAAGGCAAAATCTAAAATG+AGG | + | chr5_1:15752011-15752030 | Msa0720040:intron | 30.0% |
| !! | AATCTAAAATGAGGCCTTTT+AGG | + | chr5_1:15752020-15752039 | Msa0720040:intron | 30.0% |
| ! | CAAATAAATTGATTAGCCAC+GGG | + | chr5_1:15752360-15752379 | Msa0720040:intron | 30.0% |
| TACTATTAGAGATTAGGTCA+TGG | - | chr5_1:15752394-15752413 | None:intergenic | 30.0% | |
| TAGACATGAACATTTATCCA+AGG | + | chr5_1:15752556-15752575 | Msa0720040:CDS | 30.0% | |
| !! | TTAATTTTGATGAGCATGCT+AGG | + | chr5_1:15752793-15752812 | Msa0720040:CDS | 30.0% |
| TTCCTTTGCTTAAGATTCAA+AGG | - | chr5_1:15752831-15752850 | None:intergenic | 30.0% | |
| TTAAGCAAAGGAATGAGTTA+AGG | + | chr5_1:15752838-15752857 | Msa0720040:CDS | 30.0% | |
| !!! | ATGCTGTAAGTTTTGTTGTT+TGG | + | chr5_1:15752928-15752947 | Msa0720040:intron | 30.0% |
| TCTTTACCTTGTAGCAAAAA+TGG | + | chr5_1:15753027-15753046 | Msa0720040:intron | 30.0% | |
| ACTGTTCAAATTATAGCTTC+AGG | + | chr5_1:15753086-15753105 | Msa0720040:CDS | 30.0% | |
| TGACACACCTAGTTATATAT+TGG | + | chr5_1:15753324-15753343 | Msa0720040:intron | 30.0% | |
| ATCAACAGGAAAATCAACAA+TGG | - | chr5_1:15753597-15753616 | None:intergenic | 30.0% | |
| TATTATGTATGCAGGTAACA+TGG | + | chr5_1:15753790-15753809 | Msa0720040:intron | 30.0% | |
| ATTATGTATGCAGGTAACAT+GGG | + | chr5_1:15753791-15753810 | Msa0720040:intron | 30.0% | |
| ! | TAACTATGTGTATAGTGGAA+TGG | + | chr5_1:15753860-15753879 | Msa0720040:CDS | 30.0% |
| GCTTGATGAAATTAGCAAAT+AGG | + | chr5_1:15754110-15754129 | Msa0720040:CDS | 30.0% | |
| TTTCCTAGTTGTGATTCTAA+CGG | - | chr5_1:15754215-15754234 | None:intergenic | 30.0% | |
| ACACCATTCTTAAAATCACA+GGG | + | chr5_1:15754374-15754393 | Msa0720040:intron | 30.0% | |
| !! | ATTCCCTGTGATTTTAAGAA+TGG | - | chr5_1:15754380-15754399 | None:intergenic | 30.0% |
| TCAAGATATTAAAGTCACAC+CGG | - | chr5_1:15754418-15754437 | None:intergenic | 30.0% | |
| ACTTTAATATCTTGATGTCG+CGG | + | chr5_1:15754423-15754442 | Msa0720040:intron | 30.0% | |
| ! | TATGATTTTCTTACACATGC+AGG | + | chr5_1:15754677-15754696 | Msa0720040:intron | 30.0% |
| AAATCCATAATCCAAAAGAG+AGG | - | chr5_1:15755200-15755219 | None:intergenic | 30.0% | |
| TATGGTTAGAGAAATTCGTA+TGG | + | chr5_1:15755225-15755244 | Msa0720040:three_prime_UTR | 30.0% | |
| TGGAAAAGTTGAATTAGCAA+CGG | + | chr5_1:15755245-15755264 | Msa0720040:three_prime_UTR | 30.0% | |
| AGAATAGTGACAAGTGAATT+AGG | + | chr5_1:15755311-15755330 | Msa0720040:three_prime_UTR | 30.0% | |
| GGTAATTAACTAGAGTAGTA+AGG | + | chr5_1:15755409-15755428 | Msa0720040:three_prime_UTR | 30.0% | |
| !! | ATAAAAGATGGATTTTGAGC+GGG | + | chr5_1:15755460-15755479 | Msa0720040:three_prime_UTR | 30.0% |
| !! | AAATGGTATTGATGTATGTG+AGG | + | chr5_1:15755581-15755600 | Msa0720040:three_prime_UTR | 30.0% |
| !! | AGAAAACCAAAGGTATTATC+TGG | - | chr5_1:15755639-15755658 | None:intergenic | 30.0% |
| !!! | ATACCTTTGGTTTTCTAGTA+AGG | + | chr5_1:15755643-15755662 | Msa0720040:three_prime_UTR | 30.0% |
| ACAGTGTGATGAAATGAAAG+GGG | - | chr5_1:15749374-15749393 | None:intergenic | 35.0% | |
| GACAGTGTGATGAAATGAAA+GGG | - | chr5_1:15749375-15749394 | None:intergenic | 35.0% | |
| AGACAGTGTGATGAAATGAA+AGG | - | chr5_1:15749376-15749395 | None:intergenic | 35.0% | |
| GTGTAGAAGAATCTATTCAG+AGG | - | chr5_1:15749575-15749594 | None:intergenic | 35.0% | |
| GTAAAACAAAGATTCCTGAG+AGG | - | chr5_1:15749597-15749616 | None:intergenic | 35.0% | |
| AAGCACAGTAAAAAACAGTG+TGG | + | chr5_1:15749745-15749764 | Msa0720040:five_prime_UTR | 35.0% | |
| AAGTAATGTCAACAATGGGA+GGG | + | chr5_1:15749793-15749812 | Msa0720040:CDS | 35.0% | |
| TTGAAGCTAGAGTTATGGAT+CGG | - | chr5_1:15749855-15749874 | None:intergenic | 35.0% | |
| TGAAGTTGAAGCTAGAGTTA+TGG | - | chr5_1:15749860-15749879 | None:intergenic | 35.0% | |
| ATTACCATGGAAGAAGGAAA+GGG | - | chr5_1:15749903-15749922 | None:intergenic | 35.0% | |
| TATTACCATGGAAGAAGGAA+AGG | - | chr5_1:15749904-15749923 | None:intergenic | 35.0% | |
| GAAGAAGAAGGAATATTGAG+AGG | + | chr5_1:15750021-15750040 | Msa0720040:CDS | 35.0% | |
| GAGAGGTAAAGAAGAGATAA+TGG | + | chr5_1:15750038-15750057 | Msa0720040:CDS | 35.0% | |
| !! | GAAGAGATAATGGATCAAAG+TGG | + | chr5_1:15750048-15750067 | Msa0720040:CDS | 35.0% |
| !! | ATAATGGATCAAAGTGGTTC+AGG | + | chr5_1:15750054-15750073 | Msa0720040:CDS | 35.0% |
| ! | GAACAAGTTGAAGATAAGTC+AGG | + | chr5_1:15750081-15750100 | Msa0720040:CDS | 35.0% |
| !!! | AAGGTTTTAAATTGCGGTTG+CGG | + | chr5_1:15750279-15750298 | Msa0720040:intron | 35.0% |
| ! | GGTTGACCTTGCTTTAAATA+TGG | + | chr5_1:15750349-15750368 | Msa0720040:intron | 35.0% |
| ! | ACGAGACCATATTTAAAGCA+AGG | - | chr5_1:15750358-15750377 | None:intergenic | 35.0% |
| ACTGAAACTAAGCCATGATT+TGG | + | chr5_1:15750547-15750566 | Msa0720040:CDS | 35.0% | |
| CTGAAACTAAGCCATGATTT+GGG | + | chr5_1:15750548-15750567 | Msa0720040:CDS | 35.0% | |
| TCTCACATTCATTTCGTCAA+AGG | - | chr5_1:15750720-15750739 | None:intergenic | 35.0% | |
| AAACCCTAAACTGTTGTACA+AGG | + | chr5_1:15750751-15750770 | Msa0720040:intron | 35.0% | |
| AGACCTTGTACAACAGTTTA+GGG | - | chr5_1:15750757-15750776 | None:intergenic | 35.0% | |
| AAGACCTTGTACAACAGTTT+AGG | - | chr5_1:15750758-15750777 | None:intergenic | 35.0% | |
| GGAATACAGACTGTATATGA+TGG | - | chr5_1:15750964-15750983 | None:intergenic | 35.0% | |
| TACTAGGGTTACACTTCAAA+CGG | + | chr5_1:15751062-15751081 | Msa0720040:intron | 35.0% | |
| TGAGAACTATAGGCTACAAT+CGG | + | chr5_1:15751337-15751356 | Msa0720040:CDS | 35.0% | |
| ATATCAGGTCCCATTATACA+TGG | - | chr5_1:15751398-15751417 | None:intergenic | 35.0% | |
| ! | ATGTATAATGGGACCTGATA+TGG | + | chr5_1:15751397-15751416 | Msa0720040:CDS | 35.0% |
| ! | TGTATAATGGGACCTGATAT+GGG | + | chr5_1:15751398-15751417 | Msa0720040:CDS | 35.0% |
| ! | AACTTCGATTTGAAAATGCC+CGG | + | chr5_1:15751435-15751454 | Msa0720040:CDS | 35.0% |
| !! | TTTTTGGTGGATAGACGAAA+TGG | + | chr5_1:15751479-15751498 | Msa0720040:intron | 35.0% |
| TGCATAACATCAAGATACAC+TGG | + | chr5_1:15752477-15752496 | Msa0720040:CDS | 35.0% | |
| TCTTGAAAATGTGAAGGTTC+AGG | - | chr5_1:15752636-15752655 | None:intergenic | 35.0% | |
| !! | TGAACCTTCACATTTTCAAG+AGG | + | chr5_1:15752635-15752654 | Msa0720040:CDS | 35.0% |
| !! | GAACCTTCACATTTTCAAGA+GGG | + | chr5_1:15752636-15752655 | Msa0720040:CDS | 35.0% |
| ! | AGATGAGAAATCACTTGCTA+TGG | + | chr5_1:15752677-15752696 | Msa0720040:CDS | 35.0% |
| TACCTTGTAGCAAAAATGGA+TGG | + | chr5_1:15753031-15753050 | Msa0720040:intron | 35.0% | |
| !! | TTCCATCCATTTTTGCTACA+AGG | - | chr5_1:15753036-15753055 | None:intergenic | 35.0% |
| TGTTTCCAACAATTGTTGCT+AGG | + | chr5_1:15753057-15753076 | Msa0720040:CDS | 35.0% | |
| GTTTCCAACAATTGTTGCTA+GGG | + | chr5_1:15753058-15753077 | Msa0720040:CDS | 35.0% | |
| ACTCAGACCTATCTTATCAT+TGG | - | chr5_1:15753258-15753277 | None:intergenic | 35.0% | |
| TCTGAGTATCCAATATGTGT+CGG | + | chr5_1:15753271-15753290 | Msa0720040:intron | 35.0% | |
| AAGAAAATGAGTCTCTCTAG+TGG | - | chr5_1:15753537-15753556 | None:intergenic | 35.0% | |
| ! | CTAGAGAGACTCATTTTCTT+CGG | + | chr5_1:15753537-15753556 | Msa0720040:CDS | 35.0% |
| ! | TTTTGTTGGAAGCTATCAAC+AGG | - | chr5_1:15753611-15753630 | None:intergenic | 35.0% |
| ATTCTTATCCCAAATACTGC+AGG | + | chr5_1:15753639-15753658 | Msa0720040:CDS | 35.0% | |
| TCCAAGATCTGATATGTTTC+TGG | - | chr5_1:15753952-15753971 | None:intergenic | 35.0% | |
| AGAAACATATCAGATCTTGG+AGG | + | chr5_1:15753951-15753970 | Msa0720040:CDS | 35.0% | |
| ! | ACAATCATGGACTGCTATAT+CGG | + | chr5_1:15754174-15754193 | Msa0720040:CDS | 35.0% |
| AAGACTTTGGTATGAGGATA+AGG | - | chr5_1:15754298-15754317 | None:intergenic | 35.0% | |
| AGATCAAAGACTTTGGTATG+AGG | - | chr5_1:15754304-15754323 | None:intergenic | 35.0% | |
| !! | GTGTGGTGATGAATATTTTG+TGG | - | chr5_1:15754358-15754377 | None:intergenic | 35.0% |
| !! | CTGTGATTTTAAGAATGGTG+TGG | - | chr5_1:15754375-15754394 | None:intergenic | 35.0% |
| CACACCATTCTTAAAATCAC+AGG | + | chr5_1:15754373-15754392 | Msa0720040:intron | 35.0% | |
| GAATTGTAGTCAAATGCAAC+CGG | + | chr5_1:15754396-15754415 | Msa0720040:intron | 35.0% | |
| AGATGGATGCACTTTCTAAT+GGG | + | chr5_1:15754515-15754534 | Msa0720040:intron | 35.0% | |
| TGGGAACTCATTAAATGAAG+TGG | + | chr5_1:15754534-15754553 | Msa0720040:CDS | 35.0% | |
| ACCTACATTTATGCGAAGAA+GGG | - | chr5_1:15754599-15754618 | None:intergenic | 35.0% | |
| AACCTACATTTATGCGAAGA+AGG | - | chr5_1:15754600-15754619 | None:intergenic | 35.0% | |
| AAGCTTAGTAGTCTACACTA+CGG | + | chr5_1:15754764-15754783 | Msa0720040:CDS | 35.0% | |
| TCAGCATTTGATGAAACCAT+TGG | - | chr5_1:15754873-15754892 | None:intergenic | 35.0% | |
| ! | TCAGGTTGTCTTCTTATCAT+GGG | + | chr5_1:15754957-15754976 | Msa0720040:CDS | 35.0% |
| AATACCCTGCATCAAATTGA+AGG | + | chr5_1:15755059-15755078 | Msa0720040:CDS | 35.0% | |
| ACTAACAGCAATTGCTTTGT+TGG | + | chr5_1:15755098-15755117 | Msa0720040:CDS | 35.0% | |
| ! | CTAACAGCAATTGCTTTGTT+GGG | + | chr5_1:15755099-15755118 | Msa0720040:CDS | 35.0% |
| ACAATTTCAATGACTGGACA+AGG | - | chr5_1:15755172-15755191 | None:intergenic | 35.0% | |
| ACAATTCATGTTCCCATAGT+TGG | - | chr5_1:15755388-15755407 | None:intergenic | 35.0% | |
| ACTATGGGAACATGAATTGT+AGG | + | chr5_1:15755388-15755407 | Msa0720040:three_prime_UTR | 35.0% | |
| TTAACTAGAGTAGTAAGGGA+AGG | + | chr5_1:15755414-15755433 | Msa0720040:three_prime_UTR | 35.0% | |
| !! | TAAAAGATGGATTTTGAGCG+GGG | + | chr5_1:15755461-15755480 | Msa0720040:three_prime_UTR | 35.0% |
| TTTAAGTATGTGGGGTGTAT+TGG | + | chr5_1:15755486-15755505 | Msa0720040:three_prime_UTR | 35.0% | |
| !! | CATGAAGAAGGTTCTGAAAC+TGG | - | chr5_1:15749470-15749489 | None:intergenic | 40.0% |
| CAGTTTCAGAACCTTCTTCA+TGG | + | chr5_1:15749468-15749487 | Msa0720040:five_prime_UTR | 40.0% | |
| !!! | GTTTTAGAGAGTATACCAGC+AGG | - | chr5_1:15749495-15749514 | None:intergenic | 40.0% |
| TAGATTCTTCTACACCTCTC+AGG | + | chr5_1:15749580-15749599 | Msa0720040:intron | 40.0% | |
| CAAGTAATGTCAACAATGGG+AGG | + | chr5_1:15749792-15749811 | Msa0720040:CDS | 40.0% | |
| GAAGAAGGAAAGGGTTGAAA+AGG | - | chr5_1:15749894-15749913 | None:intergenic | 40.0% | |
| ! | GCAACCGCAATTTAAAACCT+TGG | - | chr5_1:15750280-15750299 | None:intergenic | 40.0% |
| AGCAAGGTCAACCATATGTT+AGG | - | chr5_1:15750342-15750361 | None:intergenic | 40.0% | |
| AAATATGGTCTCGTTGCAGT+TGG | + | chr5_1:15750364-15750383 | Msa0720040:intron | 40.0% | |
| ! | CTTTGTTTATCATCTGGGTG+TGG | - | chr5_1:15750527-15750546 | None:intergenic | 40.0% |
| ! | TCTGAAACCAGAACTTAACC+TGG | - | chr5_1:15750586-15750605 | None:intergenic | 40.0% |
| TTAACCTTACCTGTCACATG+TGG | + | chr5_1:15750999-15751018 | Msa0720040:intron | 40.0% | |
| ACTAGGGTTACACTTCAAAC+GGG | + | chr5_1:15751063-15751082 | Msa0720040:intron | 40.0% | |
| TGATCATCAAAGCCCATATC+AGG | - | chr5_1:15751413-15751432 | None:intergenic | 40.0% | |
| ! | GGGCATTTTCAAATCGAAGT+TGG | - | chr5_1:15751436-15751455 | None:intergenic | 40.0% |
| AAATGCCCGGTTAAAAGAAG+AGG | + | chr5_1:15751448-15751467 | Msa0720040:CDS | 40.0% | |
| AAACTCACACACATAAGTGG+AGG | + | chr5_1:15751514-15751533 | Msa0720040:intron | 40.0% | |
| AAATGCCGAAATTGTTAGGC+CGG | - | chr5_1:15751569-15751588 | None:intergenic | 40.0% | |
| GCCTAACAATTTCGGCATTT+CGG | + | chr5_1:15751569-15751588 | Msa0720040:intron | 40.0% | |
| TTCATGTCTAAGTCCAGTGA+TGG | - | chr5_1:15752546-15752565 | None:intergenic | 40.0% | |
| CATAGGGACAGGAATCATTT+CGG | - | chr5_1:15752607-15752626 | None:intergenic | 40.0% | |
| AAGGTTCAGGTGGTAACATA+GGG | - | chr5_1:15752623-15752642 | None:intergenic | 40.0% | |
| TGAAAATGTGAAGGTTCAGG+TGG | - | chr5_1:15752633-15752652 | None:intergenic | 40.0% | |
| AGAGGGTGGTCTCTTATTAA+TGG | + | chr5_1:15752653-15752672 | Msa0720040:CDS | 40.0% | |
| GTCAAATGAATGAACCGCTT+TGG | + | chr5_1:15752739-15752758 | Msa0720040:CDS | 40.0% | |
| ! | TGAATGAACCGCTTTGGATT+CGG | + | chr5_1:15752745-15752764 | Msa0720040:CDS | 40.0% |
| !!! | AGCATGCTAGGCTTTTTCAA+TGG | + | chr5_1:15752805-15752824 | Msa0720040:CDS | 40.0% |
| GGCCTTTGAATCTTAAGCAA+AGG | + | chr5_1:15752826-15752845 | Msa0720040:CDS | 40.0% | |
| ATTATAGCTTCAGGTGCTTC+TGG | + | chr5_1:15753095-15753114 | Msa0720040:CDS | 40.0% | |
| ! | TAGCCAGTTTCACTTGTTAG+TGG | + | chr5_1:15753223-15753242 | Msa0720040:intron | 40.0% |
| TAGCCACTAACAAGTGAAAC+TGG | - | chr5_1:15753229-15753248 | None:intergenic | 40.0% | |
| TGTCTGATACCGACACATAT+TGG | - | chr5_1:15753283-15753302 | None:intergenic | 40.0% | |
| ATTCCAAGTTCTTTCTCCGT+TGG | + | chr5_1:15753508-15753527 | Msa0720040:CDS | 40.0% | |
| ATACCAACGGAGAAAGAACT+TGG | - | chr5_1:15753514-15753533 | None:intergenic | 40.0% | |
| GTATTGTCAACAAAATGCCG+AGG | + | chr5_1:15753559-15753578 | Msa0720040:CDS | 40.0% | |
| GTCATTCAAGACATGCCAAA+TGG | + | chr5_1:15753677-15753696 | Msa0720040:CDS | 40.0% | |
| ACATGCCAAATGGCTATTCA+AGG | + | chr5_1:15753687-15753706 | Msa0720040:CDS | 40.0% | |
| CATGCCAAATGGCTATTCAA+GGG | + | chr5_1:15753688-15753707 | Msa0720040:CDS | 40.0% | |
| TGTACCCTTGAATAGCCATT+TGG | - | chr5_1:15753695-15753714 | None:intergenic | 40.0% | |
| ! | GTGTATAGTGGAATGGCATT+TGG | + | chr5_1:15753867-15753886 | Msa0720040:CDS | 40.0% |
| ! | TTTTGCAGAGGCAATGTGAA+AGG | + | chr5_1:15753910-15753929 | Msa0720040:CDS | 40.0% |
| TTTGCAGAGGCAATGTGAAA+GGG | + | chr5_1:15753911-15753930 | Msa0720040:CDS | 40.0% | |
| GCCAGAAACATATCAGATCT+TGG | + | chr5_1:15753948-15753967 | Msa0720040:CDS | 40.0% | |
| AGCCTTAATATGACCACTTG+TGG | + | chr5_1:15754148-15754167 | Msa0720040:CDS | 40.0% | |
| CACCACAAGTGGTCATATTA+AGG | - | chr5_1:15754153-15754172 | None:intergenic | 40.0% | |
| CTTAATATGACCACTTGTGG+TGG | + | chr5_1:15754151-15754170 | Msa0720040:CDS | 40.0% | |
| ACACCGTTAGAATCACAACT+AGG | + | chr5_1:15754209-15754228 | Msa0720040:CDS | 40.0% | |
| ACGAAGGAGATCAAAGACTT+TGG | - | chr5_1:15754311-15754330 | None:intergenic | 40.0% | |
| CAGATGGATGCACTTTCTAA+TGG | + | chr5_1:15754514-15754533 | Msa0720040:intron | 40.0% | |
| GAAGTGGCTCATATTGCTAA+CGG | + | chr5_1:15754550-15754569 | Msa0720040:CDS | 40.0% | |
| ! | TATTGCTAACGGATCACATC+CGG | + | chr5_1:15754561-15754580 | Msa0720040:CDS | 40.0% |
| TCCCTTCTTCGCATAAATGT+AGG | + | chr5_1:15754595-15754614 | Msa0720040:intron | 40.0% | |
| ! | GAAGAAGTGCAATGCATGAA+GGG | - | chr5_1:15754830-15754849 | None:intergenic | 40.0% |
| ! | AGGGTTTATGATAGTGCCAA+TGG | + | chr5_1:15754854-15754873 | Msa0720040:CDS | 40.0% |
| GCTGATACATCATCTGAACA+AGG | + | chr5_1:15754888-15754907 | Msa0720040:CDS | 40.0% | |
| TTGGCACTAGTAGTAGATGA+TGG | - | chr5_1:15754927-15754946 | None:intergenic | 40.0% | |
| ! | CTCAGGTTGTCTTCTTATCA+TGG | + | chr5_1:15754956-15754975 | Msa0720040:CDS | 40.0% |
| GAAAGGTTAAGCTTTGCAGA+AGG | - | chr5_1:15755008-15755027 | None:intergenic | 40.0% | |
| TGATTGCTGTGACACTTGAA+AGG | - | chr5_1:15755025-15755044 | None:intergenic | 40.0% | |
| !! | TTTGATGCAGGGTATTGCAA+AGG | - | chr5_1:15755055-15755074 | None:intergenic | 40.0% |
| AGCACCTTCAATTTGATGCA+GGG | - | chr5_1:15755066-15755085 | None:intergenic | 40.0% | |
| !! | CAAATTGAAGGTGCTCTTTG+TGG | + | chr5_1:15755071-15755090 | Msa0720040:CDS | 40.0% |
| GAGGGAACAATTTCAATGAC+TGG | - | chr5_1:15755178-15755197 | None:intergenic | 40.0% | |
| ! | AATTGTTCCCTCCTCTCTTT+TGG | + | chr5_1:15755186-15755205 | Msa0720040:three_prime_UTR | 40.0% |
| CCATAATCCAAAAGAGAGGA+GGG | - | chr5_1:15755196-15755215 | None:intergenic | 40.0% | |
| TCCATAATCCAAAAGAGAGG+AGG | - | chr5_1:15755197-15755216 | None:intergenic | 40.0% | |
| AGTAGTAAGGGAAGGAACAA+GGG | + | chr5_1:15755422-15755441 | Msa0720040:three_prime_UTR | 40.0% | |
| AGCGGGGAATTTAAGTATGT+GGG | + | chr5_1:15755477-15755496 | Msa0720040:three_prime_UTR | 40.0% | |
| !! | TGGTATTGATGTATGTGAGG+AGG | + | chr5_1:15755584-15755603 | Msa0720040:three_prime_UTR | 40.0% |
| !! | GGTATTGATGTATGTGAGGA+GGG | + | chr5_1:15755585-15755604 | Msa0720040:three_prime_UTR | 40.0% |
| CGACCTTACTAGAAAACCAA+AGG | - | chr5_1:15755649-15755668 | None:intergenic | 40.0% | |
| TCTCGTATGATTCGTGATGA+TGG | + | chr5_1:15755672-15755691 | Msa0720040:three_prime_UTR | 40.0% | |
| ATGGCCTCACTAGTTAGTTA+AGG | + | chr5_1:15755691-15755710 | Msa0720040:three_prime_UTR | 40.0% | |
| ACCACCTTAACTAACTAGTG+AGG | - | chr5_1:15755698-15755717 | None:intergenic | 40.0% | |
| ACTAGTTAGTTAAGGTGGTG+TGG | + | chr5_1:15755699-15755718 | Msa0720040:three_prime_UTR | 40.0% | |
| TTAGTTAAGGTGGTGTGGTT+CGG | + | chr5_1:15755704-15755723 | Msa0720040:three_prime_UTR | 40.0% | |
| CATCACACTGTCTCTTTGTG+TGG | + | chr5_1:15749383-15749402 | Msa0720040:five_prime_UTR | 45.0% | |
| AGGAAAGGGTTGAAAAGGCA+TGG | - | chr5_1:15749889-15749908 | None:intergenic | 45.0% | |
| TCAACCCTTTCCTTCTTCCA+TGG | + | chr5_1:15749896-15749915 | Msa0720040:CDS | 45.0% | |
| TGCTCGTCAGATCCAAGAAA+TGG | + | chr5_1:15750167-15750186 | Msa0720040:CDS | 45.0% | |
| GTGGTTTCAGTCCCAAATCA+TGG | - | chr5_1:15750562-15750581 | None:intergenic | 45.0% | |
| GAATCGTCGAACTCAGATGA+AGG | + | chr5_1:15750604-15750623 | Msa0720040:CDS | 45.0% | |
| ATACATGGCCCACCACAATT+AGG | - | chr5_1:15751383-15751402 | None:intergenic | 45.0% | |
| !! | TTGTGGTGGGCCATGTATAA+TGG | + | chr5_1:15751385-15751404 | Msa0720040:CDS | 45.0% |
| !! | TGTGGTGGGCCATGTATAAT+GGG | + | chr5_1:15751386-15751405 | Msa0720040:CDS | 45.0% |
| ! | ACACACATAAGTGGAGGTAC+CGG | + | chr5_1:15751520-15751539 | Msa0720040:intron | 45.0% |
| GCCGAAATGCCGAAATTGTT+AGG | - | chr5_1:15751573-15751592 | None:intergenic | 45.0% | |
| !!! | GGTCATGGAATTTTTTCCCG+TGG | - | chr5_1:15752379-15752398 | None:intergenic | 45.0% |
| !! | ATGATGGTGGTGCCATTGTT+TGG | - | chr5_1:15752512-15752531 | None:intergenic | 45.0% |
| ! | GATGGTGGCATAAGAGATGA+TGG | - | chr5_1:15752528-15752547 | None:intergenic | 45.0% |
| ATCTCTTATGCCACCATCAC+TGG | + | chr5_1:15752530-15752549 | Msa0720040:CDS | 45.0% | |
| ATGTCTAAGTCCAGTGATGG+TGG | - | chr5_1:15752543-15752562 | None:intergenic | 45.0% | |
| ! | ACAGGAATCATTTCGGTGCA+TGG | - | chr5_1:15752600-15752619 | None:intergenic | 45.0% |
| GAAGGTTCAGGTGGTAACAT+AGG | - | chr5_1:15752624-15752643 | None:intergenic | 45.0% | |
| CCACCCTCTTGAAAATGTGA+AGG | - | chr5_1:15752642-15752661 | None:intergenic | 45.0% | |
| !! | CCTTCACATTTTCAAGAGGG+TGG | + | chr5_1:15752639-15752658 | Msa0720040:CDS | 45.0% |
| GGAACTTGCAGCTTCTTCTA+TGG | + | chr5_1:15752698-15752717 | Msa0720040:CDS | 45.0% | |
| CTTGCCCTAGCAACAATTGT+TGG | - | chr5_1:15753065-15753084 | None:intergenic | 45.0% | |
| CACGTGTGTCAGTGTTATGT+TGG | - | chr5_1:15753306-15753325 | None:intergenic | 45.0% | |
| ! | GTCTCTCTAGTGGATACCAA+CGG | - | chr5_1:15753527-15753546 | None:intergenic | 45.0% |
| TGTCAACAAAATGCCGAGGA+AGG | + | chr5_1:15753563-15753582 | Msa0720040:CDS | 45.0% | |
| AGGAAAATCAACAATGGCCC+AGG | - | chr5_1:15753591-15753610 | None:intergenic | 45.0% | |
| CTTATCCCAAATACTGCAGG+AGG | + | chr5_1:15753642-15753661 | Msa0720040:CDS | 45.0% | |
| ! | TTTGGTGCACAACGTTGGTT+AGG | + | chr5_1:15753885-15753904 | Msa0720040:CDS | 45.0% |
| ! | GTTGGTTAGGAGTTTTGCAG+AGG | + | chr5_1:15753898-15753917 | Msa0720040:CDS | 45.0% |
| !! | CTGATATGTTTCTGGCCATG+AGG | - | chr5_1:15753944-15753963 | None:intergenic | 45.0% |
| GATTGCAGTGATACCTTCTC+CGG | + | chr5_1:15754075-15754094 | Msa0720040:intron | 45.0% | |
| GTGATTCTAACGGTGTCTTC+TGG | - | chr5_1:15754205-15754224 | None:intergenic | 45.0% | |
| ACTAGGAAAATCACTGAGCC+TGG | + | chr5_1:15754226-15754245 | Msa0720040:CDS | 45.0% | |
| AAGCCAAGTGGTTGAAACTG+CGG | - | chr5_1:15754275-15754294 | None:intergenic | 45.0% | |
| ATGAGGATAAGGAAGCCAAG+TGG | - | chr5_1:15754287-15754306 | None:intergenic | 45.0% | |
| TTTGTGGTACCTGAGATCTG+TGG | - | chr5_1:15754342-15754361 | None:intergenic | 45.0% | |
| ! | ATTGCTAACGGATCACATCC+GGG | + | chr5_1:15754562-15754581 | Msa0720040:CDS | 45.0% |
| AGAAGGGAAATGCAGTTTCC+CGG | - | chr5_1:15754583-15754602 | None:intergenic | 45.0% | |
| GAGAGTTGCACAGATCAATC+TGG | + | chr5_1:15754741-15754760 | Msa0720040:CDS | 45.0% | |
| CTTGTCCACTCATAGCTAGT+TGG | - | chr5_1:15754806-15754825 | None:intergenic | 45.0% | |
| ! | GGAAGAAGTGCAATGCATGA+AGG | - | chr5_1:15754831-15754850 | None:intergenic | 45.0% |
| TGCATTGCACTTCTTCCACA+AGG | + | chr5_1:15754834-15754853 | Msa0720040:CDS | 45.0% | |
| GCATTGCACTTCTTCCACAA+GGG | + | chr5_1:15754835-15754854 | Msa0720040:CDS | 45.0% | |
| GGCACTATCATAAACCCTTG+TGG | - | chr5_1:15754852-15754871 | None:intergenic | 45.0% | |
| ! | TCATCTGAACAAGGTGTCAC+AGG | + | chr5_1:15754897-15754916 | Msa0720040:CDS | 45.0% |
| ACAACCTGAGTTAGCAGCAT+TGG | - | chr5_1:15754946-15754965 | None:intergenic | 45.0% | |
| GAGCACCTTCAATTTGATGC+AGG | - | chr5_1:15755067-15755086 | None:intergenic | 45.0% | |
| !! | ATTGAAGGTGCTCTTTGTGG+CGG | + | chr5_1:15755074-15755093 | Msa0720040:CDS | 45.0% |
| ! | CCCTCCTCTCTTTTGGATTA+TGG | + | chr5_1:15755193-15755212 | Msa0720040:three_prime_UTR | 45.0% |
| GAGTAGTAAGGGAAGGAACA+AGG | + | chr5_1:15755421-15755440 | Msa0720040:three_prime_UTR | 45.0% | |
| GAGCGGGGAATTTAAGTATG+TGG | + | chr5_1:15755476-15755495 | Msa0720040:three_prime_UTR | 45.0% | |
| GCGGGGAATTTAAGTATGTG+GGG | + | chr5_1:15755478-15755497 | Msa0720040:three_prime_UTR | 45.0% | |
| ATGTATGTGAGGAGGGTAGA+GGG | + | chr5_1:15755592-15755611 | Msa0720040:three_prime_UTR | 45.0% | |
| AGCGCACCAGATAATACCTT+TGG | + | chr5_1:15755630-15755649 | Msa0720040:three_prime_UTR | 45.0% | |
| GCCTCACTAGTTAGTTAAGG+TGG | + | chr5_1:15755694-15755713 | Msa0720040:three_prime_UTR | 45.0% | |
| TAGTTAAGGTGGTGTGGTTC+GGG | + | chr5_1:15755705-15755724 | Msa0720040:three_prime_UTR | 45.0% | |
| AACCTTCTTCATGGTCCTGC+TGG | + | chr5_1:15749477-15749496 | Msa0720040:five_prime_UTR | 50.0% | |
| TACCAGCAGGACCATGAAGA+AGG | - | chr5_1:15749482-15749501 | None:intergenic | 50.0% | |
| AACCACGCCAGGTTAAGTTC+TGG | + | chr5_1:15750576-15750595 | Msa0720040:CDS | 50.0% | |
| AACCAGAACTTAACCTGGCG+TGG | - | chr5_1:15750581-15750600 | None:intergenic | 50.0% | |
| GAGACCACATGTGACAGGTA+AGG | - | chr5_1:15751006-15751025 | None:intergenic | 50.0% | |
| GTTTGGAGACCACATGTGAC+AGG | - | chr5_1:15751011-15751030 | None:intergenic | 50.0% | |
| GGCATCCGGCCTAACAATTT+CGG | + | chr5_1:15751561-15751580 | Msa0720040:intron | 50.0% | |
| TGGTCGTCCACTCCAAACAA+TGG | + | chr5_1:15752497-15752516 | Msa0720040:CDS | 50.0% | |
| ! | GGTGGCATAAGAGATGATGG+TGG | - | chr5_1:15752525-15752544 | None:intergenic | 50.0% |
| ! | GGCATTGGATCAAAGTGCCT+TGG | - | chr5_1:15752576-15752595 | None:intergenic | 50.0% |
| ! | ATTTCGGTGCATGGTGGCAT+TGG | - | chr5_1:15752591-15752610 | None:intergenic | 50.0% |
| ! | GGAATCATTTCGGTGCATGG+TGG | - | chr5_1:15752597-15752616 | None:intergenic | 50.0% |
| TCAGGTGGTAACATAGGGAC+AGG | - | chr5_1:15752618-15752637 | None:intergenic | 50.0% | |
| ! | GAACCGCTTTGGATTCGGAA+CGG | + | chr5_1:15752750-15752769 | Msa0720040:CDS | 50.0% |
| TTCGGAACGGCGAGAATGAT+AGG | + | chr5_1:15752763-15752782 | Msa0720040:CDS | 50.0% | |
| TCGGAACGGCGAGAATGATA+GGG | + | chr5_1:15752764-15752783 | Msa0720040:CDS | 50.0% | |
| AAAATGCCGAGGAAGGAACC+TGG | + | chr5_1:15753570-15753589 | Msa0720040:CDS | 50.0% | |
| AAATGCCGAGGAAGGAACCT+GGG | + | chr5_1:15753571-15753590 | Msa0720040:CDS | 50.0% | |
| GAGGACCTCCTGCAGTATTT+GGG | - | chr5_1:15753650-15753669 | None:intergenic | 50.0% | |
| AGAGGACCTCCTGCAGTATT+TGG | - | chr5_1:15753651-15753670 | None:intergenic | 50.0% | |
| AAATACTGCAGGAGGTCCTC+TGG | + | chr5_1:15753650-15753669 | Msa0720040:CDS | 50.0% | |
| GTCTTGAATGACACAGCCAG+AGG | - | chr5_1:15753669-15753688 | None:intergenic | 50.0% | |
| !! | TGGCATTTGGTGCACAACGT+TGG | + | chr5_1:15753880-15753899 | Msa0720040:CDS | 50.0% |
| TGAAAGGGTTGCAAGCCTCA+TGG | + | chr5_1:15753926-15753945 | Msa0720040:CDS | 50.0% | |
| CCATGATTGTCCACCACAAG+TGG | - | chr5_1:15754164-15754183 | None:intergenic | 50.0% | |
| !! | CCACTTGTGGTGGACAATCA+TGG | + | chr5_1:15754161-15754180 | Msa0720040:CDS | 50.0% |
| ! | CACTACGGTCGACGTTGATT+CGG | + | chr5_1:15754779-15754798 | Msa0720040:CDS | 50.0% |
| TCGGTCCAACTAGCTATGAG+TGG | + | chr5_1:15754798-15754817 | Msa0720040:CDS | 50.0% | |
| AGTGCCAATGCTGCTAACTC+AGG | + | chr5_1:15754939-15754958 | Msa0720040:CDS | 50.0% | |
| ! | AGGAGTGCACACTACTTGGA+GGG | - | chr5_1:15755152-15755171 | None:intergenic | 50.0% |
| ! | AAGGAGTGCACACTACTTGG+AGG | - | chr5_1:15755153-15755172 | None:intergenic | 50.0% |
| ! | GACAAGGAGTGCACACTACT+TGG | - | chr5_1:15755156-15755175 | None:intergenic | 50.0% |
| GATGTATGTGAGGAGGGTAG+AGG | + | chr5_1:15755591-15755610 | Msa0720040:three_prime_UTR | 50.0% | |
| ! | TTTGGGACTGAAACCACGCC+AGG | + | chr5_1:15750565-15750584 | Msa0720040:CDS | 55.0% |
| !! | GGTGGTGCCATTGTTTGGAG+TGG | - | chr5_1:15752507-15752526 | None:intergenic | 55.0% |
| TCGCCGTTCCGAATCCAAAG+CGG | - | chr5_1:15752756-15752775 | None:intergenic | 55.0% | |
| GTGCTTCTGGCCATGCAAGT+GGG | + | chr5_1:15753108-15753127 | Msa0720040:CDS | 55.0% | |
| GCTGAAGAGTCCCACTTGCA+TGG | - | chr5_1:15753121-15753140 | None:intergenic | 55.0% | |
| TGCAAGTGGGACTCTTCAGC+TGG | + | chr5_1:15753121-15753140 | Msa0720040:CDS | 55.0% | |
| AGTGGGACTCTTCAGCTGGT+AGG | + | chr5_1:15753125-15753144 | Msa0720040:intron | 55.0% | |
| AATGGCCCAGGTTCCTTCCT+CGG | - | chr5_1:15753579-15753598 | None:intergenic | 55.0% | |
| TGATACCTTCTCCGGAAGCG+CGG | + | chr5_1:15754083-15754102 | Msa0720040:CDS | 55.0% | |
| ATCAAGCTCTTCCGCGCTTC+CGG | - | chr5_1:15754097-15754116 | None:intergenic | 55.0% | |
| CGAGAATCACTCCACTGGGT+TGG | - | chr5_1:15754252-15754271 | None:intergenic | 55.0% | |
| TCGCCGCAGTTTCAACCACT+TGG | + | chr5_1:15754269-15754288 | Msa0720040:CDS | 55.0% | |
| ATCTGTGGCGTTCGTCACGA+AGG | - | chr5_1:15754327-15754346 | None:intergenic | 55.0% | |
| TGACGAACGCCACAGATCTC+AGG | + | chr5_1:15754330-15754349 | Msa0720040:CDS | 55.0% | |
| ! | TTGGAGGGTGCACTAGTGGT+TGG | - | chr5_1:15755137-15755156 | None:intergenic | 55.0% |
| ! | CTACTTGGAGGGTGCACTAG+TGG | - | chr5_1:15755141-15755160 | None:intergenic | 55.0% |
| TTAGGCCGGATGCCATGACC+GGG | - | chr5_1:15751555-15751574 | None:intergenic | 60.0% | |
| GTTAGGCCGGATGCCATGAC+CGG | - | chr5_1:15751556-15751575 | None:intergenic | 60.0% | |
| GGTGCTTCTGGCCATGCAAG+TGG | + | chr5_1:15753107-15753126 | Msa0720040:CDS | 60.0% | |
| !! | ATCACTCCACTGGGTTGGCC+AGG | - | chr5_1:15754247-15754266 | None:intergenic | 60.0% |
| GCGGCGAGAATCACTCCACT+GGG | - | chr5_1:15754256-15754275 | None:intergenic | 60.0% | |
| TGCGGCGAGAATCACTCCAC+TGG | - | chr5_1:15754257-15754276 | None:intergenic | 60.0% | |
| TGGTGCGCTCTTGACTCCCT+CGG | - | chr5_1:15755619-15755638 | None:intergenic | 60.0% | |
| !! | AGGTACCGGCGTTCGAACCC+CGG | + | chr5_1:15751534-15751553 | Msa0720040:intron | 65.0% |
| CATGACCGGGGTTCGAACGC+CGG | - | chr5_1:15751542-15751561 | None:intergenic | 65.0% | |
| CGAACCCCGGTCATGGCATC+CGG | + | chr5_1:15751547-15751566 | Msa0720040:intron | 65.0% | |
| TAGGCCGGATGCCATGACCG+GGG | - | chr5_1:15751554-15751573 | None:intergenic | 65.0% | |
| CTCTTCCGCGCTTCCGGAGA+AGG | - | chr5_1:15754091-15754110 | None:intergenic | 65.0% | |
| ACTGAGCCTGGCCAACCCAG+TGG | + | chr5_1:15754238-15754257 | Msa0720040:CDS | 65.0% | |
| TGAGGAGGGTAGAGGGACCG+AGG | + | chr5_1:15755599-15755618 | Msa0720040:three_prime_UTR | 65.0% | |
| GAGGAGGGTAGAGGGACCGA+GGG | + | chr5_1:15755600-15755619 | Msa0720040:three_prime_UTR | 65.0% | |
| CGGCGTTCGAACCCCGGTCA+TGG | + | chr5_1:15751540-15751559 | Msa0720040:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 15749361 | 15755740 | 15749361 | ID=Msa0720040;Name=Msa0720040 |
| chr5_1 | mRNA | 15749361 | 15755740 | 15749361 | ID=Msa0720040-mRNA-1;Parent=Msa0720040;Name=Msa0720040-mRNA-1;_AED=0.06;_eAED=0.06;_QI=212|0.90|0.75|1|0.90|0.83|12|580|802 |
| chr5_1 | exon | 15749361 | 15749498 | 15749361 | ID=Msa0720040-mRNA-1:exon:6053;Parent=Msa0720040-mRNA-1 |
| chr5_1 | exon | 15749703 | 15749917 | 15749703 | ID=Msa0720040-mRNA-1:exon:6054;Parent=Msa0720040-mRNA-1 |
| chr5_1 | exon | 15750018 | 15750193 | 15750018 | ID=Msa0720040-mRNA-1:exon:6055;Parent=Msa0720040-mRNA-1 |
| chr5_1 | exon | 15750508 | 15750625 | 15750508 | ID=Msa0720040-mRNA-1:exon:6056;Parent=Msa0720040-mRNA-1 |
| chr5_1 | exon | 15751278 | 15751469 | 15751278 | ID=Msa0720040-mRNA-1:exon:6057;Parent=Msa0720040-mRNA-1 |
| chr5_1 | exon | 15752462 | 15752932 | 15752462 | ID=Msa0720040-mRNA-1:exon:6058;Parent=Msa0720040-mRNA-1 |
| chr5_1 | exon | 15753041 | 15753142 | 15753041 | ID=Msa0720040-mRNA-1:exon:6059;Parent=Msa0720040-mRNA-1 |
| chr5_1 | exon | 15753497 | 15753709 | 15753497 | ID=Msa0720040-mRNA-1:exon:6060;Parent=Msa0720040-mRNA-1 |
| chr5_1 | exon | 15753804 | 15753972 | 15753804 | ID=Msa0720040-mRNA-1:exon:6061;Parent=Msa0720040-mRNA-1 |
| chr5_1 | exon | 15754083 | 15754351 | 15754083 | ID=Msa0720040-mRNA-1:exon:6062;Parent=Msa0720040-mRNA-1 |
| chr5_1 | exon | 15754517 | 15754612 | 15754517 | ID=Msa0720040-mRNA-1:exon:6063;Parent=Msa0720040-mRNA-1 |
| chr5_1 | exon | 15754699 | 15755740 | 15754699 | ID=Msa0720040-mRNA-1:exon:6064;Parent=Msa0720040-mRNA-1 |
| chr5_1 | five_prime_UTR | 15749361 | 15749498 | 15749361 | ID=Msa0720040-mRNA-1:five_prime_utr;Parent=Msa0720040-mRNA-1 |
| chr5_1 | five_prime_UTR | 15749703 | 15749776 | 15749703 | ID=Msa0720040-mRNA-1:five_prime_utr;Parent=Msa0720040-mRNA-1 |
| chr5_1 | CDS | 15749777 | 15749917 | 15749777 | ID=Msa0720040-mRNA-1:cds;Parent=Msa0720040-mRNA-1 |
| chr5_1 | CDS | 15750018 | 15750193 | 15750018 | ID=Msa0720040-mRNA-1:cds;Parent=Msa0720040-mRNA-1 |
| chr5_1 | CDS | 15750508 | 15750625 | 15750508 | ID=Msa0720040-mRNA-1:cds;Parent=Msa0720040-mRNA-1 |
| chr5_1 | CDS | 15751278 | 15751469 | 15751278 | ID=Msa0720040-mRNA-1:cds;Parent=Msa0720040-mRNA-1 |
| chr5_1 | CDS | 15752462 | 15752932 | 15752462 | ID=Msa0720040-mRNA-1:cds;Parent=Msa0720040-mRNA-1 |
| chr5_1 | CDS | 15753041 | 15753142 | 15753041 | ID=Msa0720040-mRNA-1:cds;Parent=Msa0720040-mRNA-1 |
| chr5_1 | CDS | 15753497 | 15753709 | 15753497 | ID=Msa0720040-mRNA-1:cds;Parent=Msa0720040-mRNA-1 |
| chr5_1 | CDS | 15753804 | 15753972 | 15753804 | ID=Msa0720040-mRNA-1:cds;Parent=Msa0720040-mRNA-1 |
| chr5_1 | CDS | 15754083 | 15754351 | 15754083 | ID=Msa0720040-mRNA-1:cds;Parent=Msa0720040-mRNA-1 |
| chr5_1 | CDS | 15754517 | 15754612 | 15754517 | ID=Msa0720040-mRNA-1:cds;Parent=Msa0720040-mRNA-1 |
| chr5_1 | CDS | 15754699 | 15755160 | 15754699 | ID=Msa0720040-mRNA-1:cds;Parent=Msa0720040-mRNA-1 |
| chr5_1 | three_prime_UTR | 15755161 | 15755740 | 15755161 | ID=Msa0720040-mRNA-1:three_prime_utr;Parent=Msa0720040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
