AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0795050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0795050 MtrunA17_Chr5g0396691 95.547 539 18 1 9 547 130 662 0.0 1042
Msa0795050 MtrunA17_Chr5g0396711 94.805 539 22 1 9 547 130 662 0.0 1035
Msa0795050 MtrunA17_Chr8g0388081 74.393 535 131 1 8 542 68 596 0.0 860
Msa0795050 MtrunA17_Chr4g0034181 59.811 530 205 2 13 542 133 654 0.0 666
Msa0795050 MtrunA17_Chr1g0162621 57.008 528 220 1 13 540 134 654 0.0 644
Msa0795050 MtrunA17_Chr1g0194371 50.369 542 260 3 8 546 127 662 0.0 542
Msa0795050 MtrunA17_Chr7g0270221 52.621 477 220 1 56 532 136 606 1.79e-172 502
Msa0795050 MtrunA17_Chr1g0205711 40.672 536 297 10 13 544 171 689 2.64e-127 388
Msa0795050 MtrunA17_Chr3g0120731 36.695 466 268 9 94 539 268 726 2.78e-81 268
Msa0795050 MtrunA17_Chr1g0160041 33.569 566 336 14 2 541 145 696 6.00e-78 259
Msa0795050 MtrunA17_Chr3g0124631 33.028 545 324 17 22 539 166 696 6.16e-77 256
Msa0795050 MtrunA17_Chr3g0121931 27.448 572 336 21 24 540 173 720 2.59e-38 149
Msa0795050 MtrunA17_Chr8g0377991 26.466 597 361 18 6 540 144 724 1.88e-37 147
Msa0795050 MtrunA17_Chr3g0121951 26.654 514 308 19 76 540 222 715 2.58e-34 137
Msa0795050 MtrunA17_Chr5g0395431 30.081 369 181 15 85 434 204 514 3.11e-23 103
Msa0795050 MtrunA17_Chr1g0180541 26.000 400 216 17 72 450 158 498 8.60e-23 102
Msa0795050 MtrunA17_Chr1g0180551 25.408 429 242 16 98 516 254 614 6.68e-22 99.8
Msa0795050 MtrunA17_Chr4g0028411 26.979 341 181 12 105 434 186 469 1.42e-21 98.2
Msa0795050 MtrunA17_Chr4g0039791 27.907 387 217 13 58 429 144 483 2.01e-21 97.8
Msa0795050 MtrunA17_Chr5g0409791 26.448 397 220 12 58 429 141 490 2.84e-21 97.4
Msa0795050 MtrunA17_Chr2g0327341 26.761 426 222 17 105 516 183 532 2.55e-19 91.3
Msa0795050 MtrunA17_Chr3g0116251 24.056 503 299 20 23 516 121 549 4.26e-18 87.8
Msa0795050 MtrunA17_Chr3g0116271 24.506 506 296 20 23 516 120 551 5.21e-18 87.4
Msa0795050 MtrunA17_Chr8g0370731 27.794 349 158 14 108 429 137 418 9.95e-17 83.2
Msa0795050 MtrunA17_Chr4g0000461 28.107 338 186 14 105 434 180 468 5.53e-16 80.9
Msa0795050 MtrunA17_Chr6g0471921 25.272 368 200 12 48 407 116 416 6.37e-16 80.5
Msa0795050 MtrunA17_Chr1g0197391 26.506 332 188 13 101 427 206 486 1.19e-15 80.1
Msa0795050 MtrunA17_Chr3g0102411 26.269 335 192 12 106 434 183 468 1.67e-15 79.3
Msa0795050 MtrunA17_Chr1g0157401 23.030 330 198 10 106 429 203 482 1.64e-14 76.3
Msa0795050 MtrunA17_Chr5g0396331 25.138 362 192 14 99 440 170 472 2.80e-14 75.5
Msa0795050 MtrunA17_Chr3g0109731 24.870 386 199 15 85 449 165 480 3.26e-14 75.5
Msa0795050 MtrunA17_Chr4g0072561 27.485 342 178 17 107 434 190 475 1.40e-13 73.6
Msa0795050 MtrunA17_Chr1g0186071 31.325 166 109 5 271 434 321 483 2.12e-13 72.8
Msa0795050 MtrunA17_Chr5g0406681 25.284 352 187 13 101 436 206 497 2.33e-13 72.8
Msa0795050 MtrunA17_Chr8g0353341 24.471 331 194 11 105 429 205 485 4.39e-13 71.6
Msa0795050 MtrunA17_Chr8g0370701 25.648 347 168 14 108 429 226 507 1.78e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0795050 AT4G11030.1 73.596 534 135 1 8 541 130 657 0.0 830
Msa0795050 AT4G23850.1 73.321 536 137 1 8 543 130 659 0.0 828
Msa0795050 AT1G64400.1 71.482 533 146 1 8 540 130 656 0.0 805
Msa0795050 AT1G49430.1 54.749 537 235 3 13 547 135 665 0.0 627
Msa0795050 AT2G47240.4 46.904 533 277 1 8 540 68 594 5.74e-178 515
Msa0795050 AT2G47240.1 46.904 533 277 1 8 540 127 653 6.92e-177 514
Msa0795050 AT2G47240.2 46.904 533 277 1 8 540 127 653 6.92e-177 514
Msa0795050 AT2G47240.3 46.904 533 277 1 8 540 127 653 6.92e-177 514
Msa0795050 AT1G49430.2 51.337 374 175 2 13 385 135 502 6.99e-141 417
Msa0795050 AT5G27600.1 40.189 530 298 9 13 539 174 687 5.31e-128 390
Msa0795050 AT3G05970.1 40.977 532 293 9 13 540 174 688 2.88e-124 380
Msa0795050 AT2G04350.2 32.586 580 322 13 2 539 167 719 2.70e-84 277
Msa0795050 AT2G04350.1 32.586 580 322 13 2 539 167 719 2.70e-84 277
Msa0795050 AT1G77590.2 34.070 543 314 14 22 539 21 544 1.22e-83 270
Msa0795050 AT1G77590.1 34.070 543 314 14 22 539 167 690 3.33e-82 270
Msa0795050 AT3G23790.1 26.598 579 330 23 24 540 177 722 4.24e-38 149
Msa0795050 AT4G14070.1 27.500 520 293 21 72 539 239 726 7.03e-35 140
Msa0795050 AT4G19010.1 27.604 384 217 12 58 427 146 482 1.52e-21 99.0
Msa0795050 AT3G21230.3 28.313 332 186 12 108 434 211 495 5.06e-19 90.9
Msa0795050 AT3G21230.1 28.313 332 186 12 108 434 211 495 5.57e-19 90.9
Msa0795050 AT3G21230.2 28.313 332 186 12 108 434 211 495 7.12e-19 90.1
Msa0795050 AT4G05160.1 27.108 332 182 13 105 429 188 466 4.05e-18 88.2
Msa0795050 AT3G16170.1 25.436 401 230 12 95 477 222 571 9.20e-18 87.0
Msa0795050 AT3G21240.1 27.907 344 177 14 108 436 196 483 9.56e-18 87.0
Msa0795050 AT3G21240.2 27.907 344 177 14 108 436 196 483 1.35e-17 86.3
Msa0795050 AT3G21240.3 27.907 344 177 14 108 436 196 483 1.35e-17 86.3
Msa0795050 AT1G20500.1 26.727 333 179 13 106 429 196 472 7.80e-17 84.0
Msa0795050 AT3G16910.1 25.116 430 219 16 114 508 204 565 9.98e-16 80.5
Msa0795050 AT5G63380.1 25.000 452 256 18 74 515 172 550 1.54e-15 80.1
Msa0795050 AT1G65060.1 26.426 333 168 12 108 422 206 479 1.91e-15 79.7
Msa0795050 AT1G65060.2 26.415 318 158 11 108 407 206 465 3.86e-15 78.6
Msa0795050 AT1G51680.3 28.125 352 176 14 108 441 203 495 5.33e-15 78.2
Msa0795050 AT1G51680.1 28.125 352 176 14 108 441 203 495 5.65e-15 78.2
Msa0795050 AT1G66120.1 25.549 364 188 14 103 449 182 479 5.98e-15 78.2
Msa0795050 AT1G65890.1 24.798 371 184 11 103 450 182 480 9.06e-15 77.8
Msa0795050 AT1G51680.2 27.954 347 173 14 108 436 203 490 1.83e-14 76.3
Msa0795050 AT1G20510.1 26.023 342 191 13 103 434 182 471 5.10e-14 75.1
Msa0795050 AT1G20510.2 25.439 342 193 12 103 434 182 471 1.02e-13 73.9
Msa0795050 AT1G20510.3 26.032 315 172 12 103 407 182 445 4.76e-13 72.0
Msa0795050 AT1G62940.1 25.223 337 195 11 106 434 180 467 5.27e-12 68.9

Find 156 sgRNAs with CRISPR-Local

Find 885 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTCTCAGATATGGGTTTA+TGG 0.169098 5_3:-6935934 Msa0795050:intron
ACACTTACTCTTGAGATATT+TGG 0.177764 5_3:+6939504 None:intergenic
AGAGGAGAAATTTGTTTAAA+AGG 0.210304 5_3:-6936937 Msa0795050:CDS
ATTCTCTCTGTGGAGATTCT+AGG 0.235210 5_3:-6935816 Msa0795050:CDS
TTTGCTCATTTATTTCCTTT+TGG 0.236484 5_3:-6934579 Msa0795050:three_prime_UTR
TGACCCAGTTCCATTTGATA+TGG 0.272583 5_3:-6935266 Msa0795050:CDS
TTGAGATATTTGGTTGCATT+TGG 0.288948 5_3:+6939514 None:intergenic
TTCATATATTGCTGGTTTGC+AGG 0.289067 5_3:-6949248 None:intergenic
TATTAGGTGAAGCAAGGTTT+AGG 0.289486 5_3:-6937548 Msa0795050:intron
ATGTTCAAGTGCTGGTTTGC+TGG 0.291698 5_3:+6935873 None:intergenic
GTTCAATAGGCTTCTGGCGC+GGG 0.302933 5_3:-6938387 Msa0795050:CDS
TTGACACAGAAAATTTCTTC+TGG 0.306587 5_3:-6937969 Msa0795050:CDS
AGGGCATCGTAACCCATTTC+AGG 0.320553 5_3:+6936973 None:intergenic
CTCCTCTTGGTGTGCTTGCA+AGG 0.324542 5_3:+6936953 None:intergenic
ATAAAATATTATTCCATTCC+TGG 0.326653 5_3:-6934420 Msa0795050:three_prime_UTR
CATAATCCACTCTGCAGAAT+TGG 0.331511 5_3:+6949201 None:intergenic
CCAAGCATATCTAGTTCATT+TGG 0.343611 5_3:+6937045 None:intergenic
ATATGGCATGGTGGTTCAAT+AGG 0.345107 5_3:-6938400 Msa0795050:CDS
ATAATCTTCATACTTCCATT+AGG 0.361330 5_3:+6936706 None:intergenic
ATTAGGTGAAGCAAGGTTTA+GGG 0.362139 5_3:-6937547 Msa0795050:intron
GAACATTGGGCAGAAGAAAA+TGG 0.369465 5_3:-6935856 Msa0795050:CDS
ATGGCATATAATAAATTCTA+TGG 0.369565 5_3:+6939714 None:intergenic
GCATGTGGAAAGTTACTTAC+GGG 0.372264 5_3:-6937480 Msa0795050:CDS
TTTAAACAAATTTCTCCTCT+TGG 0.377874 5_3:+6936940 None:intergenic
CCTGGAATCTGTTCCTGAAA+TGG 0.379308 5_3:-6936986 Msa0795050:CDS
ACAAAAGAGGTTCTGGTTGA+TGG 0.379543 5_3:-6936874 Msa0795050:CDS
GCTCATGTCCTACAAGGATA+TGG 0.379833 5_3:-6937446 Msa0795050:intron
CTCTCGCACATACCTTTGAT+AGG 0.389512 5_3:-6938441 Msa0795050:CDS
TTGGATATCAATACTCCCTT+GGG 0.390960 5_3:+6938786 None:intergenic
AGTTGAATAATGTCTTCTTC+AGG 0.393797 5_3:+6937940 None:intergenic
GGTGTAAAATGTGGTATTTA+TGG 0.394524 5_3:-6949226 Msa0795050:exon
CCATTTCAGGAACAGATTCC+AGG 0.395196 5_3:+6936986 None:intergenic
TTGGATTGGCAATATATTCA+TGG 0.401527 5_3:-6939357 Msa0795050:CDS
AGACCTCACAAAAGAGGTTC+TGG 0.403618 5_3:-6936881 Msa0795050:CDS
TCTGCCCAATGTTCAAGTGC+TGG 0.409379 5_3:+6935865 None:intergenic
TGTTCAAGTGCTGGTTTGCT+GGG 0.410438 5_3:+6935874 None:intergenic
AGCTGGGGTGAAGCGGCTAT+TGG 0.411629 5_3:-6938742 Msa0795050:CDS
AGTTGTTAATTGAAGATCTC+GGG 0.414008 5_3:-6938215 Msa0795050:CDS
CTTGACGAGCTCTCAAAGAT+TGG 0.417041 5_3:-6935778 Msa0795050:CDS
TCAGTTGCTCAAATACTATC+AGG 0.419597 5_3:-6935203 Msa0795050:intron
TATACAGCAATTGTGAGCTT+CGG 0.424153 5_3:-6939418 Msa0795050:intron
TCCTCTTGGTGTGCTTGCAA+GGG 0.426219 5_3:+6936954 None:intergenic
TGACAAAATTGTGTTCGATA+AGG 0.427629 5_3:-6937659 Msa0795050:intron
CGTTCCATATCAAATGGAAC+TGG 0.429994 5_3:+6935262 None:intergenic
GAGGGTAATAATACTCTCAT+TGG 0.431912 5_3:+6938767 None:intergenic
TCCAGGCACGCATCCACATT+TGG 0.432219 5_3:+6937003 None:intergenic
AGTATTATTACCCTCTTAGC+TGG 0.433434 5_3:-6938759 Msa0795050:CDS
GCAAACCAGCACTTGAACAT+TGG 0.440808 5_3:-6935870 Msa0795050:CDS
ATTGGAGAGTGGCAACCTAA+TGG 0.442586 5_3:-6936721 Msa0795050:CDS
TCATTGAGGAGACATTTATA+TGG 0.450467 5_3:-6938417 Msa0795050:CDS
AAGCAAGAAGTTGAAAAGCT+TGG 0.451391 5_3:-6939376 Msa0795050:CDS
GAAAACACCAATAACCTGTA+TGG 0.451975 5_3:+6936845 None:intergenic
ATGGTGGTTCAATAGGCTTC+TGG 0.452304 5_3:-6938393 Msa0795050:CDS
CTGGAATCTGTTCCTGAAAT+GGG 0.452978 5_3:-6936985 Msa0795050:CDS
TAAAATATTATTCCATTCCT+GGG 0.458500 5_3:-6934419 Msa0795050:three_prime_UTR
TCTTGTATGTCGGAGTGATA+AGG 0.462915 5_3:+6935236 None:intergenic
ATTGGATATCAATACTCCCT+TGG 0.463258 5_3:+6938785 None:intergenic
ACCAAATGTGGATGCGTGCC+TGG 0.469468 5_3:-6937004 Msa0795050:CDS
CAAACCAGCACTTGAACATT+GGG 0.469596 5_3:-6935869 Msa0795050:CDS
TGCATGTGGAAAGTTACTTA+CGG 0.469805 5_3:-6937481 Msa0795050:CDS
CAGATTCAACAGAAGGAACT+TGG 0.470972 5_3:+6936608 None:intergenic
AGGTCACGTTCCATATCAAA+TGG 0.471049 5_3:+6935256 None:intergenic
CAAATGCATTTCTCAGGCAC+GGG 0.472110 5_3:+6934662 None:intergenic
TCATATATTGCTGGTTTGCA+GGG 0.474716 5_3:-6949247 None:intergenic
CTTGGCTATAAATATTCTCC+AGG 0.484171 5_3:+6936626 None:intergenic
CCGTGCCTGAGAAATGCATT+TGG 0.484174 5_3:-6934661 Msa0795050:exon
ACATATATGACTTAGGTTCT+GGG 0.485223 5_3:-6939738 Msa0795050:intron
GCCGCTTCACCCCAGCTAAG+AGG 0.487102 5_3:+6938748 None:intergenic
GTATTATTACCCTCTTAGCT+GGG 0.491738 5_3:-6938758 Msa0795050:CDS
GTTGATGGATGGTTCCATAC+AGG 0.491965 5_3:-6936859 Msa0795050:intron
GGTTCAATAGGCTTCTGGCG+CGG 0.492279 5_3:-6938388 Msa0795050:CDS
AGAGCATACCATATCCTTGT+AGG 0.496672 5_3:+6937438 None:intergenic
TGATAAGTACACATCCTTCT+CGG 0.497391 5_3:+6938471 None:intergenic
AAGTTGTTAATTGAAGATCT+CGG 0.497471 5_3:-6938216 Msa0795050:CDS
ATGTATACTAGCGGAACTAC+TGG 0.501317 5_3:-6938813 Msa0795050:CDS
TTCTCTCTGTGGAGATTCTA+GGG 0.505172 5_3:-6935815 Msa0795050:CDS
AGAAGTTGAAAAGCTTGGAT+TGG 0.510392 5_3:-6939371 Msa0795050:CDS
CAAATGGAACTGGGTCAAGA+TGG 0.514025 5_3:+6935272 None:intergenic
AGCCTCTTCTTCTTGTATGT+CGG 0.522502 5_3:+6935226 None:intergenic
CCAAATGAACTAGATATGCT+TGG 0.522719 5_3:-6937045 Msa0795050:CDS
ATTTATTCAACAGGGGACAT+TGG 0.526253 5_3:-6936739 Msa0795050:intron
CCCTCTTAGCTGGGGTGAAG+CGG 0.526428 5_3:-6938749 Msa0795050:CDS
CAAAGGTATGTGCGAGAGGA+AGG 0.528894 5_3:+6938446 None:intergenic
AAAGATTGGAAAGGAAAAGA+AGG 0.529034 5_3:-6935764 Msa0795050:intron
CAACTCCAAATGCATTTCTC+AGG 0.529887 5_3:+6934656 None:intergenic
TACCTTTGATAGGGTCATTG+AGG 0.533634 5_3:-6938431 Msa0795050:CDS
CCGCTTCACCCCAGCTAAGA+GGG 0.536761 5_3:+6938749 None:intergenic
ATGTACAGACAGTAACCAAA+AGG 0.537206 5_3:+6934564 None:intergenic
ACGTGAAGACCTCACAAAAG+AGG 0.543040 5_3:-6936887 Msa0795050:CDS
CCAAATGCATTTCTCAGGCA+CGG 0.545670 5_3:+6934661 None:intergenic
TTCATTTGGTAATGAGACAA+AGG 0.547604 5_3:+6937059 None:intergenic
CTTTCCACATGCAAAGATAG+AGG 0.551047 5_3:+6937491 None:intergenic
CTGAGAAATGCATTTGGAGT+TGG 0.553113 5_3:-6934655 Msa0795050:exon
AAGTTGAATAACATGAAGAA+AGG 0.555049 5_3:-6937712 Msa0795050:CDS
ATATGTTGCTGTTGAAAACC+TGG 0.555433 5_3:-6936644 Msa0795050:CDS
TGCAGAGTGGATTATGAGCA+TGG 0.556427 5_3:-6949194 Msa0795050:CDS
TCTCGCACATACCTTTGATA+GGG 0.557834 5_3:-6938440 Msa0795050:CDS
CTCCGACATACAAGAAGAAG+AGG 0.558276 5_3:-6935228 Msa0795050:CDS
AAGAGGTTCTGGTTGATGGA+TGG 0.558942 5_3:-6936870 Msa0795050:CDS
CTAGATATGCTTGGAACAGT+GGG 0.559533 5_3:-6937036 Msa0795050:CDS
ACACAGAAAATTTCTTCTGG+AGG 0.567816 5_3:-6937966 Msa0795050:CDS
TAGGTGAAGCAAGGTTTAGG+GGG 0.568060 5_3:-6937545 Msa0795050:CDS
TACATATGATTATGAAGAGA+CGG 0.570345 5_3:-6934546 Msa0795050:three_prime_UTR
GAAGTATGAAGATTATTGAT+CGG 0.571287 5_3:-6936699 Msa0795050:CDS
GAGGAGACATTTATATGGCA+TGG 0.573299 5_3:-6938412 Msa0795050:CDS
CGGAACTACTGGTGACCCCA+AGG 0.575566 5_3:-6938802 Msa0795050:CDS
CACGCATCCACATTTGGTAC+AGG 0.577541 5_3:+6937009 None:intergenic
GTCGATGACATGTACAAAAG+TGG 0.581315 5_3:-6934693 Msa0795050:CDS
TTGTTTACAGTTGACCGAGA+AGG 0.588773 5_3:-6938485 Msa0795050:intron
ACTAGATATGCTTGGAACAG+TGG 0.597796 5_3:-6937037 Msa0795050:CDS
ACTTGTGCTCATGTCCTACA+AGG 0.599867 5_3:-6937452 Msa0795050:CDS
AGACATACAGATTCAACAGA+AGG 0.600672 5_3:+6936601 None:intergenic
AAAAGGAAATAAATGAGCAA+AGG 0.602266 5_3:+6934581 None:intergenic
CTCCTCAATGACCCTATCAA+AGG 0.603858 5_3:+6938429 None:intergenic
TTCAATAGGCTTCTGGCGCG+GGG 0.604361 5_3:-6938386 Msa0795050:intron
CATATATGACTTAGGTTCTG+GGG 0.607084 5_3:-6939737 Msa0795050:intron
AGCAATTGTGAGCTTCGGAA+AGG 0.607509 5_3:-6939413 Msa0795050:CDS
GTTCAAGTGCTGGTTTGCTG+GGG 0.614592 5_3:+6935875 None:intergenic
AGGTCTGACTGAAACTTGTG+CGG 0.616035 5_3:-6937085 Msa0795050:CDS
GGTCTGACTGAAACTTGTGC+GGG 0.616611 5_3:-6937084 Msa0795050:CDS
AGGATTTGAGTTCATAAAAG+CGG 0.618243 5_3:-6935296 Msa0795050:CDS
GGGTCCTCCTGTACCAAATG+TGG 0.620020 5_3:-6937016 Msa0795050:CDS
CGAGCTCTCAAAGATTGGAA+AGG 0.621868 5_3:-6935773 Msa0795050:CDS
GTTAACAACAGCAACAAGGA+AGG 0.622901 5_3:+6935897 None:intergenic
AATATATTCAAGCTTTCACA+AGG 0.623679 5_3:-6936670 Msa0795050:CDS
TATTATTACCCTCTTAGCTG+GGG 0.630451 5_3:-6938757 Msa0795050:CDS
ATTTATTATATGCCATGCAG+AGG 0.633133 5_3:-6939707 Msa0795050:CDS
AGCACCTCTATCTTTGCATG+TGG 0.633297 5_3:-6937495 Msa0795050:CDS
AGAAGAAAATGGTATATCTG+TGG 0.634186 5_3:-6935845 Msa0795050:CDS
GCCCTTGCAAGCACACCAAG+AGG 0.634649 5_3:-6936955 Msa0795050:CDS
TTAGGTGAAGCAAGGTTTAG+GGG 0.636898 5_3:-6937546 Msa0795050:intron
CTATCAAAGGTATGTGCGAG+AGG 0.639078 5_3:+6938442 None:intergenic
TTTGTAGTACCCCGAAAACA+AGG 0.639552 5_3:+6936909 None:intergenic
GCATCCACATTTGGTACAGG+AGG 0.639658 5_3:+6937012 None:intergenic
GTGGACTTCAATTCTCTCTG+TGG 0.641098 5_3:-6935826 Msa0795050:CDS
GTTGTTAATTGAAGATCTCG+GGG 0.643103 5_3:-6938214 Msa0795050:CDS
GTACTTGATAGAGTGTACTC+AGG 0.645216 5_3:-6938156 Msa0795050:intron
GTATCTTTCACAGTTGAGTG+AGG 0.647054 5_3:+6934512 None:intergenic
TTTGCAACGAATATTGTCAG+AGG 0.648137 5_3:+6934455 None:intergenic
AAATGCATTTCTCAGGCACG+GGG 0.650215 5_3:+6934663 None:intergenic
GGAACTACTGGTGACCCCAA+GGG 0.650731 5_3:-6938801 Msa0795050:CDS
ATGGTGCCAATTCTGCAGAG+TGG 0.660085 5_3:-6949207 Msa0795050:CDS
GTTCCATATCAAATGGAACT+GGG 0.663113 5_3:+6935263 None:intergenic
ATGCAATTGAGACCTCTGCA+TGG 0.666854 5_3:+6939695 None:intergenic
CAACAGGGGACATTGGAGAG+TGG 0.668033 5_3:-6936732 Msa0795050:intron
TTCCTGGGCAAAATTAACAA+TGG 0.668742 5_3:-6934404 Msa0795050:three_prime_UTR
TGGGGTTAACAACAGCAACA+AGG 0.674167 5_3:+6935893 None:intergenic
GAAGTGGAGATGCTACTGCA+TGG 0.677777 5_3:+6937683 None:intergenic
GAGACATTTATATGGCATGG+TGG 0.693735 5_3:-6938409 Msa0795050:CDS
TGTACAATAATGTATACTAG+CGG 0.713130 5_3:-6938822 Msa0795050:CDS
TGGATATCAATACTCCCTTG+GGG 0.718015 5_3:+6938787 None:intergenic
GGTTTGCAGGGTGTAAAATG+TGG 0.719983 5_3:-6949235 Msa0795050:exon
AGAAGAAAAGAAGATACCTG+AGG 0.728782 5_3:-6939668 Msa0795050:intron
TACACTCTATCAAGTACACG+AGG 0.731549 5_3:+6938162 None:intergenic
TGTGGAAAGTTACTTACGGG+TGG 0.735294 5_3:-6937477 Msa0795050:CDS
AGAGTGGATTATGAGCATGG+AGG 0.803600 5_3:-6949191 Msa0795050:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATATATAAATATAT+TGG + chr5_3:6937693-6937712 None:intergenic 0.0%
!!! TTATATTATTTTAAAAAAAA+AGG + chr5_3:6939822-6939841 None:intergenic 0.0%
!! AATAATCAATTATTATAAGT+CGG + chr5_3:6935468-6935487 None:intergenic 10.0%
!!! AAAATTTAAAATTACATGTA+TGG - chr5_3:6935594-6935613 Msa0795050:intron 10.0%
!! TTGATAAAATATGTATTTAA+GGG + chr5_3:6936850-6936869 None:intergenic 10.0%
!! ATTGATAAAATATGTATTTA+AGG + chr5_3:6936851-6936870 None:intergenic 10.0%
!! TATATATAAAAATCACATTT+AGG - chr5_3:6937702-6937721 Msa0795050:CDS 10.0%
!! ATTCAAAAATGTAATAATAT+TGG - chr5_3:6937735-6937754 Msa0795050:intron 10.0%
!! ATATTATACAATATTATTTG+GGG + chr5_3:6939992-6940011 None:intergenic 10.0%
!! TCTTGATATTAAATTAATTA+GGG + chr5_3:6940521-6940540 None:intergenic 10.0%
!! TTCTTGATATTAAATTAATT+AGG + chr5_3:6940522-6940541 None:intergenic 10.0%
!! AATAATCAATTATTATAAGT+CGG + chr5_3:6935468-6935487 None:intergenic 10.0%
!!! TTTGTTTTTGTTTTTTTTTT+TGG - chr5_3:6941904-6941923 Msa0795050:intron 10.0%
!!! TGTGTTTTATTTTATATAAA+GGG + chr5_3:6942187-6942206 None:intergenic 10.0%
!!! TTGTGTTTTATTTTATATAA+AGG + chr5_3:6942188-6942207 None:intergenic 10.0%
!! TTAAAAGGTTAAATAATAAA+AGG - chr5_3:6943192-6943211 Msa0795050:intron 10.0%
!! TAAAAGGTTAAATAATAAAA+GGG - chr5_3:6943193-6943212 Msa0795050:intron 10.0%
!!! TAGTTTTAATTTTCTTAATT+AGG - chr5_3:6945788-6945807 Msa0795050:intron 10.0%
!! TATATAGATACTATTTAAAT+TGG - chr5_3:6946788-6946807 Msa0795050:intron 10.0%
!!! TATTTTTTTCAACTTTATAT+GGG + chr5_3:6947074-6947093 None:intergenic 10.0%
!!! ATATTTTTTTCAACTTTATA+TGG + chr5_3:6947075-6947094 None:intergenic 10.0%
!!! AGTTTGATAATTTTTAATTA+CGG - chr5_3:6947216-6947235 Msa0795050:intron 10.0%
!! AAAATTTCACATTAATTTAA+AGG - chr5_3:6947931-6947950 Msa0795050:intron 10.0%
!! AAATTTCACATTAATTTAAA+GGG - chr5_3:6947932-6947951 Msa0795050:intron 10.0%
!! CAAATTAATATCTAGAAAAT+AGG + chr5_3:6934948-6934967 None:intergenic 15.0%
!!! TTTCTAGATATTAATTTGTA+AGG - chr5_3:6934950-6934969 Msa0795050:intron 15.0%
!! AGTTTAAAGAAAAAAAAATG+TGG - chr5_3:6936119-6936138 Msa0795050:intron 15.0%
!! TGATAAAATATGTATTTAAG+GGG + chr5_3:6936849-6936868 None:intergenic 15.0%
!!! CTTATATTTTATCATTATTG+AGG - chr5_3:6937203-6937222 Msa0795050:intron 15.0%
!! TAAATAGATTAGCATTATAT+TGG + chr5_3:6938006-6938025 None:intergenic 15.0%
!!! TAATAACAAAAGTTGTTATT+TGG - chr5_3:6938249-6938268 Msa0795050:intron 15.0%
!! AAAAAATTTCACTTCTATAT+AGG - chr5_3:6938436-6938455 Msa0795050:CDS 15.0%
!!! AATTTAGAGTAATAAATTAC+TGG - chr5_3:6938967-6938986 Msa0795050:intron 15.0%
!! TTGAAAACAAAAATATTATG+AGG - chr5_3:6939099-6939118 Msa0795050:intron 15.0%
!!! TTTACTAATTGATCATTTTT+TGG + chr5_3:6939184-6939203 None:intergenic 15.0%
!!! TTTACGATTTTAAATATTCT+TGG + chr5_3:6939271-6939290 None:intergenic 15.0%
!!! AAATTTTGTCAAATCTTAAA+AGG + chr5_3:6939442-6939461 None:intergenic 15.0%
!! TTATACTATTCTTGATTTAT+GGG + chr5_3:6939471-6939490 None:intergenic 15.0%
!! ATTATACTATTCTTGATTTA+TGG + chr5_3:6939472-6939491 None:intergenic 15.0%
!!! AATTTAAATCCCAAATTTTA+AGG - chr5_3:6939743-6939762 Msa0795050:intron 15.0%
!!! ATTTAAATCCCAAATTTTAA+GGG - chr5_3:6939744-6939763 Msa0795050:intron 15.0%
!!! TTGATAGAAAATTTTTCAAA+AGG + chr5_3:6940445-6940464 None:intergenic 15.0%
!!! AGTATTGTTTTACAATAAAA+GGG - chr5_3:6940471-6940490 Msa0795050:intron 15.0%
!! TTGATATTAAATTAATTAGG+GGG + chr5_3:6940519-6940538 None:intergenic 15.0%
!! CTTGATATTAAATTAATTAG+GGG + chr5_3:6940520-6940539 None:intergenic 15.0%
!! AAATATATTCAAATAATTGC+AGG - chr5_3:6941546-6941565 Msa0795050:intron 15.0%
!!! TTTTTTCTTTTTCAGAAAAA+GGG + chr5_3:6942265-6942284 None:intergenic 15.0%
!!! TTTTTTTCTTTTTCAGAAAA+AGG + chr5_3:6942266-6942285 None:intergenic 15.0%
!! GTGAAAAATTTATGTTTAAA+AGG - chr5_3:6943177-6943196 Msa0795050:intron 15.0%
!! AATAATAAAAGGGTTAAAAT+TGG - chr5_3:6943203-6943222 Msa0795050:intron 15.0%
!! AGAAAAAATTATTATTGCAT+TGG + chr5_3:6943394-6943413 None:intergenic 15.0%
!! TTAAAGAGAAAATAATCATT+TGG + chr5_3:6943458-6943477 None:intergenic 15.0%
!!! ATTTCTTAGTAGTTTATTTT+TGG - chr5_3:6943974-6943993 Msa0795050:intron 15.0%
!!! TTTCTTAGTAGTTTATTTTT+GGG - chr5_3:6943975-6943994 Msa0795050:intron 15.0%
!! ATTAAAAATCAAATTAGGAA+TGG + chr5_3:6944698-6944717 None:intergenic 15.0%
!! CAAGTATTAAAAATCAAATT+AGG + chr5_3:6944703-6944722 None:intergenic 15.0%
!!! TTTTTTTTCTTTTTCTTTTC+AGG - chr5_3:6945029-6945048 Msa0795050:intron 15.0%
!!! ATTTTTTTCAACTTTATATG+GGG + chr5_3:6947073-6947092 None:intergenic 15.0%
!! AATTTCACATTAATTTAAAG+GGG - chr5_3:6947933-6947952 Msa0795050:intron 15.0%
!!! ACAACAATTAATTTCAGTTT+TGG + chr5_3:6934918-6934937 None:intergenic 20.0%
!!! GATTAAGTCTATGTTATTTT+GGG + chr5_3:6935818-6935837 None:intergenic 20.0%
!!! TGATTAAGTCTATGTTATTT+TGG + chr5_3:6935819-6935838 None:intergenic 20.0%
!! ACGAATAGTAATTACTTATA+GGG - chr5_3:6935938-6935957 Msa0795050:intron 20.0%
!!! TCACGTTTTTTTATAAAACT+TGG + chr5_3:6936032-6936051 None:intergenic 20.0%
!! AAAATCCATAAAAGCAAAAT+AGG - chr5_3:6936057-6936076 Msa0795050:intron 20.0%
!!! AATTTCCTATTTTGCTTTTA+TGG + chr5_3:6936065-6936084 None:intergenic 20.0%
!!! AAAAAAAATGTGGATTAATG+TGG - chr5_3:6936129-6936148 Msa0795050:intron 20.0%
!!! ACTCTTGTTTATATATATGT+GGG + chr5_3:6936616-6936635 None:intergenic 20.0%
!!! TACTCTTGTTTATATATATG+TGG + chr5_3:6936617-6936636 None:intergenic 20.0%
!! TATATATAAACAAGAGTAAG+TGG - chr5_3:6936619-6936638 Msa0795050:CDS 20.0%
!! AATAATGTAATATTCAACAG+TGG - chr5_3:6936677-6936696 Msa0795050:CDS 20.0%
!! ATAATGTAATATTCAACAGT+GGG - chr5_3:6936678-6936697 Msa0795050:CDS 20.0%
!! ATATTCTGCATTTACAATTA+AGG - chr5_3:6936910-6936929 Msa0795050:CDS 20.0%
!! ACTATGTTTATAAAATTCTG+TGG + chr5_3:6936997-6937016 None:intergenic 20.0%
!!! TTGCTATTCTTTAATACTTA+TGG + chr5_3:6937255-6937274 None:intergenic 20.0%
!! ACTTATATTAATCTCATTCA+AGG - chr5_3:6937806-6937825 Msa0795050:intron 20.0%
!! TATAATAGAATACTCTATCA+AGG + chr5_3:6937900-6937919 None:intergenic 20.0%
!!! GACATAAGTATAAACATTTT+AGG - chr5_3:6937923-6937942 Msa0795050:intron 20.0%
!! TACTTAAATTTACTCAACTT+CGG - chr5_3:6938134-6938153 Msa0795050:intron 20.0%
!!! TTCTCTATTGATGAATATTT+TGG + chr5_3:6938650-6938669 None:intergenic 20.0%
!! TATATAAGAATTCAGATGTA+AGG - chr5_3:6938723-6938742 Msa0795050:intron 20.0%
!! TCAAAACAACTTATTAAGAA+TGG + chr5_3:6938774-6938793 None:intergenic 20.0%
!! TCTTGTCGTAATTAAATATT+TGG + chr5_3:6938924-6938943 None:intergenic 20.0%
!! AATGATCAATTAGTAAACTT+TGG - chr5_3:6939187-6939206 Msa0795050:intron 20.0%
!! TACTATTGTGAATTTATAGA+AGG + chr5_3:6939337-6939356 None:intergenic 20.0%
!! ATTCTTTACCCTTAAAATTT+GGG + chr5_3:6939755-6939774 None:intergenic 20.0%
!! TATTCTTTACCCTTAAAATT+TGG + chr5_3:6939756-6939775 None:intergenic 20.0%
!! TATAATATTTACCCGTTAAT+TGG - chr5_3:6939837-6939856 Msa0795050:intron 20.0%
!! ATAATATTTACCCGTTAATT+GGG - chr5_3:6939838-6939857 Msa0795050:intron 20.0%
!!! AATTTTACATTCCCAATTAA+CGG + chr5_3:6939852-6939871 None:intergenic 20.0%
!! ATATTTGTATCGAAAGAAAA+TGG - chr5_3:6940067-6940086 Msa0795050:intron 20.0%
!! TATTTGTATCGAAAGAAAAT+GGG - chr5_3:6940068-6940087 Msa0795050:intron 20.0%
!!! ATTTGGAATTTTAGAATTTC+CGG - chr5_3:6940244-6940263 Msa0795050:intron 20.0%
!! ATATGAACACGATTTAAAAA+GGG + chr5_3:6940315-6940334 None:intergenic 20.0%
!! AATATGAACACGATTTAAAA+AGG + chr5_3:6940316-6940335 None:intergenic 20.0%
!!! CAGTATTGTTTTACAATAAA+AGG - chr5_3:6940470-6940489 Msa0795050:intron 20.0%
!! AATAGGATAGATAAATGAAA+AGG + chr5_3:6941113-6941132 None:intergenic 20.0%
!! AGAATGAATGTATTGTATTA+AGG + chr5_3:6941216-6941235 None:intergenic 20.0%
!! ACAAAGAAATAAATAAGAAC+GGG + chr5_3:6941289-6941308 None:intergenic 20.0%
!! GACAAAGAAATAAATAAGAA+CGG + chr5_3:6941290-6941309 None:intergenic 20.0%
!! TAGTAAAGGAATATTATAGA+AGG + chr5_3:6941495-6941514 None:intergenic 20.0%
!!! TTTTGTTTTTTTTTTTGGTC+AGG - chr5_3:6941909-6941928 Msa0795050:intron 20.0%
!!! TTTGTTTTTTTTTTTGGTCA+GGG - chr5_3:6941910-6941929 Msa0795050:intron 20.0%
!!! AGATAGTTTATCACAATTTT+AGG + chr5_3:6942089-6942108 None:intergenic 20.0%
!!! TTTTATATAAAGGGTCAATT+TGG + chr5_3:6942178-6942197 None:intergenic 20.0%
!!! TTCTAAAACAAGTATATTAG+TGG + chr5_3:6942733-6942752 None:intergenic 20.0%
!! ATTATATTATGCTAATGTCT+TGG - chr5_3:6942757-6942776 Msa0795050:intron 20.0%
!! TTGTTATAATTTCCTGATTA+TGG + chr5_3:6942890-6942909 None:intergenic 20.0%
!! ATAATCAGGAAATTATAACA+AGG - chr5_3:6942889-6942908 Msa0795050:intron 20.0%
!! AAACATTTCCGAAAATAATT+CGG + chr5_3:6943044-6943063 None:intergenic 20.0%
!!! TGGAATTTTCAAAAATTTGT+CGG - chr5_3:6943223-6943242 Msa0795050:intron 20.0%
!! GTAACATAGTATTAATTGAA+GGG + chr5_3:6943428-6943447 None:intergenic 20.0%
!! TGTAACATAGTATTAATTGA+AGG + chr5_3:6943429-6943448 None:intergenic 20.0%
!! AAATTATCCTAATCAACTAT+TGG + chr5_3:6943492-6943511 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG - chr5_3:6943491-6943510 Msa0795050:intron 20.0%
!! ATGGCATATAATAAATTCTA+TGG + chr5_3:6943888-6943907 None:intergenic 20.0%
!!! GAGTTTTTGAAATAAAGATA+GGG + chr5_3:6944048-6944067 None:intergenic 20.0%
!!! TGAGTTTTTGAAATAAAGAT+AGG + chr5_3:6944049-6944068 None:intergenic 20.0%
!!! TCAAAAATTGGATGTTTTTT+TGG - chr5_3:6945312-6945331 Msa0795050:intron 20.0%
!! TATCAAGAAATGATTTACAA+AGG + chr5_3:6945501-6945520 None:intergenic 20.0%
!!! GTAAATCATTTCTTGATAAT+TGG - chr5_3:6945503-6945522 Msa0795050:intron 20.0%
!!! AATATACTTATTTTCTAGCT+GGG + chr5_3:6945584-6945603 None:intergenic 20.0%
!!! TAATATACTTATTTTCTAGC+TGG + chr5_3:6945585-6945604 None:intergenic 20.0%
!!! TTTGGTTTTGCAATTTTATT+AGG - chr5_3:6946035-6946054 Msa0795050:intron 20.0%
!!! GTATCTATATAGTTCAATTT+TGG + chr5_3:6946779-6946798 None:intergenic 20.0%
!! TAATGTAAAGTATACCAATA+TGG + chr5_3:6947444-6947463 None:intergenic 20.0%
!! TCATAATGAAATATAGAATG+TGG + chr5_3:6947471-6947490 None:intergenic 20.0%
!!! TTGTTCTAATTTGTTATGTA+TGG - chr5_3:6947884-6947903 Msa0795050:intron 20.0%
!! ATTTCACATTAATTTAAAGG+GGG - chr5_3:6947934-6947953 Msa0795050:intron 20.0%
!!! GTTTTTATATTACGTTGAAA+AGG + chr5_3:6948020-6948039 None:intergenic 20.0%
!!! ACTAAAAGTATATGATTAGA+TGG + chr5_3:6948046-6948065 None:intergenic 20.0%
!!! TCTCTGAACAAAATTATTTT+GGG + chr5_3:6948152-6948171 None:intergenic 20.0%
!!! TTCTCTGAACAAAATTATTT+TGG + chr5_3:6948153-6948172 None:intergenic 20.0%
!!! CTTTTTTTTTTTTTTCTTCC+CGG - chr5_3:6948515-6948534 Msa0795050:intron 20.0%
!! TTAGATATTCCAAATTACTT+AGG + chr5_3:6948679-6948698 None:intergenic 20.0%
!!! TAAGTAATTTGGAATATCTA+AGG - chr5_3:6948678-6948697 Msa0795050:intron 20.0%
!! ATAAAATATTATTCCATTCC+TGG - chr5_3:6949179-6949198 Msa0795050:intron 20.0%
!! TAAAATATTATTCCATTCCT+GGG - chr5_3:6949180-6949199 Msa0795050:intron 20.0%
!! ATTTTGAATTTCTTTCGTCT+TGG - chr5_3:6934439-6934458 Msa0795050:three_prime_UTR 25.0%
! GACTTTGATTAGAAAGTTTA+GGG + chr5_3:6934852-6934871 None:intergenic 25.0%
! TGACTTTGATTAGAAAGTTT+AGG + chr5_3:6934853-6934872 None:intergenic 25.0%
! AATTTGTATCTAGTGATTCA+TGG + chr5_3:6935118-6935137 None:intergenic 25.0%
! AGAATAATTAACCGTCTAAT+GGG - chr5_3:6935282-6935301 Msa0795050:CDS 25.0%
! ATGACGTTTAAATAGCTAAA+CGG - chr5_3:6935305-6935324 Msa0795050:intron 25.0%
! TATGATGAATTTGAGTGATT+GGG + chr5_3:6935402-6935421 None:intergenic 25.0%
! ATATGATGAATTTGAGTGAT+TGG + chr5_3:6935403-6935422 None:intergenic 25.0%
!!! CGGTGTCATAATATAAATTA+TGG + chr5_3:6935448-6935467 None:intergenic 25.0%
!!! ATATGATTTGTTTTCCCTAT+CGG + chr5_3:6935675-6935694 None:intergenic 25.0%
!!! CAGCATTTTTTAAAATGCTT+GGG + chr5_3:6935778-6935797 None:intergenic 25.0%
!!! ACAGCATTTTTTAAAATGCT+TGG + chr5_3:6935779-6935798 None:intergenic 25.0%
! TACTCATATATATAAGTCTG+TGG - chr5_3:6935857-6935876 Msa0795050:CDS 25.0%
! CTGTAATATTGAAAACTCAT+TGG + chr5_3:6935895-6935914 None:intergenic 25.0%
! CACGAATAGTAATTACTTAT+AGG - chr5_3:6935937-6935956 Msa0795050:intron 25.0%
! TGTAATTACACTCTCTTAAT+AGG + chr5_3:6935968-6935987 None:intergenic 25.0%
! AAATTCAATAATCCCCAAAT+TGG - chr5_3:6936080-6936099 Msa0795050:intron 25.0%
! TGTCTATGTTAATCCAATTT+GGG + chr5_3:6936096-6936115 None:intergenic 25.0%
!!! TTTTGTTATTGACATTCTAG+TGG + chr5_3:6936155-6936174 None:intergenic 25.0%
!!! AGTATGATATTGTGTTTTTG+TGG + chr5_3:6936209-6936228 None:intergenic 25.0%
! ATTTATGACCTCATAAAATG+TGG - chr5_3:6936264-6936283 Msa0795050:intron 25.0%
! GAATATGCACAATAATTTCT+TGG + chr5_3:6936328-6936347 None:intergenic 25.0%
! TGACAGATATTATCAAGAAT+TGG - chr5_3:6936870-6936889 Msa0795050:CDS 25.0%
! GACAGATATTATCAAGAATT+GGG - chr5_3:6936871-6936890 Msa0795050:CDS 25.0%
! AATTGTAAATGCAGAATATG+TGG + chr5_3:6936909-6936928 None:intergenic 25.0%
!!! GTGGAATTTTAATTGTGAAA+AGG + chr5_3:6936978-6936997 None:intergenic 25.0%
! ACACAAATTTGAGAAACATT+TGG - chr5_3:6937155-6937174 Msa0795050:intron 25.0%
!! TAACATAATCATCCTTTTGT+GGG + chr5_3:6937453-6937472 None:intergenic 25.0%
!! TTAACATAATCATCCTTTTG+TGG + chr5_3:6937454-6937473 None:intergenic 25.0%
!!! TTATTCTAAGAGTTCTTTTC+TGG + chr5_3:6938308-6938327 None:intergenic 25.0%
! AAACAACTTATTAAGAATGG+AGG + chr5_3:6938771-6938790 None:intergenic 25.0%
! TTAACAGATAAACAACAAAG+AGG - chr5_3:6938800-6938819 Msa0795050:CDS 25.0%
!!! TTGTCACAAATTGTTTTGAT+GGG + chr5_3:6939126-6939145 None:intergenic 25.0%
!!! TTTGTCACAAATTGTTTTGA+TGG + chr5_3:6939127-6939146 None:intergenic 25.0%
! ATCAAATCTTGCGAATATTT+AGG - chr5_3:6939777-6939796 Msa0795050:intron 25.0%
! TCAAATCTTGCGAATATTTA+GGG - chr5_3:6939778-6939797 Msa0795050:intron 25.0%
!! ATTTTACATTCCCAATTAAC+GGG + chr5_3:6939851-6939870 None:intergenic 25.0%
!!! ACGAATGAACAATTTTGATA+CGG + chr5_3:6940192-6940211 None:intergenic 25.0%
! GATCAAAGGAATTAACAATT+TGG - chr5_3:6940227-6940246 Msa0795050:intron 25.0%
! TAGCCATAATTGTATCTATT+TGG - chr5_3:6940618-6940637 Msa0795050:intron 25.0%
!! TACCAATTGATGAAAGTTTT+AGG - chr5_3:6940647-6940666 Msa0795050:intron 25.0%
!! ACCAATTGATGAAAGTTTTA+GGG - chr5_3:6940648-6940667 Msa0795050:intron 25.0%
! AATTTGTATCTAGTGATTCA+TGG + chr5_3:6935118-6935137 None:intergenic 25.0%
! AGAATAATTAACCGTCTAAT+GGG - chr5_3:6935282-6935301 Msa0795050:CDS 25.0%
! ATGACGTTTAAATAGCTAAA+CGG - chr5_3:6935305-6935324 Msa0795050:intron 25.0%
! TATGATGAATTTGAGTGATT+GGG + chr5_3:6935402-6935421 None:intergenic 25.0%
! ATATGATGAATTTGAGTGAT+TGG + chr5_3:6935403-6935422 None:intergenic 25.0%
!!! CGGTGTCATAATATAAATTA+TGG + chr5_3:6935448-6935467 None:intergenic 25.0%
! CATTTATCTATCCTATTAAC+CGG - chr5_3:6941116-6941135 Msa0795050:intron 25.0%
! TAGTCCTTGTTGAATATAAA+GGG - chr5_3:6941345-6941364 Msa0795050:intron 25.0%
! AAAACTTAATAACAATCGAG+TGG + chr5_3:6941525-6941544 None:intergenic 25.0%
!! ATACCTAAGGTATCATATAA+AGG + chr5_3:6941601-6941620 None:intergenic 25.0%
! TGTAAAATCTCATGTACAAT+AGG + chr5_3:6941692-6941711 None:intergenic 25.0%
!! GGTAAATTTTTCGCATAAAT+TGG + chr5_3:6941787-6941806 None:intergenic 25.0%
! AGGAACTTTGTAAATAAAAC+AGG + chr5_3:6941808-6941827 None:intergenic 25.0%
! AAAAACTTTGCTCATAAAGT+AGG + chr5_3:6942017-6942036 None:intergenic 25.0%
! CAAATTACGATTATATCACT+TGG + chr5_3:6942864-6942883 None:intergenic 25.0%
! ATTGTATAACTAGCATGAAT+CGG - chr5_3:6942961-6942980 Msa0795050:intron 25.0%
!! CTAGTATTCCGAATTATTTT+CGG - chr5_3:6943033-6943052 Msa0795050:intron 25.0%
!!! TGAGTGTTCTGAATTTTTTT+CGG - chr5_3:6943067-6943086 Msa0795050:intron 25.0%
!! GGAATTTTCAAAAATTTGTC+GGG - chr5_3:6943224-6943243 Msa0795050:intron 25.0%
!! GAATTTTCAAAAATTTGTCG+GGG - chr5_3:6943225-6943244 Msa0795050:intron 25.0%
! ACAAGTTATTATTGTTGTGA+GGG + chr5_3:6943286-6943305 None:intergenic 25.0%
! AACAAGTTATTATTGTTGTG+AGG + chr5_3:6943287-6943306 None:intergenic 25.0%
! AAACAAACCAATAGTTGATT+AGG - chr5_3:6943482-6943501 Msa0795050:intron 25.0%
!!! GACACTCATTTTAAAACAAA+GGG - chr5_3:6943578-6943597 Msa0795050:intron 25.0%
!!! ATTTTAAAACAAAGGGAGTA+CGG - chr5_3:6943585-6943604 Msa0795050:intron 25.0%
! TTTGGAAATGAGTTATACAT+GGG - chr5_3:6943627-6943646 Msa0795050:intron 25.0%
!!! TTTTAACACCCACTTTTTAT+CGG + chr5_3:6943670-6943689 None:intergenic 25.0%
!!! GTGTTTTTAGCATTTAATAC+TGG - chr5_3:6943694-6943713 Msa0795050:intron 25.0%
! ATCATCAATATCTACACTAT+GGG + chr5_3:6943729-6943748 None:intergenic 25.0%
!!! GATATTGATGATGAGTATTT+TGG - chr5_3:6943737-6943756 Msa0795050:intron 25.0%
! TGAATGTGAAAATGTTAGAA+TGG + chr5_3:6943793-6943812 None:intergenic 25.0%
!!! TTTGATTTTCCAATTATCAC+TGG - chr5_3:6943823-6943842 Msa0795050:intron 25.0%
!!! TTAGTAGTTTATTTTTGGGA+AGG - chr5_3:6943979-6943998 Msa0795050:intron 25.0%
! TTAAAATACATGTGCTTTAG+AGG - chr5_3:6944136-6944155 Msa0795050:intron 25.0%
!! TAAAATACATGTGCTTTAGA+GGG - chr5_3:6944137-6944156 Msa0795050:intron 25.0%
!!! ATGGACTGAATTTTTACAAT+TGG - chr5_3:6944261-6944280 Msa0795050:intron 25.0%
! CAATGCCAATTAATTATACA+AGG + chr5_3:6944354-6944373 None:intergenic 25.0%
! CAATTCAAGTAAGAAGAATA+AGG - chr5_3:6944508-6944527 Msa0795050:intron 25.0%
! TGTACAATAATGTATACTAG+CGG - chr5_3:6944777-6944796 Msa0795050:intron 25.0%
! TATATCTAATTTCAAAGCTC+TGG - chr5_3:6945000-6945019 Msa0795050:intron 25.0%
!! AGATTTTGTAAGTCAAAGAA+AGG + chr5_3:6945080-6945099 None:intergenic 25.0%
! TGTAAACAAAGAAAAAAGAG+GGG + chr5_3:6945103-6945122 None:intergenic 25.0%
! CTGTAAACAAAGAAAAAAGA+GGG + chr5_3:6945104-6945123 None:intergenic 25.0%
! ACTGTAAACAAAGAAAAAAG+AGG + chr5_3:6945105-6945124 None:intergenic 25.0%
! AAGTTGTTAATTGAAGATCT+CGG - chr5_3:6945383-6945402 Msa0795050:intron 25.0%
! AAAAATAGGTAAGAAATGTG+GGG + chr5_3:6945542-6945561 None:intergenic 25.0%
! GAAAAATAGGTAAGAAATGT+GGG + chr5_3:6945543-6945562 None:intergenic 25.0%
! AGAAAAATAGGTAAGAAATG+TGG + chr5_3:6945544-6945563 None:intergenic 25.0%
! TGAATCCTCTATATGATATT+AGG - chr5_3:6945716-6945735 Msa0795050:intron 25.0%
! AGTTTCCTAATATCATATAG+AGG + chr5_3:6945724-6945743 None:intergenic 25.0%
! AAGTTGAATAACATGAAGAA+AGG - chr5_3:6945887-6945906 Msa0795050:intron 25.0%
! TATATATGTGCTTATTGCAT+GGG + chr5_3:6946212-6946231 None:intergenic 25.0%
! ATATATATGTGCTTATTGCA+TGG + chr5_3:6946213-6946232 None:intergenic 25.0%
! TTGAAATACAAAACTAGACT+TGG + chr5_3:6946268-6946287 None:intergenic 25.0%
! TATTTCAATTGCTGAGTATA+TGG - chr5_3:6946280-6946299 Msa0795050:intron 25.0%
! TTTAAACAAATTTCTCCTCT+TGG + chr5_3:6946662-6946681 None:intergenic 25.0%
!! AGAGGAGAAATTTGTTTAAA+AGG - chr5_3:6946662-6946681 Msa0795050:intron 25.0%
! ATACTATTTAAATTGGCTGT+TGG - chr5_3:6946795-6946814 Msa0795050:intron 25.0%
! ATAATCTTCATACTTCCATT+AGG + chr5_3:6946896-6946915 None:intergenic 25.0%
! GAAGTATGAAGATTATTGAT+CGG - chr5_3:6946900-6946919 Msa0795050:intron 25.0%
! AATATATTCAAGCTTTCACA+AGG - chr5_3:6946929-6946948 Msa0795050:intron 25.0%
! ATGCAATTTGGATTATGTTA+AGG + chr5_3:6947309-6947328 None:intergenic 25.0%
! CTAGAAATAAGAATGCAATT+TGG + chr5_3:6947321-6947340 None:intergenic 25.0%
! AATAAAAGTTCAAATCAGCA+TGG + chr5_3:6947641-6947660 None:intergenic 25.0%
!! TCTAAAAAAGTATGTTGTGT+GGG + chr5_3:6947991-6948010 None:intergenic 25.0%
!! TTCTAAAAAAGTATGTTGTG+TGG + chr5_3:6947992-6948011 None:intergenic 25.0%
! AAAGTATATGATTAGATGGT+TGG + chr5_3:6948042-6948061 None:intergenic 25.0%
! GTTAATTAAGATTCAATGAC+TGG - chr5_3:6948122-6948141 Msa0795050:intron 25.0%
!!! TGTTCAGAGAATATTTTAAG+TGG - chr5_3:6948162-6948181 Msa0795050:intron 25.0%
! ACATGTAGAATAGAATCAAT+TGG + chr5_3:6948212-6948231 None:intergenic 25.0%
!!! ATATGTTTTTGACAGTTGAA+AGG - chr5_3:6948283-6948302 Msa0795050:intron 25.0%
! TAGTTGAATCCTAAGTAATT+TGG - chr5_3:6948667-6948686 Msa0795050:intron 25.0%
! AATTATCAAGTCCATAAAAC+AGG + chr5_3:6948833-6948852 None:intergenic 25.0%
! AAAAGGAAATAAATGAGCAA+AGG + chr5_3:6949021-6949040 None:intergenic 25.0%
!! TTTGCTCATTTATTTCCTTT+TGG - chr5_3:6949020-6949039 Msa0795050:intron 25.0%
! TACATATGATTATGAAGAGA+CGG - chr5_3:6949053-6949072 Msa0795050:intron 25.0%
GGTGTAAAATGTGGTATTTA+TGG - chr5_3:6934373-6934392 Msa0795050:three_prime_UTR 30.0%
! CATTGAACTGACTCAATATT+TGG + chr5_3:6934637-6934656 None:intergenic 30.0%
CAAATATTGAGTCAGTTCAA+TGG - chr5_3:6934635-6934654 Msa0795050:three_prime_UTR 30.0%
!! AACTCTTAGGATACTTTTTG+GGG + chr5_3:6934728-6934747 None:intergenic 30.0%
!! CAACTCTTAGGATACTTTTT+GGG + chr5_3:6934729-6934748 None:intergenic 30.0%
! ACAACTCTTAGGATACTTTT+TGG + chr5_3:6934730-6934749 None:intergenic 30.0%
TCTAATCAAAGTCATTGTAG+AGG - chr5_3:6934859-6934878 Msa0795050:intron 30.0%
! ATCCGATTGATGAAAGTTTT+AGG - chr5_3:6935086-6935105 Msa0795050:intron 30.0%
! TCCGATTGATGAAAGTTTTA+GGG - chr5_3:6935087-6935106 Msa0795050:intron 30.0%
ACCCTAAAACTTTCATCAAT+CGG + chr5_3:6935091-6935110 None:intergenic 30.0%
AGATTGTGTACCTTTGAATT+AGG - chr5_3:6935169-6935188 Msa0795050:intron 30.0%
CATTAGACGGTTAATTATTC+TGG + chr5_3:6935283-6935302 None:intergenic 30.0%
CAGAATAATTAACCGTCTAA+TGG - chr5_3:6935281-6935300 Msa0795050:CDS 30.0%
ATTTAGATAAGCCCAATGAT+AGG + chr5_3:6935344-6935363 None:intergenic 30.0%
TATCATTGGGCTTATCTAAA+TGG - chr5_3:6935343-6935362 Msa0795050:intron 30.0%
! ATTGGGCTTTTGTAACTAAA+TGG + chr5_3:6935385-6935404 None:intergenic 30.0%
GTGACACGTTTGAATTAAAA+AGG - chr5_3:6935735-6935754 Msa0795050:intron 30.0%
!!! CTATGTTATTTTGGGTTAGT+GGG + chr5_3:6935810-6935829 None:intergenic 30.0%
!!! TCTATGTTATTTTGGGTTAG+TGG + chr5_3:6935811-6935830 None:intergenic 30.0%
ATATATAAGTCTGTGGTTAG+TGG - chr5_3:6935864-6935883 Msa0795050:CDS 30.0%
GTCTATGTTAATCCAATTTG+GGG + chr5_3:6936095-6936114 None:intergenic 30.0%
GTGTCTATGTTAATCCAATT+TGG + chr5_3:6936097-6936116 None:intergenic 30.0%
AACACAATATCATACTCGAT+AGG - chr5_3:6936213-6936232 Msa0795050:intron 30.0%
! GATGCTTAAGTCAATTTTGT+TGG + chr5_3:6936350-6936369 None:intergenic 30.0%
CTTGTGCACACTATAAAATA+TGG + chr5_3:6936463-6936482 None:intergenic 30.0%
TATATATATGTGGGATCAGT+GGG + chr5_3:6936607-6936626 None:intergenic 30.0%
TTATATATATGTGGGATCAG+TGG + chr5_3:6936608-6936627 None:intergenic 30.0%
TTGAGTTCATGAAACTCTAT+TGG + chr5_3:6936759-6936778 None:intergenic 30.0%
AGCAGAATTATTAACACAAG+TGG - chr5_3:6936802-6936821 Msa0795050:intron 30.0%
CATCATACTCTGTCATATAA+CGG + chr5_3:6937022-6937041 None:intergenic 30.0%
! TGAGATGAGTCTCTAAAAAT+AGG - chr5_3:6937070-6937089 Msa0795050:CDS 30.0%
! AGAATGATATTTTCTCCACT+TGG - chr5_3:6937401-6937420 Msa0795050:intron 30.0%
TAAACTATCTTACCCACAAA+AGG - chr5_3:6937438-6937457 Msa0795050:intron 30.0%
TTAAGTAATGTCATACCGAT+AGG - chr5_3:6937470-6937489 Msa0795050:CDS 30.0%
TAAGTAATGTCATACCGATA+GGG - chr5_3:6937471-6937490 Msa0795050:CDS 30.0%
! TGATTAGTTCTCTATCAAGT+GGG + chr5_3:6937535-6937554 None:intergenic 30.0%
! ATGATTAGTTCTCTATCAAG+TGG + chr5_3:6937536-6937555 None:intergenic 30.0%
ATTAATAACAACACACCGAT+AGG - chr5_3:6937968-6937987 Msa0795050:CDS 30.0%
TTAATAACAACACACCGATA+GGG - chr5_3:6937969-6937988 Msa0795050:CDS 30.0%
AATAAGCAATAAGTCACAAG+AGG - chr5_3:6938515-6938534 Msa0795050:intron 30.0%
GTTAAGTCATCAAAATTCAG+TGG + chr5_3:6938601-6938620 None:intergenic 30.0%
! TGACACGACAAATAATTTTG+AGG - chr5_3:6939506-6939525 Msa0795050:intron 30.0%
! GACACGACAAATAATTTTGA+GGG - chr5_3:6939507-6939526 Msa0795050:intron 30.0%
TGATACATCAATCTCAAGTT+TGG - chr5_3:6939878-6939897 Msa0795050:intron 30.0%
GATACATCAATCTCAAGTTT+GGG - chr5_3:6939879-6939898 Msa0795050:intron 30.0%
! AACCAATTTTCAATGATCCA+AGG + chr5_3:6940094-6940113 None:intergenic 30.0%
GATTTCCTTTATTACTGATC+CGG + chr5_3:6940117-6940136 None:intergenic 30.0%
GGATCAGTAATAAAGGAAAT+CGG - chr5_3:6940116-6940135 Msa0795050:intron 30.0%
GATCAGTAATAAAGGAAATC+GGG - chr5_3:6940117-6940136 Msa0795050:intron 30.0%
ATCAGTAATAAAGGAAATCG+GGG - chr5_3:6940118-6940137 Msa0795050:intron 30.0%
!! CGAATGAACAATTTTGATAC+GGG + chr5_3:6940191-6940210 None:intergenic 30.0%
CGAAAACAAAACAAATCAAC+CGG + chr5_3:6940266-6940285 None:intergenic 30.0%
GACAATAACATGTTAATGCT+TGG + chr5_3:6940293-6940312 None:intergenic 30.0%
! ATTCAAAAGCTTTGTGACTA+TGG - chr5_3:6940376-6940395 Msa0795050:intron 30.0%
TCGTATGAACTCTGTTTAAT+TGG + chr5_3:6940577-6940596 None:intergenic 30.0%
GAGCCAAATAGATACAATTA+TGG + chr5_3:6940624-6940643 None:intergenic 30.0%
ACCCTAAAACTTTCATCAAT+TGG + chr5_3:6935091-6935110 None:intergenic 30.0%
AGATTGTGTACCTTTGAATT+AGG - chr5_3:6935169-6935188 Msa0795050:intron 30.0%
CATTAGACGGTTAATTATTC+TGG + chr5_3:6935283-6935302 None:intergenic 30.0%
CAGAATAATTAACCGTCTAA+TGG - chr5_3:6935281-6935300 Msa0795050:CDS 30.0%
ATTTAGATAAGCCCAATGAT+AGG + chr5_3:6935344-6935363 None:intergenic 30.0%
TATCATTGGGCTTATCTAAA+TGG - chr5_3:6935343-6935362 Msa0795050:intron 30.0%
! ATTGGGCTTTTGTAACTAAA+TGG + chr5_3:6935385-6935404 None:intergenic 30.0%
AGGATAGATAAATGAAAAGG+AGG + chr5_3:6941110-6941129 None:intergenic 30.0%
ACAGTTGAAAAACAGATGTA+TGG + chr5_3:6941150-6941169 None:intergenic 30.0%
! TTAAAAGTGTATTCTAGGAG+AGG + chr5_3:6941183-6941202 None:intergenic 30.0%
TGTATTGTATTAAGGAGAGA+GGG + chr5_3:6941208-6941227 None:intergenic 30.0%
ATGTATTGTATTAAGGAGAG+AGG + chr5_3:6941209-6941228 None:intergenic 30.0%
! ATTCTGTTTGTTGCAGATTA+TGG - chr5_3:6941231-6941250 Msa0795050:intron 30.0%
! TTGTCTCCTATGTTTTCTTT+TGG - chr5_3:6941305-6941324 Msa0795050:intron 30.0%
GAACAACCAAAAGAAAACAT+AGG + chr5_3:6941314-6941333 None:intergenic 30.0%
GTAGTCCTTGTTGAATATAA+AGG - chr5_3:6941344-6941363 Msa0795050:intron 30.0%
ATTGCCCTTTATATTCAACA+AGG + chr5_3:6941352-6941371 None:intergenic 30.0%
GATGAAACAGAGTTTCAATA+AGG + chr5_3:6941384-6941403 None:intergenic 30.0%
TTATTGCTCTTATGCTTTCA+TGG - chr5_3:6941444-6941463 Msa0795050:intron 30.0%
AATATTATAGAAGGTGACCA+GGG + chr5_3:6941486-6941505 None:intergenic 30.0%
GTTCCTTTATATGATACCTT+AGG - chr5_3:6941595-6941614 Msa0795050:intron 30.0%
AATCTCATGTACAATAGGTT+TGG + chr5_3:6941687-6941706 None:intergenic 30.0%
! TTGCAACGTTTTTGTCAATA+TGG - chr5_3:6941732-6941751 Msa0795050:intron 30.0%
TAAGAACTTTGATGTCTATC+TGG - chr5_3:6941875-6941894 Msa0795050:intron 30.0%
! GTAGTTTGTGTTAAATGTTG+GGG + chr5_3:6942156-6942175 None:intergenic 30.0%
! GGTAGTTTGTGTTAAATGTT+GGG + chr5_3:6942157-6942176 None:intergenic 30.0%
! TGGTAGTTTGTGTTAAATGT+TGG + chr5_3:6942158-6942177 None:intergenic 30.0%
!!! TGTTTTTTCCAGAAAAGTGT+GGG + chr5_3:6942229-6942248 None:intergenic 30.0%
ATTAAGAGAACAAGGAAAGA+AGG + chr5_3:6942325-6942344 None:intergenic 30.0%
!!! TTAAGGTTTGCTAGGTTTTT+TGG - chr5_3:6942403-6942422 Msa0795050:intron 30.0%
!!! TAAGGTTTGCTAGGTTTTTT+GGG - chr5_3:6942404-6942423 Msa0795050:intron 30.0%
TAGCATATAATTCCATCACT+TGG + chr5_3:6942921-6942940 None:intergenic 30.0%
AGTTATACAATTCCATCACT+TGG + chr5_3:6942952-6942971 None:intergenic 30.0%
TGTTCTCCGGTATATATATT+CGG - chr5_3:6942997-6943016 Msa0795050:intron 30.0%
!!! ATTTTTTTCGGAAACGTTTC+AGG - chr5_3:6943079-6943098 Msa0795050:intron 30.0%
!!! TTTTTTTCGGAAACGTTTCA+GGG - chr5_3:6943080-6943099 Msa0795050:intron 30.0%
ATTAGGAGATGTTGAAAATG+AGG - chr5_3:6943154-6943173 Msa0795050:intron 30.0%
TTAGGAGATGTTGAAAATGA+GGG - chr5_3:6943155-6943174 Msa0795050:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr5_3:6943328-6943347 None:intergenic 30.0%
!!! CGACACTCATTTTAAAACAA+AGG - chr5_3:6943577-6943596 Msa0795050:intron 30.0%
! CTTTGGAAATGAGTTATACA+TGG - chr5_3:6943626-6943645 Msa0795050:intron 30.0%
!!! TTTAACACCCACTTTTTATC+GGG + chr5_3:6943669-6943688 None:intergenic 30.0%
CATCATCAATATCTACACTA+TGG + chr5_3:6943730-6943749 None:intergenic 30.0%
!!! TTGATGATGAGTATTTTGGT+AGG - chr5_3:6943741-6943760 Msa0795050:intron 30.0%
!! AATGGCATTTATTTTCGAAG+TGG + chr5_3:6943775-6943794 None:intergenic 30.0%
GTATCAAAACCAGTGATAAT+TGG + chr5_3:6943835-6943854 None:intergenic 30.0%
CTCTCATACATATATGACTT+AGG - chr5_3:6943854-6943873 Msa0795050:intron 30.0%
TACATATATGACTTAGGTTC+TGG - chr5_3:6943860-6943879 Msa0795050:intron 30.0%
ACATATATGACTTAGGTTCT+GGG - chr5_3:6943861-6943880 Msa0795050:intron 30.0%
ATTTATTATATGCCATGCAG+AGG - chr5_3:6943892-6943911 Msa0795050:intron 30.0%
TATTTCAATAGATGAACCTC+AGG + chr5_3:6943950-6943969 None:intergenic 30.0%
TTGAGATATTTGGTTGCATT+TGG + chr5_3:6944088-6944107 None:intergenic 30.0%
ACACTTACTCTTGAGATATT+TGG + chr5_3:6944098-6944117 None:intergenic 30.0%
!! TTGGATTGGCAATATATTCA+TGG - chr5_3:6944242-6944261 Msa0795050:intron 30.0%
TTCTACTCTTGCTTGTAAAT+TGG - chr5_3:6944314-6944333 Msa0795050:intron 30.0%
CTGCTCCTTGTATAATTAAT+TGG - chr5_3:6944346-6944365 Msa0795050:intron 30.0%
GTTGAATTGTATCACTATCT+CGG - chr5_3:6944415-6944434 Msa0795050:intron 30.0%
AGAAGAATAAGGATGATATC+AGG - chr5_3:6944519-6944538 Msa0795050:intron 30.0%
TGGAAAGTAAATGCATTGTT+TGG - chr5_3:6944546-6944565 Msa0795050:intron 30.0%
! ATTGTTTGGTTAGTTGACTT+AGG - chr5_3:6944560-6944579 Msa0795050:intron 30.0%
TCTAAACCTCATTACAAGTA+TGG - chr5_3:6944621-6944640 Msa0795050:intron 30.0%
CTACTTCTATAGACATATTG+TGG - chr5_3:6944669-6944688 Msa0795050:intron 30.0%
! TGATTTTTAATACTTGCCAC+AGG - chr5_3:6944707-6944726 Msa0795050:intron 30.0%
! GATTTTTAATACTTGCCACA+GGG - chr5_3:6944708-6944727 Msa0795050:intron 30.0%
! ATATCGCTTCTTTTCTTTAC+AGG + chr5_3:6944756-6944775 None:intergenic 30.0%
TCATTGAGGAGACATTTATA+TGG - chr5_3:6945182-6945201 Msa0795050:intron 30.0%
!!! ATCCAATTTTTGACTTGTTG+GGG + chr5_3:6945305-6945324 None:intergenic 30.0%
!!! CATCCAATTTTTGACTTGTT+GGG + chr5_3:6945306-6945325 None:intergenic 30.0%
!!! ACATCCAATTTTTGACTTGT+TGG + chr5_3:6945307-6945326 None:intergenic 30.0%
AGTTGTTAATTGAAGATCTC+GGG - chr5_3:6945384-6945403 Msa0795050:intron 30.0%
!!! AAAACCAACTTTTTTCTGTG+CGG - chr5_3:6945412-6945431 Msa0795050:intron 30.0%
! TCATTTCTTGATAATTGGAG+TGG - chr5_3:6945508-6945527 Msa0795050:intron 30.0%
! CATTTCTTGATAATTGGAGT+GGG - chr5_3:6945509-6945528 Msa0795050:intron 30.0%
AAAATAGGTAAGAAATGTGG+GGG + chr5_3:6945541-6945560 None:intergenic 30.0%
!!! TTATTTTCTAGCTGGGAAAA+GGG + chr5_3:6945577-6945596 None:intergenic 30.0%
TTGACACAGAAAATTTCTTC+TGG - chr5_3:6945630-6945649 Msa0795050:intron 30.0%
AGTTGAATAATGTCTTCTTC+AGG + chr5_3:6945662-6945681 None:intergenic 30.0%
AAATTCTCAGAGCTTATGTT+TGG + chr5_3:6945859-6945878 None:intergenic 30.0%
! AACACAATTTTGTCAAGAAG+TGG + chr5_3:6945935-6945954 None:intergenic 30.0%
TGACAAAATTGTGTTCGATA+AGG - chr5_3:6945940-6945959 Msa0795050:intron 30.0%
! CAATTTTATTAGGTGAAGCA+AGG - chr5_3:6946045-6946064 Msa0795050:intron 30.0%
TAGTCTAACTGAAATCTATG+TGG - chr5_3:6946387-6946406 Msa0795050:intron 30.0%
CATTATTACATATGCTGCAT+TGG + chr5_3:6946437-6946456 None:intergenic 30.0%
AGATATCAGCATATGTACTA+TGG - chr5_3:6946458-6946477 Msa0795050:intron 30.0%
GTCTTTGTTGAAATGAAAAC+AGG - chr5_3:6946494-6946513 Msa0795050:intron 30.0%
!! TTCATTTGGTAATGAGACAA+AGG + chr5_3:6946543-6946562 None:intergenic 30.0%
ATTTAAATTGGCTGTTGGAT+TGG - chr5_3:6946800-6946819 Msa0795050:intron 30.0%
AATTGCGTGATTTATTCAAC+AGG - chr5_3:6946851-6946870 Msa0795050:intron 30.0%
ATTGCGTGATTTATTCAACA+GGG - chr5_3:6946852-6946871 Msa0795050:intron 30.0%
GAATAATTTCACTACAAGCT+AGG + chr5_3:6947051-6947070 None:intergenic 30.0%
AAATATTAGCTGCTCATGAT+TGG + chr5_3:6947189-6947208 None:intergenic 30.0%
!! ATTGCATTCTTATTTCTAGC+TGG - chr5_3:6947322-6947341 Msa0795050:intron 30.0%
AGAAGAAAATGGTATATCTG+TGG - chr5_3:6947754-6947773 Msa0795050:intron 30.0%
AAAGATTGGAAAGGAAAAGA+AGG - chr5_3:6947835-6947854 Msa0795050:intron 30.0%
!! TATTTTAAGTGGTCTGTGTA+TGG - chr5_3:6948173-6948192 Msa0795050:intron 30.0%
! CCATCATCACATAAATTTTC+AGG + chr5_3:6948263-6948282 None:intergenic 30.0%
CCTGAAAATTTATGTGATGA+TGG - chr5_3:6948260-6948279 Msa0795050:intron 30.0%
! AGGATTTGAGTTCATAAAAG+CGG - chr5_3:6948303-6948322 Msa0795050:intron 30.0%
GTAAAAGTTGTCAAATTCTC+AGG - chr5_3:6948418-6948437 Msa0795050:intron 30.0%
GATATTAAAGCAGAGAAACA+GGG + chr5_3:6948609-6948628 None:intergenic 30.0%
TGATATTAAAGCAGAGAAAC+AGG + chr5_3:6948610-6948629 None:intergenic 30.0%
! TTGAAACGTTAAAAGTGCAA+TGG + chr5_3:6948808-6948827 None:intergenic 30.0%
! ATATTCGTTGCAAACTTTTG+TGG - chr5_3:6949153-6949172 Msa0795050:intron 30.0%
CACAAAACAAGACCTTCAAT+GGG + chr5_3:6934543-6934562 None:intergenic 35.0%
!! ACTTTTTGGGGGACTTAAAT+CGG + chr5_3:6934716-6934735 None:intergenic 35.0%
!! ACTCTTAGGATACTTTTTGG+GGG + chr5_3:6934727-6934746 None:intergenic 35.0%
AAAAGTTGGACACATTGGAT+TGG + chr5_3:6934815-6934834 None:intergenic 35.0%
AGAAACAAGAGGGAAAAAGT+TGG + chr5_3:6934829-6934848 None:intergenic 35.0%
AAGTTTAGGGAGAAACAAGA+GGG + chr5_3:6934839-6934858 None:intergenic 35.0%
AAAGTTTAGGGAGAAACAAG+AGG + chr5_3:6934840-6934859 None:intergenic 35.0%
CCTCAATTAAAGCCTATAAC+TGG + chr5_3:6934893-6934912 None:intergenic 35.0%
! CCAGTTATAGGCTTTAATTG+AGG - chr5_3:6934890-6934909 Msa0795050:intron 35.0%
CCTTCATCAACCTAATTCAA+AGG + chr5_3:6935182-6935201 None:intergenic 35.0%
!! CCTTTGAATTAGGTTGATGA+AGG - chr5_3:6935179-6935198 Msa0795050:intron 35.0%
! CGGTTAATTATTCTGGAGAT+TGG + chr5_3:6935276-6935295 None:intergenic 35.0%
TTAAACGTCATCCCATTAGA+CGG + chr5_3:6935296-6935315 None:intergenic 35.0%
TTTAAATAGCTAAACGGCTG+AGG - chr5_3:6935311-6935330 Msa0795050:intron 35.0%
TTAAATAGCTAAACGGCTGA+GGG - chr5_3:6935312-6935331 Msa0795050:intron 35.0%
! TTGAGTATTGTCATCCAAGT+GGG + chr5_3:6935534-6935553 None:intergenic 35.0%
! ATTGAGTATTGTCATCCAAG+TGG + chr5_3:6935535-6935554 None:intergenic 35.0%
TGCAGAAATTGAATCCGATA+GGG - chr5_3:6935658-6935677 Msa0795050:intron 35.0%
CAGAAGTCATATATCCACAT+AGG - chr5_3:6935912-6935931 Msa0795050:CDS 35.0%
TTACTATTCGTGTACCTATG+TGG + chr5_3:6935929-6935948 None:intergenic 35.0%
! CCAACATTCCACATTTTATG+AGG + chr5_3:6936275-6936294 None:intergenic 35.0%
CCTCATAAAATGTGGAATGT+TGG - chr5_3:6936272-6936291 Msa0795050:intron 35.0%
ATCTCAGTGAGCATCATAAT+TGG + chr5_3:6936372-6936391 None:intergenic 35.0%
! ATAGTGTGCACAAGAGTATA+TGG - chr5_3:6936469-6936488 Msa0795050:intron 35.0%
TGCAAGATCATCAACATAAG+TGG - chr5_3:6936716-6936735 Msa0795050:CDS 35.0%
ATGCTCATGTGCAAAATATG+TGG + chr5_3:6936782-6936801 None:intergenic 35.0%
TTAACACAAGTGGTAACTCA+AGG - chr5_3:6936812-6936831 Msa0795050:intron 35.0%
AAACATTTGGTTACAAGCAG+CGG - chr5_3:6937168-6937187 Msa0795050:intron 35.0%
! ATGATATTTTCTCCACTTGG+TGG - chr5_3:6937404-6937423 Msa0795050:intron 35.0%
CTATGTATTGTGTAACGTGA+TGG + chr5_3:6937502-6937521 None:intergenic 35.0%
ATTGTAATCTCACCTATCGT+GGG + chr5_3:6938049-6938068 None:intergenic 35.0%
AATTGTAATCTCACCTATCG+TGG + chr5_3:6938050-6938069 None:intergenic 35.0%
!! ATTCAGTGGCTCTAAGTATA+AGG + chr5_3:6938587-6938606 None:intergenic 35.0%
!! CACAAGTTTCGAAAAGTGTT+AGG - chr5_3:6939916-6939935 Msa0795050:intron 35.0%
TGTTAGGAATCTTCACACAA+GGG - chr5_3:6939932-6939951 Msa0795050:intron 35.0%
ACAAGGGAATACGATATATC+AGG - chr5_3:6939948-6939967 Msa0795050:intron 35.0%
CAAGGGAATACGATATATCA+GGG - chr5_3:6939949-6939968 Msa0795050:intron 35.0%
! GGATCATTGAAAATTGGTTC+CGG - chr5_3:6940095-6940114 Msa0795050:intron 35.0%
GTTAATTCCTTTGATCCGTA+CGG + chr5_3:6940223-6940242 None:intergenic 35.0%
TCAAAACTATAACTACCCGT+AGG - chr5_3:6940413-6940432 Msa0795050:intron 35.0%
TTTCAAAAGGCTCATTCCTA+CGG + chr5_3:6940432-6940451 None:intergenic 35.0%
CCTTCATCAACCTAATTCAA+AGG + chr5_3:6935182-6935201 None:intergenic 35.0%
!! CCTTTGAATTAGGTTGATGA+AGG - chr5_3:6935179-6935198 Msa0795050:intron 35.0%
! CGGTTAATTATTCTGGAGAT+TGG + chr5_3:6935276-6935295 None:intergenic 35.0%
TTAAACGTCATCCCATTAGA+CGG + chr5_3:6935296-6935315 None:intergenic 35.0%
TTTAAATAGCTAAACGGCTG+AGG - chr5_3:6935311-6935330 Msa0795050:intron 35.0%
TTAAATAGCTAAACGGCTGA+GGG - chr5_3:6935312-6935331 Msa0795050:intron 35.0%
! GAGGTTAGAAGAGTACAAAT+CGG + chr5_3:6941091-6941110 None:intergenic 35.0%
GAAAAACAGATGTATGGTGT+AGG + chr5_3:6941144-6941163 None:intergenic 35.0%
! GGGGATTAAAAGTGTATTCT+AGG + chr5_3:6941188-6941207 None:intergenic 35.0%
GTATTGTATTAAGGAGAGAG+GGG + chr5_3:6941207-6941226 None:intergenic 35.0%
GAATATTATAGAAGGTGACC+AGG + chr5_3:6941487-6941506 None:intergenic 35.0%
TAAACGTTTACGCATACCTA+AGG + chr5_3:6941614-6941633 None:intergenic 35.0%
! CTTTGACTGCAATTGGATTT+TGG - chr5_3:6941658-6941677 Msa0795050:intron 35.0%
TTTAGGCAACTGACAGATTT+CGG + chr5_3:6942072-6942091 None:intergenic 35.0%
GTGATAAACTATCTCACAAC+AGG - chr5_3:6942095-6942114 Msa0795050:intron 35.0%
!!! GTTTTTTCCAGAAAAGTGTG+GGG + chr5_3:6942228-6942247 None:intergenic 35.0%
!!! GTGTTTTTTCCAGAAAAGTG+TGG + chr5_3:6942230-6942249 None:intergenic 35.0%
TGAAAGTAGACACAGAACAA+TGG + chr5_3:6942290-6942309 None:intergenic 35.0%
CAAACCTTAATCAAGGATTC+CGG + chr5_3:6942393-6942412 None:intergenic 35.0%
! ATCCTTGATTAAGGTTTGCT+AGG - chr5_3:6942395-6942414 Msa0795050:intron 35.0%
AACCTAGCAAACCTTAATCA+AGG + chr5_3:6942400-6942419 None:intergenic 35.0%
!!! TTTTTTGGGTTAGTGGTTAC+CGG - chr5_3:6942418-6942437 Msa0795050:intron 35.0%
TCGTTGTCAATTGACAATTC+CGG + chr5_3:6942440-6942459 None:intergenic 35.0%
GGAAATGACGATGTATGAAA+TGG - chr5_3:6942478-6942497 Msa0795050:intron 35.0%
!!! CGCTTTTTCTGGAAAACAAT+CGG + chr5_3:6942545-6942564 None:intergenic 35.0%
AATACTTCCCCAAACTATTC+CGG + chr5_3:6942593-6942612 None:intergenic 35.0%
!! AATAGTTTGGGGAAGTATTC+CGG - chr5_3:6942594-6942613 Msa0795050:intron 35.0%
AAATGAAAGCTGCAGACATA+AGG + chr5_3:6942629-6942648 None:intergenic 35.0%
TAAAAGATGCATACGAGTTC+AGG + chr5_3:6942679-6942698 None:intergenic 35.0%
! CGTAATTTGTGACCATAATC+AGG - chr5_3:6942875-6942894 Msa0795050:intron 35.0%
ATAACTAGCATGAATCGGAA+AGG - chr5_3:6942966-6942985 Msa0795050:intron 35.0%
!! AAAGGTATTTCTGTGTTCTC+CGG - chr5_3:6942984-6943003 Msa0795050:intron 35.0%
ATTCGGAATACTAGAATGCT+TGG + chr5_3:6943027-6943046 None:intergenic 35.0%
TTTCAGGGAAGAACGAAAAA+CGG - chr5_3:6943095-6943114 Msa0795050:intron 35.0%
GGAAATACGTACTTAGAAGT+GGG - chr5_3:6943116-6943135 Msa0795050:intron 35.0%
GAAATACGTACTTAGAAGTG+GGG - chr5_3:6943117-6943136 Msa0795050:intron 35.0%
AATTACATGTGTTGGGGTAT+AGG - chr5_3:6943251-6943270 Msa0795050:intron 35.0%
ATTACATGTGTTGGGGTATA+GGG - chr5_3:6943252-6943271 Msa0795050:intron 35.0%
TTCCTTAATCTGTGTGCAAT+TGG - chr5_3:6943548-6943567 Msa0795050:intron 35.0%
GATTTGACCCGATAAAAAGT+GGG - chr5_3:6943659-6943678 Msa0795050:intron 35.0%
CATATATGACTTAGGTTCTG+GGG - chr5_3:6943862-6943881 Msa0795050:intron 35.0%
AGAAGAAAAGAAGATACCTG+AGG - chr5_3:6943931-6943950 Msa0795050:intron 35.0%
TATACAGCAATTGTGAGCTT+CGG - chr5_3:6944181-6944200 Msa0795050:intron 35.0%
!! AACTTCTTGCTTTTGTTCAG+GGG + chr5_3:6944215-6944234 None:intergenic 35.0%
!! CAACTTCTTGCTTTTGTTCA+GGG + chr5_3:6944216-6944235 None:intergenic 35.0%
!! TCAACTTCTTGCTTTTGTTC+AGG + chr5_3:6944217-6944236 None:intergenic 35.0%
AAGCAAGAAGTTGAAAAGCT+TGG - chr5_3:6944223-6944242 Msa0795050:intron 35.0%
AGAAGTTGAAAAGCTTGGAT+TGG - chr5_3:6944228-6944247 Msa0795050:intron 35.0%
CAACTATTTATGCTGCAAAG+GGG + chr5_3:6944395-6944414 None:intergenic 35.0%
CCAACTATTTATGCTGCAAA+GGG + chr5_3:6944396-6944415 None:intergenic 35.0%
ACCAACTATTTATGCTGCAA+AGG + chr5_3:6944397-6944416 None:intergenic 35.0%
TAAGGATGATATCAGGTCAA+TGG - chr5_3:6944526-6944545 Msa0795050:intron 35.0%
TTGGATATCAATACTCCCTT+GGG + chr5_3:6944816-6944835 None:intergenic 35.0%
ATTGGATATCAATACTCCCT+TGG + chr5_3:6944817-6944836 None:intergenic 35.0%
GAGGGTAATAATACTCTCAT+TGG + chr5_3:6944835-6944854 None:intergenic 35.0%
AGTATTATTACCCTCTTAGC+TGG - chr5_3:6944840-6944859 Msa0795050:intron 35.0%
GTATTATTACCCTCTTAGCT+GGG - chr5_3:6944841-6944860 Msa0795050:intron 35.0%
TATTATTACCCTCTTAGCTG+GGG - chr5_3:6944842-6944861 Msa0795050:intron 35.0%
TGATAAGTACACATCCTTCT+CGG + chr5_3:6945131-6945150 None:intergenic 35.0%
GTTGTTAATTGAAGATCTCG+GGG - chr5_3:6945385-6945404 Msa0795050:intron 35.0%
ATGCTCTTCTGATTGTTGTA+CGG - chr5_3:6945467-6945486 Msa0795050:intron 35.0%
AAATAGGTAAGAAATGTGGG+GGG + chr5_3:6945540-6945559 None:intergenic 35.0%
!!! TATTTTCTAGCTGGGAAAAG+GGG + chr5_3:6945576-6945595 None:intergenic 35.0%
!!! CTTATTTTCTAGCTGGGAAA+AGG + chr5_3:6945578-6945597 None:intergenic 35.0%
ACACAGAAAATTTCTTCTGG+AGG - chr5_3:6945633-6945652 Msa0795050:intron 35.0%
GGAATATTGCAATGCTTACT+GGG + chr5_3:6945838-6945857 None:intergenic 35.0%
TGGAATATTGCAATGCTTAC+TGG + chr5_3:6945839-6945858 None:intergenic 35.0%
AATACATTGCTGTCAAACTG+CGG + chr5_3:6945999-6946018 None:intergenic 35.0%
! AGCAATGTATTTTCTCCTCT+TGG - chr5_3:6946008-6946027 Msa0795050:intron 35.0%
TATTAGGTGAAGCAAGGTTT+AGG - chr5_3:6946051-6946070 Msa0795050:intron 35.0%
ATTAGGTGAAGCAAGGTTTA+GGG - chr5_3:6946052-6946071 Msa0795050:intron 35.0%
!!! AGTGTACGTCTTATTTTGTC+TGG - chr5_3:6946078-6946097 Msa0795050:intron 35.0%
TGCATGTGGAAAGTTACTTA+CGG - chr5_3:6946118-6946137 Msa0795050:intron 35.0%
! CTTATTGCATGGGTGAATTT+TGG + chr5_3:6946202-6946221 None:intergenic 35.0%
! CCAAGCATATCTAGTTCATT+TGG + chr5_3:6946557-6946576 None:intergenic 35.0%
CCAAATGAACTAGATATGCT+TGG - chr5_3:6946554-6946573 Msa0795050:intron 35.0%
!!! AAAAGGCGATACCTTGTTTT+CGG - chr5_3:6946679-6946698 Msa0795050:intron 35.0%
GAAAACACCAATAACCTGTA+TGG + chr5_3:6946757-6946776 None:intergenic 35.0%
TTGCGTGATTTATTCAACAG+GGG - chr5_3:6946853-6946872 Msa0795050:intron 35.0%
ATTTATTCAACAGGGGACAT+TGG - chr5_3:6946860-6946879 Msa0795050:intron 35.0%
! ATATGTTGCTGTTGAAAACC+TGG - chr5_3:6946955-6946974 Msa0795050:intron 35.0%
CTTGGCTATAAATATTCTCC+AGG + chr5_3:6946976-6946995 None:intergenic 35.0%
AGACATACAGATTCAACAGA+AGG + chr5_3:6947001-6947020 None:intergenic 35.0%
TGATCGTTTGTCTAATAGAC+AGG - chr5_3:6947488-6947507 Msa0795050:intron 35.0%
TCTACTACATGCAACAAGAA+TGG + chr5_3:6947515-6947534 None:intergenic 35.0%
TATTCTTCCTGTCTCAGATA+TGG - chr5_3:6947657-6947676 Msa0795050:intron 35.0%
ATTCTTCCTGTCTCAGATAT+GGG - chr5_3:6947658-6947677 Msa0795050:intron 35.0%
! GGTTTATGGAAACAGTTTTG+AGG - chr5_3:6947679-6947698 Msa0795050:intron 35.0%
GTTCCATATCAAATGGAACT+GGG + chr5_3:6948339-6948358 None:intergenic 35.0%
TCAGTTGCTCAAATACTATC+AGG - chr5_3:6948396-6948415 Msa0795050:intron 35.0%
TCAGTGGAAAGAAAATATCC+GGG + chr5_3:6948536-6948555 None:intergenic 35.0%
CTCAGTGGAAAGAAAATATC+CGG + chr5_3:6948537-6948556 None:intergenic 35.0%
TAGTTACTAAACACTCGACA+TGG - chr5_3:6948644-6948663 Msa0795050:intron 35.0%
! ACGTTTCAAAGCCTGTTTTA+TGG - chr5_3:6948819-6948838 Msa0795050:intron 35.0%
ATGTACAGACAGTAACCAAA+AGG + chr5_3:6949038-6949057 None:intergenic 35.0%
TTTGCAACGAATATTGTCAG+AGG + chr5_3:6949147-6949166 None:intergenic 35.0%
! TTGTTAATTTTGCCCAGGAA+TGG + chr5_3:6949195-6949214 None:intergenic 35.0%
TTCCTGGGCAAAATTAACAA+TGG - chr5_3:6949195-6949214 Msa0795050:CDS 35.0%
CATAATCCACTCTGCAGAAT+TGG + chr5_3:6934401-6934420 None:intergenic 40.0%
AGAGATTGGGGAACAAAACA+GGG + chr5_3:6934493-6934512 None:intergenic 40.0%
AAAACAAGACCTTCAATGGG+AGG + chr5_3:6934540-6934559 None:intergenic 40.0%
CCACAAAACAAGACCTTCAA+TGG + chr5_3:6934544-6934563 None:intergenic 40.0%
!!! CCATTGAAGGTCTTGTTTTG+TGG - chr5_3:6934541-6934560 Msa0795050:three_prime_UTR 40.0%
AATCACAATGCCTCACAGAT+GGG + chr5_3:6934607-6934626 None:intergenic 40.0%
AAATCACAATGCCTCACAGA+TGG + chr5_3:6934608-6934627 None:intergenic 40.0%
! CCAAATGAGAGTGCATAACA+TGG + chr5_3:6934683-6934702 None:intergenic 40.0%
CCATGTTATGCACTCTCATT+TGG - chr5_3:6934680-6934699 Msa0795050:CDS 40.0%
GGGGACTTAAATCGGAAATA+AGG + chr5_3:6934708-6934727 None:intergenic 40.0%
GTTCAAGAGGAACAACTCTT+AGG + chr5_3:6934741-6934760 None:intergenic 40.0%
TAGAACTTCGAAGTGCAAGA+TGG + chr5_3:6934768-6934787 None:intergenic 40.0%
AGGGAAAAAGTTGGACACAT+TGG + chr5_3:6934820-6934839 None:intergenic 40.0%
AATCTTCGAGGTGCAAAGTT+TGG + chr5_3:6934993-6935012 None:intergenic 40.0%
AGAGTTGGAGAAAATCTTCG+AGG + chr5_3:6935005-6935024 None:intergenic 40.0%
!! CATTGAGTTGATTGCAGAGT+TGG + chr5_3:6935020-6935039 None:intergenic 40.0%
CAACTCTGCAATCAACTCAA+TGG - chr5_3:6935018-6935037 Msa0795050:intron 40.0%
ATGGAATCTTTCCTTCTCCA+AGG - chr5_3:6935037-6935056 Msa0795050:intron 40.0%
AACTTTCATCAATCGGATCC+TGG + chr5_3:6935084-6935103 None:intergenic 40.0%
AGTTACCCTCTCATAGTTGT+CGG + chr5_3:6935221-6935240 None:intergenic 40.0%
TGAGAAAACCTAGAGCTAGA+CGG + chr5_3:6935253-6935272 None:intergenic 40.0%
GTAACTAAATGGACCGTGAT+GGG + chr5_3:6935374-6935393 None:intergenic 40.0%
TGTAACTAAATGGACCGTGA+TGG + chr5_3:6935375-6935394 None:intergenic 40.0%
TAATCCAACAATCTCCCACT+TGG - chr5_3:6935517-6935536 Msa0795050:intron 40.0%
CTGCAGAAATTGAATCCGAT+AGG - chr5_3:6935657-6935676 Msa0795050:intron 40.0%
AACTATCATTCTCCACCAAG+TGG + chr5_3:6937419-6937438 None:intergenic 40.0%
TTAAGTAACGTCACACCGAT+GGG - chr5_3:6937628-6937647 Msa0795050:intron 40.0%
ATCCGTCACTCACATAACAA+AGG - chr5_3:6937655-6937674 Msa0795050:intron 40.0%
TCCGTCACTCACATAACAAA+GGG - chr5_3:6937656-6937675 Msa0795050:intron 40.0%
! TCCCTTTGTTATGTGAGTGA+CGG + chr5_3:6937660-6937679 None:intergenic 40.0%
TGGTAACAGTCATACCCTAT+CGG + chr5_3:6937986-6938005 None:intergenic 40.0%
TGCATAATTGTACCCACGAT+AGG - chr5_3:6938034-6938053 Msa0795050:intron 40.0%
GTGTTAGGAATCTTCACACA+AGG - chr5_3:6939931-6939950 Msa0795050:intron 40.0%
TATCGAAAGAAAATGGGCCT+TGG - chr5_3:6940074-6940093 Msa0795050:intron 40.0%
GGCCTTGGATCATTGAAAAT+TGG - chr5_3:6940089-6940108 Msa0795050:intron 40.0%
TGGTTCCGGATCAGTAATAA+AGG - chr5_3:6940109-6940128 Msa0795050:intron 40.0%
AGTAATAAAGGAAATCGGGG+CGG - chr5_3:6940121-6940140 Msa0795050:intron 40.0%
! AAATAAGACCCGACCTGTTT+TGG - chr5_3:6940151-6940170 Msa0795050:intron 40.0%
! AATAAGACCCGACCTGTTTT+GGG - chr5_3:6940152-6940171 Msa0795050:intron 40.0%
! CATTCGTTTGTTAGACCGTA+CGG - chr5_3:6940205-6940224 Msa0795050:intron 40.0%
TTCAAAAGGCTCATTCCTAC+GGG + chr5_3:6940431-6940450 None:intergenic 40.0%
AGTTACCCTCTCATAGTTGT+CGG + chr5_3:6935221-6935240 None:intergenic 40.0%
TGAGAAAACCTAGAGCTAGA+CGG + chr5_3:6935253-6935272 None:intergenic 40.0%
CTAAATGGTCCAACCTATCA+CGG - chr5_3:6940919-6940938 Msa0795050:intron 40.0%
GTAACTAAATGGACCGTGAT+AGG + chr5_3:6935374-6935393 None:intergenic 40.0%
! AGAAGAGTACAAATCGGTGT+TGG + chr5_3:6941085-6941104 None:intergenic 40.0%
! ATTCTAGGAGAGGTAAGTGA+AGG + chr5_3:6941173-6941192 None:intergenic 40.0%
AGCATGTTTGTACACAGTGA+TGG - chr5_3:6941633-6941652 Msa0795050:intron 40.0%
TCGCATAAATTGGCAAGCTT+AGG + chr5_3:6941777-6941796 None:intergenic 40.0%
! AGGTATAAATGTAGGGGTGT+GGG + chr5_3:6942130-6942149 None:intergenic 40.0%
AAGGTATAAATGTAGGGGTG+TGG + chr5_3:6942131-6942150 None:intergenic 40.0%
! GGGTGAAGGTATAAATGTAG+GGG + chr5_3:6942136-6942155 None:intergenic 40.0%
! GGGGTGAAGGTATAAATGTA+GGG + chr5_3:6942137-6942156 None:intergenic 40.0%
! TGGGGTGAAGGTATAAATGT+AGG + chr5_3:6942138-6942157 None:intergenic 40.0%
TGTGTTAAATGTTGGGGTGA+AGG + chr5_3:6942150-6942169 None:intergenic 40.0%
CGGAAACGATTAAGAGAACA+AGG + chr5_3:6942333-6942352 None:intergenic 40.0%
ATTCCGGTAACAAGGAAAGA+AGG + chr5_3:6942377-6942396 None:intergenic 40.0%
AATCAAGGATTCCGGTAACA+AGG + chr5_3:6942385-6942404 None:intergenic 40.0%
GTTACCGGAATCCTTGATTA+AGG - chr5_3:6942386-6942405 Msa0795050:intron 40.0%
!!! TGCTAGGTTTTTTGGGTTAG+TGG - chr5_3:6942411-6942430 Msa0795050:intron 40.0%
! AGCTTTGGTGAACATGATTC+CGG + chr5_3:6942520-6942539 None:intergenic 40.0%
GGAAAACAATCGGAAAGCTT+TGG + chr5_3:6942535-6942554 None:intergenic 40.0%
!! CTATTCCGGGAAGCATTTAT+CGG + chr5_3:6942579-6942598 None:intergenic 40.0%
AAATGCTTCCCGGAATAGTT+TGG - chr5_3:6942581-6942600 Msa0795050:intron 40.0%
AATGCTTCCCGGAATAGTTT+GGG - chr5_3:6942582-6942601 Msa0795050:intron 40.0%
ATACTTCCCCAAACTATTCC+GGG + chr5_3:6942592-6942611 None:intergenic 40.0%
AGACATAAGGATGCATGAAC+CGG + chr5_3:6942616-6942635 None:intergenic 40.0%
! GCTAATTTGTGACCAAGTGA+TGG - chr5_3:6942937-6942956 Msa0795050:intron 40.0%
GGCGTTCCGAATATATATAC+CGG + chr5_3:6943006-6943025 None:intergenic 40.0%
CGGAAATACGTACTTAGAAG+TGG - chr5_3:6943115-6943134 Msa0795050:intron 40.0%
GGGGTGAAATTACATGTGTT+GGG - chr5_3:6943244-6943263 Msa0795050:intron 40.0%
GGGTGAAATTACATGTGTTG+GGG - chr5_3:6943245-6943264 Msa0795050:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr5_3:6943324-6943343 None:intergenic 40.0%
AGCCAATTGCACACAGATTA+AGG + chr5_3:6943553-6943572 None:intergenic 40.0%
! AAAGGGAGTACGGAAATTAG+TGG - chr5_3:6943595-6943614 Msa0795050:intron 40.0%
! AAGGGAGTACGGAAATTAGT+GGG - chr5_3:6943596-6943615 Msa0795050:intron 40.0%
AATTAGTGGGGCTTACACTT+TGG - chr5_3:6943609-6943628 Msa0795050:intron 40.0%
TTATCGGGTCAAATCCACAT+GGG + chr5_3:6943654-6943673 None:intergenic 40.0%
TTTATCGGGTCAAATCCACA+TGG + chr5_3:6943655-6943674 None:intergenic 40.0%
GGATTTGACCCGATAAAAAG+TGG - chr5_3:6943658-6943677 Msa0795050:intron 40.0%
CCCTTTGCAGCATAAATAGT+TGG - chr5_3:6944393-6944412 Msa0795050:intron 40.0%
CTATTACTTGGACTAACTGC+CGG + chr5_3:6944445-6944464 None:intergenic 40.0%
GCAGTTAGTCCAAGTAATAG+TGG - chr5_3:6944445-6944464 Msa0795050:intron 40.0%
CCACACATTCCACTATTACT+TGG + chr5_3:6944457-6944476 None:intergenic 40.0%
! CCAAGTAATAGTGGAATGTG+TGG - chr5_3:6944454-6944473 Msa0795050:intron 40.0%
TGCTAGCCATACTTGTAATG+AGG + chr5_3:6944630-6944649 None:intergenic 40.0%
ATGTATACTAGCGGAACTAC+TGG - chr5_3:6944786-6944805 Msa0795050:intron 40.0%
TGGATATCAATACTCCCTTG+GGG + chr5_3:6944815-6944834 None:intergenic 40.0%
TTGTTTACAGTTGACCGAGA+AGG - chr5_3:6945114-6945133 Msa0795050:intron 40.0%
TCTCGCACATACCTTTGATA+GGG - chr5_3:6945159-6945178 Msa0795050:intron 40.0%
TACCTTTGATAGGGTCATTG+AGG - chr5_3:6945168-6945187 Msa0795050:intron 40.0%
GAGGAGACATTTATATGGCA+TGG - chr5_3:6945187-6945206 Msa0795050:intron 40.0%
GAGACATTTATATGGCATGG+TGG - chr5_3:6945190-6945209 Msa0795050:intron 40.0%
ATATGGCATGGTGGTTCAAT+AGG - chr5_3:6945199-6945218 Msa0795050:intron 40.0%
CACCCCAACAAGTCAAAAAT+TGG - chr5_3:6945300-6945319 Msa0795050:intron 40.0%
!! CATAGTGCAAATGATGGACA+AGG + chr5_3:6945350-6945369 None:intergenic 40.0%
CTTGTCCATCATTTGCACTA+TGG - chr5_3:6945348-6945367 Msa0795050:intron 40.0%
TACACTCTATCAAGTACACG+AGG + chr5_3:6945440-6945459 None:intergenic 40.0%
GTACTTGATAGAGTGTACTC+AGG - chr5_3:6945443-6945462 Msa0795050:intron 40.0%
GATTCTCAACTTCTGTATGC+AGG - chr5_3:6945606-6945625 Msa0795050:intron 40.0%
ATTTCTGCGTGCTTTGACAA+AGG + chr5_3:6945756-6945775 None:intergenic 40.0%
! TTTTCTCCTCTTGGCTGATT+TGG - chr5_3:6946017-6946036 Msa0795050:intron 40.0%
TTAGGTGAAGCAAGGTTTAG+GGG - chr5_3:6946053-6946072 Msa0795050:intron 40.0%
CTTTCCACATGCAAAGATAG+AGG + chr5_3:6946111-6946130 None:intergenic 40.0%
GCATGTGGAAAGTTACTTAC+GGG - chr5_3:6946119-6946138 Msa0795050:intron 40.0%
AGAGCATACCATATCCTTGT+AGG + chr5_3:6946164-6946183 None:intergenic 40.0%
ACTAGATATGCTTGGAACAG+TGG - chr5_3:6946562-6946581 Msa0795050:intron 40.0%
CTAGATATGCTTGGAACAGT+GGG - chr5_3:6946563-6946582 Msa0795050:intron 40.0%
CTGGAATCTGTTCCTGAAAT+GGG - chr5_3:6946614-6946633 Msa0795050:intron 40.0%
!!! AAAGGCGATACCTTGTTTTC+GGG - chr5_3:6946680-6946699 Msa0795050:intron 40.0%
TTTGTAGTACCCCGAAAACA+AGG + chr5_3:6946693-6946712 None:intergenic 40.0%
! ACAAAAGAGGTTCTGGTTGA+TGG - chr5_3:6946725-6946744 Msa0795050:intron 40.0%
GATGGTTCCATACAGGTTAT+TGG - chr5_3:6946747-6946766 Msa0795050:intron 40.0%
CAGATTCAACAGAAGGAACT+TGG + chr5_3:6946994-6947013 None:intergenic 40.0%
AGCTAGGACACTAAAACCAT+CGG + chr5_3:6947035-6947054 None:intergenic 40.0%
AAATATCCCAGCCTAGAGAT+AGG + chr5_3:6947276-6947295 None:intergenic 40.0%
ACAACAGCACATAGGACTAT+GGG + chr5_3:6947407-6947426 None:intergenic 40.0%
GTTGTGACATCCATATGTGT+CGG - chr5_3:6947547-6947566 Msa0795050:intron 40.0%
TGTTTATGAGCCGACACATA+TGG + chr5_3:6947560-6947579 None:intergenic 40.0%
! CATAAACCCATATCTGAGAC+AGG + chr5_3:6947667-6947686 None:intergenic 40.0%
CTGTCTCAGATATGGGTTTA+TGG - chr5_3:6947665-6947684 Msa0795050:intron 40.0%
GTTAACAACAGCAACAAGGA+AGG + chr5_3:6947705-6947724 None:intergenic 40.0%
CAAACCAGCACTTGAACATT+GGG - chr5_3:6947730-6947749 Msa0795050:intron 40.0%
GAACATTGGGCAGAAGAAAA+TGG - chr5_3:6947743-6947762 Msa0795050:intron 40.0%
ATTCTCTCTGTGGAGATTCT+AGG - chr5_3:6947783-6947802 Msa0795050:intron 40.0%
TTCTCTCTGTGGAGATTCTA+GGG - chr5_3:6947784-6947803 Msa0795050:intron 40.0%
TGACCCAGTTCCATTTGATA+TGG - chr5_3:6948333-6948352 Msa0795050:intron 40.0%
CGTTCCATATCAAATGGAAC+TGG + chr5_3:6948340-6948359 None:intergenic 40.0%
AGGTCACGTTCCATATCAAA+TGG + chr5_3:6948346-6948365 None:intergenic 40.0%
TCTTGTATGTCGGAGTGATA+AGG + chr5_3:6948366-6948385 None:intergenic 40.0%
AGCCTCTTCTTCTTGTATGT+CGG + chr5_3:6948376-6948395 None:intergenic 40.0%
! GTTTTCAGTTATACGCTCAG+TGG + chr5_3:6948552-6948571 None:intergenic 40.0%
CTGAGCGTATAACTGAAAAC+AGG - chr5_3:6948552-6948571 Msa0795050:intron 40.0%
AAGTGCAGTTGAAAGTGAAG+TGG + chr5_3:6948783-6948802 None:intergenic 40.0%
CTATTTGTGTGCTCAGAATG+TGG - chr5_3:6948884-6948903 Msa0795050:intron 40.0%
GTCGATGACATGTACAAAAG+TGG - chr5_3:6948906-6948925 Msa0795050:intron 40.0%
CAACTCCAAATGCATTTCTC+AGG + chr5_3:6948946-6948965 None:intergenic 40.0%
! CTGAGAAATGCATTTGGAGT+TGG - chr5_3:6948944-6948963 Msa0795050:intron 40.0%
GTATCTTTCACAGTTGAGTG+AGG + chr5_3:6949090-6949109 None:intergenic 40.0%
! CACCATTGTTAATTTTGCCC+AGG + chr5_3:6949200-6949219 None:intergenic 40.0%
GGTTTGCAGGGTGTAAAATG+TGG - chr5_3:6934364-6934383 Msa0795050:three_prime_UTR 45.0%
!! TGCAGAGTGGATTATGAGCA+TGG - chr5_3:6934405-6934424 Msa0795050:three_prime_UTR 45.0%
!! AGAGTGGATTATGAGCATGG+AGG - chr5_3:6934408-6934427 Msa0795050:three_prime_UTR 45.0%
GAGAGATTGGGGAACAAAAC+AGG + chr5_3:6934494-6934513 None:intergenic 45.0%
TGTGGTTTCAATCCCTTACG+AGG - chr5_3:6934559-6934578 Msa0795050:three_prime_UTR 45.0%
AATTTCCTGCTGCCTCGTAA+GGG + chr5_3:6934574-6934593 None:intergenic 45.0%
TAATTTCCTGCTGCCTCGTA+AGG + chr5_3:6934575-6934594 None:intergenic 45.0%
TTACGAGGCAGCAGGAAATT+AGG - chr5_3:6934574-6934593 Msa0795050:three_prime_UTR 45.0%
AGGTTTCAATCCCATCTGTG+AGG - chr5_3:6934594-6934613 Msa0795050:three_prime_UTR 45.0%
! GTTGGACACATTGGATTGGA+CGG + chr5_3:6934811-6934830 None:intergenic 45.0%
GAGGCTTTGCAACCAGTTAT+AGG - chr5_3:6934878-6934897 Msa0795050:intron 45.0%
TTCATCAATCGGATCCTGGA+AGG + chr5_3:6935080-6935099 None:intergenic 45.0%
CTAAATGGTCCAACCCATCA+CGG - chr5_3:6935358-6935377 Msa0795050:intron 45.0%
TCATCCAAGTGGGAGATTGT+TGG + chr5_3:6935524-6935543 None:intergenic 45.0%
!! ACGTGATGGACATACCCTAT+CGG + chr5_3:6937488-6937507 None:intergenic 45.0%
GTTAAGTAACGTCACACCGA+TGG - chr5_3:6937627-6937646 Msa0795050:intron 45.0%
TAAGTAACGTCACACCGATG+GGG - chr5_3:6937629-6937648 Msa0795050:intron 45.0%
! ATAAGACCCGACCTGTTTTG+GGG - chr5_3:6940153-6940172 Msa0795050:intron 45.0%
TGTTAGACCGTACGGATCAA+AGG - chr5_3:6940213-6940232 Msa0795050:intron 45.0%
ATAGTTGTCGGCGTTGTCTA+CGG + chr5_3:6940770-6940789 None:intergenic 45.0%
CTAAATGGACCGTGATAGGT+TGG + chr5_3:6940931-6940950 None:intergenic 45.0%
TGGTGTAGGAACCGGTTAAT+AGG + chr5_3:6941130-6941149 None:intergenic 45.0%
CAGATGTATGGTGTAGGAAC+CGG + chr5_3:6941138-6941157 None:intergenic 45.0%
!! TGCTTTCATGGTGCTGTTAG+TGG - chr5_3:6941456-6941475 Msa0795050:intron 45.0%
TTATAGAAGGTGACCAGGGA+TGG + chr5_3:6941482-6941501 None:intergenic 45.0%
CGAGTGGAAGAAGCTAGTAA+AGG + chr5_3:6941509-6941528 None:intergenic 45.0%
GATGGTGCTTTGACTGCAAT+TGG - chr5_3:6941651-6941670 Msa0795050:intron 45.0%
CAACTGACAGATTTCGGTGA+AGG + chr5_3:6942066-6942085 None:intergenic 45.0%
! GGTATAAATGTAGGGGTGTG+GGG + chr5_3:6942129-6942148 None:intergenic 45.0%
GTGTGGGGTGAAAAGTGAAA+GGG + chr5_3:6942213-6942232 None:intergenic 45.0%
AGTGTGGGGTGAAAAGTGAA+AGG + chr5_3:6942214-6942233 None:intergenic 45.0%
! CTTTTCACCCCACACTTTTC+TGG - chr5_3:6942218-6942237 Msa0795050:intron 45.0%
GAGCCTTCTTTCCTTGTTAC+CGG - chr5_3:6942371-6942390 Msa0795050:intron 45.0%
CAATTGACAACGACGATGTG+AGG - chr5_3:6942447-6942466 Msa0795050:intron 45.0%
!!! AAGGCTTCTGACGCTTTTTC+TGG + chr5_3:6942556-6942575 None:intergenic 45.0%
ATGCTTCCCGGAATAGTTTG+GGG - chr5_3:6942583-6942602 Msa0795050:intron 45.0%
ACAAGGAAGTAGCCAAGTGA+TGG - chr5_3:6942906-6942925 Msa0795050:intron 45.0%
GGGTGAACTCACACTGAATT+AGG - chr5_3:6943137-6943156 Msa0795050:intron 45.0%
CGGGGTGAAATTACATGTGT+TGG - chr5_3:6943243-6943262 Msa0795050:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr5_3:6943325-6943344 None:intergenic 45.0%
! AGGGAGTACGGAAATTAGTG+GGG - chr5_3:6943597-6943616 Msa0795050:intron 45.0%
AGTTATACATGGGACCCATG+TGG - chr5_3:6943637-6943656 Msa0795050:intron 45.0%
ATGCAATTGAGACCTCTGCA+TGG + chr5_3:6943907-6943926 None:intergenic 45.0%
AGCAATTGTGAGCTTCGGAA+AGG - chr5_3:6944186-6944205 Msa0795050:intron 45.0%
AAACTCTGACTTTCACCCTG+TGG + chr5_3:6944726-6944745 None:intergenic 45.0%
! CTATCAAAGGTATGTGCGAG+AGG + chr5_3:6945160-6945179 None:intergenic 45.0%
CTCTCGCACATACCTTTGAT+AGG - chr5_3:6945158-6945177 Msa0795050:intron 45.0%
CTCCTCAATGACCCTATCAA+AGG + chr5_3:6945173-6945192 None:intergenic 45.0%
ATGGTGGTTCAATAGGCTTC+TGG - chr5_3:6945206-6945225 Msa0795050:intron 45.0%
TGCAGCCATAGTGCAAATGA+TGG + chr5_3:6945356-6945375 None:intergenic 45.0%
ATCATTTGCACTATGGCTGC+AGG - chr5_3:6945355-6945374 Msa0795050:intron 45.0%
GGTACCGCACAGAAAAAAGT+TGG + chr5_3:6945419-6945438 None:intergenic 45.0%
GCAAAACCAAATCAGCCAAG+AGG + chr5_3:6946026-6946045 None:intergenic 45.0%
TAGGTGAAGCAAGGTTTAGG+GGG - chr5_3:6946054-6946073 Msa0795050:intron 45.0%
AGCACCTCTATCTTTGCATG+TGG - chr5_3:6946104-6946123 Msa0795050:intron 45.0%
TGTGGAAAGTTACTTACGGG+TGG - chr5_3:6946122-6946141 Msa0795050:intron 45.0%
ACTTGTGCTCATGTCCTACA+AGG - chr5_3:6946147-6946166 Msa0795050:intron 45.0%
GCTCATGTCCTACAAGGATA+TGG - chr5_3:6946153-6946172 Msa0795050:intron 45.0%
AGGTCTGACTGAAACTTGTG+CGG - chr5_3:6946514-6946533 Msa0795050:intron 45.0%
CCATTTCAGGAACAGATTCC+AGG + chr5_3:6946616-6946635 None:intergenic 45.0%
CCTGGAATCTGTTCCTGAAA+TGG - chr5_3:6946613-6946632 Msa0795050:intron 45.0%
!!! AAGGCGATACCTTGTTTTCG+GGG - chr5_3:6946681-6946700 Msa0795050:intron 45.0%
ACGTGAAGACCTCACAAAAG+AGG - chr5_3:6946712-6946731 Msa0795050:intron 45.0%
AGACCTCACAAAAGAGGTTC+TGG - chr5_3:6946718-6946737 Msa0795050:intron 45.0%
! CAACCAGAACCTCTTTTGTG+AGG + chr5_3:6946724-6946743 None:intergenic 45.0%
!! AAGAGGTTCTGGTTGATGGA+TGG - chr5_3:6946729-6946748 Msa0795050:intron 45.0%
! GTTGATGGATGGTTCCATAC+AGG - chr5_3:6946740-6946759 Msa0795050:intron 45.0%
ATTGGAGAGTGGCAACCTAA+TGG - chr5_3:6946878-6946897 Msa0795050:intron 45.0%
GGACACTAAAACCATCGGAA+GGG + chr5_3:6947030-6947049 None:intergenic 45.0%
AGGACACTAAAACCATCGGA+AGG + chr5_3:6947031-6947050 None:intergenic 45.0%
TATAGAAACCGTGCCCTTGA+TGG - chr5_3:6947146-6947165 Msa0795050:intron 45.0%
ATAGAAACCGTGCCCTTGAT+GGG - chr5_3:6947147-6947166 Msa0795050:intron 45.0%
ATTTGTCCCAAGCCCATCAA+GGG + chr5_3:6947162-6947181 None:intergenic 45.0%
!! TTGATGGGCTTGGGACAAAT+GGG - chr5_3:6947162-6947181 Msa0795050:intron 45.0%
AGACTGATACGCCTATCTCT+AGG - chr5_3:6947262-6947281 Msa0795050:intron 45.0%
CACAACAGCACATAGGACTA+TGG + chr5_3:6947408-6947427 None:intergenic 45.0%
ATCTGTGCACAACAGCACAT+AGG + chr5_3:6947415-6947434 None:intergenic 45.0%
GCACAGATTGTGGTCCATAT+TGG - chr5_3:6947427-6947446 Msa0795050:intron 45.0%
TGGGGTTAACAACAGCAACA+AGG + chr5_3:6947709-6947728 None:intergenic 45.0%
!! TGTTCAAGTGCTGGTTTGCT+GGG + chr5_3:6947728-6947747 None:intergenic 45.0%
!! ATGTTCAAGTGCTGGTTTGC+TGG + chr5_3:6947729-6947748 None:intergenic 45.0%
GCAAACCAGCACTTGAACAT+TGG - chr5_3:6947729-6947748 Msa0795050:intron 45.0%
GTGGACTTCAATTCTCTCTG+TGG - chr5_3:6947773-6947792 Msa0795050:intron 45.0%
CTTGACGAGCTCTCAAAGAT+TGG - chr5_3:6947821-6947840 Msa0795050:intron 45.0%
CGAGCTCTCAAAGATTGGAA+AGG - chr5_3:6947826-6947845 Msa0795050:intron 45.0%
CAAATGGAACTGGGTCAAGA+TGG + chr5_3:6948330-6948349 None:intergenic 45.0%
CTCCGACATACAAGAAGAAG+AGG - chr5_3:6948371-6948390 Msa0795050:intron 45.0%
AAATGCATTTCTCAGGCACG+GGG + chr5_3:6948939-6948958 None:intergenic 45.0%
CAAATGCATTTCTCAGGCAC+GGG + chr5_3:6948940-6948959 None:intergenic 45.0%
CCAAATGCATTTCTCAGGCA+CGG + chr5_3:6948941-6948960 None:intergenic 45.0%
!! ATTATTTAATTAATCAATTA+TGG + chr5_3:6935497-6935516 None:intergenic 5.0%
!! AAATATAAATTAATTATACT+TGG - chr5_3:6939289-6939308 Msa0795050:intron 5.0%
!! AATATTATACAATATTATTT+GGG + chr5_3:6939993-6940012 None:intergenic 5.0%
!! AAATATTATACAATATTATT+TGG + chr5_3:6939994-6940013 None:intergenic 5.0%
!! ATTATTTAATTAATCAATTA+TGG + chr5_3:6935497-6935516 None:intergenic 5.0%
!!! TTTTTTTTTTATCAAATATA+AGG + chr5_3:6941828-6941847 None:intergenic 5.0%
! ATGGTGCCAATTCTGCAGAG+TGG - chr5_3:6934392-6934411 Msa0795050:three_prime_UTR 50.0%
! ATGGGAGGCATGAGTCAATC+AGG + chr5_3:6934525-6934544 None:intergenic 50.0%
TGACTCATGCCTCCCATTGA+AGG - chr5_3:6934528-6934547 Msa0795050:three_prime_UTR 50.0%
TGGATGACGTCTCGACTCTT+GGG + chr5_3:6934663-6934682 None:intergenic 50.0%
ATGGATGACGTCTCGACTCT+TGG + chr5_3:6934664-6934683 None:intergenic 50.0%
GCAAGATGGAGTCGTTCAAG+AGG + chr5_3:6934754-6934773 None:intergenic 50.0%
! ATTGGATTGGACGGACTCAG+CGG + chr5_3:6934802-6934821 None:intergenic 50.0%
CAAAGTTGGAGCCTTGGAGA+AGG + chr5_3:6935051-6935070 None:intergenic 50.0%
TGTGGACAAAGTTGGAGCCT+TGG + chr5_3:6935057-6935076 None:intergenic 50.0%
! CTGGAAGGTGTGGACAAAGT+TGG + chr5_3:6935065-6935084 None:intergenic 50.0%
CAACTTTGTCCACACCTTCC+AGG - chr5_3:6935063-6935082 Msa0795050:intron 50.0%
ATAGTTGTCGGCGTTGTCGA+CGG + chr5_3:6935209-6935228 None:intergenic 50.0%
ACAACGCCGACAACTATGAG+AGG - chr5_3:6935212-6935231 Msa0795050:CDS 50.0%
CAACGCCGACAACTATGAGA+GGG - chr5_3:6935213-6935232 Msa0795050:CDS 50.0%
CCTAGAGCTAGACGGAATGA+GGG + chr5_3:6935245-6935264 None:intergenic 50.0%
ACCTAGAGCTAGACGGAATG+AGG + chr5_3:6935246-6935265 None:intergenic 50.0%
!! CTAAATGGACCGTGATGGGT+TGG + chr5_3:6935370-6935389 None:intergenic 50.0%
!! GAGTGACGGATATACCCCAT+CGG + chr5_3:6937646-6937665 None:intergenic 50.0%
GATGAATGTCACACTCTGCG+AGG + chr5_3:6938565-6938584 None:intergenic 50.0%
!! TAAGACCCGACCTGTTTTGG+GGG - chr5_3:6940154-6940173 Msa0795050:intron 50.0%
ACAACGCCGACAACTATGAG+AGG - chr5_3:6935212-6935231 Msa0795050:CDS 50.0%
CAACGCCGACAACTATGAGA+GGG - chr5_3:6935213-6935232 Msa0795050:CDS 50.0%
CCTAGAGCTAGACGGAATGA+GGG + chr5_3:6935245-6935264 None:intergenic 50.0%
ACCTAGAGCTAGACGGAATG+AGG + chr5_3:6935246-6935265 None:intergenic 50.0%
TTGCAGGCTTGCAATGCTCA+TGG - chr5_3:6941562-6941581 Msa0795050:intron 50.0%
TGGCGTCGTGAATCGTTAAC+CGG - chr5_3:6942498-6942517 Msa0795050:intron 50.0%
GCCTTCCGATAAATGCTTCC+CGG - chr5_3:6942571-6942590 Msa0795050:intron 50.0%
!! TCCGGGAAGCATTTATCGGA+AGG + chr5_3:6942575-6942594 None:intergenic 50.0%
GTATCACTATCTCGGTCCAC+CGG - chr5_3:6944423-6944442 Msa0795050:intron 50.0%
TTACTTGGACTAACTGCCGG+TGG + chr5_3:6944442-6944461 None:intergenic 50.0%
! CAAAGGTATGTGCGAGAGGA+AGG + chr5_3:6945156-6945175 None:intergenic 50.0%
GGGTGGCAGCTCAGAAAAAT+AGG + chr5_3:6945556-6945575 None:intergenic 50.0%
!! TTTCTAGCTGGGAAAAGGGG+TGG + chr5_3:6945573-6945592 None:intergenic 50.0%
GAAGTGGAGATGCTACTGCA+TGG + chr5_3:6945919-6945938 None:intergenic 50.0%
GGTCTGACTGAAACTTGTGC+GGG - chr5_3:6946515-6946534 Msa0795050:intron 50.0%
GCATCCACATTTGGTACAGG+AGG + chr5_3:6946590-6946609 None:intergenic 50.0%
CACGCATCCACATTTGGTAC+AGG + chr5_3:6946593-6946612 None:intergenic 50.0%
!! AGGGCATCGTAACCCATTTC+AGG + chr5_3:6946629-6946648 None:intergenic 50.0%
! TCCTCTTGGTGTGCTTGCAA+GGG + chr5_3:6946648-6946667 None:intergenic 50.0%
CATTTGTCCCAAGCCCATCA+AGG + chr5_3:6947163-6947182 None:intergenic 50.0%
!! CTTGATGGGCTTGGGACAAA+TGG - chr5_3:6947161-6947180 Msa0795050:intron 50.0%
!! TGATGGGCTTGGGACAAATG+GGG - chr5_3:6947163-6947182 Msa0795050:intron 50.0%
TGATACGCCTATCTCTAGGC+TGG - chr5_3:6947266-6947285 Msa0795050:intron 50.0%
GATACGCCTATCTCTAGGCT+GGG - chr5_3:6947267-6947286 Msa0795050:intron 50.0%
GGGCAACATACACATGCTAC+TGG + chr5_3:6947387-6947406 None:intergenic 50.0%
! GTGCTGTTGTGCACAGATTG+TGG - chr5_3:6947417-6947436 Msa0795050:intron 50.0%
!! GTTCAAGTGCTGGTTTGCTG+GGG + chr5_3:6947727-6947746 None:intergenic 50.0%
TCTGCCCAATGTTCAAGTGC+TGG + chr5_3:6947737-6947756 None:intergenic 50.0%
CCGTGCCTGAGAAATGCATT+TGG - chr5_3:6948938-6948957 Msa0795050:intron 50.0%
AGGCGGCAAGAGAGAGATTG+GGG + chr5_3:6934505-6934524 None:intergenic 55.0%
CAGGCGGCAAGAGAGAGATT+GGG + chr5_3:6934506-6934525 None:intergenic 55.0%
TCAGGCGGCAAGAGAGAGAT+TGG + chr5_3:6934507-6934526 None:intergenic 55.0%
! GGAGGCATGAGTCAATCAGG+CGG + chr5_3:6934522-6934541 None:intergenic 55.0%
TCAATCCCTTACGAGGCAGC+AGG - chr5_3:6934566-6934585 Msa0795050:three_prime_UTR 55.0%
GGATGACGTCTCGACTCTTG+GGG + chr5_3:6934662-6934681 None:intergenic 55.0%
CAATCGGATCCTGGAAGGTG+TGG + chr5_3:6935075-6935094 None:intergenic 55.0%
!! CCCTCATTCCGTCTAGCTCT+AGG - chr5_3:6935242-6935261 Msa0795050:CDS 55.0%
ATAGCTAAACGGCTGAGGGC+AGG - chr5_3:6935316-6935335 Msa0795050:intron 55.0%
TAGCTAAACGGCTGAGGGCA+GGG - chr5_3:6935317-6935336 Msa0795050:intron 55.0%
TGAGGGCAGGGACCTATCAT+TGG - chr5_3:6935329-6935348 Msa0795050:intron 55.0%
GAGGGCAGGGACCTATCATT+GGG - chr5_3:6935330-6935349 Msa0795050:intron 55.0%
AAAGGAAATCGGGGCGGAAC+AGG - chr5_3:6940127-6940146 Msa0795050:intron 55.0%
!! CCCTCATTCCGTCTAGCTCT+AGG - chr5_3:6935242-6935261 Msa0795050:CDS 55.0%
ATAGCTAAACGGCTGAGGGC+AGG - chr5_3:6935316-6935335 Msa0795050:intron 55.0%
TAGCTAAACGGCTGAGGGCA+GGG - chr5_3:6935317-6935336 Msa0795050:intron 55.0%
TGAGGGCAGGGACCTATCAT+TGG - chr5_3:6935329-6935348 Msa0795050:intron 55.0%
GAGGGCAGGGACCTATCATT+GGG - chr5_3:6935330-6935349 Msa0795050:intron 55.0%
CGACGATGTGAGGACGATTC+TGG - chr5_3:6942457-6942476 Msa0795050:intron 55.0%
AGGGGACTCAGAGCAATTGC+AGG + chr5_3:6944377-6944396 None:intergenic 55.0%
GGAACTACTGGTGACCCCAA+GGG - chr5_3:6944798-6944817 Msa0795050:intron 55.0%
GGTTCAATAGGCTTCTGGCG+CGG - chr5_3:6945211-6945230 Msa0795050:intron 55.0%
GTTCAATAGGCTTCTGGCGC+GGG - chr5_3:6945212-6945231 Msa0795050:intron 55.0%
TTCAATAGGCTTCTGGCGCG+GGG - chr5_3:6945213-6945232 Msa0795050:intron 55.0%
CATTGCTGTCAAACTGCGGC+TGG + chr5_3:6945995-6946014 None:intergenic 55.0%
GGGTCCTCCTGTACCAAATG+TGG - chr5_3:6946583-6946602 Msa0795050:intron 55.0%
ACCAAATGTGGATGCGTGCC+TGG - chr5_3:6946595-6946614 Msa0795050:intron 55.0%
TCCAGGCACGCATCCACATT+TGG + chr5_3:6946599-6946618 None:intergenic 55.0%
! CTCCTCTTGGTGTGCTTGCA+AGG + chr5_3:6946649-6946668 None:intergenic 55.0%
CAACAGGGGACATTGGAGAG+TGG - chr5_3:6946867-6946886 Msa0795050:intron 55.0%
TGTCTTGAGAGCCCTTCCGA+TGG - chr5_3:6947016-6947035 Msa0795050:intron 55.0%
GCAGTCCCCCAAAACAGGTC+GGG + chr5_3:6940162-6940181 None:intergenic 60.0%
CGCAGTCCCCCAAAACAGGT+CGG + chr5_3:6940163-6940182 None:intergenic 60.0%
CCAACGCAGTCCCCCAAAAC+AGG + chr5_3:6940167-6940186 None:intergenic 60.0%
!!! CCTGTTTTGGGGGACTGCGT+TGG - chr5_3:6940164-6940183 Msa0795050:intron 60.0%
! GTGCTGTTAGTGGCCATCCC+TGG - chr5_3:6941466-6941485 Msa0795050:intron 60.0%
CGGAACTACTGGTGACCCCA+AGG - chr5_3:6944797-6944816 Msa0795050:intron 60.0%
CCGCTTCACCCCAGCTAAGA+GGG + chr5_3:6944853-6944872 None:intergenic 60.0%
CCCTCTTAGCTGGGGTGAAG+CGG - chr5_3:6944850-6944869 Msa0795050:intron 60.0%
AGCTGGGGTGAAGCGGCTAT+TGG - chr5_3:6944857-6944876 Msa0795050:intron 60.0%
GCCCTTGCAAGCACACCAAG+AGG - chr5_3:6946644-6946663 Msa0795050:intron 60.0%
!! AACCGTGCCCTTGATGGGCT+TGG - chr5_3:6947152-6947171 Msa0795050:intron 60.0%
!! ACCGTGCCCTTGATGGGCTT+GGG - chr5_3:6947153-6947172 Msa0795050:intron 60.0%
TCCCAAGCCCATCAAGGGCA+CGG + chr5_3:6947157-6947176 None:intergenic 60.0%
! GGATTGGACGGACTCAGCGG+AGG + chr5_3:6934799-6934818 None:intergenic 65.0%
GCCGCTTCACCCCAGCTAAG+AGG + chr5_3:6944854-6944873 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 6934363 6949258 6934363 ID=Msa0795050;Name=Msa0795050
chr5_3 mRNA 6934363 6949258 6934363 ID=Msa0795050-mRNA-1;Parent=Msa0795050;Name=Msa0795050-mRNA-1;_AED=0.21;_eAED=0.21;_QI=18|0.85|0.93|1|0.92|0.93|15|311|547
chr5_3 exon 6934363 6934721 6934363 ID=Msa0795050-mRNA-1:exon:2851;Parent=Msa0795050-mRNA-1
chr5_3 exon 6935204 6935323 6935204 ID=Msa0795050-mRNA-1:exon:2850;Parent=Msa0795050-mRNA-1
chr5_3 exon 6935765 6935947 6935765 ID=Msa0795050-mRNA-1:exon:2849;Parent=Msa0795050-mRNA-1
chr5_3 exon 6936609 6936748 6936609 ID=Msa0795050-mRNA-1:exon:2848;Parent=Msa0795050-mRNA-1
chr5_3 exon 6936860 6937105 6936860 ID=Msa0795050-mRNA-1:exon:2847;Parent=Msa0795050-mRNA-1
chr5_3 exon 6937447 6937564 6937447 ID=Msa0795050-mRNA-1:exon:2846;Parent=Msa0795050-mRNA-1
chr5_3 exon 6937660 6937735 6937660 ID=Msa0795050-mRNA-1:exon:2845;Parent=Msa0795050-mRNA-1
chr5_3 exon 6937927 6937993 6937927 ID=Msa0795050-mRNA-1:exon:2844;Parent=Msa0795050-mRNA-1
chr5_3 exon 6938157 6938244 6938157 ID=Msa0795050-mRNA-1:exon:2843;Parent=Msa0795050-mRNA-1
chr5_3 exon 6938387 6938497 6938387 ID=Msa0795050-mRNA-1:exon:2842;Parent=Msa0795050-mRNA-1
chr5_3 exon 6938725 6938892 6938725 ID=Msa0795050-mRNA-1:exon:2841;Parent=Msa0795050-mRNA-1
chr5_3 exon 6939321 6939433 6939321 ID=Msa0795050-mRNA-1:exon:2840;Parent=Msa0795050-mRNA-1
chr5_3 exon 6939512 6939551 6939512 ID=Msa0795050-mRNA-1:exon:2839;Parent=Msa0795050-mRNA-1
chr5_3 exon 6939669 6939745 6939669 ID=Msa0795050-mRNA-1:exon:2838;Parent=Msa0795050-mRNA-1
chr5_3 exon 6949192 6949258 6949192 ID=Msa0795050-mRNA-1:exon:2837;Parent=Msa0795050-mRNA-1
chr5_3 five_prime_UTR 6949241 6949258 6949241 ID=Msa0795050-mRNA-1:five_prime_utr;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6949192 6949240 6949192 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6939669 6939745 6939669 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6939512 6939551 6939512 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6939321 6939433 6939321 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6938725 6938892 6938725 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6938387 6938497 6938387 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6938157 6938244 6938157 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6937927 6937993 6937927 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6937660 6937735 6937660 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6937447 6937564 6937447 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6936860 6937105 6936860 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6936609 6936748 6936609 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6935765 6935947 6935765 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6935204 6935323 6935204 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 CDS 6934674 6934721 6934674 ID=Msa0795050-mRNA-1:cds;Parent=Msa0795050-mRNA-1
chr5_3 three_prime_UTR 6934363 6934673 6934363 ID=Msa0795050-mRNA-1:three_prime_utr;Parent=Msa0795050-mRNA-1
Gene Sequence

>Msa0795050

ATGTGGTATTTATGGTGCCAATTCTGCAGAGTGGATTATGAGCATGGAGGTTCTGGGGCCATAGAATTTATTATATGCCATGCAGAGGTCTCAATTGCATTTGCAGAAGAAAAGAAGATACCTGAGCTTTTGAAGACATTTCCAAATGCAACCAAATATCTCAAGACAATTGTGAGCTTCGGAAAGGTTACCCCTGAACAAAAGCAAGAAGTTGAAAAGCTTGGATTGGCAATATATTCATGGACTGAATTTTTACAATTGGCGAGTTATTCATTTCATGGTGAAAGTCAGAGTTTTGATTTACCTGTAAAGAAAAGAAGCGATATTTGTACAATAATGTATACTAGCGGAACTACTGGTGACCCCAAGGGAGTATTGATATCCAATGAGAGTATTATTACCCTCTTAGCTGGGGTGAAGCGGCTATTGGAGAATGTCAATGATAAATTGACCGAGAAGGATGTGTACTTATCATACCTTCCTCTCGCACATACCTTTGATAGGGTCATTGAGGAGACATTTATATGGCATGGTGGTTCAATAGGCTTCTGGCGCGGGGATGTTAAGTTGTTAATTGAAGATCTCGGGGAGCTAAAACCAACTTTTTTCTGTGCGGTACCTCGTGTACTTGATAGAGTGTACTCAGGTTTGACACAGAAAATTTCTTCTGGAGGCTTCCTGAAGAAGACATTATTCAACTTTGCTTATTCATATAAGTTGAATAACATGAAGAAAGGACAAAACCATGCAGTAGCATCTCCACTTCTTGACAAAATTGTGTTCGATAAGGTGAAGCAAGGTTTAGGGGGTAGTGTACGTCTTATTTTGTCTGGAGCAGCACCTCTATCTTTGCATGTGGAAAGTTACTTACGGGTGGTGACTTGTGCTCATGTCCTACAAGGATATGGTCTGACTGAAACTTGTGCGGGAACCTTTGTCTCATTACCAAATGAACTAGATATGCTTGGAACAGTGGGTCCTCCTGTACCAAATGTGGATGCGTGCCTGGAATCTGTTCCTGAAATGGGTTACGATGCCCTTGCAAGCACACCAAGAGGAGAAATTTGTTTAAAAGGCGATACCTTGTTTTCGGGGTACTACAAACGTGAAGACCTCACAAAAGAGGTTCTGGTTGATGGATGGTTCCATACAGGGGACATTGGAGAGTGGCAACCTAATGGAAGTATGAAGATTATTGATCGGAAGAAGAATATATTCAAGCTTTCACAAGGAGAATATGTTGCTGTTGAAAACCTGGAGAATATTTATAGCCAAGTTCCTTCTGTTGAATCTATATGGGTTTATGGAAACAGTTTTGAGGCCTTCCTTGTTGCTGTTGTTAACCCCAGCAAACCAGCACTTGAACATTGGGCAGAAGAAAATGGTATATCTGTGGACTTCAATTCTCTCTGTGGAGATTCTAGGGCAAAAAGTTACATACTTGACGAGCTCTCAAAGATTGGAAAGGAAAAGAAGTTGAAAGGATTTGAGTTCATAAAAGCGGTCCATCTTGACCCAGTTCCATTTGATATGGAACGTGACCTTATCACTCCGACATACAAGAAGAAGAGGCTTCAGTTGCTCAAATACTATCAGAATGTGGTCGATGACATGTACAAAAGTGGAAATAAACCCCGTGCCTGA
Protein sequence

>Msa0795050

MWYLWCQFCRVDYEHGGSGAIEFIICHAEVSIAFAEEKKIPELLKTFPNATKYLKTIVSFGKVTPEQKQEVEKLGLAIYSWTEFLQLASYSFHGESQSFDLPVKKRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLENVNDKLTEKDVYLSYLPLAHTFDRVIEETFIWHGGSIGFWRGDVKLLIEDLGELKPTFFCAVPRVLDRVYSGLTQKISSGGFLKKTLFNFAYSYKLNNMKKGQNHAVASPLLDKIVFDKVKQGLGGSVRLILSGAAPLSLHVESYLRVVTCAHVLQGYGLTETCAGTFVSLPNELDMLGTVGPPVPNVDACLESVPEMGYDALASTPRGEICLKGDTLFSGYYKREDLTKEVLVDGWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYSQVPSVESIWVYGNSFEAFLVAVVNPSKPALEHWAEENGISVDFNSLCGDSRAKSYILDELSKIGKEKKLKGFEFIKAVHLDPVPFDMERDLITPTYKKKRLQLLKYYQNVVDDMYKSGNKPRA*