AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1377530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1377530 MtrunA17_Chr7g0260961 97.530 1012 18 2 1 1011 1 1006 0.0 2045
Msa1377530 MtrunA17_Chr1g0195401 39.300 486 264 11 542 1008 127 600 1.03e-111 358
Msa1377530 MtrunA17_Chr4g0026531 30.477 817 482 21 242 1010 28 806 8.50e-110 359
Msa1377530 MtrunA17_Chr1g0195411 47.895 190 97 2 786 974 4 192 1.16e-55 191
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1377530 AT2G31320.1 68.209 1016 285 10 1 1011 1 983 0.0 1399
Msa1377530 AT4G02390.3 39.754 488 264 10 542 1010 89 565 3.84e-107 345
Msa1377530 AT4G02390.1 39.754 488 264 10 542 1010 160 636 7.84e-107 347
Msa1377530 AT4G02390.2 39.754 488 264 10 542 1010 158 634 1.19e-106 346
Msa1377530 AT5G22470.1 30.303 825 479 22 234 1010 29 805 1.35e-100 335
Msa1377530 AT3G14890.2 28.782 271 176 8 9 266 49 315 6.64e-12 70.1
Msa1377530 AT3G14890.1 31.658 199 122 6 9 197 49 243 9.29e-11 66.6

Find 274 sgRNAs with CRISPR-Local

Find 596 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATTCATCCACATATTATT+AGG 0.105501 tig0019933:-71760 Msa1377530:CDS
GGGCATGAGGCCATCGAATT+TGG 0.181131 tig0019933:+77143 None:intergenic
CGACTATTCTTTGAGAAAAC+TGG 0.242070 tig0019933:-72456 Msa1377530:CDS
TAGCCAGTTGCTGGGGCTTC+AGG 0.259348 tig0019933:+70025 None:intergenic
CAGTGGTTCAAATCTCAAAA+AGG 0.259566 tig0019933:-74217 Msa1377530:CDS
TGTTCTCTACTTCAGGTTCT+AGG 0.267279 tig0019933:-70096 Msa1377530:intron
ATCTTGATCAATTCTATTAA+TGG 0.278783 tig0019933:+72192 None:intergenic
AAACTAGAGGTGTGCTGTTT+TGG 0.279965 tig0019933:-68695 Msa1377530:three_prime_UTR
GATTTGAGAGTTGCCATCTC+TGG 0.283526 tig0019933:-74091 Msa1377530:CDS
CATTCATCCACATATTATTA+GGG 0.284288 tig0019933:-71759 Msa1377530:CDS
TACTGATTATCTGTTTCCTT+TGG 0.287387 tig0019933:+74317 None:intergenic
TATCTTCTTCAATTATTTGC+AGG 0.292751 tig0019933:+72589 None:intergenic
CAAATAATTGAAGAAGATAA+TGG 0.297851 tig0019933:-72585 Msa1377530:CDS
AATAGTCAGAGAGGACTATT+TGG 0.300812 tig0019933:-73600 Msa1377530:CDS
GGTTGCAATGGTACTCTTGC+AGG 0.310032 tig0019933:+77200 None:intergenic
ACTGATTATCTGTTTCCTTT+GGG 0.313751 tig0019933:+74318 None:intergenic
CAGTTTCCCAAGTGGCATTT+CGG 0.317336 tig0019933:+72044 None:intergenic
GCTTCTGGCCTACAGGATTC+TGG 0.317832 tig0019933:-73461 Msa1377530:CDS
CTGGAAACCCTTGGGAGGCC+TGG 0.325393 tig0019933:-72437 Msa1377530:CDS
ATTTGTCTACTGGTATTAAC+AGG 0.328166 tig0019933:-73385 Msa1377530:intron
ACTTTGCATATTCAGATTCC+AGG 0.332395 tig0019933:+69453 None:intergenic
AGTGCTGTTCATGATGCTTC+TGG 0.337109 tig0019933:-73476 Msa1377530:CDS
TTGCCAACTTTGTCTCTGTA+AGG 0.340991 tig0019933:+71128 None:intergenic
AGCCCCAGCAACTGGCTATA+TGG 0.348497 tig0019933:-70020 Msa1377530:intron
GAGCCCAGAGATCTTTGCTC+TGG 0.349228 tig0019933:+75024 None:intergenic
ACTTTGCCCCTTGACTTTGA+TGG 0.354008 tig0019933:+73496 None:intergenic
CACTTCCCTTCAGCACGCTT+CGG 0.357140 tig0019933:+74347 None:intergenic
TTGGGTGTGTTTGTTAGTGC+AGG 0.358270 tig0019933:-68552 Msa1377530:three_prime_UTR
CCTCCTGAAGCCCCAGCAAC+TGG 0.366832 tig0019933:-70028 Msa1377530:CDS
AGCCTGATGGTCAAGGTGCC+AGG 0.368170 tig0019933:-75482 Msa1377530:CDS
GGACTATTTGGTTGACTGTA+TGG 0.370013 tig0019933:-73588 Msa1377530:CDS
TGGTCAAGGTGCCAGGGGTT+TGG 0.371181 tig0019933:-75475 Msa1377530:CDS
CTTCCAAAGGTGGCACTAAA+CGG 0.382184 tig0019933:-75181 Msa1377530:CDS
TTCCAAAGGTGGCACTAAAC+GGG 0.385197 tig0019933:-75180 Msa1377530:CDS
AAGTTTCACTGTTTGATGTT+TGG 0.385231 tig0019933:+74119 None:intergenic
TGTCGAAATCTGATGCAATC+AGG 0.391979 tig0019933:-72488 Msa1377530:CDS
AAGGTGCCAGGGGTTTGGCT+TGG 0.393692 tig0019933:-75470 Msa1377530:CDS
GGTGGTCAGTGGAGCGCTTA+AGG 0.394139 tig0019933:-73752 Msa1377530:CDS
ATCAATGGAGTCGTCGTTGT+TGG 0.395881 tig0019933:+71437 None:intergenic
ATTTATACAACGGAATCTTC+AGG 0.397858 tig0019933:+74064 None:intergenic
AATATGTCTGATTTGTCTAC+TGG 0.398742 tig0019933:-73395 Msa1377530:CDS
ATTGCTACGTGTTTCGCAAA+TGG 0.400336 tig0019933:-72557 Msa1377530:CDS
TTTAAAATGAGTATGTTGTT+GGG 0.404812 tig0019933:+68354 None:intergenic
ATTGTGTTAACATACCCTTT+TGG 0.408371 tig0019933:+72007 None:intergenic
AGGCCCAGAGCAAAGATCTC+TGG 0.408797 tig0019933:-75028 Msa1377530:CDS
AGTGCTGATGGAATGATGTT+TGG 0.410252 tig0019933:-74482 Msa1377530:CDS
TTGCTACGTGTTTCGCAAAT+GGG 0.412307 tig0019933:-72556 Msa1377530:CDS
AGATAATCAGTACCTTAAAA+AGG 0.412335 tig0019933:-74306 Msa1377530:intron
CCTAATAATATGTGGATGAA+TGG 0.413880 tig0019933:+71760 None:intergenic
TCATGATGCTTCTGGCCTAC+AGG 0.417766 tig0019933:-73468 Msa1377530:CDS
CTTAAAAGCATTAGACCAAC+AGG 0.419926 tig0019933:+69760 None:intergenic
TAAACTGCAATTCTTGTTGA+AGG 0.420099 tig0019933:-68747 Msa1377530:CDS
TGAAATAGCCTCAAGATTAG+TGG 0.423165 tig0019933:-71469 Msa1377530:CDS
CTTCTTATAATTATCATCAA+TGG 0.427067 tig0019933:+71422 None:intergenic
TCCATCCTCATTTCTTGTGA+TGG 0.429629 tig0019933:+68717 None:intergenic
AAATAGTCCTCTCTGACTAT+TGG 0.430169 tig0019933:+73602 None:intergenic
AAATTATCCACTTCAATTGA+TGG 0.434056 tig0019933:+75417 None:intergenic
ATTTGAGAGTTGCCATCTCT+GGG 0.434588 tig0019933:-74090 Msa1377530:CDS
CCCCTGGCACCTTGACCATC+AGG 0.441143 tig0019933:+75480 None:intergenic
ATTTAAAATGAGTATGTTGT+TGG 0.442452 tig0019933:+68353 None:intergenic
CGTTGTTCCCTGTGGGAAAC+CGG 0.449287 tig0019933:-69417 Msa1377530:CDS
TATAATATAAGAAGCTTCAT+TGG 0.450993 tig0019933:+68378 None:intergenic
GAGCAAAAGTAATATCCAAA+AGG 0.451321 tig0019933:-72022 Msa1377530:CDS
ACCTGGGAGATTCTTCCCCT+TGG 0.453013 tig0019933:-72391 Msa1377530:CDS
AACATCAAACAGTGAAACTT+TGG 0.454487 tig0019933:-74116 Msa1377530:CDS
TCAACTTTGTACATATCAAA+TGG 0.457516 tig0019933:+73548 None:intergenic
TCTCGTAACTTCTCGTGATA+AGG 0.457713 tig0019933:-68614 Msa1377530:three_prime_UTR
AGCAGAGATGCGTGAAATGC+TGG 0.457723 tig0019933:-74970 Msa1377530:CDS
TGCTCATTGATGCTAGCAAT+AGG 0.458324 tig0019933:-71802 Msa1377530:CDS
TATTGTCATTTCAGTGCTGA+TGG 0.458515 tig0019933:-74494 Msa1377530:intron
CAGAAATCTCATGCATGATC+TGG 0.458801 tig0019933:-68502 Msa1377530:three_prime_UTR
CAAGATTGGAGGGAACAAAC+TGG 0.458917 tig0019933:-72517 Msa1377530:CDS
GAGAGGGTGAGGAGAGAGAG+TGG 0.459076 tig0019933:-77338 Msa1377530:five_prime_UTR
CACATCTCCCTTGACTTTAG+CGG 0.462505 tig0019933:+75124 None:intergenic
TTGAGAAAACTGGAAACCCT+TGG 0.466084 tig0019933:-72446 Msa1377530:CDS
TTCTAGGTTGACGAACTTTG+TGG 0.466090 tig0019933:-70080 Msa1377530:CDS
TGGAAACCCTTGGGAGGCCT+GGG 0.466277 tig0019933:-72436 Msa1377530:CDS
TCTCTCATCTTCTGATCAAT+CGG 0.467085 tig0019933:-75379 Msa1377530:CDS
AAATAATTGAAGAAGATAAT+GGG 0.467660 tig0019933:-72584 Msa1377530:CDS
TTCAGCACGCTTCGGTTCGC+AGG 0.467797 tig0019933:+74355 None:intergenic
TTTGCGTACTCTGCTTTCCA+TGG 0.468447 tig0019933:+77246 None:intergenic
ATTGAAGTGGATAATTTGCC+TGG 0.469195 tig0019933:-75411 Msa1377530:CDS
AGTCCTTGCTCTCTATGTGA+TGG 0.470443 tig0019933:-74452 Msa1377530:CDS
AAAGCAGAGTACGCAAAATC+AGG 0.472100 tig0019933:-77240 Msa1377530:CDS
AGGCTATTTCAATATCTTGA+AGG 0.475473 tig0019933:+71481 None:intergenic
GCACCATGCTAAGTGTCTCT+TGG 0.477110 tig0019933:-75448 Msa1377530:CDS
GAACTTAGAGTCGCTTCGTT+GGG 0.480032 tig0019933:-76722 Msa1377530:CDS
AGGGAGATGTGTCTGCGAGC+AGG 0.481221 tig0019933:-75112 Msa1377530:CDS
CTCAAGATCACGTGCCGCCC+CGG 0.481538 tig0019933:+75061 None:intergenic
GGAGGAATGTACCGGTGCAC+TGG 0.484725 tig0019933:-74413 Msa1377530:CDS
TTTGCCTGCAGTTTGGCAAA+GGG 0.487008 tig0019933:-69843 Msa1377530:intron
GCCGCCTCTAAGTCGAGTGC+TGG 0.487078 tig0019933:-76613 Msa1377530:CDS
TGCCAACTTTGTCTCTGTAA+GGG 0.487650 tig0019933:+71129 None:intergenic
GCCAATGGTCAAGATTCAAC+AGG 0.488288 tig0019933:-74945 Msa1377530:CDS
AGAACCATATAGCCAGTTGC+TGG 0.488876 tig0019933:+70016 None:intergenic
TCTTTAATGTGGAAACATAC+AGG 0.491969 tig0019933:-72167 Msa1377530:intron
TGAGAAAACTGGAAACCCTT+GGG 0.492370 tig0019933:-72445 Msa1377530:CDS
AGCCCAGAGATCTTTGCTCT+GGG 0.492857 tig0019933:+75025 None:intergenic
GCAATGCTGATCCATCAGTC+AGG 0.495787 tig0019933:-71832 Msa1377530:CDS
TGTTTAGTAGTATATACTAT+TGG 0.497901 tig0019933:-77389 Msa1377530:five_prime_UTR
TTTAGTGCCACCTTTGGAAG+AGG 0.498151 tig0019933:+75184 None:intergenic
TCCTGTTGAATCTTGACCAT+TGG 0.499269 tig0019933:+74944 None:intergenic
TGTGTCTGCGAGCAGGGTAG+CGG 0.500249 tig0019933:-75105 Msa1377530:CDS
AAAGCATTCTACTAAAGGAC+TGG 0.500575 tig0019933:-69489 Msa1377530:CDS
GGCCCAGAGCAAAGATCTCT+GGG 0.501573 tig0019933:-75027 Msa1377530:CDS
TCCACATATTATTAGGGATG+AGG 0.505116 tig0019933:-71753 Msa1377530:CDS
AGCAAAAGTAATATCCAAAA+GGG 0.506378 tig0019933:-72021 Msa1377530:intron
CAAGGAAAGCATTCTACTAA+AGG 0.506710 tig0019933:-69494 Msa1377530:CDS
GTTTCGCAAACTTCACGTGC+TGG 0.507650 tig0019933:-76565 Msa1377530:CDS
TCTTCACTGTCATGAGGAAG+TGG 0.510609 tig0019933:+71381 None:intergenic
ACCCTCAAAACGCGAAGCCA+TGG 0.510955 tig0019933:-77263 Msa1377530:CDS
CTATATAATAAGAGAGGGTG+AGG 0.512951 tig0019933:-77349 Msa1377530:five_prime_UTR
AAGAAATAGTACAATTTCCA+AGG 0.514163 tig0019933:+72374 None:intergenic
TCAGCAGGAGTCCTTGATGA+TGG 0.514978 tig0019933:+74166 None:intergenic
CTTAATGTGAACACATTCAA+AGG 0.517305 tig0019933:+68423 None:intergenic
CGAAGCGTGCTGAAGGGAAG+TGG 0.517630 tig0019933:-74346 Msa1377530:CDS
AAGACTATTCAGAAGCAACC+TGG 0.518065 tig0019933:-72408 Msa1377530:CDS
ATCAATTCTATTAATGGAGG+GGG 0.518129 tig0019933:+72198 None:intergenic
GCCTGATGGTCAAGGTGCCA+GGG 0.518214 tig0019933:-75481 Msa1377530:CDS
GAAATAGCCTCAAGATTAGT+GGG 0.518552 tig0019933:-71468 Msa1377530:CDS
CGCAAAATTGATGCAGTAGG+TGG 0.519400 tig0019933:-73909 Msa1377530:CDS
GCCAACTTTGTCTCTGTAAG+GGG 0.519558 tig0019933:+71130 None:intergenic
TCTAGGTTGACGAACTTTGT+GGG 0.519658 tig0019933:-70079 Msa1377530:CDS
GAGGTGCAATTCTCAGTCCT+TGG 0.520896 tig0019933:+70047 None:intergenic
CATGAGGCCATCGAATTTGG+AGG 0.521208 tig0019933:+77146 None:intergenic
GGGAGATGTGTCTGCGAGCA+GGG 0.522810 tig0019933:-75111 Msa1377530:CDS
TTGGCAACAGAATGCTCCTA+TGG 0.523040 tig0019933:-71112 Msa1377530:CDS
TGCAATTCTTGTTGAAGGTG+AGG 0.523731 tig0019933:-68742 Msa1377530:CDS
ACAGAAGTTTGACTTTCAGC+AGG 0.526769 tig0019933:+74151 None:intergenic
GTCGAAATCTGATGCAATCA+GGG 0.527691 tig0019933:-72487 Msa1377530:CDS
GGCTATTTCAATATCTTGAA+GGG 0.528095 tig0019933:+71482 None:intergenic
TTAAAATGAGTATGTTGTTG+GGG 0.528688 tig0019933:+68355 None:intergenic
AAGTACATTGAGAGCGGTGG+TGG 0.529024 tig0019933:-76679 Msa1377530:CDS
GTCAAAGGCCGCTAAAGTCA+AGG 0.529642 tig0019933:-75132 Msa1377530:CDS
CGCATATCTACTAAGCCTGA+TGG 0.530256 tig0019933:-75495 Msa1377530:CDS
TGATGACACCGGTTTCCCAC+AGG 0.530388 tig0019933:+69409 None:intergenic
ACTGGGCAAGAAAATGCCCC+TGG 0.531158 tig0019933:-69471 Msa1377530:CDS
ATAATATGTGGATGAATGGA+AGG 0.532035 tig0019933:+71764 None:intergenic
AAGTGGATAATTTGCCTGGA+TGG 0.532909 tig0019933:-75407 Msa1377530:CDS
TCCTCATCCCTAATAATATG+TGG 0.533242 tig0019933:+71752 None:intergenic
TTTGAACCAGCATTCGACTT+CGG 0.536967 tig0019933:+76643 None:intergenic
AGCTTGATTTGCGTGACCGT+TGG 0.538235 tig0019933:-74917 Msa1377530:intron
TGCGAACCGAAGCGTGCTGA+AGG 0.538550 tig0019933:-74353 Msa1377530:CDS
GAACCATATAGCCAGTTGCT+GGG 0.542371 tig0019933:+70017 None:intergenic
CTTCGGTTCGCAGGTAGAGT+AGG 0.542539 tig0019933:+74364 None:intergenic
GATCAAGATGCTCTTTAATG+TGG 0.543678 tig0019933:-72178 Msa1377530:CDS
ATGTACAAAGTTGAAATGAT+TGG 0.544000 tig0019933:-73539 Msa1377530:CDS
AGAACTTAGAGTCGCTTCGT+TGG 0.544067 tig0019933:-76723 Msa1377530:CDS
CTTCATGCAAAAGTGAAGAA+AGG 0.545004 tig0019933:-73882 Msa1377530:intron
GCAACCGAGAAGCTCCGTCT+TGG 0.548248 tig0019933:-77183 Msa1377530:CDS
CGAGTGGGAAATGACAAGAT+TGG 0.548954 tig0019933:-72531 Msa1377530:CDS
TCCAAAGGTGGCACTAAACG+GGG 0.550317 tig0019933:-75179 Msa1377530:CDS
GGCACACCGAAGTCGAATGC+TGG 0.551393 tig0019933:-76649 Msa1377530:CDS
TGATCAATTCTATTAATGGA+GGG 0.554166 tig0019933:+72196 None:intergenic
TTGATCAATTCTATTAATGG+AGG 0.555295 tig0019933:+72195 None:intergenic
TGAGCTCATACACATTTCCA+AGG 0.555953 tig0019933:+69728 None:intergenic
CCAGTTGCTGGGGCTTCAGG+AGG 0.557381 tig0019933:+70028 None:intergenic
TGGGTGTGTTTGTTAGTGCA+GGG 0.558497 tig0019933:-68551 Msa1377530:three_prime_UTR
ACTGAGCACTCTTGCTGACA+AGG 0.558738 tig0019933:+69806 None:intergenic
GATCAATTCTATTAATGGAG+GGG 0.558979 tig0019933:+72197 None:intergenic
GCTGAAAGTCAAACTTCTGT+AGG 0.559238 tig0019933:-74148 Msa1377530:CDS
ATCTTCAGGCAACCCAGAGA+TGG 0.559690 tig0019933:+74078 None:intergenic
ATTGATCTCAAATTCCATCA+TGG 0.560644 tig0019933:+72071 None:intergenic
TTAATGTGAACACATTCAAA+GGG 0.560843 tig0019933:+68424 None:intergenic
AGCAAGCTATCCCTGACTGA+TGG 0.560975 tig0019933:+71821 None:intergenic
TACAGATACTAACTGCTTGG+TGG 0.561481 tig0019933:-73770 Msa1377530:intron
AATATGTCCGAAATGCCACT+TGG 0.562170 tig0019933:-72051 Msa1377530:CDS
CAAAGATCTCTGGGCTCTGA+AGG 0.563703 tig0019933:-75018 Msa1377530:CDS
TGCTACGTGTTTCGCAAATG+GGG 0.565409 tig0019933:-72555 Msa1377530:CDS
TTTGTTCCCAGGCCTCCCAA+GGG 0.569125 tig0019933:+72430 None:intergenic
AAAATACTATATAATAAGAG+AGG 0.570059 tig0019933:-77355 Msa1377530:five_prime_UTR
CTTTGCATATTCAGATTCCA+GGG 0.571220 tig0019933:+69454 None:intergenic
GTTTCGCAAATGGGGTCGAG+TGG 0.571251 tig0019933:-72547 Msa1377530:CDS
ACGGAGCTTCTCGGTTGCAA+TGG 0.571948 tig0019933:+77188 None:intergenic
GTGGGAAATGACAAGATTGG+AGG 0.572154 tig0019933:-72528 Msa1377530:CDS
ACTTACAGATACTAACTGCT+TGG 0.575225 tig0019933:-73773 Msa1377530:intron
ACTATCTCCATCAATTGAAG+TGG 0.576095 tig0019933:-75424 Msa1377530:CDS
GAGAGCGGTGGTGGTAGTAG+TGG 0.577586 tig0019933:-76670 Msa1377530:CDS
ATGGTCACCATCAAAGTCAA+GGG 0.578992 tig0019933:-73503 Msa1377530:CDS
TATTGCCTCCGCCATCATCA+AGG 0.581370 tig0019933:-74177 Msa1377530:CDS
ACTAACTGCTTGGTGGTCAG+TGG 0.581725 tig0019933:-73763 Msa1377530:CDS
CATGGTCACCATCAAAGTCA+AGG 0.582667 tig0019933:-73504 Msa1377530:CDS
ACCGGTGTCATCAAATGTCA+AGG 0.583088 tig0019933:-69399 Msa1377530:CDS
TATAGACATACCGTATGTGT+GGG 0.584053 tig0019933:+71318 None:intergenic
TCCAAGGGGAAGAATCTCCC+AGG 0.585297 tig0019933:+72390 None:intergenic
TCCATCACAAGAAATGAGGA+TGG 0.585328 tig0019933:-68718 Msa1377530:exon
GATGAGAGACTACTCCATCC+AGG 0.585331 tig0019933:+75393 None:intergenic
AGAAATAGTACAATTTCCAA+GGG 0.587610 tig0019933:+72375 None:intergenic
ATGGTGCCAAGCCAAACCCC+TGG 0.590698 tig0019933:+75464 None:intergenic
AGACTATTCAGAAGCAACCT+GGG 0.591957 tig0019933:-72407 Msa1377530:CDS
TCTGGCCACATACTAGAGGA+AGG 0.592429 tig0019933:-73443 Msa1377530:CDS
GCTGATGGAATGATGTTTGG+AGG 0.592452 tig0019933:-74479 Msa1377530:CDS
GTTATTCTGGAGGAATGTAC+CGG 0.592767 tig0019933:-74421 Msa1377530:CDS
TCTACTAAGCCTGATGGTCA+AGG 0.596570 tig0019933:-75489 Msa1377530:CDS
GTAGAATGCTTTCCTTGCGG+AGG 0.597209 tig0019933:+69500 None:intergenic
GGAGTCCTTGATGATGGCGG+AGG 0.598242 tig0019933:+74172 None:intergenic
TCAAAGGCCGCTAAAGTCAA+GGG 0.599366 tig0019933:-75131 Msa1377530:CDS
GCCCCTTACAGAGACAAAGT+TGG 0.599749 tig0019933:-71131 Msa1377530:CDS
AAACCATCACATAGAGAGCA+AGG 0.601001 tig0019933:+74449 None:intergenic
AAGTTGAGATGCGGAAGGCA+AGG 0.601482 tig0019933:-73726 Msa1377530:intron
TGGGAAATGACAAGATTGGA+GGG 0.601675 tig0019933:-72527 Msa1377530:CDS
AACAGAATGCTCCTATGGCA+TGG 0.602372 tig0019933:-71107 Msa1377530:intron
AGGTTCCATCACAAGAAATG+AGG 0.602431 tig0019933:-68722 Msa1377530:exon
AAGCATTCTACTAAAGGACT+GGG 0.602949 tig0019933:-69488 Msa1377530:CDS
GATTGGTGAGGCTTCTAGCA+TGG 0.603400 tig0019933:-73522 Msa1377530:CDS
TCTTCAATATGCACTCAGCA+TGG 0.604013 tig0019933:+76871 None:intergenic
TTTCGCAAATGGGGTCGAGT+GGG 0.606651 tig0019933:-72546 Msa1377530:CDS
ATATAGACATACCGTATGTG+TGG 0.608110 tig0019933:+71317 None:intergenic
ACGTGATCTTGAGAATAGAC+TGG 0.608484 tig0019933:-75051 Msa1377530:CDS
TCAATCGGCGGTCAGTGAGT+TGG 0.609881 tig0019933:-75364 Msa1377530:CDS
CGGAAATGTATCCAGTGCAC+CGG 0.610371 tig0019933:+74402 None:intergenic
GCCTTGACATTTGATGACAC+CGG 0.612387 tig0019933:+69398 None:intergenic
CTCATCTTCTGATCAATCGG+CGG 0.612790 tig0019933:-75376 Msa1377530:CDS
GTCAAATCCCACTAATCTTG+AGG 0.614798 tig0019933:+71461 None:intergenic
AAGCTTAAAACTTACTTGAG+CGG 0.615129 tig0019933:+69337 None:intergenic
AAACGCAAAATTGATGCAGT+AGG 0.615874 tig0019933:-73912 Msa1377530:CDS
CTAAAATCTTCACTGTCATG+AGG 0.616080 tig0019933:+71375 None:intergenic
GTTCAATCCTCCAAATTCGA+TGG 0.617034 tig0019933:-77153 Msa1377530:CDS
TAATATGTGGATGAATGGAA+GGG 0.619233 tig0019933:+71765 None:intergenic
CCTGATGGTCAAGGTGCCAG+GGG 0.620093 tig0019933:-75480 Msa1377530:CDS
AAGTTATGATTACGGGCATG+AGG 0.620971 tig0019933:+77130 None:intergenic
GTAGGAACATTTACTCCACT+CGG 0.621416 tig0019933:+74382 None:intergenic
GAGCTCATACACATTTCCAA+GGG 0.623853 tig0019933:+69729 None:intergenic
CGTGCTGGTTGCAAGCATTG+CGG 0.624498 tig0019933:-76550 Msa1377530:CDS
GATGACACCGGTTTCCCACA+GGG 0.624877 tig0019933:+69410 None:intergenic
AACCATATAGCCAGTTGCTG+GGG 0.625838 tig0019933:+70018 None:intergenic
CAACAATCCTCTTCCAAAGG+TGG 0.628043 tig0019933:-75191 Msa1377530:CDS
ATATGTCCGAAATGCCACTT+GGG 0.628831 tig0019933:-72050 Msa1377530:CDS
AAATACTATATAATAAGAGA+GGG 0.629527 tig0019933:-77354 Msa1377530:five_prime_UTR
CGTGAAATGCTGGATGCCAA+TGG 0.629579 tig0019933:-74960 Msa1377530:CDS
GCGAACCGAAGCGTGCTGAA+GGG 0.632007 tig0019933:-74352 Msa1377530:CDS
GTATGTGGCCAGAATCCTGT+AGG 0.633585 tig0019933:+73453 None:intergenic
GGACTTGTACATAGTCCATG+TGG 0.634227 tig0019933:-68640 Msa1377530:three_prime_UTR
GATGATGTCGTTGTTCCCTG+TGG 0.635856 tig0019933:-69425 Msa1377530:CDS
TCCAGCACTCGACTTAGAGG+CGG 0.639433 tig0019933:+76612 None:intergenic
GAACAGAACACACTTCAACT+CGG 0.639685 tig0019933:+77310 None:intergenic
AGAGGGTGAGCAAAAGTCAA+AGG 0.641322 tig0019933:-75147 Msa1377530:CDS
ACACAACAATCCTCTTCCAA+AGG 0.641848 tig0019933:-75194 Msa1377530:CDS
CAATGCTGATCCATCAGTCA+GGG 0.642435 tig0019933:-71831 Msa1377530:CDS
ACCAAAACTTACCATGCCAT+AGG 0.643460 tig0019933:+71096 None:intergenic
TTTGGAAGAGGATTGTTGTG+TGG 0.645988 tig0019933:+75196 None:intergenic
GACTTGTACATAGTCCATGT+GGG 0.646292 tig0019933:-68639 Msa1377530:three_prime_UTR
CTGGCCACATACTAGAGGAA+GGG 0.647983 tig0019933:-73442 Msa1377530:CDS
AGAAAGTACATTGAGAGCGG+TGG 0.649025 tig0019933:-76682 Msa1377530:CDS
GGATTCTGGCCACATACTAG+AGG 0.653815 tig0019933:-73447 Msa1377530:CDS
TTTGTGGGCATTCTTAACCA+AGG 0.654222 tig0019933:-70064 Msa1377530:CDS
TGGTAGTGGTACAAATGTCG+AGG 0.657202 tig0019933:-75237 Msa1377530:CDS
GAAAATACCAATAGTCAGAG+AGG 0.660210 tig0019933:-73609 Msa1377530:CDS
TATATGGATAAACCTCCGCA+AGG 0.661215 tig0019933:-69512 Msa1377530:CDS
CAAAGTTGAAATGATTGGTG+AGG 0.661472 tig0019933:-73534 Msa1377530:CDS
TTAGTAGAATGCTTTCCTTG+CGG 0.662055 tig0019933:+69497 None:intergenic
TTTGCATATTCAGATTCCAG+GGG 0.662095 tig0019933:+69455 None:intergenic
TGGAATCTGAATATGCAAAG+TGG 0.664227 tig0019933:-69451 Msa1377530:CDS
TGGTCACCATCAAAGTCAAG+GGG 0.670459 tig0019933:-73502 Msa1377530:CDS
GAAAACTGGAAACCCTTGGG+AGG 0.670628 tig0019933:-72442 Msa1377530:CDS
GCAGGAGTCCTTGATGATGG+CGG 0.670824 tig0019933:+74169 None:intergenic
TAGACATACCGTATGTGTGG+GGG 0.672350 tig0019933:+71320 None:intergenic
ATGATGTCGTTGTTCCCTGT+GGG 0.672597 tig0019933:-69424 Msa1377530:CDS
GGATGAAGTTGAGATGCGGA+AGG 0.673329 tig0019933:-73731 Msa1377530:CDS
ATAGACATACCGTATGTGTG+GGG 0.680316 tig0019933:+71319 None:intergenic
GTTCCAAGAGACACTTAGCA+TGG 0.680316 tig0019933:+75445 None:intergenic
CCAAAGGTGGCACTAAACGG+GGG 0.682751 tig0019933:-75178 Msa1377530:CDS
ATTAGAAAGTACATTGAGAG+CGG 0.683297 tig0019933:-76685 Msa1377530:CDS
TTAAGGATGAAGTTGAGATG+CGG 0.698261 tig0019933:-73735 Msa1377530:CDS
TGATCTTGAGAATAGACTGG+AGG 0.707817 tig0019933:-75048 Msa1377530:CDS
AGGGAAGTGGAAAATCCCAA+AGG 0.709398 tig0019933:-74333 Msa1377530:CDS
GAAATAGTACAATTTCCAAG+GGG 0.718834 tig0019933:+72376 None:intergenic
GATCTCAAATTCCATCATGG+CGG 0.725809 tig0019933:+72074 None:intergenic
GATTGGAGGGAACAAACTGG+AGG 0.726096 tig0019933:-72514 Msa1377530:CDS
AAATGCTGATGACTCCGGGG+CGG 0.729846 tig0019933:-75075 Msa1377530:CDS
GAAATGAGGATGGAAACTAG+AGG 0.742902 tig0019933:-68708 Msa1377530:exon
GCACTGGATACATTTCCGAG+TGG 0.746551 tig0019933:-74397 Msa1377530:CDS
GAAGTTACGAGAATCCCACA+TGG 0.753311 tig0019933:+68625 None:intergenic
GAAGTGGAGATATATCACAG+TGG 0.820451 tig0019933:+71397 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATAGTATTTTGATTTT+AGG + tig0019933:68312-68331 None:intergenic 10.0%
!! AAGTACTAAAAAAAATATAA+TGG + tig0019933:68728-68747 None:intergenic 10.0%
!!! AATTTTAAATATTTTGATCA+TGG - tig0019933:72850-72869 Msa1377530:intron 10.0%
!!! TTTTTAAATTATTTGTTTGA+CGG - tig0019933:73328-73347 Msa1377530:intron 10.0%
!! TATTATTTAAACAATCTAAT+GGG + tig0019933:76632-76651 None:intergenic 10.0%
!! TTATTATTTAAACAATCTAA+TGG + tig0019933:76633-76652 None:intergenic 10.0%
!!! TTATATACAATTTTTCTTAT+TGG - tig0019933:76787-76806 Msa1377530:intron 10.0%
!! AAAATACTATATAATAAGAG+AGG - tig0019933:68318-68337 Msa1377530:three_prime_UTR 15.0%
!! AAATACTATATAATAAGAGA+GGG - tig0019933:68319-68338 Msa1377530:three_prime_UTR 15.0%
!!! AATTTTCATACAATTTTATC+TGG + tig0019933:68835-68854 None:intergenic 15.0%
!! AAATTATATCATAGTTAAGA+GGG + tig0019933:69838-69857 None:intergenic 15.0%
!! AAATAAACATATTCTATTGT+TGG + tig0019933:70971-70990 None:intergenic 15.0%
!! ACAATAATAACTATCAAAAT+TGG + tig0019933:71165-71184 None:intergenic 15.0%
!! AAAAAACAGAATTTATACAA+CGG + tig0019933:71622-71641 None:intergenic 15.0%
!!! AATGAAGCATTAATTATTAA+AGG + tig0019933:71651-71670 None:intergenic 15.0%
!!! AAAATAACATTTTCCTAAAT+TGG + tig0019933:71832-71851 None:intergenic 15.0%
!! AAATAATTGAAGAAGATAAT+GGG - tig0019933:73089-73108 Msa1377530:intron 15.0%
!! AAAATTGATCAAATTAACAA+TGG - tig0019933:74890-74909 Msa1377530:intron 15.0%
!! AATTAACAAATTTCTTTGTT+TGG - tig0019933:75135-75154 Msa1377530:CDS 15.0%
!!! TTATGCTTATTAGTTTATAA+GGG - tig0019933:76000-76019 Msa1377530:intron 15.0%
!!! TGTATTTTTGTTTTATCATT+AGG - tig0019933:76365-76384 Msa1377530:intron 15.0%
!! AAACTTTAATAAAATGAAAG+TGG - tig0019933:76400-76419 Msa1377530:intron 15.0%
!! AACTTTAATAAAATGAAAGT+GGG - tig0019933:76401-76420 Msa1377530:intron 15.0%
!! AAAAAAAAAATACATATAGC+AGG + tig0019933:76855-76874 None:intergenic 15.0%
!! TGTTTAGTAGTATATACTAT+TGG - tig0019933:68284-68303 Msa1377530:three_prime_UTR 20.0%
!! AGAAATGAAATAGAGAAAAA+GGG + tig0019933:68570-68589 None:intergenic 20.0%
!! AAGAAATGAAATAGAGAAAA+AGG + tig0019933:68571-68590 None:intergenic 20.0%
!! AAACGTACATTGATAAAAAT+GGG + tig0019933:68628-68647 None:intergenic 20.0%
!! TAAACGTACATTGATAAAAA+TGG + tig0019933:68629-68648 None:intergenic 20.0%
!!! TTGATTTTTAGACCTATTTT+AGG - tig0019933:68675-68694 Msa1377530:three_prime_UTR 20.0%
!!! TGATTTTTAGACCTATTTTA+GGG - tig0019933:68676-68695 Msa1377530:three_prime_UTR 20.0%
!!! TTTGTTTAATGTTTTCACAA+TGG - tig0019933:68875-68894 Msa1377530:intron 20.0%
!!! AAATGGAAATTTTGATTATC+AGG - tig0019933:69308-69327 Msa1377530:intron 20.0%
!! ATACAAAATGAATATTAGCA+TGG + tig0019933:69603-69622 None:intergenic 20.0%
!! ATTCATAAAACATATCTTTG+AGG + tig0019933:69750-69769 None:intergenic 20.0%
!! GAAATTATATCATAGTTAAG+AGG + tig0019933:69839-69858 None:intergenic 20.0%
!!! TTGAACTAAATGACATTTTA+AGG + tig0019933:69861-69880 None:intergenic 20.0%
!! CAATATGATCATGAAAAATT+AGG + tig0019933:70088-70107 None:intergenic 20.0%
!! CTTTAATCTTTATAAGATGT+TGG + tig0019933:70896-70915 None:intergenic 20.0%
!! AAAAATAAGTCACAATACAT+TGG + tig0019933:71424-71443 None:intergenic 20.0%
!! GCATTAATTATTAAAGGTAA+AGG + tig0019933:71645-71664 None:intergenic 20.0%
!! ACAGAAATAATCAAAGAAAA+AGG + tig0019933:72007-72026 None:intergenic 20.0%
!! ACTAAAAATATTAAGCTGAA+TGG + tig0019933:72341-72360 None:intergenic 20.0%
!!! AATATTTTTAGTTGTTAACC+AGG - tig0019933:72349-72368 Msa1377530:intron 20.0%
!!! ATATTTTTAGTTGTTAACCA+GGG - tig0019933:72350-72369 Msa1377530:intron 20.0%
!!! ATAAAAAGTAGCATACTTTT+AGG + tig0019933:72409-72428 None:intergenic 20.0%
!! CAAATAATTGAAGAAGATAA+TGG - tig0019933:73088-73107 Msa1377530:intron 20.0%
!! ATCTTGATCAATTCTATTAA+TGG + tig0019933:73484-73503 None:intergenic 20.0%
!!! TTAAAACTTTTTACAAGCTA+CGG - tig0019933:73696-73715 Msa1377530:intron 20.0%
!! ATCACATTAATACATGATAT+GGG + tig0019933:73760-73779 None:intergenic 20.0%
!! CTTCTTATAATTATCATCAA+TGG + tig0019933:74254-74273 None:intergenic 20.0%
!!! TTATTTTATTACATCATACG+AGG + tig0019933:74645-74664 None:intergenic 20.0%
!! TTGTATACAATCTTTATCAA+AGG + tig0019933:74809-74828 None:intergenic 20.0%
!! TTGATAAAGATTGTATACAA+AGG - tig0019933:74809-74828 Msa1377530:intron 20.0%
!!! CAAATAACATATAAGTATTG+AGG + tig0019933:75189-75208 None:intergenic 20.0%
!! TGAAAACATCAACATAAAAA+GGG + tig0019933:75693-75712 None:intergenic 20.0%
!! ATGAAAACATCAACATAAAA+AGG + tig0019933:75694-75713 None:intergenic 20.0%
!! TTTAGATTATAGTATTGCTA+CGG + tig0019933:75733-75752 None:intergenic 20.0%
!! TGAAAACATCAACATAAAAA+GGG + tig0019933:75693-75712 None:intergenic 20.0%
!! ATGAAAACATCAACATAAAA+AGG + tig0019933:75694-75713 None:intergenic 20.0%
!! TTTAGATTATAGTATTGCTA+CGG + tig0019933:75733-75752 None:intergenic 20.0%
!!! GTTATGCTTATTAGTTTATA+AGG - tig0019933:75999-76018 Msa1377530:intron 20.0%
!! TTCCTTTGTAAAATAGTATA+TGG - tig0019933:76145-76164 Msa1377530:intron 20.0%
!!! ATCCATATACTATTTTACAA+AGG + tig0019933:76150-76169 None:intergenic 20.0%
!! AGATATAATTCATCTACTAT+GGG + tig0019933:76741-76760 None:intergenic 20.0%
!! TATAATATAAGAAGCTTCAT+TGG + tig0019933:77298-77317 None:intergenic 20.0%
!!! TTTAAAATGAGTATGTTGTT+GGG + tig0019933:77322-77341 None:intergenic 20.0%
!!! ATTTAAAATGAGTATGTTGT+TGG + tig0019933:77323-77342 None:intergenic 20.0%
!!! TCATTTTAAATAGCATTGAT+AGG - tig0019933:77332-77351 Msa1377530:five_prime_UTR 20.0%
! AAAAGGGAAAGTTATGATTA+CGG + tig0019933:68554-68573 None:intergenic 25.0%
! AACGTACATTGATAAAAATG+GGG + tig0019933:68627-68646 None:intergenic 25.0%
! GTATATATTTGTAACAGATG+TGG - tig0019933:68777-68796 Msa1377530:intron 25.0%
!! TTCATACAATTTTATCTGGT+TGG + tig0019933:68831-68850 None:intergenic 25.0%
! TCAAAAAATTATCAAAGGAG+AGG - tig0019933:69146-69165 Msa1377530:intron 25.0%
! GTATAATGTTGTAATTGCAA+TGG - tig0019933:69191-69210 Msa1377530:intron 25.0%
! TTAAATCATCAATATCGTCA+AGG + tig0019933:69374-69393 None:intergenic 25.0%
! AATGAAACTATTAAGATGCA+TGG - tig0019933:69396-69415 Msa1377530:CDS 25.0%
!! CATTTAGTTCAAAAATGTTC+TGG - tig0019933:69869-69888 Msa1377530:intron 25.0%
! AATAAAAACTGATCTCTGAA+TGG + tig0019933:70037-70056 None:intergenic 25.0%
! AAATTATCCACTTCAATTGA+TGG + tig0019933:70259-70278 None:intergenic 25.0%
! ATGAGTGATTAAATTACCAA+CGG + tig0019933:70775-70794 None:intergenic 25.0%
!!! TATAAGTATAGCCTTATATG+CGG + tig0019933:70830-70849 None:intergenic 25.0%
! AATCTTTATAAGATGTTGGA+AGG + tig0019933:70892-70911 None:intergenic 25.0%
!! ATAAATAAATCATAGCTTGC+AGG + tig0019933:71138-71157 None:intergenic 25.0%
! AGATAATCAGTACCTTAAAA+AGG - tig0019933:71367-71386 Msa1377530:CDS 25.0%
!! TCTTTTTACAGACCTTTTTA+AGG + tig0019933:71382-71401 None:intergenic 25.0%
!! TTTTTGTCTATTGTTTACAG+TGG - tig0019933:71439-71458 Msa1377530:CDS 25.0%
!! TAACATTTTCCTAAATTGGT+CGG + tig0019933:71828-71847 None:intergenic 25.0%
!! TATTTCTGTCAAAACTAACT+TGG - tig0019933:72018-72037 Msa1377530:intron 25.0%
! TCAACTTTGTACATATCAAA+TGG + tig0019933:72128-72147 None:intergenic 25.0%
! ATGTACAAAGTTGAAATGAT+TGG - tig0019933:72134-72153 Msa1377530:intron 25.0%
!! TAGCTTGTAGATTAGTATTT+CGG + tig0019933:72716-72735 None:intergenic 25.0%
!!! AATATTTTGATCATGGAATC+AGG - tig0019933:72857-72876 Msa1377530:intron 25.0%
!!! ATATTTTGATCATGGAATCA+GGG - tig0019933:72858-72877 Msa1377530:intron 25.0%
! TATCTTCTTCAATTATTTGC+AGG + tig0019933:73087-73106 None:intergenic 25.0%
! AGAAATAGTACAATTTCCAA+GGG + tig0019933:73301-73320 None:intergenic 25.0%
! AAGAAATAGTACAATTTCCA+AGG + tig0019933:73302-73321 None:intergenic 25.0%
!! TTTTGAACACTTGATTTTTC+AGG - tig0019933:73393-73412 Msa1377530:CDS 25.0%
! TGATCAATTCTATTAATGGA+GGG + tig0019933:73480-73499 None:intergenic 25.0%
! TTGATCAATTCTATTAATGG+AGG + tig0019933:73481-73500 None:intergenic 25.0%
! CACATTCAAATAAAATGATG+AGG + tig0019933:73545-73564 None:intergenic 25.0%
! AGCAAAAGTAATATCCAAAA+GGG - tig0019933:73652-73671 Msa1377530:intron 25.0%
! CATCACATTAATACATGATA+TGG + tig0019933:73761-73780 None:intergenic 25.0%
! CATTCATCCACATATTATTA+GGG - tig0019933:73914-73933 Msa1377530:CDS 25.0%
!! AAATTAGACTGATGCTTTTA+CGG - tig0019933:74028-74047 Msa1377530:intron 25.0%
! AATAGGAGAATTAGAAAGAA+AGG - tig0019933:74669-74688 Msa1377530:intron 25.0%
!! ATTTTCCTTTGTATACAGAT+TGG + tig0019933:74733-74752 None:intergenic 25.0%
! GAAAAATATCCATGTTTGTA+TGG - tig0019933:74838-74857 Msa1377530:intron 25.0%
!!! AATCGATTTTCACAAATAGA+AGG + tig0019933:74867-74886 None:intergenic 25.0%
!!! AGTAGTGTTTTTGACATAAA+TGG - tig0019933:75091-75110 Msa1377530:CDS 25.0%
!!! ACTTATATGTCATTTTTGCA+TGG - tig0019933:75277-75296 Msa1377530:intron 25.0%
!!! CTTATATGTCATTTTTGCAT+GGG - tig0019933:75278-75297 Msa1377530:intron 25.0%
!! TGTTCTCAAGAGAAAATTTT+AGG - tig0019933:75408-75427 Msa1377530:CDS 25.0%
! AACACTAAATTTCTTCCAAA+TGG - tig0019933:76085-76104 Msa1377530:intron 25.0%
! TACATTCTTTCATATCCATT+TGG + tig0019933:76103-76122 None:intergenic 25.0%
! ATTCTACTGTTATGTTCAAA+AGG - tig0019933:76505-76524 Msa1377530:intron 25.0%
! GATATAATTCATCTACTATG+GGG + tig0019933:76740-76759 None:intergenic 25.0%
! GAGATATAATTCATCTACTA+TGG + tig0019933:76742-76761 None:intergenic 25.0%
! TGAATTATATCTCTGATGAA+AGG - tig0019933:76749-76768 Msa1377530:intron 25.0%
!!! GGCTTTAACTGTTTAAATTT+TGG + tig0019933:76834-76853 None:intergenic 25.0%
! TTAATGTGAACACATTCAAA+GGG + tig0019933:77252-77271 None:intergenic 25.0%
! TTAAAATGAGTATGTTGTTG+GGG + tig0019933:77321-77340 None:intergenic 25.0%
!! ATTGAACCATTTTTCCAAGA+CGG + tig0019933:68507-68526 None:intergenic 30.0%
AAAGGGAAAGTTATGATTAC+GGG + tig0019933:68553-68572 None:intergenic 30.0%
!!! TTAGACCTATTTTAGGGTTT+AGG - tig0019933:68682-68701 Msa1377530:three_prime_UTR 30.0%
TGTAACCTAAACCCTAAAAT+AGG + tig0019933:68690-68709 None:intergenic 30.0%
! ATTAGAAAGTACATTGAGAG+CGG - tig0019933:68988-69007 Msa1377530:intron 30.0%
GCTGGAAAAAATGTTGAATA+TGG - tig0019933:69078-69097 Msa1377530:intron 30.0%
TGCGGTCAAAAAATTATCAA+AGG - tig0019933:69141-69160 Msa1377530:intron 30.0%
AAAATTATCAAAGGAGAGGT+TGG - tig0019933:69150-69169 Msa1377530:intron 30.0%
!! TTCTTTTTGGTGTGAAAATG+AGG - tig0019933:69261-69280 Msa1377530:intron 30.0%
CAGTAACGTGCTAATTAAAA+TGG - tig0019933:69291-69310 Msa1377530:intron 30.0%
AGCAAAAATCTTAGCTATCA+AGG + tig0019933:69475-69494 None:intergenic 30.0%
! TTTTACTCGAATGATGAGTT+AGG + tig0019933:69648-69667 None:intergenic 30.0%
TAACTCATCATTCGAGTAAA+AGG - tig0019933:69647-69666 Msa1377530:intron 30.0%
TGTGGATGTTCATAAATTTC+TGG - tig0019933:69676-69695 Msa1377530:intron 30.0%
!! TTGGTTGAATGATTTTAGAG+TGG + tig0019933:69808-69827 None:intergenic 30.0%
TATATCATAGTTAAGAGGGA+GGG + tig0019933:69834-69853 None:intergenic 30.0%
TTATATCATAGTTAAGAGGG+AGG + tig0019933:69835-69854 None:intergenic 30.0%
TTGATCTATGCATGAGTTAT+TGG - tig0019933:70105-70124 Msa1377530:intron 30.0%
!!! TATGCATGAGTTATTGGTTT+TGG - tig0019933:70111-70130 Msa1377530:intron 30.0%
! TCTATTGTTGGTAAAATCAC+TGG + tig0019933:70959-70978 None:intergenic 30.0%
ACTGATTATCTGTTTCCTTT+GGG + tig0019933:71358-71377 None:intergenic 30.0%
! TACTGATTATCTGTTTCCTT+TGG + tig0019933:71359-71378 None:intergenic 30.0%
AGTGGTTCAAATCTCAAAAA+GGG - tig0019933:71457-71476 Msa1377530:CDS 30.0%
AAGTTTCACTGTTTGATGTT+TGG + tig0019933:71557-71576 None:intergenic 30.0%
AACATCAAACAGTGAAACTT+TGG - tig0019933:71557-71576 Msa1377530:intron 30.0%
ATTTATACAACGGAATCTTC+AGG + tig0019933:71612-71631 None:intergenic 30.0%
AATCATGACAATTCCTCAAA+TGG + tig0019933:71681-71700 None:intergenic 30.0%
TCTAGTATTCATCTTCTGTA+AGG - tig0019933:71718-71737 Msa1377530:intron 30.0%
AAAAAGGAAATATCAGAGAC+TGG + tig0019933:71991-72010 None:intergenic 30.0%
! AATATGTCTGATTTGTCTAC+TGG - tig0019933:72278-72297 Msa1377530:intron 30.0%
ATTTGTCTACTGGTATTAAC+AGG - tig0019933:72288-72307 Msa1377530:intron 30.0%
TTGTAGATTAGTATTTCGGT+TGG + tig0019933:72712-72731 None:intergenic 30.0%
TATCACTAGAACAATTTGGA+TGG - tig0019933:72795-72814 Msa1377530:intron 30.0%
ATCACTAGAACAATTTGGAT+GGG - tig0019933:72796-72815 Msa1377530:intron 30.0%
ATTGTAGCTATTTACTGTGA+TGG - tig0019933:72897-72916 Msa1377530:intron 30.0%
! TACCCTCTAGAAAAAAAACT+AGG - tig0019933:73012-73031 Msa1377530:intron 30.0%
!!! GACCTAGTTTTTTTTCTAGA+GGG + tig0019933:73017-73036 None:intergenic 30.0%
!!! AGACCTAGTTTTTTTTCTAG+AGG + tig0019933:73018-73037 None:intergenic 30.0%
CAAAAGTTAGAAGATGATGA+TGG + tig0019933:73041-73060 None:intergenic 30.0%
GAAATAGTACAATTTCCAAG+GGG + tig0019933:73300-73319 None:intergenic 30.0%
!!! CACTTGATTTTTCAGGATTA+TGG - tig0019933:73400-73419 Msa1377530:CDS 30.0%
ATCAATTCTATTAATGGAGG+GGG + tig0019933:73478-73497 None:intergenic 30.0%
GATCAATTCTATTAATGGAG+GGG + tig0019933:73479-73498 None:intergenic 30.0%
TCTTTAATGTGGAAACATAC+AGG - tig0019933:73506-73525 Msa1377530:CDS 30.0%
ATTGATCTCAAATTCCATCA+TGG + tig0019933:73605-73624 None:intergenic 30.0%
GAGCAAAAGTAATATCCAAA+AGG - tig0019933:73651-73670 Msa1377530:intron 30.0%
! ATTGTGTTAACATACCCTTT+TGG + tig0019933:73669-73688 None:intergenic 30.0%
! AGTCTCTCATTTTCTTTCAT+TGG - tig0019933:73720-73739 Msa1377530:intron 30.0%
TAATATGTGGATGAATGGAA+GGG + tig0019933:73911-73930 None:intergenic 30.0%
ATAATATGTGGATGAATGGA+AGG + tig0019933:73912-73931 None:intergenic 30.0%
CCTAATAATATGTGGATGAA+TGG + tig0019933:73916-73935 None:intergenic 30.0%
CCATTCATCCACATATTATT+AGG - tig0019933:73913-73932 Msa1377530:CDS 30.0%
!! TGAGGATGATTTTAAGTCAA+AGG - tig0019933:73938-73957 Msa1377530:intron 30.0%
TACATCATTTGTATCGTGTT+AGG - tig0019933:73990-74009 Msa1377530:intron 30.0%
TTATGTACTTTAGTCAGTCA+TGG + tig0019933:74071-74090 None:intergenic 30.0%
CTGACTAAAGTACATAACTT+TGG - tig0019933:74074-74093 Msa1377530:CDS 30.0%
!!! AATAGTCTTGCTTTTTTGTC+AGG - tig0019933:74153-74172 Msa1377530:CDS 30.0%
! TTTTTGTCAGGTGAAAATGT+TGG - tig0019933:74165-74184 Msa1377530:CDS 30.0%
! GGCTATTTCAATATCTTGAA+GGG + tig0019933:74194-74213 None:intergenic 30.0%
! AGGCTATTTCAATATCTTGA+AGG + tig0019933:74195-74214 None:intergenic 30.0%
ACATACGGTATGTCTATATT+TGG - tig0019933:74360-74379 Msa1377530:CDS 30.0%
TATTTGTGTGCTCATATTTC+TGG - tig0019933:74395-74414 Msa1377530:CDS 30.0%
!!! GTTTTTTCACTTGAAAGAGA+AGG - tig0019933:74503-74522 Msa1377530:intron 30.0%
ATAAGTCAAGATGACTCATT+TGG + tig0019933:74779-74798 None:intergenic 30.0%
TATACCATGCTGAATTAATG+CGG + tig0019933:75030-75049 None:intergenic 30.0%
ATATTGGAAGAATTTCACGA+GGG + tig0019933:75343-75362 None:intergenic 30.0%
TATATTGGAAGAATTTCACG+AGG + tig0019933:75344-75363 None:intergenic 30.0%
TATGGAGTGATCAGATATAT+TGG + tig0019933:75359-75378 None:intergenic 30.0%
AATATATCTGATCACTCCAT+AGG - tig0019933:75358-75377 Msa1377530:CDS 30.0%
ATATATCTGATCACTCCATA+GGG - tig0019933:75359-75378 Msa1377530:CDS 30.0%
GTGAATTACAATAACTAGGA+TGG - tig0019933:75477-75496 Msa1377530:CDS 30.0%
ATTATAGTATTGCTACGGAA+AGG + tig0019933:75728-75747 None:intergenic 30.0%
ATTATAGTATTGCTACGGAA+AGG + tig0019933:75728-75747 None:intergenic 30.0%
ACTGATAAGAAAAATCCTGT+TGG - tig0019933:75898-75917 Msa1377530:intron 30.0%
! TATTAGTTTATAAGGGCATG+TGG - tig0019933:76007-76026 Msa1377530:intron 30.0%
AAGCTTAAAACTTACTTGAG+CGG + tig0019933:76339-76358 None:intergenic 30.0%
! AACCAAACTATAGTCGATTT+CGG + tig0019933:76550-76569 None:intergenic 30.0%
TAAACTGCAATTCTTGTTGA+AGG - tig0019933:76926-76945 Msa1377530:intron 30.0%
!!! TACGAAGTAGTTTTTTGACA+AGG - tig0019933:77012-77031 Msa1377530:intron 30.0%
!!! AGATCTTTCACCTCTTTTTT+TGG - tig0019933:77102-77121 Msa1377530:intron 30.0%
!!! GATCTTTCACCTCTTTTTTT+GGG - tig0019933:77103-77122 Msa1377530:intron 30.0%
CTTAATGTGAACACATTCAA+AGG + tig0019933:77253-77272 None:intergenic 30.0%
!!! CTTCATTGGTGTTTTTTAGA+AGG + tig0019933:77284-77303 None:intergenic 30.0%
!! CTTTTTCACTTCTTTGTTTG+AGG - tig0019933:77356-77375 Msa1377530:five_prime_UTR 30.0%
CTATATAATAAGAGAGGGTG+AGG - tig0019933:68324-68343 Msa1377530:three_prime_UTR 35.0%
! GACCTGATGAACTTTCTTTT+TGG - tig0019933:69248-69267 Msa1377530:intron 35.0%
CACCAAAAAGAAAGTTCATC+AGG + tig0019933:69253-69272 None:intergenic 35.0%
ATCAAAGATTTAACACGCGA+TGG + tig0019933:69530-69549 None:intergenic 35.0%
! TCGAGTAAAAGGAAGTTTTG+TGG - tig0019933:69658-69677 Msa1377530:intron 35.0%
GAATTAGTGAATAGTCAGTG+AGG + tig0019933:70146-70165 None:intergenic 35.0%
ACTATCTCCATCAATTGAAG+TGG - tig0019933:70249-70268 Msa1377530:intron 35.0%
! ATTGAAGTGGATAATTTGCC+TGG - tig0019933:70262-70281 Msa1377530:intron 35.0%
TCTCTCATCTTCTGATCAAT+CGG - tig0019933:70294-70313 Msa1377530:intron 35.0%
AAAGACCATCCTACAAAAAG+AGG - tig0019933:70337-70356 Msa1377530:intron 35.0%
! TTTCTCACCATTTTCCTTTC+AGG - tig0019933:70413-70432 Msa1377530:intron 35.0%
AGAAAGGGACAGTAACATAA+TGG + tig0019933:70927-70946 None:intergenic 35.0%
AAGAAAATCTAGCATGTCCA+TGG - tig0019933:71047-71066 Msa1377530:intron 35.0%
! TATTGTCATTTCAGTGCTGA+TGG - tig0019933:71179-71198 Msa1377530:CDS 35.0%
CAGTGGTTCAAATCTCAAAA+AGG - tig0019933:71456-71475 Msa1377530:CDS 35.0%
AAAAAGGGAAGAAACCAACT+AGG - tig0019933:71472-71491 Msa1377530:CDS 35.0%
ACAATTCCTCAAATGGTTTG+GGG + tig0019933:71674-71693 None:intergenic 35.0%
GACAATTCCTCAAATGGTTT+GGG + tig0019933:71675-71694 None:intergenic 35.0%
TGACAATTCCTCAAATGGTT+TGG + tig0019933:71676-71695 None:intergenic 35.0%
AAACGCAAAATTGATGCAGT+AGG - tig0019933:71761-71780 Msa1377530:CDS 35.0%
CTTCATGCAAAAGTGAAGAA+AGG - tig0019933:71791-71810 Msa1377530:CDS 35.0%
ACTTACAGATACTAACTGCT+TGG - tig0019933:71900-71919 Msa1377530:intron 35.0%
TTAAGGATGAAGTTGAGATG+CGG - tig0019933:71938-71957 Msa1377530:intron 35.0%
GAAAATACCAATAGTCAGAG+AGG - tig0019933:72064-72083 Msa1377530:CDS 35.0%
AAATAGTCCTCTCTGACTAT+TGG + tig0019933:72074-72093 None:intergenic 35.0%
AATAGTCAGAGAGGACTATT+TGG - tig0019933:72073-72092 Msa1377530:CDS 35.0%
CAAAGTTGAAATGATTGGTG+AGG - tig0019933:72139-72158 Msa1377530:intron 35.0%
GAATGGTGAAAAAGAGAAGA+TGG + tig0019933:72324-72343 None:intergenic 35.0%
!! TCATTGACTTTCTCTCCAAT+TGG + tig0019933:72533-72552 None:intergenic 35.0%
TTGGAGAGAAAGTCAATGAA+AGG - tig0019933:72534-72553 Msa1377530:CDS 35.0%
TGGAGAGAAAGTCAATGAAA+GGG - tig0019933:72535-72554 Msa1377530:CDS 35.0%
GTACATGAAACTATCTGTAG+AGG - tig0019933:72628-72647 Msa1377530:intron 35.0%
! TTCTAGTGATAGTGCAGTTT+CGG + tig0019933:72786-72805 None:intergenic 35.0%
GCACTATCACTAGAACAATT+TGG - tig0019933:72791-72810 Msa1377530:intron 35.0%
! TTTACTGTGATGGTGACTAA+TGG - tig0019933:72907-72926 Msa1377530:intron 35.0%
! TTACTGTGATGGTGACTAAT+GGG - tig0019933:72908-72927 Msa1377530:intron 35.0%
! AGGATGTAGTAGCTTTACAT+GGG + tig0019933:73067-73086 None:intergenic 35.0%
! CGACTATTCTTTGAGAAAAC+TGG - tig0019933:73217-73236 Msa1377530:intron 35.0%
GATCAAGATGCTCTTTAATG+TGG - tig0019933:73495-73514 Msa1377530:CDS 35.0%
CTGTTAATGCTTCAAAACCT+GGG + tig0019933:73797-73816 None:intergenic 35.0%
TCTGTTAATGCTTCAAAACC+TGG + tig0019933:73798-73817 None:intergenic 35.0%
TCCACATATTATTAGGGATG+AGG - tig0019933:73920-73939 Msa1377530:CDS 35.0%
TCCTCATCCCTAATAATATG+TGG + tig0019933:73924-73943 None:intergenic 35.0%
ACTCAAATGCATAAAACCAC+AGG + tig0019933:74112-74131 None:intergenic 35.0%
TGAAATAGCCTCAAGATTAG+TGG - tig0019933:74204-74223 Msa1377530:CDS 35.0%
GAAATAGCCTCAAGATTAGT+GGG - tig0019933:74205-74224 Msa1377530:CDS 35.0%
CTAAAATCTTCACTGTCATG+AGG + tig0019933:74301-74320 None:intergenic 35.0%
TATAGACATACCGTATGTGT+GGG + tig0019933:74358-74377 None:intergenic 35.0%
ATATAGACATACCGTATGTG+TGG + tig0019933:74359-74378 None:intergenic 35.0%
TATTTGTAATCCGTCTACAC+AGG - tig0019933:74457-74476 Msa1377530:CDS 35.0%
! TACAGATTGGAAGGTTCTAA+AGG + tig0019933:74720-74739 None:intergenic 35.0%
ACCTTCCAATCTGTATACAA+AGG - tig0019933:74725-74744 Msa1377530:intron 35.0%
TCCTTTGTATACAGATTGGA+AGG + tig0019933:74729-74748 None:intergenic 35.0%
!! ACTCATTTGGTCTTTTCATG+TGG + tig0019933:74766-74785 None:intergenic 35.0%
AGAAGGATACCATACAAACA+TGG + tig0019933:74850-74869 None:intergenic 35.0%
ATACCATGCTGAATTAATGC+GGG + tig0019933:75029-75048 None:intergenic 35.0%
GCATTAATTCAGCATGGTAT+AGG - tig0019933:75029-75048 Msa1377530:CDS 35.0%
TAACAAAAAACCCCAGTTTC+TGG - tig0019933:75453-75472 Msa1377530:CDS 35.0%
AACAAAAAACCCCAGTTTCT+GGG - tig0019933:75454-75473 Msa1377530:CDS 35.0%
TGGGGTGAATTACAATAACT+AGG - tig0019933:75473-75492 Msa1377530:CDS 35.0%
! AATATCTTTTGCCTGCAGTT+TGG - tig0019933:75823-75842 Msa1377530:intron 35.0%
!! CTTAAAAGCATTAGACCAAC+AGG + tig0019933:75916-75935 None:intergenic 35.0%
GTATGAGCTCAAAAAAGCTA+AGG - tig0019933:75957-75976 Msa1377530:intron 35.0%
TCAAAAAAGCTAAGGTCAGT+TGG - tig0019933:75965-75984 Msa1377530:intron 35.0%
TTAGTAGAATGCTTTCCTTG+CGG + tig0019933:76179-76198 None:intergenic 35.0%
!! CAAGGAAAGCATTCTACTAA+AGG - tig0019933:76179-76198 Msa1377530:intron 35.0%
! AAAGCATTCTACTAAAGGAC+TGG - tig0019933:76184-76203 Msa1377530:intron 35.0%
AAGCATTCTACTAAAGGACT+GGG - tig0019933:76185-76204 Msa1377530:intron 35.0%
TTTGCATATTCAGATTCCAG+GGG + tig0019933:76221-76240 None:intergenic 35.0%
CTTTGCATATTCAGATTCCA+GGG + tig0019933:76222-76241 None:intergenic 35.0%
ACTTTGCATATTCAGATTCC+AGG + tig0019933:76223-76242 None:intergenic 35.0%
TGGAATCTGAATATGCAAAG+TGG - tig0019933:76222-76241 Msa1377530:intron 35.0%
TACAAGCAAACATGCTAACA+TGG - tig0019933:76692-76711 Msa1377530:CDS 35.0%
! TGAATGTAAACCTTTTGTGC+AGG - tig0019933:76902-76921 Msa1377530:intron 35.0%
ACAAACACACCCAAAAAAAG+AGG + tig0019933:77115-77134 None:intergenic 35.0%
GAACAGAACACACTTCAACT+CGG + tig0019933:68366-68385 None:intergenic 40.0%
AAAGCAGAGTACGCAAAATC+AGG - tig0019933:68433-68452 Msa1377530:three_prime_UTR 40.0%
GTTCAATCCTCCAAATTCGA+TGG - tig0019933:68520-68539 Msa1377530:three_prime_UTR 40.0%
AAGTTATGATTACGGGCATG+AGG + tig0019933:68546-68565 None:intergenic 40.0%
TCTTCAATATGCACTCAGCA+TGG + tig0019933:68805-68824 None:intergenic 40.0%
TTTGAACCAGCATTCGACTT+CGG + tig0019933:69033-69052 None:intergenic 40.0%
! AGCGTGTGTGTCTTGTTAAT+TGG - tig0019933:69226-69245 Msa1377530:intron 40.0%
! AGGCTATCTAGAGAGGATTT+TGG + tig0019933:69628-69647 None:intergenic 40.0%
ATGAGTTAGGCTATCTAGAG+AGG + tig0019933:69635-69654 None:intergenic 40.0%
! AAGTGGATAATTTGCCTGGA+TGG - tig0019933:70266-70285 Msa1377530:intron 40.0%
! TACCTCCTCTTTTTGTAGGA+TGG + tig0019933:70345-70364 None:intergenic 40.0%
TCCTACAAAAAGAGGAGGTA+TGG - tig0019933:70345-70364 Msa1377530:intron 40.0%
! ACCATACCTCCTCTTTTTGT+AGG + tig0019933:70349-70368 None:intergenic 40.0%
GTGAATGATATGCTGCAGAA+CGG - tig0019933:70367-70386 Msa1377530:intron 40.0%
ACTACCACCTGAAAGGAAAA+TGG + tig0019933:70423-70442 None:intergenic 40.0%
!! ATTTTCCTTTCAGGTGGTAG+TGG - tig0019933:70422-70441 Msa1377530:intron 40.0%
TTTGGAAGAGGATTGTTGTG+TGG + tig0019933:70480-70499 None:intergenic 40.0%
ACACAACAATCCTCTTCCAA+AGG - tig0019933:70479-70498 Msa1377530:intron 40.0%
GTGAAAAATGCTGATGACTC+CGG - tig0019933:70593-70612 Msa1377530:intron 40.0%
TGAAAAATGCTGATGACTCC+GGG - tig0019933:70594-70613 Msa1377530:intron 40.0%
ACGTGATCTTGAGAATAGAC+TGG - tig0019933:70622-70641 Msa1377530:intron 40.0%
TGATCTTGAGAATAGACTGG+AGG - tig0019933:70625-70644 Msa1377530:intron 40.0%
TCCTGTTGAATCTTGACCAT+TGG + tig0019933:70732-70751 None:intergenic 40.0%
CACTGGCATCTTAGTAGAAA+GGG + tig0019933:70942-70961 None:intergenic 40.0%
TCACTGGCATCTTAGTAGAA+AGG + tig0019933:70943-70962 None:intergenic 40.0%
CAAAGAAAGCAGAATGGATC+TGG + tig0019933:71094-71113 None:intergenic 40.0%
CCATCACAAAGAAAGCAGAA+TGG + tig0019933:71100-71119 None:intergenic 40.0%
CCATTCTGCTTTCTTTGTGA+TGG - tig0019933:71097-71116 Msa1377530:intron 40.0%
!! AGTGCTGATGGAATGATGTT+TGG - tig0019933:71191-71210 Msa1377530:CDS 40.0%
AAACCATCACATAGAGAGCA+AGG + tig0019933:71227-71246 None:intergenic 40.0%
! GATGGTTTTCTGCGTTATTC+TGG - tig0019933:71239-71258 Msa1377530:intron 40.0%
! GTTATTCTGGAGGAATGTAC+CGG - tig0019933:71252-71271 Msa1377530:intron 40.0%
GTAGGAACATTTACTCCACT+CGG + tig0019933:71294-71313 None:intergenic 40.0%
! ACAGAAGTTTGACTTTCAGC+AGG + tig0019933:71525-71544 None:intergenic 40.0%
GCTGAAAGTCAAACTTCTGT+AGG - tig0019933:71525-71544 Msa1377530:intron 40.0%
ATTTGAGAGTTGCCATCTCT+GGG - tig0019933:71583-71602 Msa1377530:intron 40.0%
TTCATTCCCCAAACCATTTG+AGG - tig0019933:71665-71684 Msa1377530:intron 40.0%
!! CTTCTGTAAGGTGCTTTTAC+AGG - tig0019933:71730-71749 Msa1377530:intron 40.0%
! CATTTTCCTAAATTGGTCGG+TGG + tig0019933:71825-71844 None:intergenic 40.0%
TACAGATACTAACTGCTTGG+TGG - tig0019933:71903-71922 Msa1377530:intron 40.0%
CTTGGAAGAGTTTGATCTGT+AGG - tig0019933:72036-72055 Msa1377530:CDS 40.0%
GGACTATTTGGTTGACTGTA+TGG - tig0019933:72085-72104 Msa1377530:intron 40.0%
ATGGTCACCATCAAAGTCAA+GGG - tig0019933:72170-72189 Msa1377530:CDS 40.0%
! TTTTCCCTTCCTCTAGTATG+TGG + tig0019933:72238-72257 None:intergenic 40.0%
GTCTACTGGTATTAACAGGT+TGG - tig0019933:72292-72311 Msa1377530:intron 40.0%
AATCACAAACTGCTATTCCC+TGG + tig0019933:72370-72389 None:intergenic 40.0%
GGAGAGAAAGTCAATGAAAG+GGG - tig0019933:72536-72555 Msa1377530:CDS 40.0%
GAGAGAAAGTCAATGAAAGG+GGG - tig0019933:72537-72556 Msa1377530:CDS 40.0%
TTGTTACGCAGCAGTTAGTT+AGG + tig0019933:72668-72687 None:intergenic 40.0%
! CAGGATGTAGTAGCTTTACA+TGG + tig0019933:73068-73087 None:intergenic 40.0%
ATTGCTACGTGTTTCGCAAA+TGG - tig0019933:73116-73135 Msa1377530:intron 40.0%
TTGCTACGTGTTTCGCAAAT+GGG - tig0019933:73117-73136 Msa1377530:intron 40.0%
TGGGAAATGACAAGATTGGA+GGG - tig0019933:73146-73165 Msa1377530:intron 40.0%
TGTCGAAATCTGATGCAATC+AGG - tig0019933:73185-73204 Msa1377530:intron 40.0%
GTCGAAATCTGATGCAATCA+GGG - tig0019933:73186-73205 Msa1377530:intron 40.0%
TTGAGAAAACTGGAAACCCT+TGG - tig0019933:73227-73246 Msa1377530:intron 40.0%
TGAGAAAACTGGAAACCCTT+GGG - tig0019933:73228-73247 Msa1377530:intron 40.0%
! CTGAATAGTCTTTTGTTCCC+AGG + tig0019933:73257-73276 None:intergenic 40.0%
AAGACTATTCAGAAGCAACC+TGG - tig0019933:73265-73284 Msa1377530:intron 40.0%
AGACTATTCAGAAGCAACCT+GGG - tig0019933:73266-73285 Msa1377530:intron 40.0%
GGATATCATTTCCACACATC+AGG - tig0019933:73349-73368 Msa1377530:intron 40.0%
GATCTCAAATTCCATCATGG+CGG + tig0019933:73602-73621 None:intergenic 40.0%
AATATGTCCGAAATGCCACT+TGG - tig0019933:73622-73641 Msa1377530:intron 40.0%
! ATATGTCCGAAATGCCACTT+GGG - tig0019933:73623-73642 Msa1377530:intron 40.0%
TGCTCATTGATGCTAGCAAT+AGG - tig0019933:73871-73890 Msa1377530:intron 40.0%
AAGTACATAACTTTGGACCG+TGG - tig0019933:74081-74100 Msa1377530:CDS 40.0%
TAAAACCACAGGCAAAACCA+CGG + tig0019933:74101-74120 None:intergenic 40.0%
GTCAAATCCCACTAATCTTG+AGG + tig0019933:74215-74234 None:intergenic 40.0%
GAAGTGGAGATATATCACAG+TGG + tig0019933:74279-74298 None:intergenic 40.0%
ATAGACATACCGTATGTGTG+GGG + tig0019933:74357-74376 None:intergenic 40.0%
TGCCAACTTTGTCTCTGTAA+GGG + tig0019933:74547-74566 None:intergenic 40.0%
TTGCCAACTTTGTCTCTGTA+AGG + tig0019933:74548-74567 None:intergenic 40.0%
! TCCTATGGCATGGTAAGTTT+TGG - tig0019933:74576-74595 Msa1377530:intron 40.0%
ACCAAAACTTACCATGCCAT+AGG + tig0019933:74580-74599 None:intergenic 40.0%
GACAAGCGAATGTGCTTAAA+CGG - tig0019933:74942-74961 Msa1377530:CDS 40.0%
ACAAGCGAATGTGCTTAAAC+GGG - tig0019933:74943-74962 Msa1377530:CDS 40.0%
GGGACATTTACAGGTTGTTA+AGG + tig0019933:75323-75342 None:intergenic 40.0%
ATTTCACGAGGGACATTTAC+AGG + tig0019933:75332-75351 None:intergenic 40.0%
GTAGTATCTTACCATCCCTA+TGG + tig0019933:75377-75396 None:intergenic 40.0%
GTAAGATACTACTAGACCAG+AGG - tig0019933:75385-75404 Msa1377530:CDS 40.0%
! TTTTCTCTTGAGAACACCTC+TGG + tig0019933:75404-75423 None:intergenic 40.0%
ACAAAAAACCCCAGTTTCTG+GGG - tig0019933:75455-75474 Msa1377530:CDS 40.0%
TGTAATTCACCCCAGAAACT+GGG + tig0019933:75467-75486 None:intergenic 40.0%
TTGTAATTCACCCCAGAAAC+TGG + tig0019933:75468-75487 None:intergenic 40.0%
TAACTAGGATGGATATTCCG+TGG - tig0019933:75488-75507 Msa1377530:CDS 40.0%
ACGACAATGTTCTCTACTTC+AGG - tig0019933:75570-75589 Msa1377530:intron 40.0%
! TGTTCTCTACTTCAGGTTCT+AGG - tig0019933:75577-75596 Msa1377530:intron 40.0%
! TTCTAGGTTGACGAACTTTG+TGG - tig0019933:75593-75612 Msa1377530:intron 40.0%
! TCTAGGTTGACGAACTTTGT+GGG - tig0019933:75594-75613 Msa1377530:intron 40.0%
TTTGTGGGCATTCTTAACCA+AGG - tig0019933:75609-75628 Msa1377530:intron 40.0%
!! CTTTTAAGTGAAGTTGCCCT+TGG - tig0019933:75928-75947 Msa1377530:intron 40.0%
GAGCTCATACACATTTCCAA+GGG + tig0019933:75947-75966 None:intergenic 40.0%
TGAGCTCATACACATTTCCA+AGG + tig0019933:75948-75967 None:intergenic 40.0%
TATATGGATAAACCTCCGCA+AGG - tig0019933:76161-76180 Msa1377530:intron 40.0%
GTGGGAAAATTTCTACTACC+TGG - tig0019933:76419-76438 Msa1377530:intron 40.0%
AGCCGAAATCGACTATAGTT+TGG - tig0019933:76545-76564 Msa1377530:CDS 40.0%
AAGCAAACATGCTAACATGG+AGG - tig0019933:76695-76714 Msa1377530:CDS 40.0%
TGCAGTTTAACCTGCACAAA+AGG + tig0019933:76915-76934 None:intergenic 40.0%
TGCAATTCTTGTTGAAGGTG+AGG - tig0019933:76931-76950 Msa1377530:intron 40.0%
AGGTTCCATCACAAGAAATG+AGG - tig0019933:76951-76970 Msa1377530:intron 40.0%
TCCATCACAAGAAATGAGGA+TGG - tig0019933:76955-76974 Msa1377530:intron 40.0%
TCCATCCTCATTTCTTGTGA+TGG + tig0019933:76959-76978 None:intergenic 40.0%
GAAATGAGGATGGAAACTAG+AGG - tig0019933:76965-76984 Msa1377530:intron 40.0%
!!! AAACTAGAGGTGTGCTGTTT+TGG - tig0019933:76978-76997 Msa1377530:intron 40.0%
!!! AACTAGAGGTGTGCTGTTTT+GGG - tig0019933:76979-76998 Msa1377530:intron 40.0%
GACTTGTACATAGTCCATGT+GGG - tig0019933:77034-77053 Msa1377530:intron 40.0%
TCTCGTAACTTCTCGTGATA+AGG - tig0019933:77059-77078 Msa1377530:intron 40.0%
!!! AGGTCTCATTTTGAGTTGAC+TGG - tig0019933:77079-77098 Msa1377530:intron 40.0%
CAGAAATCTCATGCATGATC+TGG - tig0019933:77171-77190 Msa1377530:CDS 40.0%
TTTGCGTACTCTGCTTTCCA+TGG + tig0019933:68430-68449 None:intergenic 45.0%
! TTTTCCAAGACGGAGCTTCT+CGG + tig0019933:68497-68516 None:intergenic 45.0%
GAAGCTCCGTCTTGGAAAAA+TGG - tig0019933:68498-68517 Msa1377530:three_prime_UTR 45.0%
AGAACTTAGAGTCGCTTCGT+TGG - tig0019933:68950-68969 Msa1377530:intron 45.0%
GAACTTAGAGTCGCTTCGTT+GGG - tig0019933:68951-68970 Msa1377530:intron 45.0%
! AGAAAGTACATTGAGAGCGG+TGG - tig0019933:68991-69010 Msa1377530:intron 45.0%
! TTTTCCAGCACTCGACTTAG+AGG + tig0019933:69067-69086 None:intergenic 45.0%
TTGATCACGTCCTGTCATTC+AGG - tig0019933:69545-69564 Msa1377530:intron 45.0%
CGATTCTAGTCCTGAATGAC+AGG + tig0019933:69558-69577 None:intergenic 45.0%
TAGTTAAGAGGGAGGGAAGT+TGG + tig0019933:69827-69846 None:intergenic 45.0%
CGCATATCTACTAAGCCTGA+TGG - tig0019933:70178-70197 Msa1377530:intron 45.0%
TCTACTAAGCCTGATGGTCA+AGG - tig0019933:70184-70203 Msa1377530:intron 45.0%
GTTCCAAGAGACACTTAGCA+TGG + tig0019933:70231-70250 None:intergenic 45.0%
CTCATCTTCTGATCAATCGG+CGG - tig0019933:70297-70316 Msa1377530:intron 45.0%
GACCATCCTACAAAAAGAGG+AGG - tig0019933:70340-70359 Msa1377530:intron 45.0%
! CTCACCATTTTCCTTTCAGG+TGG - tig0019933:70416-70435 Msa1377530:intron 45.0%
TTGTACCACTACCACCTGAA+AGG + tig0019933:70430-70449 None:intergenic 45.0%
!! TGGTAGTGGTACAAATGTCG+AGG - tig0019933:70436-70455 Msa1377530:intron 45.0%
CAACAATCCTCTTCCAAAGG+TGG - tig0019933:70482-70501 Msa1377530:intron 45.0%
! TTTAGTGCCACCTTTGGAAG+AGG + tig0019933:70492-70511 None:intergenic 45.0%
CTTCCAAAGGTGGCACTAAA+CGG - tig0019933:70492-70511 Msa1377530:intron 45.0%
TTCCAAAGGTGGCACTAAAC+GGG - tig0019933:70493-70512 Msa1377530:intron 45.0%
AGAGGGTGAGCAAAAGTCAA+AGG - tig0019933:70526-70545 Msa1377530:intron 45.0%
TCAAAGGCCGCTAAAGTCAA+GGG - tig0019933:70542-70561 Msa1377530:intron 45.0%
CACATCTCCCTTGACTTTAG+CGG + tig0019933:70552-70571 None:intergenic 45.0%
GAAAAATGCTGATGACTCCG+GGG - tig0019933:70595-70614 Msa1377530:intron 45.0%
GCCAATGGTCAAGATTCAAC+AGG - tig0019933:70728-70747 Msa1377530:intron 45.0%
ATATGCGGCAGAGCTTCTTA+AGG + tig0019933:70815-70834 None:intergenic 45.0%
AAGAAGCTCTGCCGCATATA+AGG - tig0019933:70816-70835 Msa1377530:intron 45.0%
ATCTAGCATGTCCATGGTTG+TGG - tig0019933:71053-71072 Msa1377530:intron 45.0%
TATGACCTCATCCACAACCA+TGG + tig0019933:71067-71086 None:intergenic 45.0%
GCTGATGGAATGATGTTTGG+AGG - tig0019933:71194-71213 Msa1377530:CDS 45.0%
AGTCCTTGCTCTCTATGTGA+TGG - tig0019933:71221-71240 Msa1377530:intron 45.0%
! GGTTTTCTGCGTTATTCTGG+AGG - tig0019933:71242-71261 Msa1377530:intron 45.0%
AGGGAAGTGGAAAATCCCAA+AGG - tig0019933:71340-71359 Msa1377530:CDS 45.0%
GATTTGAGAGTTGCCATCTC+TGG - tig0019933:71582-71601 Msa1377530:intron 45.0%
!! CTGTAAGGTGCTTTTACAGG+TGG - tig0019933:71733-71752 Msa1377530:intron 45.0%
! AGGTGCTTTTACAGGTGGAA+TGG - tig0019933:71738-71757 Msa1377530:CDS 45.0%
CGCAAAATTGATGCAGTAGG+TGG - tig0019933:71764-71783 Msa1377530:CDS 45.0%
CATGGTCACCATCAAAGTCA+AGG - tig0019933:72169-72188 Msa1377530:CDS 45.0%
TGGTCACCATCAAAGTCAAG+GGG - tig0019933:72171-72190 Msa1377530:CDS 45.0%
ACTTTGCCCCTTGACTTTGA+TGG + tig0019933:72180-72199 None:intergenic 45.0%
! AGTGCTGTTCATGATGCTTC+TGG - tig0019933:72197-72216 Msa1377530:CDS 45.0%
CAGTGATCGTCATCTTCAGA+AGG + tig0019933:72510-72529 None:intergenic 45.0%
AGATGACGATCACTGCCAAT+TGG - tig0019933:72515-72534 Msa1377530:CDS 45.0%
AAAGTCAATGAAAGGGGGAC+AGG - tig0019933:72542-72561 Msa1377530:CDS 45.0%
TAGTGCAGTTTCGGTTGTAG+TGG + tig0019933:72777-72796 None:intergenic 45.0%
TGCTACGTGTTTCGCAAATG+GGG - tig0019933:73118-73137 Msa1377530:intron 45.0%
CGAGTGGGAAATGACAAGAT+TGG - tig0019933:73142-73161 Msa1377530:intron 45.0%
GTGGGAAATGACAAGATTGG+AGG - tig0019933:73145-73164 Msa1377530:intron 45.0%
CAAGATTGGAGGGAACAAAC+TGG - tig0019933:73156-73175 Msa1377530:intron 45.0%
CTGAATATCGACCTGATGTG+TGG + tig0019933:73363-73382 None:intergenic 45.0%
! GTTTTGTAGATCCGCCATGA+TGG - tig0019933:73588-73607 Msa1377530:CDS 45.0%
CAGTTTCCCAAGTGGCATTT+CGG + tig0019933:73632-73651 None:intergenic 45.0%
! CTTTTGCTCAGTTTCCCAAG+TGG + tig0019933:73640-73659 None:intergenic 45.0%
ATGCTTCAAAACCTGGGATG+AGG + tig0019933:73791-73810 None:intergenic 45.0%
CAATGCTGATCCATCAGTCA+GGG - tig0019933:73842-73861 Msa1377530:intron 45.0%
ATCAATGGAGTCGTCGTTGT+TGG + tig0019933:74239-74258 None:intergenic 45.0%
TCTTCACTGTCATGAGGAAG+TGG + tig0019933:74295-74314 None:intergenic 45.0%
TAGACATACCGTATGTGTGG+GGG + tig0019933:74356-74375 None:intergenic 45.0%
GCCAACTTTGTCTCTGTAAG+GGG + tig0019933:74546-74565 None:intergenic 45.0%
TTGGCAACAGAATGCTCCTA+TGG - tig0019933:74561-74580 Msa1377530:intron 45.0%
AACAGAATGCTCCTATGGCA+TGG - tig0019933:74566-74585 Msa1377530:intron 45.0%
TGACCCGCATTAATTCAGCA+TGG - tig0019933:75023-75042 Msa1377530:CDS 45.0%
ATCTGATCACTCCATAGGGA+TGG - tig0019933:75363-75382 Msa1377530:CDS 45.0%
GTAATTCACCCCAGAAACTG+GGG + tig0019933:75466-75485 None:intergenic 45.0%
CTGTAGTATGCACGTTACCA+CGG + tig0019933:75508-75527 None:intergenic 45.0%
AACCATATAGCCAGTTGCTG+GGG + tig0019933:75658-75677 None:intergenic 45.0%
GAACCATATAGCCAGTTGCT+GGG + tig0019933:75659-75678 None:intergenic 45.0%
AGAACCATATAGCCAGTTGC+TGG + tig0019933:75660-75679 None:intergenic 45.0%
! TTTTGCCTGCAGTTTGGCAA+AGG - tig0019933:75829-75848 Msa1377530:intron 45.0%
TTTGCCTGCAGTTTGGCAAA+GGG - tig0019933:75830-75849 Msa1377530:intron 45.0%
AAATCCCTTTGCCAAACTGC+AGG + tig0019933:75837-75856 None:intergenic 45.0%
ATGATGTCGTTGTTCCCTGT+GGG - tig0019933:76249-76268 Msa1377530:intron 45.0%
!! ACCGGTGTCATCAAATGTCA+AGG - tig0019933:76274-76293 Msa1377530:intron 45.0%
! GCCTTGACATTTGATGACAC+CGG + tig0019933:76278-76297 None:intergenic 45.0%
ATAGCACGTCAATGATAGCC+AGG + tig0019933:76440-76459 None:intergenic 45.0%
ATCTACTATGGGGTGAGAAG+GGG + tig0019933:76730-76749 None:intergenic 45.0%
CATCTACTATGGGGTGAGAA+GGG + tig0019933:76731-76750 None:intergenic 45.0%
TCATCTACTATGGGGTGAGA+AGG + tig0019933:76732-76751 None:intergenic 45.0%
!!! ACTAGAGGTGTGCTGTTTTG+GGG - tig0019933:76980-76999 Msa1377530:intron 45.0%
GGACTTGTACATAGTCCATG+TGG - tig0019933:77033-77052 Msa1377530:intron 45.0%
GAAGTTACGAGAATCCCACA+TGG + tig0019933:77051-77070 None:intergenic 45.0%
! TTGGGTGTGTTTGTTAGTGC+AGG - tig0019933:77121-77140 Msa1377530:intron 45.0%
! TGGGTGTGTTTGTTAGTGCA+GGG - tig0019933:77122-77141 Msa1377530:intron 45.0%
!!! ATTAAAGTTTTTTTTTTTTT+TGG - tig0019933:70853-70872 Msa1377530:intron 5.0%
!! GTATATAAATAAATAAATAA+TGG + tig0019933:73973-73992 None:intergenic 5.0%
!! TGTAATAAAATAAAATAAAT+AGG - tig0019933:74652-74671 Msa1377530:intron 5.0%
!!! TATATGTATTTTTTTTTTTT+TGG - tig0019933:76857-76876 Msa1377530:CDS 5.0%
! TCCATGGCTTCGCGTTTTGA+GGG + tig0019933:68414-68433 None:intergenic 50.0%
! TTCCATGGCTTCGCGTTTTG+AGG + tig0019933:68415-68434 None:intergenic 50.0%
GGTTGCAATGGTACTCTTGC+AGG + tig0019933:68476-68495 None:intergenic 50.0%
CATGAGGCCATCGAATTTGG+AGG + tig0019933:68530-68549 None:intergenic 50.0%
AAGTACATTGAGAGCGGTGG+TGG - tig0019933:68994-69013 Msa1377530:intron 50.0%
GTTTCGCAAACTTCACGTGC+TGG - tig0019933:69108-69127 Msa1377530:intron 50.0%
! TGCTGCCTATGTCTTTTGCC+TGG - tig0019933:69491-69510 Msa1377530:CDS 50.0%
CTTCGCCAGGCAAAAGACAT+AGG + tig0019933:69499-69518 None:intergenic 50.0%
GATGGAATAGCAACTTCGCC+AGG + tig0019933:69512-69531 None:intergenic 50.0%
GCACCATGCTAAGTGTCTCT+TGG - tig0019933:70225-70244 Msa1377530:intron 50.0%
GATGAGAGACTACTCCATCC+AGG + tig0019933:70283-70302 None:intergenic 50.0%
ATGATATGCTGCAGAACGGC+TGG - tig0019933:70371-70390 Msa1377530:intron 50.0%
TCCAAAGGTGGCACTAAACG+GGG - tig0019933:70494-70513 Msa1377530:intron 50.0%
TAAACGGGGGAAAGATGCAG+AGG - tig0019933:70508-70527 Msa1377530:intron 50.0%
AAACGGGGGAAAGATGCAGA+GGG - tig0019933:70509-70528 Msa1377530:intron 50.0%
GTCAAAGGCCGCTAAAGTCA+AGG - tig0019933:70541-70560 Msa1377530:intron 50.0%
AGCCCAGAGATCTTTGCTCT+GGG + tig0019933:70651-70670 None:intergenic 50.0%
! CAAAGATCTCTGGGCTCTGA+AGG - tig0019933:70655-70674 Msa1377530:intron 50.0%
AGCAGAGATGCGTGAAATGC+TGG - tig0019933:70703-70722 Msa1377530:intron 50.0%
CGTGAAATGCTGGATGCCAA+TGG - tig0019933:70713-70732 Msa1377530:intron 50.0%
!! AGCTTGATTTGCGTGACCGT+TGG - tig0019933:70756-70775 Msa1377530:intron 50.0%
CATGTCCATGGTTGTGGATG+AGG - tig0019933:71059-71078 Msa1377530:intron 50.0%
CGGAAATGTATCCAGTGCAC+CGG + tig0019933:71274-71293 None:intergenic 50.0%
GCACTGGATACATTTCCGAG+TGG - tig0019933:71276-71295 Msa1377530:intron 50.0%
TATTGCCTCCGCCATCATCA+AGG - tig0019933:71496-71515 Msa1377530:CDS 50.0%
TCAGCAGGAGTCCTTGATGA+TGG + tig0019933:71510-71529 None:intergenic 50.0%
ATCTTCAGGCAACCCAGAGA+TGG + tig0019933:71598-71617 None:intergenic 50.0%
TCTGCTCCACCGACCAATTT+AGG - tig0019933:71816-71835 Msa1377530:CDS 50.0%
! ACTAACTGCTTGGTGGTCAG+TGG - tig0019933:71910-71929 Msa1377530:intron 50.0%
GGATGAAGTTGAGATGCGGA+AGG - tig0019933:71942-71961 Msa1377530:intron 50.0%
AAGTTGAGATGCGGAAGGCA+AGG - tig0019933:71947-71966 Msa1377530:intron 50.0%
AGATGCGGAAGGCAAGGTAT+TGG - tig0019933:71953-71972 Msa1377530:intron 50.0%
GATTGGTGAGGCTTCTAGCA+TGG - tig0019933:72151-72170 Msa1377530:intron 50.0%
TCATGATGCTTCTGGCCTAC+AGG - tig0019933:72205-72224 Msa1377530:CDS 50.0%
GTATGTGGCCAGAATCCTGT+AGG + tig0019933:72223-72242 None:intergenic 50.0%
GGATTCTGGCCACATACTAG+AGG - tig0019933:72226-72245 Msa1377530:CDS 50.0%
TCTGGCCACATACTAGAGGA+AGG - tig0019933:72230-72249 Msa1377530:CDS 50.0%
CTGGCCACATACTAGAGGAA+GGG - tig0019933:72231-72250 Msa1377530:CDS 50.0%
! ATGGTGACTAATGGGAGCAC+TGG - tig0019933:72916-72935 Msa1377530:intron 50.0%
!! TGGTGACTAATGGGAGCACT+GGG - tig0019933:72917-72936 Msa1377530:intron 50.0%
TTTCGCAAATGGGGTCGAGT+GGG - tig0019933:73127-73146 Msa1377530:intron 50.0%
GATTGGAGGGAACAAACTGG+AGG - tig0019933:73159-73178 Msa1377530:intron 50.0%
GAAAACTGGAAACCCTTGGG+AGG - tig0019933:73231-73250 Msa1377530:intron 50.0%
GCAATGCTGATCCATCAGTC+AGG - tig0019933:73841-73860 Msa1377530:intron 50.0%
AGCAAGCTATCCCTGACTGA+TGG + tig0019933:73855-73874 None:intergenic 50.0%
TACTCATGCCCCCACACATA+CGG - tig0019933:74345-74364 Msa1377530:CDS 50.0%
GTAATCCGTCTACACAGGAC+TGG - tig0019933:74462-74481 Msa1377530:CDS 50.0%
AGACTCCAGTCCTGTGTAGA+CGG + tig0019933:74470-74489 None:intergenic 50.0%
GCCCCTTACAGAGACAAAGT+TGG - tig0019933:74542-74561 Msa1377530:intron 50.0%
GAGGTGCAATTCTCAGTCCT+TGG + tig0019933:75629-75648 None:intergenic 50.0%
ACTGAGCACTCTTGCTGACA+AGG + tig0019933:75870-75889 None:intergenic 50.0%
GTAGAATGCTTTCCTTGCGG+AGG + tig0019933:76176-76195 None:intergenic 50.0%
GATGATGTCGTTGTTCCCTG+TGG - tig0019933:76248-76267 Msa1377530:intron 50.0%
ACCCTCAAAACGCGAAGCCA+TGG - tig0019933:68410-68429 Msa1377530:three_prime_UTR 55.0%
ACGGAGCTTCTCGGTTGCAA+TGG + tig0019933:68488-68507 None:intergenic 55.0%
GGGCATGAGGCCATCGAATT+TGG + tig0019933:68533-68552 None:intergenic 55.0%
TCCAGCACTCGACTTAGAGG+CGG + tig0019933:69064-69083 None:intergenic 55.0%
!! CGTGCTGGTTGCAAGCATTG+CGG - tig0019933:69123-69142 Msa1377530:intron 55.0%
TCAATCGGCGGTCAGTGAGT+TGG - tig0019933:70309-70328 Msa1377530:intron 55.0%
CCAAAGGTGGCACTAAACGG+GGG - tig0019933:70495-70514 Msa1377530:intron 55.0%
AAATGCTGATGACTCCGGGG+CGG - tig0019933:70598-70617 Msa1377530:intron 55.0%
AGGCCCAGAGCAAAGATCTC+TGG - tig0019933:70645-70664 Msa1377530:intron 55.0%
GGCCCAGAGCAAAGATCTCT+GGG - tig0019933:70646-70665 Msa1377530:intron 55.0%
GAGCCCAGAGATCTTTGCTC+TGG + tig0019933:70652-70671 None:intergenic 55.0%
! CTTCGGTTCGCAGGTAGAGT+AGG + tig0019933:71312-71331 None:intergenic 55.0%
CACTTCCCTTCAGCACGCTT+CGG + tig0019933:71329-71348 None:intergenic 55.0%
GGCGGAGGCAATATCCTAGT+TGG + tig0019933:71489-71508 None:intergenic 55.0%
!! GCAGGAGTCCTTGATGATGG+CGG + tig0019933:71507-71526 None:intergenic 55.0%
GCTTCTGGCCTACAGGATTC+TGG - tig0019933:72212-72231 Msa1377530:CDS 55.0%
!! GGTGACTAATGGGAGCACTG+GGG - tig0019933:72918-72937 Msa1377530:intron 55.0%
!! GTGACTAATGGGAGCACTGG+GGG - tig0019933:72919-72938 Msa1377530:intron 55.0%
GTTTCGCAAATGGGGTCGAG+TGG - tig0019933:73126-73145 Msa1377530:intron 55.0%
TTTGTTCCCAGGCCTCCCAA+GGG + tig0019933:73246-73265 None:intergenic 55.0%
! TTTTGTTCCCAGGCCTCCCA+AGG + tig0019933:73247-73266 None:intergenic 55.0%
ACCTGGGAGATTCTTCCCCT+TGG - tig0019933:73282-73301 Msa1377530:intron 55.0%
TCCAAGGGGAAGAATCTCCC+AGG + tig0019933:73286-73305 None:intergenic 55.0%
GATGTCTGCTTCCTCATCCC+AGG - tig0019933:73777-73796 Msa1377530:intron 55.0%
!! TTGGACCGTGGTTTTGCCTG+TGG - tig0019933:74093-74112 Msa1377530:CDS 55.0%
AGCCCCAGCAACTGGCTATA+TGG - tig0019933:75653-75672 Msa1377530:intron 55.0%
ACTGGGCAAGAAAATGCCCC+TGG - tig0019933:76202-76221 Msa1377530:intron 55.0%
CGTTGTTCCCTGTGGGAAAC+CGG - tig0019933:76256-76275 Msa1377530:intron 55.0%
!! GATGACACCGGTTTCCCACA+GGG + tig0019933:76266-76285 None:intergenic 55.0%
!! TGATGACACCGGTTTCCCAC+AGG + tig0019933:76267-76286 None:intergenic 55.0%
GAGAGGGTGAGGAGAGAGAG+TGG - tig0019933:68335-68354 Msa1377530:three_prime_UTR 60.0%
GCAACCGAGAAGCTCCGTCT+TGG - tig0019933:68490-68509 Msa1377530:three_prime_UTR 60.0%
! GAGAGCGGTGGTGGTAGTAG+TGG - tig0019933:69003-69022 Msa1377530:intron 60.0%
GGCACACCGAAGTCGAATGC+TGG - tig0019933:69024-69043 Msa1377530:intron 60.0%
! AGCCTGATGGTCAAGGTGCC+AGG - tig0019933:70191-70210 Msa1377530:intron 60.0%
! GCCTGATGGTCAAGGTGCCA+GGG - tig0019933:70192-70211 Msa1377530:intron 60.0%
! CCTGATGGTCAAGGTGCCAG+GGG - tig0019933:70193-70212 Msa1377530:intron 60.0%
! TGGTCAAGGTGCCAGGGGTT+TGG - tig0019933:70198-70217 Msa1377530:intron 60.0%
! AAGGTGCCAGGGGTTTGGCT+TGG - tig0019933:70203-70222 Msa1377530:intron 60.0%
! ATGGTGCCAAGCCAAACCCC+TGG + tig0019933:70212-70231 None:intergenic 60.0%
CCCCCGTTTAGTGCCACCTT+TGG + tig0019933:70498-70517 None:intergenic 60.0%
AGGGAGATGTGTCTGCGAGC+AGG - tig0019933:70561-70580 Msa1377530:intron 60.0%
GGGAGATGTGTCTGCGAGCA+GGG - tig0019933:70562-70581 Msa1377530:intron 60.0%
TGTGTCTGCGAGCAGGGTAG+CGG - tig0019933:70568-70587 Msa1377530:intron 60.0%
! GGAGGAATGTACCGGTGCAC+TGG - tig0019933:71260-71279 Msa1377530:intron 60.0%
! TTCAGCACGCTTCGGTTCGC+AGG + tig0019933:71321-71340 None:intergenic 60.0%
TGCGAACCGAAGCGTGCTGA+AGG - tig0019933:71320-71339 Msa1377530:intron 60.0%
GCGAACCGAAGCGTGCTGAA+GGG - tig0019933:71321-71340 Msa1377530:intron 60.0%
CGAAGCGTGCTGAAGGGAAG+TGG - tig0019933:71327-71346 Msa1377530:intron 60.0%
!! GGAGTCCTTGATGATGGCGG+AGG + tig0019933:71504-71523 None:intergenic 60.0%
! GGTGGTCAGTGGAGCGCTTA+AGG - tig0019933:71921-71940 Msa1377530:intron 60.0%
!! TAATGGGAGCACTGGGGGTC+TGG - tig0019933:72924-72943 Msa1377530:intron 60.0%
!! AATGGGAGCACTGGGGGTCT+GGG - tig0019933:72925-72944 Msa1377530:intron 60.0%
TGGAAACCCTTGGGAGGCCT+GGG - tig0019933:73237-73256 Msa1377530:intron 60.0%
TAGCCAGTTGCTGGGGCTTC+AGG + tig0019933:75651-75670 None:intergenic 60.0%
GCCGCCTCTAAGTCGAGTGC+TGG - tig0019933:69060-69079 Msa1377530:intron 65.0%
CCCCTGGCACCTTGACCATC+AGG + tig0019933:70196-70215 None:intergenic 65.0%
CTCAAGATCACGTGCCGCCC+CGG + tig0019933:70615-70634 None:intergenic 65.0%
!! ATGGGAGCACTGGGGGTCTG+GGG - tig0019933:72926-72945 Msa1377530:intron 65.0%
! ACTGGGGGTCTGGGGCTGTT+GGG - tig0019933:72934-72953 Msa1377530:intron 65.0%
CTGGAAACCCTTGGGAGGCC+TGG - tig0019933:73236-73255 Msa1377530:intron 65.0%
CCAGTTGCTGGGGCTTCAGG+AGG + tig0019933:75648-75667 None:intergenic 65.0%
CCTCCTGAAGCCCCAGCAAC+TGG - tig0019933:75645-75664 Msa1377530:intron 65.0%
! CACTGGGGGTCTGGGGCTGT+TGG - tig0019933:72933-72952 Msa1377530:intron 70.0%
Chromosome Type Strat End Strand Name
tig0019933 gene 68280 77415 68280 ID=Msa1377530;Name=Msa1377530
tig0019933 mRNA 68280 77415 68280 ID=Msa1377530-mRNA-1;Parent=Msa1377530;Name=Msa1377530-mRNA-1;_AED=0.07;_eAED=0.07;_QI=123|1|1|1|1|1|20|444|1011
tig0019933 exon 68280 68771 68280 ID=Msa1377530-mRNA-1:exon:5693;Parent=Msa1377530-mRNA-1
tig0019933 exon 69352 69534 69352 ID=Msa1377530-mRNA-1:exon:5692;Parent=Msa1377530-mRNA-1
tig0019933 exon 69717 69854 69717 ID=Msa1377530-mRNA-1:exon:5691;Parent=Msa1377530-mRNA-1
tig0019933 exon 70021 70103 70021 ID=Msa1377530-mRNA-1:exon:5690;Parent=Msa1377530-mRNA-1
tig0019933 exon 71108 71216 71108 ID=Msa1377530-mRNA-1:exon:5689;Parent=Msa1377530-mRNA-1
tig0019933 exon 71329 71520 71329 ID=Msa1377530-mRNA-1:exon:5688;Parent=Msa1377530-mRNA-1
tig0019933 exon 71736 71896 71736 ID=Msa1377530-mRNA-1:exon:5687;Parent=Msa1377530-mRNA-1
tig0019933 exon 72022 72098 72022 ID=Msa1377530-mRNA-1:exon:5686;Parent=Msa1377530-mRNA-1
tig0019933 exon 72168 72280 72168 ID=Msa1377530-mRNA-1:exon:5685;Parent=Msa1377530-mRNA-1
tig0019933 exon 72386 72620 72386 ID=Msa1377530-mRNA-1:exon:5684;Parent=Msa1377530-mRNA-1
tig0019933 exon 73386 73637 73386 ID=Msa1377530-mRNA-1:exon:5683;Parent=Msa1377530-mRNA-1
tig0019933 exon 73727 73787 73727 ID=Msa1377530-mRNA-1:exon:5682;Parent=Msa1377530-mRNA-1
tig0019933 exon 73883 73943 73883 ID=Msa1377530-mRNA-1:exon:5681;Parent=Msa1377530-mRNA-1
tig0019933 exon 74072 74236 74072 ID=Msa1377530-mRNA-1:exon:5680;Parent=Msa1377530-mRNA-1
tig0019933 exon 74307 74502 74307 ID=Msa1377530-mRNA-1:exon:5679;Parent=Msa1377530-mRNA-1
tig0019933 exon 74918 75260 74918 ID=Msa1377530-mRNA-1:exon:5678;Parent=Msa1377530-mRNA-1
tig0019933 exon 75334 75520 75334 ID=Msa1377530-mRNA-1:exon:5677;Parent=Msa1377530-mRNA-1
tig0019933 exon 76528 76759 76528 ID=Msa1377530-mRNA-1:exon:5676;Parent=Msa1377530-mRNA-1
tig0019933 exon 76852 76901 76852 ID=Msa1377530-mRNA-1:exon:5675;Parent=Msa1377530-mRNA-1
tig0019933 exon 77143 77415 77143 ID=Msa1377530-mRNA-1:exon:5674;Parent=Msa1377530-mRNA-1
tig0019933 five_prime_UTR 77293 77415 77293 ID=Msa1377530-mRNA-1:five_prime_utr;Parent=Msa1377530-mRNA-1
tig0019933 CDS 77143 77292 77143 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 76852 76901 76852 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 76528 76759 76528 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 75334 75520 75334 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 74918 75260 74918 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 74307 74502 74307 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 74072 74236 74072 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 73883 73943 73883 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 73727 73787 73727 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 73386 73637 73386 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 72386 72620 72386 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 72168 72280 72168 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 72022 72098 72022 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 71736 71896 71736 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 71329 71520 71329 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 71108 71216 71108 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 70021 70103 70021 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 69717 69854 69717 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 69352 69534 69352 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 CDS 68724 68771 68724 ID=Msa1377530-mRNA-1:cds;Parent=Msa1377530-mRNA-1
tig0019933 three_prime_UTR 68280 68723 68280 ID=Msa1377530-mRNA-1:three_prime_utr;Parent=Msa1377530-mRNA-1
Gene Sequence

>Msa1377530

ATGTCGAACCCTCAAAACGCGAAGCCATGGAAAGCAGAGTACGCAAAATCAGGTCGTTCGTCATGCAGAACCTGCAAGAGTACCATTGCAACCGAGAAGCTCCGTCTTGGAAAAATGGTTCAATCCTCCAAATTCGATGGCCTCATGCCCATGTGGAACCATGCTGAGTGCATATTGAAGAAAGCCAACCAGATAAAATTAGTTGACGATGTTGAGAACTTAGAGTCGCTTCGTTGGGAAGATCAGCAGAAGATTAGAAAGTACATTGAGAGCGGTGGTGGTAGTAGTGGCACACCGAAGTCGAATGCTGGTTCAAAGTCGAATGCCGCCTCTAAGTCGAGTGCTGGAAAAAATGTTGAATATGGTATTGAAGTTTCGCAAACTTCACGTGCTGGTTGCAAGCATTGCGGTCAAAAAATTATCAAAGGAGAGATTCGCATATCTACTAAGCCTGATGGTCAAGGTGCCAGGGGTTTGGCTTGGCACCATGCTAAGTGTCTCTTGGAACTATCTCCATCAATTGAAGTGGATAATTTGCCTGGATGGAGTAGTCTCTCATCTTCTGATCAATCGGCGGTCAGTGAGTTGGCTACAAAAGACCATCCTACAAAAAGAGGAGGTGGTAGTGGTACAAATGTCGAGGCTGAAGATGTTAAAGAATCCACACAACAATCCTCTTCCAAAGGTGGCACTAAACGGGGGAAAGATGCAGAGGGTGAGCAAAAGTCAAAGGCCGCTAAAGTCAAGGGAGATGTGTCTGCGAGCAGGGTAGCGGCAGTGAAAAATGCTGATGACTCCGGGGCGGCACGTGATCTTGAGAATAGACTGGAGGCCCAGAGCAAAGATCTCTGGGCTCTGAAGGATGATCTTAAAAAGCATGTGACAACAGCAGAGATGCGTGAAATGCTGGATGCCAATGGTCAAGATTCAACAGGATCAGAGCTTGATTTGCGTGACCGTTGTGCTGATGGAATGATGTTTGGAGGACTTAGTCCTTGCTCTCTATGTGATGGTTTTCTGCGTTATTCTGGAGGAATGTACCGGTGCACTGGATACATTTCCGAGTGGAGTAAATGTTCCTACTCTACCTGCGAACCGAAGCGTGCTGAAGGGAAGTGGAAAATCCCAAAGGAAACAGATAATCAGTACCTTAAAAAGTGGTTCAAATCTCAAAAAGGGAAGAAACCAACTAGGATATTGCCTCCGCCATCATCAAGGACTCCTGCTGAAAGTCAAACTTCTGTAGGTCATAACCAAACATCAAACAGTGAAACTTTGGCTGATTTGAGAGTTGCCATCTCTGGGTTGCCTGAAGATTCCGTTGTGGAATGGAAACGCAAAATTGATGCAGTAGGTGGAGTGCTTCATGCAAAAGTGAAGAAAGATACTAACTGCTTGGTGGTCAGTGGAGCGCTTAAGGATGAAGTTGAGATGCGGAAGGCAAGGAAGATGAAAATACCAATAGTCAGAGAGGACTATTTGGTTGACTGTATGGAAAGAAAGAAGAAGCTTCCATTTGATATGTACAAAGTTGAAATGATTGGTGAGGCTTCTAGCATGGTCACCATCAAAGTCAAGGGGCAAAGTGCTGTTCATGATGCTTCTGGCCTACAGGATTCTGGCCACATACTAGAGGAAGGGAAAAGCATATATAATACAACTTTGAATATGTCTGATTTGTCTACTGGTATTAACAGCTACTACATCCTGCAAATAATTGAAGAAGATAATGGGTCAGATTGCTACGTGTTTCGCAAATGGGGTCGAGTGGGAAATGACAAGATTGGAGGGAACAAACTGGAGGAAATGTCGAAATCTGATGCAATCAGGGAATTCAAACGACTATTCTTTGAGAAAACTGGAAACCCTTGGGAGGCCTGGGAACAAAAGACTATTCAGAAGCAACCTGGGAGATTCTTCCCCTTGGAAATTGATTATGGAGTTAACAAACAAGTTGTGAAAAAGAGTAAAAACAATGCAGACAGCAAATTACCCCCTCCATTAATAGAATTGATCAAGATGCTCTTTAATGTGGAAACATACAGATCCGCCATGATGGAATTTGAGATCAATATGTCCGAAATGCCACTTGGGAAACTGAGCAAAAGTAATATCCAAAAGGGTTTTGAAGCATTAACAGATATACAAAATCTTTTTAAAAGCAGCAATGCTGATCCATCAGTCAGGGATAGCTTGCTCATTGATGCTAGCAATAGGTTCTTCACTGTGATCCCTTCCATTCATCCACATATTATTAGGGATGAGGATGATTTTAAGTCAAAGGTGAAAATGTTGGAAGCCCTTCAAGATATTGAAATAGCCTCAAGATTAGTGGGATTTGACGCCAACAACGACGACTCCATTGATGATAATTATAAGAAGCTCCACTGTGATATATCTCCACTTCCTCATGACAGTGAAGATTTTAGATTAGTTGAGAAGTTTCTACATACTACTCATGCCCCCACACATACGGACTGGAGTCTTGAGCTAGAAGAAGTTTTTTCACTTGAAAGAGAAGGTGAATTTGATAAATATGCCCCTTACAGAGACAAAGTTGGCAACAGAATGCTCCTATGGCATGGTTCTAGGTTGACGAACTTTGTGGGCATTCTTAACCAAGGACTGAGAATTGCACCTCCTGAAGCCCCAGCAACTGGCTATATGTTTGGCAAAGGGATTTACTTTGCTGACCTTGTCAGCAAGAGTGCTCAGTATTGCTTCACTGATAAGAAAAATCCTGTTGGTCTAATGCTTTTAAGTGAAGTTGCCCTTGGAAATGTGTATGAGCTCAAAAAAGCTAAGTATATGGATAAACCTCCGCAAGGAAAGCATTCTACTAAAGGACTGGGCAAGAAAATGCCCCTGGAATCTGAATATGCAAAGTGGAGAGATGATGTCGTTGTTCCCTGTGGGAAACCGGTGTCATCAAATGTCAAGGCATCTGAGCTCATGTACAATGAGTATATTGTTTATAATACCGCTCAAGTTAAACTGCAATTCTTGTTGAAGGTGAGGTTCCATCACAAGAAATGA
Protein sequence

>Msa1377530

MSNPQNAKPWKAEYAKSGRSSCRTCKSTIATEKLRLGKMVQSSKFDGLMPMWNHAECILKKANQIKLVDDVENLESLRWEDQQKIRKYIESGGGSSGTPKSNAGSKSNAASKSSAGKNVEYGIEVSQTSRAGCKHCGQKIIKGEIRISTKPDGQGARGLAWHHAKCLLELSPSIEVDNLPGWSSLSSSDQSAVSELATKDHPTKRGGGSGTNVEAEDVKESTQQSSSKGGTKRGKDAEGEQKSKAAKVKGDVSASRVAAVKNADDSGAARDLENRLEAQSKDLWALKDDLKKHVTTAEMREMLDANGQDSTGSELDLRDRCADGMMFGGLSPCSLCDGFLRYSGGMYRCTGYISEWSKCSYSTCEPKRAEGKWKIPKETDNQYLKKWFKSQKGKKPTRILPPPSSRTPAESQTSVGHNQTSNSETLADLRVAISGLPEDSVVEWKRKIDAVGGVLHAKVKKDTNCLVVSGALKDEVEMRKARKMKIPIVREDYLVDCMERKKKLPFDMYKVEMIGEASSMVTIKVKGQSAVHDASGLQDSGHILEEGKSIYNTTLNMSDLSTGINSYYILQIIEEDNGSDCYVFRKWGRVGNDKIGGNKLEEMSKSDAIREFKRLFFEKTGNPWEAWEQKTIQKQPGRFFPLEIDYGVNKQVVKKSKNNADSKLPPPLIELIKMLFNVETYRSAMMEFEINMSEMPLGKLSKSNIQKGFEALTDIQNLFKSSNADPSVRDSLLIDASNRFFTVIPSIHPHIIRDEDDFKSKVKMLEALQDIEIASRLVGFDANNDDSIDDNYKKLHCDISPLPHDSEDFRLVEKFLHTTHAPTHTDWSLELEEVFSLEREGEFDKYAPYRDKVGNRMLLWHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVALGNVYELKKAKYMDKPPQGKHSTKGLGKKMPLESEYAKWRDDVVVPCGKPVSSNVKASELMYNEYIVYNTAQVKLQFLLKVRFHHKK*