AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0480980


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0480980 MtrunA17_Chr4g0074591 96.667 360 11 1 1 360 1 359 0.0 712
Msa0480980 MtrunA17_Chr2g0288101 69.730 370 101 2 12 379 2 362 0.0 530
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0480980 AT4G04880.1 66.298 362 111 1 13 374 1 351 4.33e-175 491
Msa0480980 AT4G04880.2 61.381 391 111 2 13 374 1 380 4.20e-169 478
Msa0480980 AT4G04880.3 68.519 270 74 1 13 282 1 259 3.89e-130 375

Find 119 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATTGGAAATGAGGCATTT+TGG 0.146875 3_3:+86699215 Msa0480980:CDS
TCAATTGATGCTCATCATTT+TGG 0.186433 3_3:+86700011 Msa0480980:CDS
ATCTGTCAGTTCGGTTGATC+TGG 0.224791 3_3:+86698942 Msa0480980:CDS
ACTAAAGAATAGATTGAAAT+TGG 0.226773 3_3:+86700866 Msa0480980:three_prime_UTR
CATGCATGTCCAATCCTTTC+AGG 0.257021 3_3:-86699570 None:intergenic
TTCGATGTTATGATGCTTAC+TGG 0.265041 3_3:+86700769 Msa0480980:three_prime_UTR
GTTTCAGTGGCTAGTGAAAT+TGG 0.268013 3_3:+86700944 Msa0480980:three_prime_UTR
AAAATTGCTGCTTCTTCATT+TGG 0.270139 3_3:+86700487 Msa0480980:CDS
GCATTTAACTGGACTGTTCT+TGG 0.273826 3_3:+86700919 Msa0480980:three_prime_UTR
CTTCTTAACAAGTTCTCTTA+AGG 0.289773 3_3:-86701190 None:intergenic
CTTTCTTGCGTCTTGTATCT+TGG 0.292422 3_3:-86697677 None:intergenic
GCATAATAATATCATTAATA+TGG 0.293607 3_3:-86701114 None:intergenic
AATGAGTTAACAAGGTTGTT+TGG 0.296616 3_3:+86700836 Msa0480980:three_prime_UTR
GATGGTGTGGATGTGTATTT+AGG 0.311844 3_3:+86700743 Msa0480980:three_prime_UTR
ACTAAAATTTGCTCGAGAAC+AGG 0.322893 3_3:+86699394 Msa0480980:CDS
TTATAAATCAGGCATTTAAC+TGG 0.323277 3_3:+86700908 Msa0480980:three_prime_UTR
GTTGTTGGAATTGACCTCTC+TGG 0.326172 3_3:+86699239 Msa0480980:CDS
TTTGTTTGACATCAAACATT+AGG 0.333028 3_3:+86699973 Msa0480980:CDS
ATGAGTTAACAAGGTTGTTT+GGG 0.333110 3_3:+86700837 Msa0480980:three_prime_UTR
CAGCGAACTTGCTAAAGGTT+TGG 0.334780 3_3:+86697863 Msa0480980:intron
TATATTTGACCGCTTGAGAT+AGG 0.339541 3_3:+86701076 Msa0480980:three_prime_UTR
CAGGTCAAGTGAAGTCATTT+TGG 0.342711 3_3:+86700978 Msa0480980:three_prime_UTR
AGAGCGTTTGCTCATTCCTT+TGG 0.345646 3_3:-86698890 None:intergenic
TGCTAAAGGTTTGGGTGATA+AGG 0.357084 3_3:+86697872 Msa0480980:CDS
AGCGAACTTGCTAAAGGTTT+GGG 0.357859 3_3:+86697864 Msa0480980:intron
TGAGGATAACATGCTGGACT+TGG 0.366709 3_3:-86697911 None:intergenic
TTCTTAACAAGTTCTCTTAA+GGG 0.375495 3_3:-86701189 None:intergenic
TATATTGAAGCTGTACTTGA+AGG 0.391559 3_3:+86698913 Msa0480980:CDS
TGAGCATGCAATTCTACCTT+TGG 0.392099 3_3:-86697730 None:intergenic
TGCTGTTGAATTTATATTTG+CGG 0.392971 3_3:+86700636 Msa0480980:CDS
GCTGAAATCGTCTAAAATTC+CGG 0.393662 3_3:+86699620 Msa0480980:CDS
TTTGTATTCGTTGGAGAGAC+TGG 0.404259 3_3:-86700467 None:intergenic
CTGAGAGTATAGGGTTTGAA+TGG 0.407987 3_3:-86698996 None:intergenic
TAGCTGAGACTGAGAGTATA+GGG 0.413511 3_3:-86699005 None:intergenic
TTGTTGGAATTGACCTCTCT+GGG 0.414570 3_3:+86699240 Msa0480980:CDS
CTTAAGAGAACTTGTTAAGA+AGG 0.416179 3_3:+86701191 Msa0480980:three_prime_UTR
AAATGATGAGCATCAATTGA+TGG 0.417937 3_3:-86700008 None:intergenic
TAGTTTAGCAGCAAATGATC+TGG 0.425802 3_3:+86700693 Msa0480980:CDS
TCATGTATCTCCCTCAAGTT+AGG 0.430418 3_3:-86699531 None:intergenic
TTGTTAGGTGCCTAACTTGA+GGG 0.431636 3_3:+86699521 Msa0480980:intron
GACTTTCTTCCTGAAAGGAT+TGG 0.446859 3_3:+86699561 Msa0480980:CDS
GTAGCTGAGACTGAGAGTAT+AGG 0.447249 3_3:-86699006 None:intergenic
CAAGCGGTCAAATATAACTT+TGG 0.465490 3_3:-86701069 None:intergenic
GGCTTCTCTTAAGCATTGAC+CGG 0.466053 3_3:+86699073 Msa0480980:CDS
ATATTTGACCGCTTGAGATA+GGG 0.473201 3_3:+86701077 Msa0480980:three_prime_UTR
TGGACATGCATGTTTCTTTG+AGG 0.475411 3_3:+86699581 Msa0480980:CDS
TGCTTACTGGGTATACAGTA+AGG 0.476050 3_3:+86700782 Msa0480980:three_prime_UTR
TTTCCCAGCGAACTTGCTAA+AGG 0.480413 3_3:+86697858 Msa0480980:intron
CTGCTTCCGTTGTCTCCCTC+CGG 0.484826 3_3:-86699092 None:intergenic
GAATTGCATGCTCACCTCAA+TGG 0.485177 3_3:+86697739 Msa0480980:CDS
TCTGTCAGTTCGGTTGATCT+GGG 0.486875 3_3:+86698943 Msa0480980:CDS
GAAATTGGAATGGTCAGGTC+AGG 0.495433 3_3:+86700959 Msa0480980:three_prime_UTR
TGCGGATAACACGGCAAAAG+AGG 0.497210 3_3:+86700654 Msa0480980:CDS
GAAAGGAGAGTGAGATGGAG+TGG 0.497436 3_3:+86697695 Msa0480980:CDS
TTTAACTGGACTGTTCTTGG+AGG 0.506134 3_3:+86700922 Msa0480980:three_prime_UTR
GGAATCCAGCCGTTGGTGAA+TGG 0.506410 3_3:+86699261 Msa0480980:CDS
TTGAGGAGGAACACTGGAGA+AGG 0.507250 3_3:+86699598 Msa0480980:CDS
TCTAGGTACAATGACGTACA+TGG 0.509146 3_3:+86700719 Msa0480980:exon
TGCTTGACTTTCTTCCTGAA+AGG 0.513219 3_3:+86699556 Msa0480980:CDS
TCATCAGTACACAGGACTAC+AGG 0.514472 3_3:-86700427 None:intergenic
AATATTGGATTGAGAAGCAT+AGG 0.514496 3_3:+86697555 Msa0480980:five_prime_UTR
AAAGGTATGTGTTGATAAAG+TGG 0.514853 3_3:+86701026 Msa0480980:three_prime_UTR
CTAAAATTTGCTCGAGAACA+GGG 0.517085 3_3:+86699395 Msa0480980:CDS
GGAGACAACGGAAGCAGCAA+TGG 0.518470 3_3:+86699098 Msa0480980:CDS
TCATGCTTGCATTGGAAATG+AGG 0.520953 3_3:+86699207 Msa0480980:CDS
GCTGTAGGTCATGCTTGCAT+TGG 0.522986 3_3:+86699199 Msa0480980:intron
ACTGTTCTTGGAGGTTTCAG+TGG 0.525239 3_3:+86700931 Msa0480980:three_prime_UTR
CAGAAGTGTGGAGTCTCTGA+TGG 0.532446 3_3:-86697764 None:intergenic
GAGGATAACATGCTGGACTT+GGG 0.533426 3_3:-86697910 None:intergenic
ATAGAAGTAATGAAAATACT+AGG 0.534541 3_3:+86699034 Msa0480980:CDS
CTCTCTGGGAATCCAGCCGT+TGG 0.535949 3_3:+86699254 Msa0480980:CDS
CAAGATACAAGACGCAAGAA+AGG 0.535955 3_3:+86697678 Msa0480980:CDS
TTATATAGGCCTTGGAAGGA+AGG 0.539594 3_3:+86700591 Msa0480980:intron
ATATACCATTCACCAACGGC+TGG 0.542162 3_3:-86699266 None:intergenic
TTTGTTAGGTGCCTAACTTG+AGG 0.545284 3_3:+86699520 Msa0480980:intron
CAAACATCTCCTTCCTTCCA+AGG 0.549364 3_3:-86700600 None:intergenic
CATGATCAGTTGTAAGAATG+TGG 0.551417 3_3:-86698443 None:intergenic
GATATTATATAGGCCTTGGA+AGG 0.554197 3_3:+86700587 Msa0480980:intron
GTTTCTTTGAGGAGGAACAC+TGG 0.554373 3_3:+86699592 Msa0480980:CDS
AGCAAATGATCTGGAGCTCT+AGG 0.556308 3_3:+86700702 Msa0480980:CDS
CGCAAGAAAGGAGAGTGAGA+TGG 0.559653 3_3:+86697690 Msa0480980:CDS
AGGTCTAAGATCTGTCAGTT+CGG 0.564884 3_3:+86698933 Msa0480980:CDS
CTAGTGAAATTGGAATGGTC+AGG 0.568231 3_3:+86700954 Msa0480980:three_prime_UTR
TTCTCTTAAGCATTGACCGG+AGG 0.575999 3_3:+86699076 Msa0480980:CDS
TCTCTTAAGCATTGACCGGA+GGG 0.576547 3_3:+86699077 Msa0480980:CDS
TCGATGTTATGATGCTTACT+GGG 0.579011 3_3:+86700770 Msa0480980:three_prime_UTR
ACATGCATGTTTCTTTGAGG+AGG 0.579495 3_3:+86699584 Msa0480980:CDS
ATTTATATTTGCGGATAACA+CGG 0.583351 3_3:+86700645 Msa0480980:CDS
TATTTGACCGCTTGAGATAG+GGG 0.583421 3_3:+86701078 Msa0480980:three_prime_UTR
TAAGGGACGCAACTAACTGC+TGG 0.589077 3_3:+86700800 Msa0480980:three_prime_UTR
ATGAGCATCAATTGATGGAA+CGG 0.591328 3_3:-86700003 None:intergenic
CTAGGTACAATGACGTACAT+GGG 0.594848 3_3:+86700720 Msa0480980:exon
AGTGGCTAGTGAAATTGGAA+TGG 0.597592 3_3:+86700949 Msa0480980:three_prime_UTR
TAGTAGACAATGAGTTAACA+AGG 0.599067 3_3:+86700828 Msa0480980:three_prime_UTR
TACAATGACGTACATGGGGA+TGG 0.600289 3_3:+86700725 Msa0480980:three_prime_UTR
TTAACTTTGATGAGCTCGTG+TGG 0.601630 3_3:+86697640 Msa0480980:five_prime_UTR
GTGGTGTATGTCAATTCCAA+AGG 0.611484 3_3:+86697714 Msa0480980:CDS
ATTTGACCGCTTGAGATAGG+GGG 0.614834 3_3:+86701079 Msa0480980:three_prime_UTR
GTCAGAGAATGTTGTATATG+TGG 0.621848 3_3:+86698753 Msa0480980:CDS
GTATTCGTTGGAGAGACTGG+TGG 0.624898 3_3:-86700464 None:intergenic
TGTAACTCTTCACTGTGGAG+AGG 0.625040 3_3:+86699424 Msa0480980:CDS
AGACGATCGTTCATTATCTG+AGG 0.628996 3_3:+86698398 Msa0480980:intron
TGACGTACATGGGGATGGTG+TGG 0.629757 3_3:+86700730 Msa0480980:three_prime_UTR
ATTTGAAACATACAGAAGTG+TGG 0.630716 3_3:-86697776 None:intergenic
TGAGTTAACAAGGTTGTTTG+GGG 0.635524 3_3:+86700838 Msa0480980:three_prime_UTR
AAAATAGGAAATGATAACAA+GGG 0.637400 3_3:+86701166 Msa0480980:three_prime_UTR
CATTGACCGGAGGGAGACAA+CGG 0.639400 3_3:+86699086 Msa0480980:CDS
GCTTACTGGGTATACAGTAA+GGG 0.640133 3_3:+86700783 Msa0480980:three_prime_UTR
TCTTACAACTGATCATGCGA+CGG 0.642944 3_3:+86698449 Msa0480980:CDS
ATTATTATGCCCATGCAACA+CGG 0.643033 3_3:+86701127 Msa0480980:three_prime_UTR
CAACGGCTGGATTCCCAGAG+AGG 0.647404 3_3:-86699253 None:intergenic
GAGTTAACAAGGTTGTTTGG+GGG 0.667687 3_3:+86700839 Msa0480980:three_prime_UTR
CACCTGAGTCATCAGTACAC+AGG 0.669280 3_3:-86700435 None:intergenic
GGAGTTGAGAACTACTCCAA+AGG 0.673352 3_3:+86698774 Msa0480980:CDS
AGTCTCTGATGGATCCATTG+AGG 0.676628 3_3:-86697753 None:intergenic
GTCCTGTGTACTGATGACTC+AGG 0.685762 3_3:+86700433 Msa0480980:CDS
AATGATATACCATTCACCAA+CGG 0.687223 3_3:-86699270 None:intergenic
TAGGTACAATGACGTACATG+GGG 0.693449 3_3:+86700721 Msa0480980:exon
CTTTATGTAACTCTTCACTG+TGG 0.703519 3_3:+86699419 Msa0480980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAATTAGTTTATAAATC+AGG + chr3_3:86700897-86700916 Msa0480980:three_prime_UTR 10.0%
!!! GGTTTAAATATAATTTTCTT+TGG - chr3_3:86698227-86698246 None:intergenic 15.0%
!! TTTAATTGTTTGGTTATTTA+CGG - chr3_3:86699748-86699767 None:intergenic 15.0%
!! TAAATAACCAAACAATTAAA+CGG + chr3_3:86699748-86699767 Msa0480980:intron 15.0%
!! GCATAATAATATCATTAATA+TGG - chr3_3:86701117-86701136 None:intergenic 15.0%
!!! AAAAGACCTTATTTAAAAAT+AGG + chr3_3:86701151-86701170 Msa0480980:three_prime_UTR 15.0%
!!! TCATTTCCTATTTTTAAATA+AGG - chr3_3:86701160-86701179 None:intergenic 15.0%
!!! TCAATCCAATATTTTTATCA+AGG - chr3_3:86697548-86697567 None:intergenic 20.0%
!! TTATATTTAAACCATTGAGA+AGG + chr3_3:86698234-86698253 Msa0480980:intron 20.0%
!! TAATGCAAATGCAATAAATT+TGG - chr3_3:86698694-86698713 None:intergenic 20.0%
!! AATTTATTGCATTTGCATTA+TGG + chr3_3:86698694-86698713 Msa0480980:intron 20.0%
!!! ATATTTTCTTCACAAATTCA+TGG - chr3_3:86698842-86698861 None:intergenic 20.0%
!! ATAGAAGTAATGAAAATACT+AGG + chr3_3:86699034-86699053 Msa0480980:CDS 20.0%
!!! ATTTGAAGTAAATACTATAG+AGG - chr3_3:86699308-86699327 None:intergenic 20.0%
!!! TGACTCAAATTTTTTTTGTT+AGG + chr3_3:86699506-86699525 Msa0480980:intron 20.0%
!! TTTATCATTTATGTCACTAA+AGG - chr3_3:86699667-86699686 None:intergenic 20.0%
!! TTAATTGTTTGGTTATTTAC+GGG - chr3_3:86699747-86699766 None:intergenic 20.0%
!! AAAATTGACAAAATAAAGGT+TGG - chr3_3:86699785-86699804 None:intergenic 20.0%
!! CTTCAAAATTGACAAAATAA+AGG - chr3_3:86699789-86699808 None:intergenic 20.0%
!!! TTTTGAAGTTTTATTTGATC+TGG + chr3_3:86699801-86699820 Msa0480980:intron 20.0%
!!! TTTGAAGTTTTATTTGATCT+GGG + chr3_3:86699802-86699821 Msa0480980:intron 20.0%
!! GATATAGAATATATGTAACT+TGG - chr3_3:86699929-86699948 None:intergenic 20.0%
!!! GAAAAAATGTTTCTTCTTTT+TGG + chr3_3:86700153-86700172 Msa0480980:intron 20.0%
!! TAAACATAAAAAGTGAAAAC+GGG - chr3_3:86700210-86700229 None:intergenic 20.0%
!! GTAAACATAAAAAGTGAAAA+CGG - chr3_3:86700211-86700230 None:intergenic 20.0%
!!! TGTTGATTGTGATATTATAT+AGG + chr3_3:86700577-86700596 Msa0480980:intron 20.0%
!! ACTAAAGAATAGATTGAAAT+TGG + chr3_3:86700866-86700885 Msa0480980:three_prime_UTR 20.0%
!!! TTGATAATTCTCTCAAAAAA+AGG + chr3_3:86701008-86701027 Msa0480980:three_prime_UTR 20.0%
!! AAAAATAGGAAATGATAACA+AGG + chr3_3:86701165-86701184 Msa0480980:three_prime_UTR 20.0%
!! AAAATAGGAAATGATAACAA+GGG + chr3_3:86701166-86701185 Msa0480980:three_prime_UTR 20.0%
!!! CCAATATTTTTATCAAGGAT+GGG - chr3_3:86697543-86697562 None:intergenic 25.0%
!!! TCCAATATTTTTATCAAGGA+TGG - chr3_3:86697544-86697563 None:intergenic 25.0%
!! AAAAGTAAAATTGAGAGTGT+TGG - chr3_3:86697826-86697845 None:intergenic 25.0%
! GTGATATACTGTAAAAGAAA+CGG - chr3_3:86697972-86697991 None:intergenic 25.0%
! TCTGTTTACTCCAAATTAAA+TGG + chr3_3:86698022-86698041 Msa0480980:intron 25.0%
! TAAATACAGGCCATTTAATT+TGG - chr3_3:86698035-86698054 None:intergenic 25.0%
! TAAATGCTGGTAATAAATAC+AGG - chr3_3:86698048-86698067 None:intergenic 25.0%
! AATTTCTCTCTAATAAATGC+TGG - chr3_3:86698061-86698080 None:intergenic 25.0%
! AATACAATAACTAGAGATAG+AGG + chr3_3:86698197-86698216 Msa0480980:intron 25.0%
! ATACAATAACTAGAGATAGA+GGG + chr3_3:86698198-86698217 Msa0480980:intron 25.0%
! TTAATACATGACAGAATGTT+AGG + chr3_3:86698286-86698305 Msa0480980:intron 25.0%
! TAATACATGACAGAATGTTA+GGG + chr3_3:86698287-86698306 Msa0480980:intron 25.0%
! ATGAATAAAATACTGACAGT+AGG - chr3_3:86698671-86698690 None:intergenic 25.0%
! CTAGGAAAAAAATCTTTGTT+AGG + chr3_3:86699052-86699071 Msa0480980:CDS 25.0%
! AGTGTAATACACAAATCATT+TGG + chr3_3:86699129-86699148 Msa0480980:intron 25.0%
! GTGTAATACACAAATCATTT+GGG + chr3_3:86699130-86699149 Msa0480980:intron 25.0%
! TAAATACTATAGAGGAATCT+AGG - chr3_3:86699300-86699319 None:intergenic 25.0%
! TAACTTGGCAGTTAATAAAT+TGG - chr3_3:86699914-86699933 None:intergenic 25.0%
!! ATATCATCTTCACAATTTTC+AGG + chr3_3:86699944-86699963 Msa0480980:intron 25.0%
! TTTGTTTGACATCAAACATT+AGG + chr3_3:86699973-86699992 Msa0480980:CDS 25.0%
! TGTATATTAGACTTTGATCA+AGG + chr3_3:86700333-86700352 Msa0480980:intron 25.0%
! TGCTGTTGAATTTATATTTG+CGG + chr3_3:86700636-86700655 Msa0480980:CDS 25.0%
! ATTTATATTTGCGGATAACA+CGG + chr3_3:86700645-86700664 Msa0480980:CDS 25.0%
! TTATAAATCAGGCATTTAAC+TGG + chr3_3:86700908-86700927 Msa0480980:three_prime_UTR 25.0%
! TTCTTAACAAGTTCTCTTAA+GGG - chr3_3:86701192-86701211 None:intergenic 25.0%
CCCATCCTTGATAAAAATAT+TGG + chr3_3:86697540-86697559 Msa0480980:five_prime_UTR 30.0%
! AATATTGGATTGAGAAGCAT+AGG + chr3_3:86697555-86697574 Msa0480980:five_prime_UTR 30.0%
! ATTTGAAACATACAGAAGTG+TGG - chr3_3:86697779-86697798 None:intergenic 30.0%
!! AAATTGAGAGTGTTGGAAAA+CGG - chr3_3:86697819-86697838 None:intergenic 30.0%
! AAGGGAAATACATACTTTTG+AGG - chr3_3:86697932-86697951 None:intergenic 30.0%
ACACGATTACTCCAAATTTA+GGG + chr3_3:86697990-86698009 Msa0480980:intron 30.0%
! TTTGGAGTAAACAGAAATGT+TGG - chr3_3:86698017-86698036 None:intergenic 30.0%
AGGTGCTAGAATATCATATT+AGG + chr3_3:86698109-86698128 Msa0480980:intron 30.0%
TGCTAGAATATCATATTAGG+TGG + chr3_3:86698112-86698131 Msa0480980:intron 30.0%
TTAGGTGGTTTAAACATGTT+TGG + chr3_3:86698127-86698146 Msa0480980:intron 30.0%
GTAAGAATAGTAGTCTAGAT+GGG + chr3_3:86698171-86698190 Msa0480980:intron 30.0%
TAAGAATAGTAGTCTAGATG+GGG + chr3_3:86698172-86698191 Msa0480980:intron 30.0%
!! TTGAGTCTTTTTAGCACATT+AGG - chr3_3:86698341-86698360 None:intergenic 30.0%
TAATCAAGCGGAAAATACTT+GGG - chr3_3:86698645-86698664 None:intergenic 30.0%
ATGCAGAAAAATGAATCCAA+AGG + chr3_3:86698874-86698893 Msa0480980:intron 30.0%
TATATTGAAGCTGTACTTGA+AGG + chr3_3:86698913-86698932 Msa0480980:CDS 30.0%
! TTTTTAATCTCTTCGCTGAA+AGG - chr3_3:86698976-86698995 None:intergenic 30.0%
AAATCATTTGGGCAAACTTA+AGG + chr3_3:86699141-86699160 Msa0480980:intron 30.0%
CAAAGAAGCAGATTATTCAA+AGG - chr3_3:86699180-86699199 None:intergenic 30.0%
AATGATATACCATTCACCAA+CGG - chr3_3:86699273-86699292 None:intergenic 30.0%
!! TTTTATTTGATCTGGGAAAG+TGG + chr3_3:86699809-86699828 Msa0480980:intron 30.0%
AAATGATGAGCATCAATTGA+TGG - chr3_3:86700011-86700030 None:intergenic 30.0%
! TCAATTGATGCTCATCATTT+TGG + chr3_3:86700011-86700030 Msa0480980:CDS 30.0%
ATGAAGTTGAGAATACAATG+AGG - chr3_3:86700096-86700115 None:intergenic 30.0%
!!! TCGAGATTTTAGAGTAGAAA+TGG + chr3_3:86700116-86700135 Msa0480980:intron 30.0%
! GATGAGAAATTGTACTTTTC+TGG - chr3_3:86700273-86700292 None:intergenic 30.0%
! AAAATTGCTGCTTCTTCATT+TGG + chr3_3:86700487-86700506 Msa0480980:CDS 30.0%
TTGTGATATTATATAGGCCT+TGG + chr3_3:86700583-86700602 Msa0480980:intron 30.0%
TAGTAGACAATGAGTTAACA+AGG + chr3_3:86700828-86700847 Msa0480980:three_prime_UTR 30.0%
AATGAGTTAACAAGGTTGTT+TGG + chr3_3:86700836-86700855 Msa0480980:three_prime_UTR 30.0%
ATGAGTTAACAAGGTTGTTT+GGG + chr3_3:86700837-86700856 Msa0480980:three_prime_UTR 30.0%
! AAAGGTATGTGTTGATAAAG+TGG + chr3_3:86701026-86701045 Msa0480980:three_prime_UTR 30.0%
CTTCTTAACAAGTTCTCTTA+AGG - chr3_3:86701193-86701212 None:intergenic 30.0%
!! CTTAAGAGAACTTGTTAAGA+AGG + chr3_3:86701191-86701210 Msa0480980:three_prime_UTR 30.0%
!! AATTGAGAGTGTTGGAAAAC+GGG - chr3_3:86697818-86697837 None:intergenic 35.0%
!! TACTTTTGAGGATAACATGC+TGG - chr3_3:86697920-86697939 None:intergenic 35.0%
GTAAAAGAGTGAGAATGGAA+GGG - chr3_3:86697950-86697969 None:intergenic 35.0%
AAACGGTAAAAGAGTGAGAA+TGG - chr3_3:86697955-86697974 None:intergenic 35.0%
CACACGATTACTCCAAATTT+AGG + chr3_3:86697989-86698008 Msa0480980:intron 35.0%
GAAATGTTGGTCCCTAAATT+TGG - chr3_3:86698004-86698023 None:intergenic 35.0%
AAATTAGATAGCCCATGTAG+TGG + chr3_3:86698076-86698095 Msa0480980:intron 35.0%
GGTAAGAATAGTAGTCTAGA+TGG + chr3_3:86698170-86698189 Msa0480980:intron 35.0%
TGCTTCTAAATCCTTCTCAA+TGG - chr3_3:86698248-86698267 None:intergenic 35.0%
GAGAAGGATTTAGAAGCAAA+TGG + chr3_3:86698250-86698269 Msa0480980:intron 35.0%
ATAACCAACGTTAGCAAAAG+CGG - chr3_3:86698364-86698383 None:intergenic 35.0%
CATGATCAGTTGTAAGAATG+TGG - chr3_3:86698446-86698465 None:intergenic 35.0%
! ACACATTGCCATTTGCATAT+GGG + chr3_3:86698554-86698573 Msa0480980:intron 35.0%
CTAATCAAGCGGAAAATACT+TGG - chr3_3:86698646-86698665 None:intergenic 35.0%
TGGTAGCAACTTCTATATAC+AGG + chr3_3:86698714-86698733 Msa0480980:intron 35.0%
GTCAGAGAATGTTGTATATG+TGG + chr3_3:86698753-86698772 Msa0480980:CDS 35.0%
ACTACTCCAAAGGTAAAGAA+AGG + chr3_3:86698784-86698803 Msa0480980:intron 35.0%
TGAGATCCTTTCTTTACCTT+TGG - chr3_3:86698793-86698812 None:intergenic 35.0%
! ATAATCTGCTTCTTTGCTGT+AGG + chr3_3:86699184-86699203 Msa0480980:intron 35.0%
!! CATTGGAAATGAGGCATTTT+GGG + chr3_3:86699216-86699235 Msa0480980:CDS 35.0%
!! ATTGGAAATGAGGCATTTTG+GGG + chr3_3:86699217-86699236 Msa0480980:CDS 35.0%
ATTCCTGGTTTATCATTTGC+AGG + chr3_3:86699354-86699373 Msa0480980:intron 35.0%
TTCCTGGTTTATCATTTGCA+GGG + chr3_3:86699355-86699374 Msa0480980:intron 35.0%
! ACTAAAATTTGCTCGAGAAC+AGG + chr3_3:86699394-86699413 Msa0480980:CDS 35.0%
! CTAAAATTTGCTCGAGAACA+GGG + chr3_3:86699395-86699414 Msa0480980:CDS 35.0%
CTTTATGTAACTCTTCACTG+TGG + chr3_3:86699419-86699438 Msa0480980:CDS 35.0%
AGTGAAACAACACTAGTAAC+AGG - chr3_3:86699470-86699489 None:intergenic 35.0%
!! TGTTACTAGTGTTGTTTCAC+TGG + chr3_3:86699469-86699488 Msa0480980:intron 35.0%
! GCTGAAATCGTCTAAAATTC+CGG + chr3_3:86699620-86699639 Msa0480980:CDS 35.0%
ATTCAACTTGCAAGTCTAAC+CGG - chr3_3:86699642-86699661 None:intergenic 35.0%
! GTGATGTACTGTGATTTGTA+TGG + chr3_3:86699703-86699722 Msa0480980:intron 35.0%
ACGGGTAAAAATTCTTCTTG+TGG - chr3_3:86699729-86699748 None:intergenic 35.0%
TGCAGAACCGTTTAATTGTT+TGG - chr3_3:86699758-86699777 None:intergenic 35.0%
TCTCATTTCTACTGATCATC+CGG + chr3_3:86699850-86699869 Msa0480980:intron 35.0%
ATGAGCATCAATTGATGGAA+CGG - chr3_3:86700006-86700025 None:intergenic 35.0%
!! TTGATGCTCATCATTTTGGT+AGG + chr3_3:86700015-86700034 Msa0480980:intron 35.0%
!! GAGGAAATTTAGCTTGAAGA+GGG - chr3_3:86700233-86700252 None:intergenic 35.0%
!! AGAGGAAATTTAGCTTGAAG+AGG - chr3_3:86700234-86700253 None:intergenic 35.0%
TGAGTAGAATGACATCAGAA+GGG - chr3_3:86700311-86700330 None:intergenic 35.0%
TTGAGTAGAATGACATCAGA+AGG - chr3_3:86700312-86700331 None:intergenic 35.0%
! AGCAGCAATTTTGTATTCGT+TGG - chr3_3:86700479-86700498 None:intergenic 35.0%
GATATTATATAGGCCTTGGA+AGG + chr3_3:86700587-86700606 Msa0480980:intron 35.0%
TAGTTTAGCAGCAAATGATC+TGG + chr3_3:86700693-86700712 Msa0480980:CDS 35.0%
TTCGATGTTATGATGCTTAC+TGG + chr3_3:86700769-86700788 Msa0480980:three_prime_UTR 35.0%
TCGATGTTATGATGCTTACT+GGG + chr3_3:86700770-86700789 Msa0480980:three_prime_UTR 35.0%
TGAGTTAACAAGGTTGTTTG+GGG + chr3_3:86700838-86700857 Msa0480980:three_prime_UTR 35.0%
!! AGGTCAAGTGAAGTCATTTT+GGG + chr3_3:86700979-86700998 Msa0480980:three_prime_UTR 35.0%
CAAGCGGTCAAATATAACTT+TGG - chr3_3:86701072-86701091 None:intergenic 35.0%
TATATTTGACCGCTTGAGAT+AGG + chr3_3:86701076-86701095 Msa0480980:three_prime_UTR 35.0%
ATATTTGACCGCTTGAGATA+GGG + chr3_3:86701077-86701096 Msa0480980:three_prime_UTR 35.0%
ATTATTATGCCCATGCAACA+CGG + chr3_3:86701127-86701146 Msa0480980:three_prime_UTR 35.0%
TTAACTTTGATGAGCTCGTG+TGG + chr3_3:86697640-86697659 Msa0480980:five_prime_UTR 40.0%
CTTTCTTGCGTCTTGTATCT+TGG - chr3_3:86697680-86697699 None:intergenic 40.0%
CAAGATACAAGACGCAAGAA+AGG + chr3_3:86697678-86697697 Msa0480980:CDS 40.0%
GTGGTGTATGTCAATTCCAA+AGG + chr3_3:86697714-86697733 Msa0480980:CDS 40.0%
TGAGCATGCAATTCTACCTT+TGG - chr3_3:86697733-86697752 None:intergenic 40.0%
!! ATTGAGAGTGTTGGAAAACG+GGG - chr3_3:86697817-86697836 None:intergenic 40.0%
AAACCTTTAGCAAGTTCGCT+GGG - chr3_3:86697864-86697883 None:intergenic 40.0%
!! AGCGAACTTGCTAAAGGTTT+GGG + chr3_3:86697864-86697883 Msa0480980:intron 40.0%
TGCTAAAGGTTTGGGTGATA+AGG + chr3_3:86697872-86697891 Msa0480980:CDS 40.0%
GGTAAAAGAGTGAGAATGGA+AGG - chr3_3:86697951-86697970 None:intergenic 40.0%
!! GAAGAGATTTGTTGAAGCAG+CGG + chr3_3:86698149-86698168 Msa0480980:intron 40.0%
!! GCTTTTGCTAACGTTGGTTA+TGG + chr3_3:86698363-86698382 Msa0480980:intron 40.0%
AGACGATCGTTCATTATCTG+AGG + chr3_3:86698398-86698417 Msa0480980:intron 40.0%
TCTTACAACTGATCATGCGA+CGG + chr3_3:86698449-86698468 Msa0480980:CDS 40.0%
AAGTATGTCTGACAGCACTT+GGG + chr3_3:86698490-86698509 Msa0480980:intron 40.0%
TGTCACCGTGACATTAAATC+TGG + chr3_3:86698521-86698540 Msa0480980:intron 40.0%
GTCACCGTGACATTAAATCT+GGG + chr3_3:86698522-86698541 Msa0480980:intron 40.0%
AAATGGCAATGTGTGTTGTG+TGG - chr3_3:86698548-86698567 None:intergenic 40.0%
! CACACATTGCCATTTGCATA+TGG + chr3_3:86698553-86698572 Msa0480980:intron 40.0%
CATCCATGAGTACATTTGTG+TGG + chr3_3:86698587-86698606 Msa0480980:intron 40.0%
GTCACCGTGACATTAAATCT+GGG - chr3_3:86698522-86698541 None:intergenic 40.0%
TGTCACCGTGACATTAAATC+TGG - chr3_3:86698521-86698540 None:intergenic 40.0%
CTTCACAAATTCATGGACAC+AGG - chr3_3:86698835-86698854 None:intergenic 40.0%
! AGGTCTAAGATCTGTCAGTT+CGG + chr3_3:86698933-86698952 Msa0480980:CDS 40.0%
! CTGAGAGTATAGGGTTTGAA+TGG - chr3_3:86698999-86699018 None:intergenic 40.0%
! TAGCTGAGACTGAGAGTATA+GGG - chr3_3:86699008-86699027 None:intergenic 40.0%
TCATGCTTGCATTGGAAATG+AGG + chr3_3:86699207-86699226 Msa0480980:CDS 40.0%
!! GCATTGGAAATGAGGCATTT+TGG + chr3_3:86699215-86699234 Msa0480980:CDS 40.0%
TTGTTGGAATTGACCTCTCT+GGG + chr3_3:86699240-86699259 Msa0480980:CDS 40.0%
ATGCTTGAGCTCAAAATTCC+TGG + chr3_3:86699339-86699358 Msa0480980:intron 40.0%
AACCCTGCAAATGATAAACC+AGG - chr3_3:86699360-86699379 None:intergenic 40.0%
!! TCTCGAGCAAATTTTAGTGC+TGG - chr3_3:86699392-86699411 None:intergenic 40.0%
ACAACACTAGTAACAGGTAC+AGG - chr3_3:86699464-86699483 None:intergenic 40.0%
TTTGTTAGGTGCCTAACTTG+AGG + chr3_3:86699520-86699539 Msa0480980:intron 40.0%
TTGTTAGGTGCCTAACTTGA+GGG + chr3_3:86699521-86699540 Msa0480980:intron 40.0%
TCATGTATCTCCCTCAAGTT+AGG - chr3_3:86699534-86699553 None:intergenic 40.0%
TGCTTGACTTTCTTCCTGAA+AGG + chr3_3:86699556-86699575 Msa0480980:CDS 40.0%
GACTTTCTTCCTGAAAGGAT+TGG + chr3_3:86699561-86699580 Msa0480980:CDS 40.0%
TGGACATGCATGTTTCTTTG+AGG + chr3_3:86699581-86699600 Msa0480980:CDS 40.0%
! ACATGCATGTTTCTTTGAGG+AGG + chr3_3:86699584-86699603 Msa0480980:CDS 40.0%
AAGCATTCAAACTTAGCCAC+CGG - chr3_3:86699872-86699891 None:intergenic 40.0%
!!! TGTACTTTTCTGGTTCTGTG+AGG - chr3_3:86700263-86700282 None:intergenic 40.0%
AGTAGAATGACATCAGAAGG+GGG - chr3_3:86700309-86700328 None:intergenic 40.0%
GAGTAGAATGACATCAGAAG+GGG - chr3_3:86700310-86700329 None:intergenic 40.0%
! TCATGCTTTTGTTGATGCAG+TGG + chr3_3:86700384-86700403 Msa0480980:intron 40.0%
TTTGTATTCGTTGGAGAGAC+TGG - chr3_3:86700470-86700489 None:intergenic 40.0%
TTATATAGGCCTTGGAAGGA+AGG + chr3_3:86700591-86700610 Msa0480980:intron 40.0%
TCTAGGTACAATGACGTACA+TGG + chr3_3:86700719-86700738 Msa0480980:exon 40.0%
CTAGGTACAATGACGTACAT+GGG + chr3_3:86700720-86700739 Msa0480980:exon 40.0%
TAGGTACAATGACGTACATG+GGG + chr3_3:86700721-86700740 Msa0480980:exon 40.0%
GATGGTGTGGATGTGTATTT+AGG + chr3_3:86700743-86700762 Msa0480980:three_prime_UTR 40.0%
TGCTTACTGGGTATACAGTA+AGG + chr3_3:86700782-86700801 Msa0480980:three_prime_UTR 40.0%
GCTTACTGGGTATACAGTAA+GGG + chr3_3:86700783-86700802 Msa0480980:three_prime_UTR 40.0%
GAGTTAACAAGGTTGTTTGG+GGG + chr3_3:86700839-86700858 Msa0480980:three_prime_UTR 40.0%
GCATTTAACTGGACTGTTCT+TGG + chr3_3:86700919-86700938 Msa0480980:three_prime_UTR 40.0%
TTTAACTGGACTGTTCTTGG+AGG + chr3_3:86700922-86700941 Msa0480980:three_prime_UTR 40.0%
GTTTCAGTGGCTAGTGAAAT+TGG + chr3_3:86700944-86700963 Msa0480980:three_prime_UTR 40.0%
AGTGGCTAGTGAAATTGGAA+TGG + chr3_3:86700949-86700968 Msa0480980:three_prime_UTR 40.0%
CTAGTGAAATTGGAATGGTC+AGG + chr3_3:86700954-86700973 Msa0480980:three_prime_UTR 40.0%
! CAGGTCAAGTGAAGTCATTT+TGG + chr3_3:86700978-86700997 Msa0480980:three_prime_UTR 40.0%
TATTTGACCGCTTGAGATAG+GGG + chr3_3:86701078-86701097 Msa0480980:three_prime_UTR 40.0%
GAATTGCATGCTCACCTCAA+TGG + chr3_3:86697739-86697758 Msa0480980:CDS 45.0%
! AGTCTCTGATGGATCCATTG+AGG - chr3_3:86697756-86697775 None:intergenic 45.0%
!! TTTCCCAGCGAACTTGCTAA+AGG + chr3_3:86697858-86697877 Msa0480980:intron 45.0%
CAAACCTTTAGCAAGTTCGC+TGG - chr3_3:86697865-86697884 None:intergenic 45.0%
!! CAGCGAACTTGCTAAAGGTT+TGG + chr3_3:86697863-86697882 Msa0480980:intron 45.0%
GAGGATAACATGCTGGACTT+GGG - chr3_3:86697913-86697932 None:intergenic 45.0%
TGAGGATAACATGCTGGACT+TGG - chr3_3:86697914-86697933 None:intergenic 45.0%
TTCTCCAGTCTCCACTACAT+GGG - chr3_3:86698090-86698109 None:intergenic 45.0%
ATTAGGTGCGATCTTCTGCT+TGG - chr3_3:86698324-86698343 None:intergenic 45.0%
!! TCAACCGCTTTTGCTAACGT+TGG + chr3_3:86698357-86698376 Msa0480980:intron 45.0%
GAAGTATGTCTGACAGCACT+TGG + chr3_3:86698489-86698508 Msa0480980:intron 45.0%
GTGGCCCAGATTTAATGTCA+CGG - chr3_3:86698606-86698625 None:intergenic 45.0%
TTGTGTGGCCCATATGCAAA+TGG - chr3_3:86698565-86698584 None:intergenic 45.0%
GTACTCATGGATGTGTTGTG+TGG - chr3_3:86698580-86698599 None:intergenic 45.0%
GTGGCCCAGATTTAATGTCA+CGG + chr3_3:86698606-86698625 Msa0480980:intron 45.0%
GACAGTAGGCACTAATCAAG+CGG - chr3_3:86698657-86698676 None:intergenic 45.0%
GGAGTTGAGAACTACTCCAA+AGG + chr3_3:86698774-86698793 Msa0480980:CDS 45.0%
! AGAGCGTTTGCTCATTCCTT+TGG - chr3_3:86698893-86698912 None:intergenic 45.0%
ATCTGTCAGTTCGGTTGATC+TGG + chr3_3:86698942-86698961 Msa0480980:CDS 45.0%
TCTGTCAGTTCGGTTGATCT+GGG + chr3_3:86698943-86698962 Msa0480980:CDS 45.0%
! GTAGCTGAGACTGAGAGTAT+AGG - chr3_3:86699009-86699028 None:intergenic 45.0%
!! GGCTTCTCTTAAGCATTGAC+CGG + chr3_3:86699073-86699092 Msa0480980:CDS 45.0%
!! TTCTCTTAAGCATTGACCGG+AGG + chr3_3:86699076-86699095 Msa0480980:CDS 45.0%
!! TCTCTTAAGCATTGACCGGA+GGG + chr3_3:86699077-86699096 Msa0480980:CDS 45.0%
!!! ATGAGGCATTTTGGGGTTGT+TGG + chr3_3:86699224-86699243 Msa0480980:CDS 45.0%
GTTGTTGGAATTGACCTCTC+TGG + chr3_3:86699239-86699258 Msa0480980:CDS 45.0%
ATATACCATTCACCAACGGC+TGG - chr3_3:86699269-86699288 None:intergenic 45.0%
TGTAACTCTTCACTGTGGAG+AGG + chr3_3:86699424-86699443 Msa0480980:CDS 45.0%
!! ACTAGTGTTGTTTCACTGGC+AGG + chr3_3:86699473-86699492 Msa0480980:intron 45.0%
CATGCATGTCCAATCCTTTC+AGG - chr3_3:86699573-86699592 None:intergenic 45.0%
! GTTTCTTTGAGGAGGAACAC+TGG + chr3_3:86699592-86699611 Msa0480980:CDS 45.0%
CATTTCTACTGATCATCCGG+TGG + chr3_3:86699853-86699872 Msa0480980:intron 45.0%
GGTTCTGTGAGGTTCTTTAG+AGG - chr3_3:86700252-86700271 None:intergenic 45.0%
GTAGAATGACATCAGAAGGG+GGG - chr3_3:86700308-86700327 None:intergenic 45.0%
TCATCAGTACACAGGACTAC+AGG - chr3_3:86700430-86700449 None:intergenic 45.0%
CAAACATCTCCTTCCTTCCA+AGG - chr3_3:86700603-86700622 None:intergenic 45.0%
! AGCAAATGATCTGGAGCTCT+AGG + chr3_3:86700702-86700721 Msa0480980:CDS 45.0%
TACAATGACGTACATGGGGA+TGG + chr3_3:86700725-86700744 Msa0480980:three_prime_UTR 45.0%
TTAACAAGGTTGTTTGGGGG+TGG + chr3_3:86700842-86700861 Msa0480980:three_prime_UTR 45.0%
ACTGTTCTTGGAGGTTTCAG+TGG + chr3_3:86700931-86700950 Msa0480980:three_prime_UTR 45.0%
GAAATTGGAATGGTCAGGTC+AGG + chr3_3:86700959-86700978 Msa0480980:three_prime_UTR 45.0%
ATTTGACCGCTTGAGATAGG+GGG + chr3_3:86701079-86701098 Msa0480980:three_prime_UTR 45.0%
CGCAAGAAAGGAGAGTGAGA+TGG + chr3_3:86697690-86697709 Msa0480980:CDS 50.0%
GAAAGGAGAGTGAGATGGAG+TGG + chr3_3:86697695-86697714 Msa0480980:CDS 50.0%
! CAGAAGTGTGGAGTCTCTGA+TGG - chr3_3:86697767-86697786 None:intergenic 50.0%
! ATAGCCCATGTAGTGGAGAC+TGG + chr3_3:86698083-86698102 Msa0480980:intron 50.0%
CTTCTCCAGTCTCCACTACA+TGG - chr3_3:86698091-86698110 None:intergenic 50.0%
! CATGTAGTGGAGACTGGAGA+AGG + chr3_3:86698089-86698108 Msa0480980:intron 50.0%
GGGCCACACAAATGTACTCA+TGG - chr3_3:86698593-86698612 None:intergenic 50.0%
GCTGTAGGTCATGCTTGCAT+TGG + chr3_3:86699199-86699218 Msa0480980:intron 50.0%
TTGAGGAGGAACACTGGAGA+AGG + chr3_3:86699598-86699617 Msa0480980:CDS 50.0%
! GTCCTGTGTACTGATGACTC+AGG + chr3_3:86700433-86700452 Msa0480980:CDS 50.0%
CACCTGAGTCATCAGTACAC+AGG - chr3_3:86700438-86700457 None:intergenic 50.0%
GTATTCGTTGGAGAGACTGG+TGG - chr3_3:86700467-86700486 None:intergenic 50.0%
TGCGGATAACACGGCAAAAG+AGG + chr3_3:86700654-86700673 Msa0480980:CDS 50.0%
TAAGGGACGCAACTAACTGC+TGG + chr3_3:86700800-86700819 Msa0480980:three_prime_UTR 50.0%
! GGTCTTTTGCCGTGTTGCAT+GGG - chr3_3:86701139-86701158 None:intergenic 50.0%
! AGGTCTTTTGCCGTGTTGCA+TGG - chr3_3:86701140-86701159 None:intergenic 50.0%
CATTGACCGGAGGGAGACAA+CGG + chr3_3:86699086-86699105 Msa0480980:CDS 55.0%
GGAGACAACGGAAGCAGCAA+TGG + chr3_3:86699098-86699117 Msa0480980:CDS 55.0%
! GGAATCCAGCCGTTGGTGAA+TGG + chr3_3:86699261-86699280 Msa0480980:CDS 55.0%
TGACGTACATGGGGATGGTG+TGG + chr3_3:86700730-86700749 Msa0480980:three_prime_UTR 55.0%
TCCTAGCCCCCTATCTCAAG+CGG - chr3_3:86701088-86701107 None:intergenic 55.0%
CTGCTTCCGTTGTCTCCCTC+CGG - chr3_3:86699095-86699114 None:intergenic 60.0%
CAACGGCTGGATTCCCAGAG+AGG - chr3_3:86699256-86699275 None:intergenic 60.0%
! CTCTCTGGGAATCCAGCCGT+TGG + chr3_3:86699254-86699273 Msa0480980:CDS 60.0%
ACCGCTTGAGATAGGGGGCT+AGG + chr3_3:86701084-86701103 Msa0480980:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 86697528 86701258 86697528 ID=Msa0480980;Name=Msa0480980
chr3_3 mRNA 86697528 86701258 86697528 ID=Msa0480980-mRNA-1;Parent=Msa0480980;Name=Msa0480980-mRNA-1;_AED=0.16;_eAED=0.16;_QI=145|1|1|1|1|1|11|535|379
chr3_3 exon 86697528 86697785 86697528 ID=Msa0480980-mRNA-1:exon:25068;Parent=Msa0480980-mRNA-1
chr3_3 exon 86697866 86697936 86697866 ID=Msa0480980-mRNA-1:exon:25069;Parent=Msa0480980-mRNA-1
chr3_3 exon 86698400 86698491 86698400 ID=Msa0480980-mRNA-1:exon:25070;Parent=Msa0480980-mRNA-1
chr3_3 exon 86698736 86698795 86698736 ID=Msa0480980-mRNA-1:exon:25071;Parent=Msa0480980-mRNA-1
chr3_3 exon 86698880 86699125 86698880 ID=Msa0480980-mRNA-1:exon:25072;Parent=Msa0480980-mRNA-1
chr3_3 exon 86699206 86699282 86699206 ID=Msa0480980-mRNA-1:exon:25073;Parent=Msa0480980-mRNA-1
chr3_3 exon 86699376 86699445 86699376 ID=Msa0480980-mRNA-1:exon:25074;Parent=Msa0480980-mRNA-1
chr3_3 exon 86699528 86699641 86699528 ID=Msa0480980-mRNA-1:exon:25075;Parent=Msa0480980-mRNA-1
chr3_3 exon 86699966 86700032 86699966 ID=Msa0480980-mRNA-1:exon:25076;Parent=Msa0480980-mRNA-1
chr3_3 exon 86700404 86700508 86700404 ID=Msa0480980-mRNA-1:exon:25077;Parent=Msa0480980-mRNA-1
chr3_3 exon 86700599 86701258 86700599 ID=Msa0480980-mRNA-1:exon:25078;Parent=Msa0480980-mRNA-1
chr3_3 five_prime_UTR 86697528 86697672 86697528 ID=Msa0480980-mRNA-1:five_prime_utr;Parent=Msa0480980-mRNA-1
chr3_3 CDS 86697673 86697785 86697673 ID=Msa0480980-mRNA-1:cds;Parent=Msa0480980-mRNA-1
chr3_3 CDS 86697866 86697936 86697866 ID=Msa0480980-mRNA-1:cds;Parent=Msa0480980-mRNA-1
chr3_3 CDS 86698400 86698491 86698400 ID=Msa0480980-mRNA-1:cds;Parent=Msa0480980-mRNA-1
chr3_3 CDS 86698736 86698795 86698736 ID=Msa0480980-mRNA-1:cds;Parent=Msa0480980-mRNA-1
chr3_3 CDS 86698880 86699125 86698880 ID=Msa0480980-mRNA-1:cds;Parent=Msa0480980-mRNA-1
chr3_3 CDS 86699206 86699282 86699206 ID=Msa0480980-mRNA-1:cds;Parent=Msa0480980-mRNA-1
chr3_3 CDS 86699376 86699445 86699376 ID=Msa0480980-mRNA-1:cds;Parent=Msa0480980-mRNA-1
chr3_3 CDS 86699528 86699641 86699528 ID=Msa0480980-mRNA-1:cds;Parent=Msa0480980-mRNA-1
chr3_3 CDS 86699966 86700032 86699966 ID=Msa0480980-mRNA-1:cds;Parent=Msa0480980-mRNA-1
chr3_3 CDS 86700404 86700508 86700404 ID=Msa0480980-mRNA-1:cds;Parent=Msa0480980-mRNA-1
chr3_3 CDS 86700599 86700723 86700599 ID=Msa0480980-mRNA-1:cds;Parent=Msa0480980-mRNA-1
chr3_3 three_prime_UTR 86700724 86701258 86700724 ID=Msa0480980-mRNA-1:three_prime_utr;Parent=Msa0480980-mRNA-1
Gene Sequence

>Msa0480980

ATGACCAAGATACAAGACGCAAGAAAGGAGAGTGAGATGGAGTGGTGTATGTCAATTCCAAAGGTAGAATTGCATGCTCACCTCAATGGATCCATCAGAGACTCCACACTTCTCGAACTTGCTAAAGGTTTGGGTGATAAGGATCTCATTGATTTCTCCCAAGTCCAGCATGTTATCCTCAAAAACGATCGTTCATTATCTGAGGTATTCAAGCTGTTTGACGTAATCCACATTCTTACAACTGATCATGCGACGGTTACAAGAATTACGAAAGAAGTTGTTGAAGATTTTGCGTCAGAGAATGTTGTATATGTGGAGTTGAGAACTACTCCAAAGAAAAATGAATCCAAAGGAATGAGCAAACGCTCTTATATTGAAGCTGTACTTGAAGGTCTAAGATCTGTCAGTTCGGTTGATCTGGGTTTTATTCCTTTCAGCGAAGAGATTAAAAACCATTCAAACCCTATACTCTCAGTCTCAGCTACAGATGATAGAAGTAATGAAAATACTAGGAAAAAAATCTTTGTTAGGCTTCTCTTAAGCATTGACCGGAGGGAGACAACGGAAGCAGCAATGGAAACTGTCATGCTTGCATTGGAAATGAGGCATTTTGGGGTTGTTGGAATTGACCTCTCTGGGAATCCAGCCGTTGGTGAATGGGTTACATATTTGCCAGCACTAAAATTTGCTCGAGAACAGGGTCTTTATGTAACTCTTCACTGTGGAGAGGTGCCTAACTTGAGGGAGATACATGATATGCTTGACTTTCTTCCTGAAAGGATTGGACATGCATGTTTCTTTGAGGAGGAACACTGGAGAAGGCTGAAATCGTCTAAAATTCCGGTTGAACTTTGTTTGACATCAAACATTAGGACATTGTCCGTTCCATCAATTGATGCTCATCATTTTGTGGATTTGTATAATGCAAAACATCCTGTAGTCCTGTGTACTGATGACTCAGGTGTGTTCTCCACCAGTCTCTCCAACGAATACAAAATTGCTGCTTCTTCATTTGGCCTTGGAAGGAAGGAGATGTTTGAGCTATCAAAGAATGCTGTTGAATTTATATTTGCGGATAACACGGCAAAAGAGGATTTAAGAAATATTTTTAGTTTAGCAGCAAATGATCTGGAGCTCTAG

Protein sequence

>Msa0480980

MTKIQDARKESEMEWCMSIPKVELHAHLNGSIRDSTLLELAKGLGDKDLIDFSQVQHVILKNDRSLSEVFKLFDVIHILTTDHATVTRITKEVVEDFASENVVYVELRTTPKKNESKGMSKRSYIEAVLEGLRSVSSVDLGFIPFSEEIKNHSNPILSVSATDDRSNENTRKKIFVRLLLSIDRRETTEAAMETVMLALEMRHFGVVGIDLSGNPAVGEWVTYLPALKFAREQGLYVTLHCGEVPNLREIHDMLDFLPERIGHACFFEEEHWRRLKSSKIPVELCLTSNIRTLSVPSIDAHHFVDLYNAKHPVVLCTDDSGVFSTSLSNEYKIAASSFGLGRKEMFELSKNAVEFIFADNTAKEDLRNIFSLAANDLEL*