Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789120 | AFK45470.1 | 88.602 | 465 | 38 | 3 | 1 | 463 | 1 | 452 | 0.0 | 811 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789120 | sp|Q94C48|WDL5_ARATH | 47.703 | 283 | 137 | 7 | 83 | 360 | 70 | 346 | 8.74e-68 | 226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789120 | I3SYX8 | 88.602 | 465 | 38 | 3 | 1 | 463 | 1 | 452 | 0.0 | 811 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072520 | Msa0789120 | 0.810972 | 8.837521e-51 | -8.615850e-47 |
| Msa0612520 | Msa0789120 | 0.804555 | 2.042211e-49 | -8.615850e-47 |
| Msa0789120 | Msa1068400 | 0.812566 | 3.975042e-51 | -8.615850e-47 |
| Msa0789120 | Msa1076820 | 0.811712 | 6.102384e-51 | -8.615850e-47 |
| Msa0789120 | Msa1123200 | 0.805944 | 1.045140e-49 | -8.615850e-47 |
| Msa0789120 | Msa1228630 | 0.803132 | 4.033973e-49 | -8.615850e-47 |
| Msa0789120 | Msa1377530 | 0.802151 | 6.428808e-49 | -8.615850e-47 |
| Msa0789120 | Msa1406720 | 0.813286 | 2.763880e-51 | -8.615850e-47 |
| Msa0181880 | Msa0789120 | 0.823995 | 1.025914e-53 | -8.615850e-47 |
| Msa0432690 | Msa0789120 | 0.897007 | 2.134107e-76 | -8.615850e-47 |
| Msa0466520 | Msa0789120 | 0.805883 | 1.076717e-49 | -8.615850e-47 |
| Msa0513080 | Msa0789120 | 0.817615 | 3.008381e-52 | -8.615850e-47 |
| Msa0521320 | Msa0789120 | 0.873664 | 1.234117e-67 | -8.615850e-47 |
| Msa0564980 | Msa0789120 | 0.801907 | 7.215984e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789120 | MtrunA17_Chr3g0137761 | 88.841 | 466 | 36 | 3 | 1 | 463 | 1 | 453 | 0.0 | 809 |
| Msa0789120 | MtrunA17_Chr1g0149361 | 50.737 | 475 | 199 | 11 | 1 | 461 | 2 | 455 | 1.31e-132 | 390 |
| Msa0789120 | MtrunA17_Chr1g0176611 | 44.554 | 202 | 84 | 5 | 220 | 417 | 233 | 410 | 5.21e-38 | 144 |
| Msa0789120 | MtrunA17_Chr7g0267791 | 41.364 | 220 | 98 | 6 | 104 | 312 | 130 | 329 | 1.28e-36 | 139 |
| Msa0789120 | MtrunA17_Chr1g0187121 | 60.870 | 92 | 36 | 0 | 222 | 313 | 217 | 308 | 1.08e-28 | 116 |
| Msa0789120 | MtrunA17_Chr1g0190551 | 52.688 | 93 | 40 | 1 | 214 | 306 | 191 | 279 | 2.96e-21 | 95.1 |
| Msa0789120 | MtrunA17_Chr7g0274281 | 56.566 | 99 | 39 | 1 | 213 | 311 | 207 | 301 | 5.65e-21 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789120 | AT4G32330.2 | 47.518 | 282 | 138 | 6 | 83 | 360 | 70 | 345 | 5.09e-70 | 229 |
| Msa0789120 | AT4G32330.1 | 47.703 | 283 | 137 | 7 | 83 | 360 | 70 | 346 | 8.88e-69 | 226 |
| Msa0789120 | AT4G32330.4 | 47.703 | 283 | 137 | 7 | 83 | 360 | 70 | 346 | 8.88e-69 | 226 |
| Msa0789120 | AT4G32330.3 | 47.703 | 283 | 137 | 7 | 83 | 360 | 70 | 346 | 8.88e-69 | 226 |
| Msa0789120 | AT2G25480.1 | 45.679 | 243 | 128 | 3 | 135 | 376 | 99 | 338 | 1.82e-58 | 198 |
| Msa0789120 | AT2G25480.2 | 45.679 | 243 | 129 | 3 | 135 | 376 | 99 | 339 | 2.16e-58 | 197 |
| Msa0789120 | AT2G35880.3 | 72.816 | 103 | 27 | 1 | 211 | 313 | 236 | 337 | 7.68e-42 | 154 |
| Msa0789120 | AT2G35880.2 | 72.816 | 103 | 27 | 1 | 211 | 313 | 236 | 337 | 7.68e-42 | 154 |
| Msa0789120 | AT2G35880.1 | 72.816 | 103 | 27 | 1 | 211 | 313 | 236 | 337 | 7.68e-42 | 154 |
| Msa0789120 | AT3G23090.1 | 54.902 | 102 | 46 | 0 | 208 | 309 | 181 | 282 | 2.56e-25 | 106 |
| Msa0789120 | AT3G23090.5 | 54.902 | 102 | 46 | 0 | 208 | 309 | 182 | 283 | 2.73e-25 | 106 |
| Msa0789120 | AT3G23090.4 | 54.902 | 102 | 46 | 0 | 208 | 309 | 217 | 318 | 5.41e-25 | 106 |
| Msa0789120 | AT3G23090.2 | 52.830 | 106 | 46 | 1 | 208 | 309 | 181 | 286 | 1.94e-24 | 104 |
| Msa0789120 | AT3G23090.3 | 52.830 | 106 | 46 | 1 | 208 | 309 | 217 | 322 | 3.82e-24 | 103 |
| Msa0789120 | AT3G04630.3 | 52.747 | 91 | 41 | 1 | 218 | 306 | 126 | 216 | 1.46e-22 | 97.8 |
| Msa0789120 | AT5G28646.3 | 47.899 | 119 | 54 | 3 | 214 | 328 | 80 | 194 | 1.54e-22 | 95.5 |
| Msa0789120 | AT3G04630.1 | 52.747 | 91 | 41 | 1 | 218 | 306 | 122 | 212 | 1.54e-22 | 97.8 |
| Msa0789120 | AT3G04630.2 | 52.747 | 91 | 41 | 1 | 218 | 306 | 121 | 211 | 1.59e-22 | 97.8 |
| Msa0789120 | AT5G28646.2 | 47.899 | 119 | 54 | 3 | 214 | 328 | 84 | 198 | 1.83e-22 | 95.5 |
| Msa0789120 | AT5G28646.1 | 47.899 | 119 | 54 | 3 | 214 | 328 | 84 | 198 | 1.83e-22 | 95.5 |
| Msa0789120 | AT1G70950.1 | 69.841 | 63 | 19 | 0 | 221 | 283 | 328 | 390 | 1.94e-22 | 100 |
| Msa0789120 | AT1G54460.1 | 47.863 | 117 | 56 | 2 | 198 | 313 | 145 | 257 | 7.52e-22 | 96.7 |
Find 125 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAACATTCTCAAGAATTT+TGG | 0.132556 | 5_2:-76864035 | None:intergenic |
| GATCTTCTTTGTGGTTTCTT+TGG | 0.168066 | 5_2:-76863387 | None:intergenic |
| GTATGCAACACTTATCTATT+TGG | 0.185118 | 5_2:+76864001 | Msa0789120:three_prime_UTR |
| TTGGATGAACTGATCCTTTC+AGG | 0.194545 | 5_2:-76863429 | None:intergenic |
| AGACAAACCACAACTCATTT+TGG | 0.224152 | 5_2:+76863683 | Msa0789120:CDS |
| TGTGGTTTCTTTGGCTGAAC+AGG | 0.226403 | 5_2:-76863378 | None:intergenic |
| CCAAAATTCTTGAGAATGTT+TGG | 0.258230 | 5_2:+76864035 | Msa0789120:three_prime_UTR |
| GCCTCTTAATCTCAGCTTCC+TGG | 0.282090 | 5_2:-76861831 | None:intergenic |
| GAACCCCTTGATAATCTTCC+AGG | 0.318461 | 5_2:+76860946 | Msa0789120:CDS |
| TGTTTACTCCCAAAGCTTGC+TGG | 0.322251 | 5_2:+76863895 | Msa0789120:three_prime_UTR |
| ATGGAAGAACAAGGATTAAA+TGG | 0.328736 | 5_2:+76860237 | Msa0789120:CDS |
| GAAGTCATATGAAGACTTCT+AGG | 0.332240 | 5_2:-76860468 | None:intergenic |
| ACCAGGAGCCTACTCCTTCT+AGG | 0.337669 | 5_2:+76861899 | Msa0789120:CDS |
| GAACAAACACTACACCAAAA+TGG | 0.342296 | 5_2:+76860093 | Msa0789120:CDS |
| GTTGGGACAATGCCAACTTA+TGG | 0.342732 | 5_2:+76861504 | Msa0789120:CDS |
| TATCAATGATAATTTGTCTA+TGG | 0.352840 | 5_2:+76860218 | Msa0789120:CDS |
| AGTTGAAATCGTTGATGAAA+TGG | 0.373626 | 5_2:+76860389 | Msa0789120:CDS |
| AAACAAACTGCACTGTCTAA+TGG | 0.379381 | 5_2:+76860192 | Msa0789120:CDS |
| TGCTTAATGCTATCCTGCTA+TGG | 0.379385 | 5_2:-76863715 | None:intergenic |
| CTCGACAGCCGGTTAAGAAC+AGG | 0.385189 | 5_2:+76860577 | Msa0789120:CDS |
| TTGACTGCCCTGTTCTTAAC+CGG | 0.385934 | 5_2:-76860585 | None:intergenic |
| TAAATGAAGTTGAGGTTCAT+TGG | 0.387990 | 5_2:+76860000 | None:intergenic |
| CTTTCTCATCAAGACTTAAA+CGG | 0.397130 | 5_2:-76863323 | None:intergenic |
| TTCTTCAACTCCACCCTAGA+AGG | 0.399718 | 5_2:-76861913 | None:intergenic |
| TAAGTGTTGCATACCTCAAC+TGG | 0.402665 | 5_2:-76863992 | None:intergenic |
| AGTCCGTGCAGTTGCTGAAT+TGG | 0.411034 | 5_2:-76863448 | None:intergenic |
| AATTGAGATTCTGCTACATC+TGG | 0.413515 | 5_2:-76863639 | None:intergenic |
| GTTGTTGATGAACACCATTT+TGG | 0.414950 | 5_2:-76860107 | None:intergenic |
| CAAACAGCAGGAACATAATC+TGG | 0.419392 | 5_2:+76863736 | Msa0789120:three_prime_UTR |
| TGAAGCAGCTGCAGCTATTG+AGG | 0.421562 | 5_2:+76863563 | Msa0789120:CDS |
| GCTTAATGCTATCCTGCTAT+GGG | 0.424527 | 5_2:-76863714 | None:intergenic |
| AAGCTGAGATTAAGAGGCTT+AGG | 0.426472 | 5_2:+76861836 | Msa0789120:CDS |
| AACTGCACGGACTTCATCTA+AGG | 0.429060 | 5_2:+76863458 | Msa0789120:CDS |
| TTTGGTGTAGTGTTTGTTCA+AGG | 0.434141 | 5_2:-76860089 | None:intergenic |
| TTCAGTTGTTACACTAGATA+AGG | 0.435015 | 5_2:-76863502 | None:intergenic |
| TAATAATATAAATATTTGTC+AGG | 0.436033 | 5_2:+76863964 | Msa0789120:three_prime_UTR |
| GGAGGGAGAGATCTTCTTTG+TGG | 0.439601 | 5_2:-76863396 | None:intergenic |
| ACAACTGTTTAATTCAGAAC+AGG | 0.442289 | 5_2:+76860128 | Msa0789120:CDS |
| TGTCCCAACTCTACGAGGTT+TGG | 0.442849 | 5_2:-76861490 | None:intergenic |
| TTTCTCTTCCCTTGTTGCAA+TGG | 0.452310 | 5_2:-76863538 | None:intergenic |
| TTGATGAAATGGAGAAATCT+AGG | 0.454744 | 5_2:+76860400 | Msa0789120:CDS |
| AGGATTAAATGGCAAAATAG+AGG | 0.462425 | 5_2:+76860248 | Msa0789120:CDS |
| GTAGCATCTTCTGTTTCAAA+TGG | 0.464133 | 5_2:+76860531 | Msa0789120:CDS |
| TTCTATATAACTTGCAGCGT+TGG | 0.464502 | 5_2:+76860023 | Msa0789120:five_prime_UTR |
| GCCAGGAAGCTGAGATTAAG+AGG | 0.465254 | 5_2:+76861830 | Msa0789120:CDS |
| AACAGGGCTAATTCCTTTAG+TGG | 0.473778 | 5_2:-76863361 | None:intergenic |
| TTCTAGGGTGGAGTTGAAGA+AGG | 0.474020 | 5_2:+76861915 | Msa0789120:CDS |
| CTGAGATTATTTGACAATGA+AGG | 0.476122 | 5_2:+76863812 | Msa0789120:three_prime_UTR |
| ACTCTTCTTACGACCAAGCT+TGG | 0.479893 | 5_2:-76863247 | None:intergenic |
| GGATTCAGTTAACACTTCAC+TGG | 0.481211 | 5_2:+76860056 | Msa0789120:CDS |
| CTCTTCTTACGACCAAGCTT+GGG | 0.483203 | 5_2:-76863246 | None:intergenic |
| ACATGTGGATATGTTGCTAT+AGG | 0.488864 | 5_2:-76864236 | None:intergenic |
| ATGCCAAACCTCGTAGAGTT+GGG | 0.490023 | 5_2:+76861487 | Msa0789120:CDS |
| ACAGGGCTAATTCCTTTAGT+GGG | 0.491541 | 5_2:-76863360 | None:intergenic |
| TTCCCTTGTTGCAATGGACA+AGG | 0.498349 | 5_2:-76863532 | None:intergenic |
| CCAGGAGCCTACTCCTTCTA+GGG | 0.502058 | 5_2:+76861900 | Msa0789120:CDS |
| GGTTTGGCATCTTCTGATGT+AGG | 0.503553 | 5_2:-76861474 | None:intergenic |
| TTGAAACTGAATCCATAAGT+TGG | 0.507092 | 5_2:-76861516 | None:intergenic |
| GCATTGCTCTGTTAAACAGT+TGG | 0.507693 | 5_2:+76864087 | Msa0789120:three_prime_UTR |
| TTGTCAGGTTGTTCCAGTTG+AGG | 0.512174 | 5_2:+76863979 | Msa0789120:three_prime_UTR |
| GTGGTTTCTTTGGCTGAACA+GGG | 0.512858 | 5_2:-76863377 | None:intergenic |
| GATGCCAAACCTCGTAGAGT+TGG | 0.513113 | 5_2:+76861486 | Msa0789120:CDS |
| TCCTGGTAGAAGCTTGGCAT+TGG | 0.514744 | 5_2:-76861883 | None:intergenic |
| ATATGAAGACTTCTAGGACT+TGG | 0.516716 | 5_2:-76860462 | None:intergenic |
| TCTCAGAATAACCCCACTAA+AGG | 0.516819 | 5_2:+76863348 | Msa0789120:CDS |
| TCCAATGCCAAGCTTCTACC+AGG | 0.517321 | 5_2:+76861882 | Msa0789120:CDS |
| CCCTAGAAGGAGTAGGCTCC+TGG | 0.521015 | 5_2:-76861900 | None:intergenic |
| AAGGATTCATGCGAAGGAAG+TGG | 0.521232 | 5_2:+76861685 | Msa0789120:CDS |
| AAAACATAATGCAAATATGC+AGG | 0.523599 | 5_2:-76863835 | None:intergenic |
| TACTTATTTGATTGCCTGTG+TGG | 0.527236 | 5_2:-76864260 | None:intergenic |
| AGACTCTCATCCTCGACAGC+CGG | 0.534706 | 5_2:+76860566 | Msa0789120:CDS |
| AATGCCTAAACAAAATGTAA+TGG | 0.535556 | 5_2:-76864069 | None:intergenic |
| ACAAAAGATACAATGCTGCT+TGG | 0.538614 | 5_2:-76863873 | None:intergenic |
| TTGGTACAAGAACCCATAGC+AGG | 0.540838 | 5_2:+76863702 | Msa0789120:CDS |
| AGAAAGAACAAAGACGGAAA+AGG | 0.541738 | 5_2:+76860495 | Msa0789120:CDS |
| CACCTTGTCCATTGCAACAA+GGG | 0.541747 | 5_2:+76863530 | Msa0789120:CDS |
| TAAATTAGCTGTTTGTGTTG+TGG | 0.542238 | 5_2:+76864121 | Msa0789120:three_prime_UTR |
| TCTGGCTCTATGTTCTGAGA+TGG | 0.545911 | 5_2:-76863621 | None:intergenic |
| CTGCAAGGAGGAGAATCATA+AGG | 0.546424 | 5_2:-76863925 | None:intergenic |
| GTAGCAGAATCTCAATTGAA+TGG | 0.549239 | 5_2:+76863645 | Msa0789120:CDS |
| CTGTTCTTAACCGGCTGTCG+AGG | 0.550219 | 5_2:-76860576 | None:intergenic |
| GCGAGCTGAGAGAAGAAAAG+AGG | 0.553578 | 5_2:+76861548 | Msa0789120:CDS |
| AGAGCAAAATCTCCCAAGCT+TGG | 0.555915 | 5_2:+76863234 | Msa0789120:CDS |
| GTAGGCTCCTGGTAGAAGCT+TGG | 0.558222 | 5_2:-76861889 | None:intergenic |
| TCTTGTACCAAAATGAGTTG+TGG | 0.564689 | 5_2:-76863690 | None:intergenic |
| CCACCTTGTCCATTGCAACA+AGG | 0.567508 | 5_2:+76863529 | Msa0789120:CDS |
| GATAGCATTAAGCAAACAGC+AGG | 0.572590 | 5_2:+76863724 | Msa0789120:exon |
| TTGAGAATGTTTGGCATCAG+CGG | 0.578959 | 5_2:+76864044 | Msa0789120:three_prime_UTR |
| GGTTCTTTCTTTATTAAGCG+TGG | 0.580191 | 5_2:-76860928 | None:intergenic |
| CAAGCAGACTCGACTGTCCA+AGG | 0.582646 | 5_2:+76860611 | Msa0789120:CDS |
| GGATTAAATGGCAAAATAGA+GGG | 0.583012 | 5_2:+76860249 | Msa0789120:CDS |
| AACACTTCACTGGAAGATGA+TGG | 0.583650 | 5_2:+76860066 | Msa0789120:CDS |
| TTTACTCTAAGCTTGAGGAA+AGG | 0.592432 | 5_2:+76861666 | Msa0789120:CDS |
| CGGAAAAGGTGAAGAGGCTG+CGG | 0.593404 | 5_2:+76860509 | Msa0789120:CDS |
| CTCCTCGACTGACTCCTGAA+AGG | 0.594114 | 5_2:+76863415 | Msa0789120:CDS |
| TGTAATACGACTAATCAGAA+TGG | 0.595287 | 5_2:-76864147 | None:intergenic |
| AGTTGTTACACTAGATAAGG+AGG | 0.597207 | 5_2:-76863499 | None:intergenic |
| TAGAAGTCTTCATATGACTT+CGG | 0.599550 | 5_2:+76860470 | Msa0789120:CDS |
| TGAGGAAAGGATTCATGCGA+AGG | 0.601101 | 5_2:+76861679 | Msa0789120:CDS |
| CTTTCAGGAGTCAGTCGAGG+AGG | 0.604733 | 5_2:-76863414 | None:intergenic |
| TTTCAGGAGTCAGTCGAGGA+GGG | 0.609189 | 5_2:-76863413 | None:intergenic |
| TGCAGCGTTGGTGTAAACGA+TGG | 0.614185 | 5_2:+76860035 | Msa0789120:exon |
| CAAAGACGGAAAAGGTGAAG+AGG | 0.614474 | 5_2:+76860503 | Msa0789120:CDS |
| TCGAGGATGAGAGTCTAAAG+TGG | 0.615745 | 5_2:-76860559 | None:intergenic |
| CAGGGCTAATTCCTTTAGTG+GGG | 0.617483 | 5_2:-76863359 | None:intergenic |
| TCGACAGCCGGTTAAGAACA+GGG | 0.621749 | 5_2:+76860578 | Msa0789120:CDS |
| GATTCATGCGAAGGAAGTGG+AGG | 0.623695 | 5_2:+76861688 | Msa0789120:CDS |
| AACTCCACCCTAGAAGGAGT+AGG | 0.629124 | 5_2:-76861907 | None:intergenic |
| GATTGCCTGTGTGGAACATG+TGG | 0.635575 | 5_2:-76864251 | None:intergenic |
| TCGGTGAGAAAGAACAAAGA+CGG | 0.640205 | 5_2:+76860489 | Msa0789120:CDS |
| CATCCAATTCAGCAACTGCA+CGG | 0.641669 | 5_2:+76863445 | Msa0789120:CDS |
| GCCTTGTCTGATGAGACAAG+TGG | 0.643159 | 5_2:+76863594 | Msa0789120:CDS |
| TATTACATATAATTGCTGCA+AGG | 0.643725 | 5_2:-76863940 | None:intergenic |
| ATCCTTTCAGGAGTCAGTCG+AGG | 0.644922 | 5_2:-76863417 | None:intergenic |
| TCCACTTGTCTCATCAGACA+AGG | 0.648448 | 5_2:-76863595 | None:intergenic |
| GGAGCCTACTCCTTCTAGGG+TGG | 0.650646 | 5_2:+76861903 | Msa0789120:CDS |
| TACATATAATTGCTGCAAGG+AGG | 0.654039 | 5_2:-76863937 | None:intergenic |
| GGCATTGTCCCAACTCTACG+AGG | 0.655109 | 5_2:-76861495 | None:intergenic |
| CTGTTTAATTCAGAACAGGA+TGG | 0.660275 | 5_2:+76860132 | Msa0789120:CDS |
| ATGTTGCTATAGGATACAGT+AGG | 0.662414 | 5_2:-76864226 | None:intergenic |
| CCTTGTTGCAATGGACAAGG+TGG | 0.666267 | 5_2:-76863529 | None:intergenic |
| TGCACGGACTTCATCTAAGG+CGG | 0.675302 | 5_2:+76863461 | Msa0789120:CDS |
| TTTCCTGGAAGATTATCAAG+GGG | 0.677776 | 5_2:-76860949 | None:intergenic |
| CATATCCACATGTTCCACAC+AGG | 0.693283 | 5_2:+76864246 | Msa0789120:three_prime_UTR |
| AATTTGTCTATGGAAGAACA+AGG | 0.717987 | 5_2:+76860228 | Msa0789120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTATTTTGAAATTATTAT+AGG | + | chr5_2:76860359-76860378 | Msa0789120:intron | 10.0% |
| !! | AGAATAAAAACAATAAAAAA+AGG | - | chr5_2:76860994-76861013 | None:intergenic | 10.0% |
| !! | TAATAATATAAATATTTGTC+AGG | + | chr5_2:76863964-76863983 | Msa0789120:three_prime_UTR | 10.0% |
| !! | TAATAATTTCAAAATACATG+AGG | - | chr5_2:76860358-76860377 | None:intergenic | 15.0% |
| !!! | AATTTTTAAAATTAGAGAGA+AGG | + | chr5_2:76861333-76861352 | Msa0789120:intron | 15.0% |
| !!! | ATTTTTAAAATTAGAGAGAA+GGG | + | chr5_2:76861334-76861353 | Msa0789120:intron | 15.0% |
| !!! | TGTAAATTAGTTTACAATTA+TGG | + | chr5_2:76861419-76861438 | Msa0789120:intron | 15.0% |
| !! | AGATCAATAATATAATATGA+AGG | - | chr5_2:76863002-76863021 | None:intergenic | 15.0% |
| !!! | TATCAATGATAATTTGTCTA+TGG | + | chr5_2:76860218-76860237 | Msa0789120:CDS | 20.0% |
| !!! | AAACAATGTTAATGTTTTCA+AGG | + | chr5_2:76860272-76860291 | Msa0789120:CDS | 20.0% |
| !!! | TTTGAAATTATTATAGGATG+AGG | + | chr5_2:76860365-76860384 | Msa0789120:intron | 20.0% |
| !!! | AGTTTCTTCTTTAATCTTTT+TGG | + | chr5_2:76860699-76860718 | Msa0789120:intron | 20.0% |
| !! | TGTAATGAAAATTATAGTGT+TGG | + | chr5_2:76860725-76860744 | Msa0789120:intron | 20.0% |
| !! | ATATCACAATAGTAAGTTTA+TGG | + | chr5_2:76861054-76861073 | Msa0789120:intron | 20.0% |
| !! | TATCACAATAGTAAGTTTAT+GGG | + | chr5_2:76861055-76861074 | Msa0789120:intron | 20.0% |
| !! | AATTTGAACAAACATTGTTA+GGG | - | chr5_2:76861266-76861285 | None:intergenic | 20.0% |
| !! | TAATTTGAACAAACATTGTT+AGG | - | chr5_2:76861267-76861286 | None:intergenic | 20.0% |
| !! | AGTTTACAATTATGGTTTAA+TGG | + | chr5_2:76861427-76861446 | Msa0789120:intron | 20.0% |
| !!! | GTCTAAAAAAGTTCATATTT+TGG | + | chr5_2:76861635-76861654 | Msa0789120:intron | 20.0% |
| !!! | TAAAAAAGTTCATATTTTGG+TGG | + | chr5_2:76861638-76861657 | Msa0789120:intron | 20.0% |
| !! | ATATATTATGATTATCACCT+TGG | - | chr5_2:76861735-76861754 | None:intergenic | 20.0% |
| !! | AATCATAATATATGATAGCT+AGG | + | chr5_2:76861742-76861761 | Msa0789120:intron | 20.0% |
| !! | TTCCTATAAAAAGAAATCAA+AGG | - | chr5_2:76861809-76861828 | None:intergenic | 20.0% |
| !!! | GTAATCTGTCTAATTATTTT+CGG | + | chr5_2:76862003-76862022 | Msa0789120:intron | 20.0% |
| !!! | TTTTCGGTTTTTTTAACTAT+AGG | + | chr5_2:76862019-76862038 | Msa0789120:intron | 20.0% |
| !! | AACTATGATTTCAATTTGAA+TGG | + | chr5_2:76862374-76862393 | Msa0789120:intron | 20.0% |
| !! | AAAACACAAACCAAATTTAA+AGG | - | chr5_2:76862492-76862511 | None:intergenic | 20.0% |
| !!! | TATCTGATTCTAAAAATGAA+TGG | + | chr5_2:76862584-76862603 | Msa0789120:intron | 20.0% |
| !!! | TTAGATTTCAAAATTTGTTC+AGG | - | chr5_2:76862941-76862960 | None:intergenic | 20.0% |
| !! | TAAACAACAAAGTTTTACCT+TGG | - | chr5_2:76860631-76860650 | None:intergenic | 25.0% |
| !!! | TAAAACTTTGTTGTTTACAC+AGG | + | chr5_2:76860634-76860653 | Msa0789120:intron | 25.0% |
| ! | AAAGATTAAAGAAGAAACTG+AGG | - | chr5_2:76860698-76860717 | None:intergenic | 25.0% |
| ! | ATGCAAATTGTTTCATACAT+TGG | - | chr5_2:76860822-76860841 | None:intergenic | 25.0% |
| ! | ATTGCAACTTATTGAATACA+GGG | + | chr5_2:76860894-76860913 | Msa0789120:intron | 25.0% |
| ! | AATATCATTCAAGCATCTAA+GGG | - | chr5_2:76861093-76861112 | None:intergenic | 25.0% |
| ! | AAATATCATTCAAGCATCTA+AGG | - | chr5_2:76861094-76861113 | None:intergenic | 25.0% |
| ! | TTTAACTCAATAAGCTTCTT+AGG | + | chr5_2:76861156-76861175 | Msa0789120:intron | 25.0% |
| ! | TTAACTCAATAAGCTTCTTA+GGG | + | chr5_2:76861157-76861176 | Msa0789120:intron | 25.0% |
| ! | TGTGATTTATGCATATCTTA+TGG | + | chr5_2:76861360-76861379 | Msa0789120:intron | 25.0% |
| ! | GTGATTTATGCATATCTTAT+GGG | + | chr5_2:76861361-76861380 | Msa0789120:intron | 25.0% |
| !!! | TAGGACTTATAAATGGATTA+AGG | - | chr5_2:76861458-76861477 | None:intergenic | 25.0% |
| !!! | GACCTTTGATTTCTTTTTAT+AGG | + | chr5_2:76861804-76861823 | Msa0789120:intron | 25.0% |
| ! | TTTCTGTTTACGTACATATA+GGG | + | chr5_2:76861942-76861961 | Msa0789120:intron | 25.0% |
| ! | GAATGAGTTTATATAATGAG+TGG | - | chr5_2:76862267-76862286 | None:intergenic | 25.0% |
| !! | GATATTTAAAGTTAGCTAGT+TGG | + | chr5_2:76862768-76862787 | Msa0789120:intron | 25.0% |
| ! | ATTGCTGTATAAATACAACT+GGG | - | chr5_2:76862856-76862875 | None:intergenic | 25.0% |
| !!! | TACACCAGTTGATATTTTTA+TGG | + | chr5_2:76862973-76862992 | Msa0789120:intron | 25.0% |
| !!! | ACACCAGTTGATATTTTTAT+GGG | + | chr5_2:76862974-76862993 | Msa0789120:intron | 25.0% |
| ! | AAAACATAATGCAAATATGC+AGG | - | chr5_2:76863838-76863857 | None:intergenic | 25.0% |
| ! | TATTACATATAATTGCTGCA+AGG | - | chr5_2:76863943-76863962 | None:intergenic | 25.0% |
| ! | AATGCCTAAACAAAATGTAA+TGG | - | chr5_2:76864072-76864091 | None:intergenic | 25.0% |
| ACAACTGTTTAATTCAGAAC+AGG | + | chr5_2:76860128-76860147 | Msa0789120:CDS | 30.0% | |
| AATTTGTCTATGGAAGAACA+AGG | + | chr5_2:76860228-76860247 | Msa0789120:CDS | 30.0% | |
| ATGGAAGAACAAGGATTAAA+TGG | + | chr5_2:76860237-76860256 | Msa0789120:CDS | 30.0% | |
| AGGATTAAATGGCAAAATAG+AGG | + | chr5_2:76860248-76860267 | Msa0789120:CDS | 30.0% | |
| GGATTAAATGGCAAAATAGA+GGG | + | chr5_2:76860249-76860268 | Msa0789120:CDS | 30.0% | |
| ! | AGTTGAAATCGTTGATGAAA+TGG | + | chr5_2:76860389-76860408 | Msa0789120:CDS | 30.0% |
| TTGATGAAATGGAGAAATCT+AGG | + | chr5_2:76860400-76860419 | Msa0789120:CDS | 30.0% | |
| TAGAAGTCTTCATATGACTT+CGG | + | chr5_2:76860470-76860489 | Msa0789120:CDS | 30.0% | |
| GATTGCAACTTATTGAATAC+AGG | + | chr5_2:76860893-76860912 | Msa0789120:intron | 30.0% | |
| ! | TTTTCCTGGAAGATTATCAA+GGG | - | chr5_2:76860953-76860972 | None:intergenic | 30.0% |
| TTATTCTTCTTACTTGTGAG+TGG | + | chr5_2:76861007-76861026 | Msa0789120:intron | 30.0% | |
| ! | TGCTTGAATGATATTTTCTG+TGG | + | chr5_2:76861098-76861117 | Msa0789120:intron | 30.0% |
| AGGTCATCTATAAAATGACA+AGG | + | chr5_2:76861227-76861246 | Msa0789120:intron | 30.0% | |
| ATTTATGCATATCTTATGGG+AGG | + | chr5_2:76861364-76861383 | Msa0789120:intron | 30.0% | |
| TTTATGCATATCTTATGGGA+GGG | + | chr5_2:76861365-76861384 | Msa0789120:intron | 30.0% | |
| TCTGATGTAGGACTTATAAA+TGG | - | chr5_2:76861465-76861484 | None:intergenic | 30.0% | |
| TTGAAACTGAATCCATAAGT+TGG | - | chr5_2:76861519-76861538 | None:intergenic | 30.0% | |
| TTTCCTTTGAATAAGCTTGT+AGG | + | chr5_2:76861613-76861632 | Msa0789120:intron | 30.0% | |
| ! | TTTCTTTTTATAGGAAAGCC+AGG | + | chr5_2:76861813-76861832 | Msa0789120:intron | 30.0% |
| GTTTCTGTTTACGTACATAT+AGG | + | chr5_2:76861941-76861960 | Msa0789120:intron | 30.0% | |
| ! | ATAGGCAATGTATTTTCTGT+TGG | + | chr5_2:76862037-76862056 | Msa0789120:intron | 30.0% |
| ATTCCATGGTTAAGAATGAT+AGG | + | chr5_2:76862238-76862257 | Msa0789120:intron | 30.0% | |
| ! | TTTTCCACTTATCTAGACAT+AGG | + | chr5_2:76862630-76862649 | Msa0789120:intron | 30.0% |
| !!! | CATTTAATCTGGTTTTACTC+TGG | + | chr5_2:76862667-76862686 | Msa0789120:intron | 30.0% |
| CTTTAAATATCTCCTCTAAC+TGG | - | chr5_2:76862759-76862778 | None:intergenic | 30.0% | |
| TTGCTGTATAAATACAACTG+GGG | - | chr5_2:76862855-76862874 | None:intergenic | 30.0% | |
| GATTGCTGTATAAATACAAC+TGG | - | chr5_2:76862857-76862876 | None:intergenic | 30.0% | |
| !!! | CATTTTGATTAGATCTGCAT+AGG | - | chr5_2:76862879-76862898 | None:intergenic | 30.0% |
| ATTGTAATTGCTCAAGAACT+TGG | + | chr5_2:76862914-76862933 | Msa0789120:intron | 30.0% | |
| TTGTAATTGCTCAAGAACTT+GGG | + | chr5_2:76862915-76862934 | Msa0789120:intron | 30.0% | |
| !! | TAGAAAGTGATTCTAAAACC+TGG | + | chr5_2:76863034-76863053 | Msa0789120:intron | 30.0% |
| AACTTTGTTGAAAGAAAACC+AGG | - | chr5_2:76863055-76863074 | None:intergenic | 30.0% | |
| ! | TGCTGTTTAAACTTGTCATT+AGG | + | chr5_2:76863090-76863109 | Msa0789120:intron | 30.0% |
| TGCTAACTCAAAAAAGTTCA+TGG | - | chr5_2:76863146-76863165 | None:intergenic | 30.0% | |
| AATTGAAATCCTTGAGCATT+TGG | + | chr5_2:76863185-76863204 | Msa0789120:intron | 30.0% | |
| CTTTCTCATCAAGACTTAAA+CGG | - | chr5_2:76863326-76863345 | None:intergenic | 30.0% | |
| TTCAGTTGTTACACTAGATA+AGG | - | chr5_2:76863505-76863524 | None:intergenic | 30.0% | |
| CTGAGATTATTTGACAATGA+AGG | + | chr5_2:76863812-76863831 | Msa0789120:three_prime_UTR | 30.0% | |
| GTATGCAACACTTATCTATT+TGG | + | chr5_2:76864001-76864020 | Msa0789120:three_prime_UTR | 30.0% | |
| ! | CCAAACATTCTCAAGAATTT+TGG | - | chr5_2:76864038-76864057 | None:intergenic | 30.0% |
| CCAAAATTCTTGAGAATGTT+TGG | + | chr5_2:76864035-76864054 | Msa0789120:three_prime_UTR | 30.0% | |
| !! | GGTTCCATTACATTTTGTTT+AGG | + | chr5_2:76864065-76864084 | Msa0789120:three_prime_UTR | 30.0% |
| TAAATTAGCTGTTTGTGTTG+TGG | + | chr5_2:76864121-76864140 | Msa0789120:three_prime_UTR | 30.0% | |
| TGTAATACGACTAATCAGAA+TGG | - | chr5_2:76864150-76864169 | None:intergenic | 30.0% | |
| ! | TTCTATATAACTTGCAGCGT+TGG | + | chr5_2:76860023-76860042 | Msa0789120:five_prime_UTR | 35.0% |
| ! | TTTGGTGTAGTGTTTGTTCA+AGG | - | chr5_2:76860092-76860111 | None:intergenic | 35.0% |
| GAACAAACACTACACCAAAA+TGG | + | chr5_2:76860093-76860112 | Msa0789120:CDS | 35.0% | |
| !! | GTTGTTGATGAACACCATTT+TGG | - | chr5_2:76860110-76860129 | None:intergenic | 35.0% |
| CTGTTTAATTCAGAACAGGA+TGG | + | chr5_2:76860132-76860151 | Msa0789120:CDS | 35.0% | |
| AAACAAACTGCACTGTCTAA+TGG | + | chr5_2:76860192-76860211 | Msa0789120:CDS | 35.0% | |
| ! | GGAGAAATCTAGGACAAAAA+AGG | + | chr5_2:76860410-76860429 | Msa0789120:CDS | 35.0% |
| !! | ATATGAAGACTTCTAGGACT+TGG | - | chr5_2:76860465-76860484 | None:intergenic | 35.0% |
| GAAGTCATATGAAGACTTCT+AGG | - | chr5_2:76860471-76860490 | None:intergenic | 35.0% | |
| AGAAAGAACAAAGACGGAAA+AGG | + | chr5_2:76860495-76860514 | Msa0789120:CDS | 35.0% | |
| GTAGCATCTTCTGTTTCAAA+TGG | + | chr5_2:76860531-76860550 | Msa0789120:CDS | 35.0% | |
| ! | TACATTTTCTTTCAGCACTC+TGG | + | chr5_2:76860768-76860787 | Msa0789120:intron | 35.0% |
| GGTTCTTTCTTTATTAAGCG+TGG | - | chr5_2:76860931-76860950 | None:intergenic | 35.0% | |
| TTTCCTGGAAGATTATCAAG+GGG | - | chr5_2:76860952-76860971 | None:intergenic | 35.0% | |
| ! | CTTTTCCTGGAAGATTATCA+AGG | - | chr5_2:76860954-76860973 | None:intergenic | 35.0% |
| ATGACCTACAATTAGCAGAA+GGG | - | chr5_2:76861214-76861233 | None:intergenic | 35.0% | |
| TTATGCATATCTTATGGGAG+GGG | + | chr5_2:76861366-76861385 | Msa0789120:intron | 35.0% | |
| ATTATTACTTGCTTCTCCCT+TGG | + | chr5_2:76861577-76861596 | Msa0789120:intron | 35.0% | |
| TTATTCAAAGGAAACCCTCA+TGG | - | chr5_2:76861607-76861626 | None:intergenic | 35.0% | |
| AGACCTACAAGCTTATTCAA+AGG | - | chr5_2:76861619-76861638 | None:intergenic | 35.0% | |
| TTTACTCTAAGCTTGAGGAA+AGG | + | chr5_2:76861666-76861685 | Msa0789120:CDS | 35.0% | |
| CAACATTCAAGCAAAAACCA+AGG | + | chr5_2:76861715-76861734 | Msa0789120:CDS | 35.0% | |
| ATTAGACAGATTACACACAG+CGG | - | chr5_2:76861997-76862016 | None:intergenic | 35.0% | |
| TTCCACTTCACTCTATCAAT+TGG | + | chr5_2:76862179-76862198 | Msa0789120:intron | 35.0% | |
| !! | GCTTGTTCTGAAATATTCCA+TGG | + | chr5_2:76862224-76862243 | Msa0789120:intron | 35.0% |
| AGACCTATCATTCTTAACCA+TGG | - | chr5_2:76862244-76862263 | None:intergenic | 35.0% | |
| AGATGGATATCAATGAAAGC+GGG | - | chr5_2:76862465-76862484 | None:intergenic | 35.0% | |
| CAGATGGATATCAATGAAAG+CGG | - | chr5_2:76862466-76862485 | None:intergenic | 35.0% | |
| CCAAATTTAAAGGTTCCAGA+TGG | - | chr5_2:76862482-76862501 | None:intergenic | 35.0% | |
| ! | CCATCTGGAACCTTTAAATT+TGG | + | chr5_2:76862479-76862498 | Msa0789120:intron | 35.0% |
| GTGGTAAAGTGCATTTAATC+TGG | + | chr5_2:76862656-76862675 | Msa0789120:intron | 35.0% | |
| GCTCCCATAAAAATATCAAC+TGG | - | chr5_2:76862980-76862999 | None:intergenic | 35.0% | |
| GATCTTCTTTGTGGTTTCTT+TGG | - | chr5_2:76863390-76863409 | None:intergenic | 35.0% | |
| AGTTGTTACACTAGATAAGG+AGG | - | chr5_2:76863502-76863521 | None:intergenic | 35.0% | |
| AATTGAGATTCTGCTACATC+TGG | - | chr5_2:76863642-76863661 | None:intergenic | 35.0% | |
| GTAGCAGAATCTCAATTGAA+TGG | + | chr5_2:76863645-76863664 | Msa0789120:CDS | 35.0% | |
| ! | AGACAAACCACAACTCATTT+TGG | + | chr5_2:76863683-76863702 | Msa0789120:CDS | 35.0% |
| TCTTGTACCAAAATGAGTTG+TGG | - | chr5_2:76863693-76863712 | None:intergenic | 35.0% | |
| ACAAAAGATACAATGCTGCT+TGG | - | chr5_2:76863876-76863895 | None:intergenic | 35.0% | |
| TACATATAATTGCTGCAAGG+AGG | - | chr5_2:76863940-76863959 | None:intergenic | 35.0% | |
| ATGTTGCTATAGGATACAGT+AGG | - | chr5_2:76864229-76864248 | None:intergenic | 35.0% | |
| ACATGTGGATATGTTGCTAT+AGG | - | chr5_2:76864239-76864258 | None:intergenic | 35.0% | |
| TACTTATTTGATTGCCTGTG+TGG | - | chr5_2:76864263-76864282 | None:intergenic | 35.0% | |
| GGATTCAGTTAACACTTCAC+TGG | + | chr5_2:76860056-76860075 | Msa0789120:CDS | 40.0% | |
| AACACTTCACTGGAAGATGA+TGG | + | chr5_2:76860066-76860085 | Msa0789120:CDS | 40.0% | |
| TCGGTGAGAAAGAACAAAGA+CGG | + | chr5_2:76860489-76860508 | Msa0789120:CDS | 40.0% | |
| CCACACATCAAATAGTGAAG+AGG | - | chr5_2:76860874-76860893 | None:intergenic | 40.0% | |
| CCTCTTCACTATTTGATGTG+TGG | + | chr5_2:76860871-76860890 | Msa0789120:intron | 40.0% | |
| ! | GAAGATGATTCAGCTTTTCC+TGG | - | chr5_2:76860967-76860986 | None:intergenic | 40.0% |
| TAGCAGAAGGGTTCAAAATG+AGG | - | chr5_2:76861202-76861221 | None:intergenic | 40.0% | |
| TGAACCCTTCTGCTAATTGT+AGG | + | chr5_2:76861207-76861226 | Msa0789120:intron | 40.0% | |
| GATGACCTACAATTAGCAGA+AGG | - | chr5_2:76861215-76861234 | None:intergenic | 40.0% | |
| AAACCCTCATGGTAATCCAA+GGG | - | chr5_2:76861596-76861615 | None:intergenic | 40.0% | |
| CCTCAAGCTTAGAGTAAAAC+TGG | - | chr5_2:76861664-76861683 | None:intergenic | 40.0% | |
| ! | CCAGTTTTACTCTAAGCTTG+AGG | + | chr5_2:76861661-76861680 | Msa0789120:intron | 40.0% |
| GGTCGAGATGTGGTTAAAAA+AGG | - | chr5_2:76861788-76861807 | None:intergenic | 40.0% | |
| AGAAATCAAAGGTCGAGATG+TGG | - | chr5_2:76861798-76861817 | None:intergenic | 40.0% | |
| AAGCTGAGATTAAGAGGCTT+AGG | + | chr5_2:76861836-76861855 | Msa0789120:CDS | 40.0% | |
| TTAGACAGATTACACACAGC+GGG | - | chr5_2:76861996-76862015 | None:intergenic | 40.0% | |
| CACCAATTGATAGAGTGAAG+TGG | - | chr5_2:76862184-76862203 | None:intergenic | 40.0% | |
| CGCTTTCATTGATATCCATC+TGG | + | chr5_2:76862464-76862483 | Msa0789120:intron | 40.0% | |
| !! | TCGTGTCGGTTCTGAAATTT+AGG | + | chr5_2:76862527-76862546 | Msa0789120:intron | 40.0% |
| CACACCTATGTCTAGATAAG+TGG | - | chr5_2:76862637-76862656 | None:intergenic | 40.0% | |
| CTTATCTAGACATAGGTGTG+TGG | + | chr5_2:76862637-76862656 | Msa0789120:intron | 40.0% | |
| ATTCTGTTGTGAAGTTGACG+TGG | - | chr5_2:76862727-76862746 | None:intergenic | 40.0% | |
| AATTGCTTAGCTCCAGTTAG+AGG | + | chr5_2:76862744-76862763 | Msa0789120:intron | 40.0% | |
| TTCACAAGTCCAAATGCTCA+AGG | - | chr5_2:76863197-76863216 | None:intergenic | 40.0% | |
| ! | GGAGATTTTGCTCTTGTAGT+TGG | - | chr5_2:76863228-76863247 | None:intergenic | 40.0% |
| TCTCAGAATAACCCCACTAA+AGG | + | chr5_2:76863348-76863367 | Msa0789120:CDS | 40.0% | |
| ACAGGGCTAATTCCTTTAGT+GGG | - | chr5_2:76863363-76863382 | None:intergenic | 40.0% | |
| AACAGGGCTAATTCCTTTAG+TGG | - | chr5_2:76863364-76863383 | None:intergenic | 40.0% | |
| TTGGATGAACTGATCCTTTC+AGG | - | chr5_2:76863432-76863451 | None:intergenic | 40.0% | |
| TTTCTCTTCCCTTGTTGCAA+TGG | - | chr5_2:76863541-76863560 | None:intergenic | 40.0% | |
| GCTTAATGCTATCCTGCTAT+GGG | - | chr5_2:76863717-76863736 | None:intergenic | 40.0% | |
| TGCTTAATGCTATCCTGCTA+TGG | - | chr5_2:76863718-76863737 | None:intergenic | 40.0% | |
| GATAGCATTAAGCAAACAGC+AGG | + | chr5_2:76863724-76863743 | Msa0789120:exon | 40.0% | |
| CAAACAGCAGGAACATAATC+TGG | + | chr5_2:76863736-76863755 | Msa0789120:three_prime_UTR | 40.0% | |
| GACAAAAACCAGCAAGCTTT+GGG | - | chr5_2:76863906-76863925 | None:intergenic | 40.0% | |
| ! | TAAGTGTTGCATACCTCAAC+TGG | - | chr5_2:76863995-76864014 | None:intergenic | 40.0% |
| TTGAGAATGTTTGGCATCAG+CGG | + | chr5_2:76864044-76864063 | Msa0789120:three_prime_UTR | 40.0% | |
| GCATTGCTCTGTTAAACAGT+TGG | + | chr5_2:76864087-76864106 | Msa0789120:three_prime_UTR | 40.0% | |
| TCGATAGAACCAAGTCAGTG+TGG | - | chr5_2:76860312-76860331 | None:intergenic | 45.0% | |
| CAAAGACGGAAAAGGTGAAG+AGG | + | chr5_2:76860503-76860522 | Msa0789120:CDS | 45.0% | |
| TCGAGGATGAGAGTCTAAAG+TGG | - | chr5_2:76860562-76860581 | None:intergenic | 45.0% | |
| TTGACTGCCCTGTTCTTAAC+CGG | - | chr5_2:76860588-76860607 | None:intergenic | 45.0% | |
| ! | GAACCCCTTGATAATCTTCC+AGG | + | chr5_2:76860946-76860965 | Msa0789120:CDS | 45.0% |
| CTTACTTGTGAGTGGAAACC+AGG | + | chr5_2:76861015-76861034 | Msa0789120:intron | 45.0% | |
| ATAAAGAAATCGCCCTGTCC+TGG | - | chr5_2:76861036-76861055 | None:intergenic | 45.0% | |
| AGGGTTCAAAATGAGGCATG+AGG | - | chr5_2:76861195-76861214 | None:intergenic | 45.0% | |
| GGTTTGGCATCTTCTGATGT+AGG | - | chr5_2:76861477-76861496 | None:intergenic | 45.0% | |
| ATGCCAAACCTCGTAGAGTT+GGG | + | chr5_2:76861487-76861506 | Msa0789120:CDS | 45.0% | |
| GTTGGGACAATGCCAACTTA+TGG | + | chr5_2:76861504-76861523 | Msa0789120:CDS | 45.0% | |
| TTCTCCCTTGGATTACCATG+AGG | + | chr5_2:76861589-76861608 | Msa0789120:intron | 45.0% | |
| TCTCCCTTGGATTACCATGA+GGG | + | chr5_2:76861590-76861609 | Msa0789120:intron | 45.0% | |
| GAAACCCTCATGGTAATCCA+AGG | - | chr5_2:76861597-76861616 | None:intergenic | 45.0% | |
| TGAGGAAAGGATTCATGCGA+AGG | + | chr5_2:76861679-76861698 | Msa0789120:CDS | 45.0% | |
| AAGGATTCATGCGAAGGAAG+TGG | + | chr5_2:76861685-76861704 | Msa0789120:CDS | 45.0% | |
| TTCTTCAACTCCACCCTAGA+AGG | - | chr5_2:76861916-76861935 | None:intergenic | 45.0% | |
| !! | TTCTAGGGTGGAGTTGAAGA+AGG | + | chr5_2:76861915-76861934 | Msa0789120:CDS | 45.0% |
| TTGTATGCAATCAGGCAGAC+AGG | - | chr5_2:76861971-76861990 | None:intergenic | 45.0% | |
| ATTGCCCAAGTCAAGCATGT+AGG | - | chr5_2:76862101-76862120 | None:intergenic | 45.0% | |
| TGTGAAGTTGACGTGGCATT+TGG | - | chr5_2:76862720-76862739 | None:intergenic | 45.0% | |
| AGAGCAAAATCTCCCAAGCT+TGG | + | chr5_2:76863234-76863253 | Msa0789120:CDS | 45.0% | |
| CTCTTCTTACGACCAAGCTT+GGG | - | chr5_2:76863249-76863268 | None:intergenic | 45.0% | |
| ACTCTTCTTACGACCAAGCT+TGG | - | chr5_2:76863250-76863269 | None:intergenic | 45.0% | |
| CAGGGCTAATTCCTTTAGTG+GGG | - | chr5_2:76863362-76863381 | None:intergenic | 45.0% | |
| GTGGTTTCTTTGGCTGAACA+GGG | - | chr5_2:76863380-76863399 | None:intergenic | 45.0% | |
| TGTGGTTTCTTTGGCTGAAC+AGG | - | chr5_2:76863381-76863400 | None:intergenic | 45.0% | |
| CATCCAATTCAGCAACTGCA+CGG | + | chr5_2:76863445-76863464 | Msa0789120:CDS | 45.0% | |
| AACTGCACGGACTTCATCTA+AGG | + | chr5_2:76863458-76863477 | Msa0789120:CDS | 45.0% | |
| CACCTTGTCCATTGCAACAA+GGG | + | chr5_2:76863530-76863549 | Msa0789120:CDS | 45.0% | |
| TTCCCTTGTTGCAATGGACA+AGG | - | chr5_2:76863535-76863554 | None:intergenic | 45.0% | |
| TCCACTTGTCTCATCAGACA+AGG | - | chr5_2:76863598-76863617 | None:intergenic | 45.0% | |
| !! | TCTGGCTCTATGTTCTGAGA+TGG | - | chr5_2:76863624-76863643 | None:intergenic | 45.0% |
| TTGGTACAAGAACCCATAGC+AGG | + | chr5_2:76863702-76863721 | Msa0789120:CDS | 45.0% | |
| TGTTTACTCCCAAAGCTTGC+TGG | + | chr5_2:76863895-76863914 | Msa0789120:three_prime_UTR | 45.0% | |
| GGACAAAAACCAGCAAGCTT+TGG | - | chr5_2:76863907-76863926 | None:intergenic | 45.0% | |
| CTGCAAGGAGGAGAATCATA+AGG | - | chr5_2:76863928-76863947 | None:intergenic | 45.0% | |
| ! | TTGTCAGGTTGTTCCAGTTG+AGG | + | chr5_2:76863979-76863998 | Msa0789120:three_prime_UTR | 45.0% |
| CATATCCACATGTTCCACAC+AGG | + | chr5_2:76864246-76864265 | Msa0789120:three_prime_UTR | 45.0% | |
| !! | AAATGTAAAAAAAAAAATAA+AGG | - | chr5_2:76860755-76860774 | None:intergenic | 5.0% |
| !! | TGCAGCGTTGGTGTAAACGA+TGG | + | chr5_2:76860035-76860054 | Msa0789120:exon | 50.0% |
| ! | GAATCCTCTCCACACTGACT+TGG | + | chr5_2:76860300-76860319 | Msa0789120:intron | 50.0% |
| AGAACCAAGTCAGTGTGGAG+AGG | - | chr5_2:76860307-76860326 | None:intergenic | 50.0% | |
| TCGACAGCCGGTTAAGAACA+GGG | + | chr5_2:76860578-76860597 | Msa0789120:CDS | 50.0% | |
| TTGTGAGTGGAAACCAGGAC+AGG | + | chr5_2:76861020-76861039 | Msa0789120:intron | 50.0% | |
| TGTGAGTGGAAACCAGGACA+GGG | + | chr5_2:76861021-76861040 | Msa0789120:intron | 50.0% | |
| GATGCCAAACCTCGTAGAGT+TGG | + | chr5_2:76861486-76861505 | Msa0789120:CDS | 50.0% | |
| TGTCCCAACTCTACGAGGTT+TGG | - | chr5_2:76861493-76861512 | None:intergenic | 50.0% | |
| GCGAGCTGAGAGAAGAAAAG+AGG | + | chr5_2:76861548-76861567 | Msa0789120:CDS | 50.0% | |
| GATTCATGCGAAGGAAGTGG+AGG | + | chr5_2:76861688-76861707 | Msa0789120:CDS | 50.0% | |
| GCCAGGAAGCTGAGATTAAG+AGG | + | chr5_2:76861830-76861849 | Msa0789120:CDS | 50.0% | |
| GCCTCTTAATCTCAGCTTCC+TGG | - | chr5_2:76861834-76861853 | None:intergenic | 50.0% | |
| TCCAATGCCAAGCTTCTACC+AGG | + | chr5_2:76861882-76861901 | Msa0789120:CDS | 50.0% | |
| TCCTGGTAGAAGCTTGGCAT+TGG | - | chr5_2:76861886-76861905 | None:intergenic | 50.0% | |
| AACTCCACCCTAGAAGGAGT+AGG | - | chr5_2:76861910-76861929 | None:intergenic | 50.0% | |
| AGGGTGGAGTTGAAGAAGGT+TGG | + | chr5_2:76861919-76861938 | Msa0789120:intron | 50.0% | |
| ! | AGCGGGCTTTGTATGCAATC+AGG | - | chr5_2:76861979-76861998 | None:intergenic | 50.0% |
| GCATGCACATCTGTGCACTT+GGG | - | chr5_2:76862073-76862092 | None:intergenic | 50.0% | |
| TGCATGCACATCTGTGCACT+TGG | - | chr5_2:76862074-76862093 | None:intergenic | 50.0% | |
| ACGCACCTACATGCTTGACT+TGG | + | chr5_2:76862093-76862112 | Msa0789120:intron | 50.0% | |
| CGCACCTACATGCTTGACTT+GGG | + | chr5_2:76862094-76862113 | Msa0789120:intron | 50.0% | |
| ! | GTGACTTGTACACGTCGTGT+CGG | + | chr5_2:76862513-76862532 | Msa0789120:intron | 50.0% |
| GTTGACGTGGCATTTGGATG+AGG | - | chr5_2:76862714-76862733 | None:intergenic | 50.0% | |
| GGAGGGAGAGATCTTCTTTG+TGG | - | chr5_2:76863399-76863418 | None:intergenic | 50.0% | |
| TTTCAGGAGTCAGTCGAGGA+GGG | - | chr5_2:76863416-76863435 | None:intergenic | 50.0% | |
| ATCCTTTCAGGAGTCAGTCG+AGG | - | chr5_2:76863420-76863439 | None:intergenic | 50.0% | |
| AGTCCGTGCAGTTGCTGAAT+TGG | - | chr5_2:76863451-76863470 | None:intergenic | 50.0% | |
| TGCACGGACTTCATCTAAGG+CGG | + | chr5_2:76863461-76863480 | Msa0789120:CDS | 50.0% | |
| CCTTGTTGCAATGGACAAGG+TGG | - | chr5_2:76863532-76863551 | None:intergenic | 50.0% | |
| CCACCTTGTCCATTGCAACA+AGG | + | chr5_2:76863529-76863548 | Msa0789120:CDS | 50.0% | |
| TGAAGCAGCTGCAGCTATTG+AGG | + | chr5_2:76863563-76863582 | Msa0789120:CDS | 50.0% | |
| GCCTTGTCTGATGAGACAAG+TGG | + | chr5_2:76863594-76863613 | Msa0789120:CDS | 50.0% | |
| GATTGCCTGTGTGGAACATG+TGG | - | chr5_2:76864254-76864273 | None:intergenic | 50.0% | |
| CGGAAAAGGTGAAGAGGCTG+CGG | + | chr5_2:76860509-76860528 | Msa0789120:CDS | 55.0% | |
| AGACTCTCATCCTCGACAGC+CGG | + | chr5_2:76860566-76860585 | Msa0789120:CDS | 55.0% | |
| CTGTTCTTAACCGGCTGTCG+AGG | - | chr5_2:76860579-76860598 | None:intergenic | 55.0% | |
| CTCGACAGCCGGTTAAGAAC+AGG | + | chr5_2:76860577-76860596 | Msa0789120:CDS | 55.0% | |
| CAAGCAGACTCGACTGTCCA+AGG | + | chr5_2:76860611-76860630 | Msa0789120:CDS | 55.0% | |
| GGCATTGTCCCAACTCTACG+AGG | - | chr5_2:76861498-76861517 | None:intergenic | 55.0% | |
| GTAGGCTCCTGGTAGAAGCT+TGG | - | chr5_2:76861892-76861911 | None:intergenic | 55.0% | |
| ACCAGGAGCCTACTCCTTCT+AGG | + | chr5_2:76861899-76861918 | Msa0789120:CDS | 55.0% | |
| CCAGGAGCCTACTCCTTCTA+GGG | + | chr5_2:76861900-76861919 | Msa0789120:CDS | 55.0% | |
| CTTTCAGGAGTCAGTCGAGG+AGG | - | chr5_2:76863417-76863436 | None:intergenic | 55.0% | |
| ! | CTCCTCGACTGACTCCTGAA+AGG | + | chr5_2:76863415-76863434 | Msa0789120:CDS | 55.0% |
| CCCTAGAAGGAGTAGGCTCC+TGG | - | chr5_2:76861903-76861922 | None:intergenic | 60.0% | |
| ! | GGAGCCTACTCCTTCTAGGG+TGG | + | chr5_2:76861903-76861922 | Msa0789120:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 76860015 | 76864298 | 76860015 | ID=Msa0789120;Name=Msa0789120 |
| chr5_2 | mRNA | 76860015 | 76864298 | 76860015 | ID=Msa0789120-mRNA-1;Parent=Msa0789120;Name=Msa0789120-mRNA-1;_AED=0.22;_eAED=0.22;_QI=39|1|1|1|1|1|8|570|463 |
| chr5_2 | exon | 76860015 | 76860293 | 76860015 | ID=Msa0789120-mRNA-1:exon:23360;Parent=Msa0789120-mRNA-1 |
| chr5_2 | exon | 76860381 | 76860632 | 76860381 | ID=Msa0789120-mRNA-1:exon:23361;Parent=Msa0789120-mRNA-1 |
| chr5_2 | exon | 76860783 | 76860823 | 76860783 | ID=Msa0789120-mRNA-1:exon:23362;Parent=Msa0789120-mRNA-1 |
| chr5_2 | exon | 76860915 | 76860986 | 76860915 | ID=Msa0789120-mRNA-1:exon:23363;Parent=Msa0789120-mRNA-1 |
| chr5_2 | exon | 76861473 | 76861569 | 76861473 | ID=Msa0789120-mRNA-1:exon:23364;Parent=Msa0789120-mRNA-1 |
| chr5_2 | exon | 76861665 | 76861736 | 76861665 | ID=Msa0789120-mRNA-1:exon:23365;Parent=Msa0789120-mRNA-1 |
| chr5_2 | exon | 76861826 | 76861936 | 76861826 | ID=Msa0789120-mRNA-1:exon:23366;Parent=Msa0789120-mRNA-1 |
| chr5_2 | exon | 76863222 | 76864298 | 76863222 | ID=Msa0789120-mRNA-1:exon:23367;Parent=Msa0789120-mRNA-1 |
| chr5_2 | five_prime_UTR | 76860015 | 76860053 | 76860015 | ID=Msa0789120-mRNA-1:five_prime_utr;Parent=Msa0789120-mRNA-1 |
| chr5_2 | CDS | 76860054 | 76860293 | 76860054 | ID=Msa0789120-mRNA-1:cds;Parent=Msa0789120-mRNA-1 |
| chr5_2 | CDS | 76860381 | 76860632 | 76860381 | ID=Msa0789120-mRNA-1:cds;Parent=Msa0789120-mRNA-1 |
| chr5_2 | CDS | 76860783 | 76860823 | 76860783 | ID=Msa0789120-mRNA-1:cds;Parent=Msa0789120-mRNA-1 |
| chr5_2 | CDS | 76860915 | 76860986 | 76860915 | ID=Msa0789120-mRNA-1:cds;Parent=Msa0789120-mRNA-1 |
| chr5_2 | CDS | 76861473 | 76861569 | 76861473 | ID=Msa0789120-mRNA-1:cds;Parent=Msa0789120-mRNA-1 |
| chr5_2 | CDS | 76861665 | 76861736 | 76861665 | ID=Msa0789120-mRNA-1:cds;Parent=Msa0789120-mRNA-1 |
| chr5_2 | CDS | 76861826 | 76861936 | 76861826 | ID=Msa0789120-mRNA-1:cds;Parent=Msa0789120-mRNA-1 |
| chr5_2 | CDS | 76863222 | 76863728 | 76863222 | ID=Msa0789120-mRNA-1:cds;Parent=Msa0789120-mRNA-1 |
| chr5_2 | three_prime_UTR | 76863729 | 76864298 | 76863729 | ID=Msa0789120-mRNA-1:three_prime_utr;Parent=Msa0789120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
