Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143140 | sp|Q8N8F6|YIPF7_HUMAN | 35.227 | 176 | 110 | 3 | 71 | 245 | 108 | 280 | 7.06e-31 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143140 | G7L626 | 98.367 | 245 | 4 | 0 | 1 | 245 | 1 | 245 | 3.85e-173 | 485 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013050 | Msa0143140 | 0.850188 | 1.996126e-60 | -8.615850e-47 |
| Msa0030380 | Msa0143140 | -0.814301 | 1.651649e-51 | -8.615850e-47 |
| Msa0032840 | Msa0143140 | 0.807507 | 4.886783e-50 | -8.615850e-47 |
| Msa0038350 | Msa0143140 | 0.804234 | 2.382465e-49 | -8.615850e-47 |
| Msa0040450 | Msa0143140 | -0.820318 | 7.306567e-53 | -8.615850e-47 |
| Msa0044710 | Msa0143140 | -0.824094 | 9.722154e-54 | -8.615850e-47 |
| Msa0046660 | Msa0143140 | 0.829810 | 4.180405e-55 | -8.615850e-47 |
| Msa0049650 | Msa0143140 | 0.821903 | 3.152650e-53 | -8.615850e-47 |
| Msa0054730 | Msa0143140 | 0.816644 | 4.971371e-52 | -8.615850e-47 |
| Msa0083310 | Msa0143140 | -0.801916 | 7.182709e-49 | -8.615850e-47 |
| Msa0091770 | Msa0143140 | -0.806473 | 8.087571e-50 | -8.615850e-47 |
| Msa0095380 | Msa0143140 | -0.815861 | 7.441047e-52 | -8.615850e-47 |
| Msa0098370 | Msa0143140 | -0.806378 | 8.467018e-50 | -8.615850e-47 |
| Msa0101710 | Msa0143140 | -0.801533 | 8.611172e-49 | -8.615850e-47 |
| Msa0106370 | Msa0143140 | 0.828726 | 7.657249e-55 | -8.615850e-47 |
| Msa0106670 | Msa0143140 | -0.809219 | 2.107919e-50 | -8.615850e-47 |
| Msa0111310 | Msa0143140 | -0.805795 | 1.123341e-49 | -8.615850e-47 |
| Msa0119850 | Msa0143140 | -0.831039 | 2.091873e-55 | -8.615850e-47 |
| Msa0129790 | Msa0143140 | 0.803311 | 3.704383e-49 | -8.615850e-47 |
| Msa0140390 | Msa0143140 | -0.809065 | 2.274633e-50 | -8.615850e-47 |
| Msa0143140 | Msa0156650 | 0.848191 | 7.171083e-60 | -8.615850e-47 |
| Msa0143140 | Msa0160550 | -0.804007 | 2.656345e-49 | -8.615850e-47 |
| Msa0143140 | Msa0162770 | 0.801130 | 1.040829e-48 | -8.615850e-47 |
| Msa0143140 | Msa0173740 | -0.818592 | 1.808662e-52 | -8.615850e-47 |
| Msa0143140 | Msa0173820 | -0.814243 | 1.701497e-51 | -8.615850e-47 |
| Msa0143140 | Msa0173830 | -0.800528 | 1.381756e-48 | -8.615850e-47 |
| Msa0143140 | Msa0182930 | -0.811416 | 7.078339e-51 | -8.615850e-47 |
| Msa0143140 | Msa0185640 | 0.809113 | 2.221574e-50 | -8.615850e-47 |
| Msa0143140 | Msa0187070 | -0.824637 | 7.247168e-54 | -8.615850e-47 |
| Msa0143140 | Msa0188680 | 0.803269 | 3.778521e-49 | -8.615850e-47 |
| Msa0143140 | Msa0193120 | -0.814496 | 1.495402e-51 | -8.615850e-47 |
| Msa0143140 | Msa0196130 | 0.814093 | 1.836320e-51 | -8.615850e-47 |
| Msa0143140 | Msa0200950 | 0.835156 | 1.977021e-56 | -8.615850e-47 |
| Msa0143140 | Msa0208630 | -0.816118 | 6.520929e-52 | -8.615850e-47 |
| Msa0143140 | Msa0212310 | -0.803288 | 3.744172e-49 | -8.615850e-47 |
| Msa0143140 | Msa0215320 | 0.813524 | 2.451088e-51 | -8.615850e-47 |
| Msa0143140 | Msa0223410 | 0.808876 | 2.496584e-50 | -8.615850e-47 |
| Msa0143140 | Msa0229490 | 0.801648 | 8.153752e-49 | -8.615850e-47 |
| Msa0143140 | Msa0238070 | 0.847870 | 8.794117e-60 | -8.615850e-47 |
| Msa0143140 | Msa0238250 | 0.818073 | 2.371219e-52 | -8.615850e-47 |
| Msa0143140 | Msa0246430 | -0.809479 | 1.854487e-50 | -8.615850e-47 |
| Msa0143140 | Msa0257240 | 0.802118 | 6.529292e-49 | -8.615850e-47 |
| Msa0143140 | Msa0258670 | 0.832920 | 7.175270e-56 | -8.615850e-47 |
| Msa0143140 | Msa0260950 | 0.833768 | 4.411208e-56 | -8.615850e-47 |
| Msa0143140 | Msa0267760 | -0.802473 | 5.517508e-49 | -8.615850e-47 |
| Msa0143140 | Msa0270270 | -0.809802 | 1.580462e-50 | -8.615850e-47 |
| Msa0143140 | Msa0272480 | 0.807040 | 6.138169e-50 | -8.615850e-47 |
| Msa0143140 | Msa0272690 | -0.810417 | 1.164895e-50 | -8.615850e-47 |
| Msa0143140 | Msa0279790 | -0.830238 | 3.286080e-55 | -8.615850e-47 |
| Msa0143140 | Msa0280900 | -0.821424 | 4.067447e-53 | -8.615850e-47 |
| Msa0143140 | Msa0288240 | -0.819410 | 1.178441e-52 | -8.615850e-47 |
| Msa0143140 | Msa0288330 | -0.800341 | 1.508411e-48 | -8.615850e-47 |
| Msa0143140 | Msa0294560 | 0.842034 | 3.308366e-58 | -8.615850e-47 |
| Msa0143140 | Msa0312690 | 0.821260 | 4.437094e-53 | -8.615850e-47 |
| Msa0143140 | Msa0318250 | -0.821071 | 4.905587e-53 | -8.615850e-47 |
| Msa0143140 | Msa0320100 | -0.831221 | 1.887085e-55 | -8.615850e-47 |
| Msa0143140 | Msa0321860 | -0.814216 | 1.725242e-51 | -8.615850e-47 |
| Msa0143140 | Msa0326670 | -0.836264 | 1.035962e-56 | -8.615850e-47 |
| Msa0143140 | Msa0333720 | 0.841415 | 4.817075e-58 | -8.615850e-47 |
| Msa0143140 | Msa0342340 | 0.803869 | 2.837837e-49 | -8.615850e-47 |
| Msa0143140 | Msa0344830 | -0.819622 | 1.054538e-52 | -8.615850e-47 |
| Msa0143140 | Msa0350990 | -0.806121 | 9.594898e-50 | -8.615850e-47 |
| Msa0143140 | Msa0351030 | -0.800521 | 1.386255e-48 | -8.615850e-47 |
| Msa0143140 | Msa0358170 | -0.848579 | 5.601274e-60 | -8.615850e-47 |
| Msa0143140 | Msa0373930 | -0.824045 | 9.983666e-54 | -8.615850e-47 |
| Msa0143140 | Msa0376510 | -0.816664 | 4.921749e-52 | -8.615850e-47 |
| Msa0143140 | Msa0377400 | -0.824493 | 7.832794e-54 | -8.615850e-47 |
| Msa0143140 | Msa0378080 | -0.811084 | 8.355333e-51 | -8.615850e-47 |
| Msa0143140 | Msa0380040 | -0.830301 | 3.172522e-55 | -8.615850e-47 |
| Msa0143140 | Msa0390400 | 0.819982 | 8.724186e-53 | -8.615850e-47 |
| Msa0143140 | Msa0414950 | 0.852946 | 3.306296e-61 | -8.615850e-47 |
| Msa0143140 | Msa0419820 | -0.830988 | 2.152812e-55 | -8.615850e-47 |
| Msa0143140 | Msa0421780 | 0.830764 | 2.443411e-55 | -8.615850e-47 |
| Msa0143140 | Msa0423360 | 0.809410 | 1.918378e-50 | -8.615850e-47 |
| Msa0143140 | Msa0424920 | -0.809809 | 1.574558e-50 | -8.615850e-47 |
| Msa0143140 | Msa0425050 | -0.813248 | 2.817458e-51 | -8.615850e-47 |
| Msa0143140 | Msa0429290 | -0.836783 | 7.642198e-57 | -8.615850e-47 |
| Msa0143140 | Msa0430620 | -0.807531 | 4.829974e-50 | -8.615850e-47 |
| Msa0143140 | Msa0432770 | -0.811642 | 6.322535e-51 | -8.615850e-47 |
| Msa0143140 | Msa0436280 | 0.819068 | 1.410333e-52 | -8.615850e-47 |
| Msa0143140 | Msa0442850 | -0.830745 | 2.469939e-55 | -8.615850e-47 |
| Msa0143140 | Msa0459770 | 0.872116 | 4.071344e-67 | -8.615850e-47 |
| Msa0143140 | Msa0465790 | -0.839370 | 1.650605e-57 | -8.615850e-47 |
| Msa0143140 | Msa0467900 | 0.800678 | 1.287454e-48 | -8.615850e-47 |
| Msa0143140 | Msa0467960 | 0.828646 | 8.008666e-55 | -8.615850e-47 |
| Msa0143140 | Msa0470180 | -0.805391 | 1.365356e-49 | -8.615850e-47 |
| Msa0143140 | Msa0475580 | -0.826791 | 2.235028e-54 | -8.615850e-47 |
| Msa0143140 | Msa0480000 | -0.801975 | 6.985166e-49 | -8.615850e-47 |
| Msa0143140 | Msa0480980 | -0.853047 | 3.093460e-61 | -8.615850e-47 |
| Msa0143140 | Msa0500360 | -0.830009 | 3.737178e-55 | -8.615850e-47 |
| Msa0143140 | Msa0509390 | -0.813768 | 2.165904e-51 | -8.615850e-47 |
| Msa0143140 | Msa0516320 | -0.809081 | 2.256342e-50 | -8.615850e-47 |
| Msa0143140 | Msa0518040 | -0.814741 | 1.319871e-51 | -8.615850e-47 |
| Msa0143140 | Msa0519220 | -0.817255 | 3.625071e-52 | -8.615850e-47 |
| Msa0143140 | Msa0524890 | 0.818568 | 1.831854e-52 | -8.615850e-47 |
| Msa0143140 | Msa0526640 | 0.809046 | 2.295921e-50 | -8.615850e-47 |
| Msa0143140 | Msa0526710 | -0.809199 | 2.129660e-50 | -8.615850e-47 |
| Msa0143140 | Msa0535030 | -0.823997 | 1.024438e-53 | -8.615850e-47 |
| Msa0143140 | Msa0535060 | -0.825301 | 5.050254e-54 | -8.615850e-47 |
| Msa0143140 | Msa0540070 | -0.806442 | 8.211390e-50 | -8.615850e-47 |
| Msa0143140 | Msa0547140 | -0.803439 | 3.484786e-49 | -8.615850e-47 |
| Msa0143140 | Msa0548280 | 0.815376 | 9.541820e-52 | -8.615850e-47 |
| Msa0143140 | Msa0553220 | 0.845317 | 4.378540e-59 | -8.615850e-47 |
| Msa0143140 | Msa0561540 | 0.823478 | 1.355375e-53 | -8.615850e-47 |
| Msa0143140 | Msa0568820 | -0.802487 | 5.480582e-49 | -8.615850e-47 |
| Msa0143140 | Msa0577940 | 0.817677 | 2.912575e-52 | -8.615850e-47 |
| Msa0143140 | Msa0581760 | -0.841687 | 4.084504e-58 | -8.615850e-47 |
| Msa0143140 | Msa0584860 | -0.818598 | 1.803164e-52 | -8.615850e-47 |
| Msa0143140 | Msa0585000 | 0.849274 | 3.591137e-60 | -8.615850e-47 |
| Msa0143140 | Msa0587690 | -0.801191 | 1.011611e-48 | -8.615850e-47 |
| Msa0143140 | Msa0591060 | -0.820134 | 8.053796e-53 | -8.615850e-47 |
| Msa0143140 | Msa0591770 | -0.836075 | 1.156924e-56 | -8.615850e-47 |
| Msa0143140 | Msa0601850 | -0.809595 | 1.750494e-50 | -8.615850e-47 |
| Msa0143140 | Msa0602250 | -0.804209 | 2.411408e-49 | -8.615850e-47 |
| Msa0143140 | Msa0605170 | -0.811600 | 6.454704e-51 | -8.615850e-47 |
| Msa0143140 | Msa0607200 | -0.811267 | 7.623776e-51 | -8.615850e-47 |
| Msa0143140 | Msa0607340 | 0.825952 | 3.540565e-54 | -8.615850e-47 |
| Msa0143140 | Msa0618010 | -0.824210 | 9.130986e-54 | -8.615850e-47 |
| Msa0143140 | Msa0619070 | -0.801801 | 7.586233e-49 | -8.615850e-47 |
| Msa0143140 | Msa0621590 | -0.824648 | 7.201781e-54 | -8.615850e-47 |
| Msa0143140 | Msa0623080 | -0.801284 | 9.681463e-49 | -8.615850e-47 |
| Msa0143140 | Msa0625530 | 0.824655 | 7.177221e-54 | -8.615850e-47 |
| Msa0143140 | Msa0629370 | -0.820963 | 5.195580e-53 | -8.615850e-47 |
| Msa0143140 | Msa0638280 | -0.856614 | 2.856634e-62 | -8.615850e-47 |
| Msa0143140 | Msa0638320 | -0.857854 | 1.228983e-62 | -8.615850e-47 |
| Msa0143140 | Msa0646640 | -0.815371 | 9.565210e-52 | -8.615850e-47 |
| Msa0143140 | Msa0647450 | 0.854589 | 1.112773e-61 | -8.615850e-47 |
| Msa0143140 | Msa0654760 | 0.840194 | 1.007136e-57 | -8.615850e-47 |
| Msa0143140 | Msa0657670 | -0.815456 | 9.161793e-52 | -8.615850e-47 |
| Msa0143140 | Msa0661190 | 0.861010 | 1.384993e-63 | -8.615850e-47 |
| Msa0143140 | Msa0669850 | -0.830737 | 2.480690e-55 | -8.615850e-47 |
| Msa0143140 | Msa0672120 | -0.826578 | 2.512361e-54 | -8.615850e-47 |
| Msa0143140 | Msa0677270 | -0.853345 | 2.540362e-61 | -8.615850e-47 |
| Msa0143140 | Msa0698920 | -0.800283 | 1.550039e-48 | -8.615850e-47 |
| Msa0143140 | Msa0714560 | 0.805195 | 1.501075e-49 | -8.615850e-47 |
| Msa0143140 | Msa0716840 | -0.803196 | 3.912396e-49 | -8.615850e-47 |
| Msa0143140 | Msa0725480 | 0.802754 | 4.828510e-49 | -8.615850e-47 |
| Msa0143140 | Msa0743260 | -0.809351 | 1.975672e-50 | -8.615850e-47 |
| Msa0143140 | Msa0743720 | -0.811029 | 8.589429e-51 | -8.615850e-47 |
| Msa0143140 | Msa0754720 | 0.808623 | 2.827861e-50 | -8.615850e-47 |
| Msa0143140 | Msa0756630 | 0.843045 | 1.783365e-58 | -8.615850e-47 |
| Msa0143140 | Msa0795050 | -0.816802 | 4.583485e-52 | -8.615850e-47 |
| Msa0143140 | Msa0795090 | -0.837131 | 6.227253e-57 | -8.615850e-47 |
| Msa0143140 | Msa0795920 | -0.801906 | 7.217876e-49 | -8.615850e-47 |
| Msa0143140 | Msa0802470 | 0.805963 | 1.035623e-49 | -8.615850e-47 |
| Msa0143140 | Msa0813320 | 0.821551 | 3.801418e-53 | -8.615850e-47 |
| Msa0143140 | Msa0813670 | -0.804183 | 2.440627e-49 | -8.615850e-47 |
| Msa0143140 | Msa0813720 | -0.828558 | 8.411346e-55 | -8.615850e-47 |
| Msa0143140 | Msa0824680 | -0.818450 | 1.947721e-52 | -8.615850e-47 |
| Msa0143140 | Msa0831870 | -0.803724 | 3.041345e-49 | -8.615850e-47 |
| Msa0143140 | Msa0845590 | 0.813535 | 2.437059e-51 | -8.615850e-47 |
| Msa0143140 | Msa0850960 | -0.811480 | 6.854983e-51 | -8.615850e-47 |
| Msa0143140 | Msa0853540 | -0.808986 | 2.365285e-50 | -8.615850e-47 |
| Msa0143140 | Msa0867050 | 0.834453 | 2.970997e-56 | -8.615850e-47 |
| Msa0143140 | Msa0878500 | -0.812567 | 3.973343e-51 | -8.615850e-47 |
| Msa0143140 | Msa0930460 | 0.811365 | 7.261761e-51 | -8.615850e-47 |
| Msa0143140 | Msa0932780 | 0.831002 | 2.136081e-55 | -8.615850e-47 |
| Msa0143140 | Msa0944190 | -0.817164 | 3.800749e-52 | -8.615850e-47 |
| Msa0143140 | Msa0970570 | 0.815689 | 8.129101e-52 | -8.615850e-47 |
| Msa0143140 | Msa0980500 | -0.802975 | 4.346841e-49 | -8.615850e-47 |
| Msa0143140 | Msa0992490 | 0.831415 | 1.690781e-55 | -8.615850e-47 |
| Msa0143140 | Msa1003310 | -0.803001 | 4.292276e-49 | -8.615850e-47 |
| Msa0143140 | Msa1004900 | 0.836932 | 7.003113e-57 | -8.615850e-47 |
| Msa0143140 | Msa1007610 | 0.829140 | 6.081903e-55 | -8.615850e-47 |
| Msa0143140 | Msa1023400 | -0.835564 | 1.559269e-56 | -8.615850e-47 |
| Msa0143140 | Msa1036390 | -0.801729 | 7.848719e-49 | -8.615850e-47 |
| Msa0143140 | Msa1072460 | 0.834575 | 2.768293e-56 | -8.615850e-47 |
| Msa0143140 | Msa1075220 | 0.822078 | 2.871571e-53 | -8.615850e-47 |
| Msa0143140 | Msa1081820 | -0.830369 | 3.053407e-55 | -8.615850e-47 |
| Msa0143140 | Msa1087710 | -0.809915 | 1.494146e-50 | -8.615850e-47 |
| Msa0143140 | Msa1114710 | -0.800260 | 1.566568e-48 | -8.615850e-47 |
| Msa0143140 | Msa1116130 | 0.836589 | 8.563654e-57 | -8.615850e-47 |
| Msa0143140 | Msa1121450 | 0.800607 | 1.331598e-48 | -8.615850e-47 |
| Msa0143140 | Msa1139000 | 0.804963 | 1.678363e-49 | -8.615850e-47 |
| Msa0143140 | Msa1143930 | 0.838143 | 3.424984e-57 | -8.615850e-47 |
| Msa0143140 | Msa1147900 | -0.806164 | 9.396748e-50 | -8.615850e-47 |
| Msa0143140 | Msa1162550 | 0.804493 | 2.103636e-49 | -8.615850e-47 |
| Msa0143140 | Msa1171690 | -0.800598 | 1.336957e-48 | -8.615850e-47 |
| Msa0143140 | Msa1171870 | -0.802840 | 4.634559e-49 | -8.615850e-47 |
| Msa0143140 | Msa1174010 | -0.801715 | 7.900648e-49 | -8.615850e-47 |
| Msa0143140 | Msa1200880 | 0.805651 | 1.204553e-49 | -8.615850e-47 |
| Msa0143140 | Msa1204980 | 0.805911 | 1.061840e-49 | -8.615850e-47 |
| Msa0143140 | Msa1205010 | 0.820520 | 6.568771e-53 | -8.615850e-47 |
| Msa0143140 | Msa1217430 | 0.808027 | 3.788596e-50 | -8.615850e-47 |
| Msa0143140 | Msa1222970 | -0.835141 | 1.994551e-56 | -8.615850e-47 |
| Msa0143140 | Msa1226660 | -0.805084 | 1.583137e-49 | -8.615850e-47 |
| Msa0143140 | Msa1233890 | -0.817991 | 2.474236e-52 | -8.615850e-47 |
| Msa0143140 | Msa1246740 | -0.803577 | 3.262786e-49 | -8.615850e-47 |
| Msa0143140 | Msa1247250 | -0.805148 | 1.534985e-49 | -8.615850e-47 |
| Msa0143140 | Msa1253930 | 0.834681 | 2.603842e-56 | -8.615850e-47 |
| Msa0143140 | Msa1264020 | -0.846641 | 1.911780e-59 | -8.615850e-47 |
| Msa0143140 | Msa1269580 | 0.815500 | 8.957170e-52 | -8.615850e-47 |
| Msa0143140 | Msa1275360 | -0.809217 | 2.109867e-50 | -8.615850e-47 |
| Msa0143140 | Msa1280130 | -0.807853 | 4.126498e-50 | -8.615850e-47 |
| Msa0143140 | Msa1284220 | -0.822317 | 2.527552e-53 | -8.615850e-47 |
| Msa0143140 | Msa1288420 | -0.809105 | 2.229870e-50 | -8.615850e-47 |
| Msa0143140 | Msa1296960 | 0.810221 | 1.283703e-50 | -8.615850e-47 |
| Msa0143140 | Msa1302190 | 0.816701 | 4.828048e-52 | -8.615850e-47 |
| Msa0143140 | Msa1306430 | -0.807534 | 4.822409e-50 | -8.615850e-47 |
| Msa0143140 | Msa1307660 | 0.852123 | 5.673241e-61 | -8.615850e-47 |
| Msa0143140 | Msa1332040 | 0.827126 | 1.858602e-54 | -8.615850e-47 |
| Msa0143140 | Msa1335860 | -0.823083 | 1.676571e-53 | -8.615850e-47 |
| Msa0143140 | Msa1348490 | -0.811959 | 5.393546e-51 | -8.615850e-47 |
| Msa0143140 | Msa1351620 | -0.834789 | 2.445483e-56 | -8.615850e-47 |
| Msa0143140 | Msa1357530 | -0.810947 | 8.947560e-51 | -8.615850e-47 |
| Msa0143140 | Msa1358610 | 0.801593 | 8.369949e-49 | -8.615850e-47 |
| Msa0143140 | Msa1358870 | 0.806542 | 7.819211e-50 | -8.615850e-47 |
| Msa0143140 | Msa1362880 | -0.806162 | 9.403124e-50 | -8.615850e-47 |
| Msa0143140 | Msa1367080 | -0.852663 | 3.982178e-61 | -8.615850e-47 |
| Msa0143140 | Msa1369530 | -0.817670 | 2.923261e-52 | -8.615850e-47 |
| Msa0143140 | Msa1371430 | -0.800571 | 1.353823e-48 | -8.615850e-47 |
| Msa0143140 | Msa1386110 | 0.934347 | 4.648679e-96 | -8.615850e-47 |
| Msa0143140 | Msa1395230 | 0.833655 | 4.708483e-56 | -8.615850e-47 |
| Msa0143140 | Msa1396750 | 0.821704 | 3.505270e-53 | -8.615850e-47 |
| Msa0143140 | Msa1403930 | 0.819589 | 1.072790e-52 | -8.615850e-47 |
| Msa0143140 | Msa1410430 | 0.832888 | 7.311001e-56 | -8.615850e-47 |
| Msa0143140 | Msa1411070 | -0.822427 | 2.383162e-53 | -8.615850e-47 |
| Msa0143140 | Msa1416150 | -0.818470 | 1.928038e-52 | -8.615850e-47 |
| Msa0143140 | Msa1419800 | 0.951293 | 2.771537e-109 | -8.615850e-47 |
| Msa0143140 | Msa1426030 | -0.835922 | 1.265666e-56 | -8.615850e-47 |
| Msa0143140 | Msa1427660 | 0.939625 | 9.271540e-100 | -8.615850e-47 |
| Msa0143140 | Msa1427830 | -0.803152 | 3.995313e-49 | -8.615850e-47 |
| Msa0143140 | Msa1429150 | -0.810141 | 1.336106e-50 | -8.615850e-47 |
| Msa0143140 | Msa1429360 | 0.820539 | 6.503502e-53 | -8.615850e-47 |
| Msa0143140 | Msa1445610 | 0.803673 | 3.115456e-49 | -8.615850e-47 |
| Msa0143140 | Msa1449250 | 0.835276 | 1.844219e-56 | -8.615850e-47 |
| Msa0143140 | Msa1453780 | 0.830606 | 2.672177e-55 | -8.615850e-47 |
| Msa0143140 | Msa1454910 | 0.826751 | 2.283992e-54 | -8.615850e-47 |
| Msa0143140 | Msa1455490 | -0.808805 | 2.585912e-50 | -8.615850e-47 |
| Msa0143140 | Msa1461250 | 0.816993 | 4.151475e-52 | -8.615850e-47 |
| Msa0143140 | Msa1464830 | -0.808649 | 2.792340e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143140 | MtrunA17_Chr7g0266171 | 98.367 | 245 | 4 | 0 | 1 | 245 | 1 | 245 | 7.41e-177 | 485 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143140 | AT3G52760.1 | 68.872 | 257 | 68 | 4 | 1 | 245 | 1 | 257 | 2.74e-122 | 348 |
| Msa0143140 | AT2G36300.1 | 67.300 | 263 | 60 | 5 | 1 | 245 | 1 | 255 | 2.29e-114 | 328 |
Find 69 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCACATGGTGGTTTCTT+TGG | 0.086528 | 1_4:+2071813 | Msa0143140:CDS |
| TGCGGGTCGAACTGGAAATT+TGG | 0.234078 | 1_4:+2071716 | Msa0143140:CDS |
| TTCCACATGGTGGTTTCTTT+GGG | 0.250135 | 1_4:+2071814 | Msa0143140:CDS |
| GGAACCACCACCGCCGATTC+CGG | 0.282867 | 1_4:-2071436 | None:intergenic |
| GAACCACCACCGCCGATTCC+GGG | 0.362735 | 1_4:-2071435 | None:intergenic |
| GTATTCATCCGGATCAAATC+TGG | 0.368693 | 1_4:+2071499 | Msa0143140:CDS |
| AACGCCATATAGAGAAGAAT+TGG | 0.368721 | 1_4:-2071594 | None:intergenic |
| TGGTCCAATTCTTCTCTATA+TGG | 0.369922 | 1_4:+2071590 | Msa0143140:CDS |
| CATACTTGTACCAGTGTTGT+TGG | 0.376301 | 1_4:+2071744 | Msa0143140:CDS |
| AACATGCTTGCGGGTCGAAC+TGG | 0.383114 | 1_4:+2071708 | Msa0143140:CDS |
| CGGTATGGTTCACGCGAAAC+GGG | 0.383392 | 1_4:-2071545 | None:intergenic |
| CTCCTCGTCGTCGAAGTTAA+CGG | 0.422501 | 1_4:-2071457 | None:intergenic |
| TTTGGTTGGAACGGTGGTAT+TGG | 0.423341 | 1_4:-2071336 | None:intergenic |
| ATGAAAGGGATGCCGGAGTT+TGG | 0.440296 | 1_4:-2071354 | None:intergenic |
| ACGGTATGGTTCACGCGAAA+CGG | 0.443655 | 1_4:-2071546 | None:intergenic |
| ATCTACTCTGGTCCCGGAAT+CGG | 0.456452 | 1_4:+2071423 | Msa0143140:CDS |
| CTTGTGGTTTCTCTTACTGA+TGG | 0.457923 | 1_4:+2071888 | Msa0143140:CDS |
| GGTCCCGGAATCGGCGGTGG+TGG | 0.458366 | 1_4:+2071432 | Msa0143140:CDS |
| TGGACCGGAGGAGGTGGAAA+CGG | 0.462451 | 1_4:-2071400 | None:intergenic |
| CACAAAGACGCTGATCTCTC+TGG | 0.477534 | 1_4:+2071570 | Msa0143140:CDS |
| GGAGGAGGTGGAAACGGCGG+CGG | 0.482053 | 1_4:-2071394 | None:intergenic |
| CCGACGGAGGCGAAGGATAC+CGG | 0.487942 | 1_4:-2071276 | None:intergenic |
| ATTCCGGGACCAGAGTAGAT+TGG | 0.488100 | 1_4:-2071420 | None:intergenic |
| TGGGCTACTAGAGCTTCAAC+GGG | 0.501360 | 1_4:+2071864 | Msa0143140:CDS |
| CGATGTCAAATGACATGAAA+GGG | 0.504894 | 1_4:-2071368 | None:intergenic |
| CCGGTATCCTTCGCCTCCGT+CGG | 0.505190 | 1_4:+2071276 | Msa0143140:CDS |
| TCTGGTCCCGGAATCGGCGG+TGG | 0.508217 | 1_4:+2071429 | Msa0143140:CDS |
| GTAGATTGGACCGGAGGAGG+TGG | 0.509987 | 1_4:-2071406 | None:intergenic |
| GCCGCCGTTTCCACCTCCTC+CGG | 0.518829 | 1_4:+2071396 | Msa0143140:CDS |
| ATGCCGGAGTTTGGTTGGAA+CGG | 0.525630 | 1_4:-2071345 | None:intergenic |
| TAGAGCTTCAACGGGGCTTG+TGG | 0.525930 | 1_4:+2071872 | Msa0143140:CDS |
| GGGGTTACCGACGGAGGCGA+AGG | 0.531653 | 1_4:-2071283 | None:intergenic |
| AAGGGATGCCGGAGTTTGGT+TGG | 0.532020 | 1_4:-2071350 | None:intergenic |
| CGACGAGCTCGGTATTCATC+CGG | 0.535700 | 1_4:+2071488 | Msa0143140:CDS |
| ATACCGAGCTCGTCGAGAAG+AGG | 0.537974 | 1_4:-2071480 | None:intergenic |
| GGTCCAATCTACTCTGGTCC+CGG | 0.538685 | 1_4:+2071417 | Msa0143140:CDS |
| CAGCGTCTTTGTGAACGGTA+TGG | 0.542374 | 1_4:-2071560 | None:intergenic |
| CCTTTCATGTCATTTGACAT+CGG | 0.544673 | 1_4:+2071369 | Msa0143140:CDS |
| TTGTCCGGCGGGGTTACCGA+CGG | 0.546984 | 1_4:-2071292 | None:intergenic |
| ATGGGCTACTAGAGCTTCAA+CGG | 0.549815 | 1_4:+2071863 | Msa0143140:CDS |
| TACTCTGGTCCCGGAATCGG+CGG | 0.561190 | 1_4:+2071426 | Msa0143140:CDS |
| TGTCTCTTTCAATTACTCGC+CGG | 0.564214 | 1_4:+2071618 | Msa0143140:CDS |
| GAGCCTCTTCTCGACGAGCT+CGG | 0.565975 | 1_4:+2071477 | Msa0143140:CDS |
| AAATGACATGAAAGGGATGC+CGG | 0.570013 | 1_4:-2071361 | None:intergenic |
| GCCTCCGTCGGTAACCCCGC+CGG | 0.572655 | 1_4:+2071288 | Msa0143140:CDS |
| TCCTCCGGTCCAATCTACTC+TGG | 0.574768 | 1_4:+2071411 | Msa0143140:CDS |
| AGAGTAGATTGGACCGGAGG+AGG | 0.576450 | 1_4:-2071409 | None:intergenic |
| CCGGAGTTTGGTTGGAACGG+TGG | 0.579512 | 1_4:-2071342 | None:intergenic |
| CCACCGTTCCAACCAAACTC+CGG | 0.614609 | 1_4:+2071342 | Msa0143140:CDS |
| GGGACCAGAGTAGATTGGAC+CGG | 0.616175 | 1_4:-2071415 | None:intergenic |
| GAGATCAGCGTCTTTGTGAA+CGG | 0.616493 | 1_4:-2071565 | None:intergenic |
| TGGTTATTCTATGTTGCCAG+TGG | 0.618449 | 1_4:+2071764 | Msa0143140:CDS |
| GGAACGGTGGTATTGGTACA+CGG | 0.619478 | 1_4:-2071329 | None:intergenic |
| CCGATGTCAAATGACATGAA+AGG | 0.627556 | 1_4:-2071369 | None:intergenic |
| GAAAGAATTCAAAGTCCCAC+CGG | 0.628112 | 1_4:+2071257 | Msa0143140:CDS |
| TCCGGCGGGGTTACCGACGG+AGG | 0.630208 | 1_4:-2071289 | None:intergenic |
| ACCAGAGTAGATTGGACCGG+AGG | 0.633247 | 1_4:-2071412 | None:intergenic |
| ACGGAGGCGAAGGATACCGG+TGG | 0.636258 | 1_4:-2071273 | None:intergenic |
| CATAGAATAACCAACAACAC+TGG | 0.637689 | 1_4:-2071754 | None:intergenic |
| TTCCGTTAACTTCGACGACG+AGG | 0.637706 | 1_4:+2071455 | Msa0143140:CDS |
| ATTGCAGAGAAAATCACCAC+TGG | 0.645448 | 1_4:-2071780 | None:intergenic |
| ACCGGAGGAGGTGGAAACGG+CGG | 0.648522 | 1_4:-2071397 | None:intergenic |
| AATCTGGAGCAAAATCAGAT+CGG | 0.650716 | 1_4:+2071515 | Msa0143140:CDS |
| AGCCCAAAGAAACCACCATG+TGG | 0.671114 | 1_4:-2071816 | None:intergenic |
| CGGAGGCGAAGGATACCGGT+GGG | 0.687481 | 1_4:-2071272 | None:intergenic |
| ATGGCTGTGATGAACATCGT+GGG | 0.690522 | 1_4:+2071907 | Msa0143140:CDS |
| GATGGCTGTGATGAACATCG+TGG | 0.761743 | 1_4:+2071906 | Msa0143140:CDS |
| GGGCTACTAGAGCTTCAACG+GGG | 0.801660 | 1_4:+2071865 | Msa0143140:CDS |
| ACGGTGGTATTGGTACACGG+CGG | 0.809815 | 1_4:-2071326 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCAATTCGGTGTGATTTT+AGG | + | chr1_4:2071645-2071664 | Msa0143140:CDS | 30.0% |
| CGATGTCAAATGACATGAAA+GGG | - | chr1_4:2071371-2071390 | None:intergenic | 35.0% | |
| ! | CCTTTCATGTCATTTGACAT+CGG | + | chr1_4:2071369-2071388 | Msa0143140:CDS | 35.0% |
| ! | ATTTTGCTCCAGATTTGATC+CGG | - | chr1_4:2071510-2071529 | None:intergenic | 35.0% |
| ! | AATCTGGAGCAAAATCAGAT+CGG | + | chr1_4:2071515-2071534 | Msa0143140:CDS | 35.0% |
| TGGTCCAATTCTTCTCTATA+TGG | + | chr1_4:2071590-2071609 | Msa0143140:CDS | 35.0% | |
| AACGCCATATAGAGAAGAAT+TGG | - | chr1_4:2071597-2071616 | None:intergenic | 35.0% | |
| ! | CACACCGAATTGAATTTTTC+CGG | - | chr1_4:2071640-2071659 | None:intergenic | 35.0% |
| !!! | AATTCGGTGTGATTTTAGGT+TGG | + | chr1_4:2071649-2071668 | Msa0143140:CDS | 35.0% |
| CATAGAATAACCAACAACAC+TGG | - | chr1_4:2071757-2071776 | None:intergenic | 35.0% | |
| !!! | ATATCGCTTTTTCTTCCACA+TGG | + | chr1_4:2071801-2071820 | Msa0143140:CDS | 35.0% |
| GAAAGAATTCAAAGTCCCAC+CGG | + | chr1_4:2071257-2071276 | Msa0143140:CDS | 40.0% | |
| !! | TTTTGAAGATTTTGTCCGGC+GGG | - | chr1_4:2071306-2071325 | None:intergenic | 40.0% |
| !!! | GTTTTGAAGATTTTGTCCGG+CGG | - | chr1_4:2071307-2071326 | None:intergenic | 40.0% |
| !!! | GCGGTTTTGAAGATTTTGTC+CGG | - | chr1_4:2071310-2071329 | None:intergenic | 40.0% |
| AAATGACATGAAAGGGATGC+CGG | - | chr1_4:2071364-2071383 | None:intergenic | 40.0% | |
| CCGATGTCAAATGACATGAA+AGG | - | chr1_4:2071372-2071391 | None:intergenic | 40.0% | |
| GTATTCATCCGGATCAAATC+TGG | + | chr1_4:2071499-2071518 | Msa0143140:CDS | 40.0% | |
| TGTCTCTTTCAATTACTCGC+CGG | + | chr1_4:2071618-2071637 | Msa0143140:CDS | 40.0% | |
| CTCGCCGGAAAAATTCAATT+CGG | + | chr1_4:2071633-2071652 | Msa0143140:CDS | 40.0% | |
| !!! | TGTGATTTTAGGTTGGATCG+TGG | + | chr1_4:2071656-2071675 | Msa0143140:CDS | 40.0% |
| !! | CGTTGTTTTCAACATGCTTG+CGG | + | chr1_4:2071698-2071717 | Msa0143140:CDS | 40.0% |
| !! | GTTGTTTTCAACATGCTTGC+GGG | + | chr1_4:2071699-2071718 | Msa0143140:CDS | 40.0% |
| CATACTTGTACCAGTGTTGT+TGG | + | chr1_4:2071744-2071763 | Msa0143140:CDS | 40.0% | |
| TGGTTATTCTATGTTGCCAG+TGG | + | chr1_4:2071764-2071783 | Msa0143140:CDS | 40.0% | |
| ATTGCAGAGAAAATCACCAC+TGG | - | chr1_4:2071783-2071802 | None:intergenic | 40.0% | |
| TTCCACATGGTGGTTTCTTT+GGG | + | chr1_4:2071814-2071833 | Msa0143140:CDS | 40.0% | |
| ! | TCGCTGCGATTTTTGTTCTA+TGG | + | chr1_4:2071844-2071863 | Msa0143140:CDS | 40.0% |
| ! | CGCTGCGATTTTTGTTCTAT+GGG | + | chr1_4:2071845-2071864 | Msa0143140:CDS | 40.0% |
| CTTGTGGTTTCTCTTACTGA+TGG | + | chr1_4:2071888-2071907 | Msa0143140:CDS | 40.0% | |
| ! | TTTGAAGATTTTGTCCGGCG+GGG | - | chr1_4:2071305-2071324 | None:intergenic | 45.0% |
| TTTGGTTGGAACGGTGGTAT+TGG | - | chr1_4:2071339-2071358 | None:intergenic | 45.0% | |
| GAGATCAGCGTCTTTGTGAA+CGG | - | chr1_4:2071568-2071587 | None:intergenic | 45.0% | |
| !!! | TCGCTTTTTCTTCCACATGG+TGG | + | chr1_4:2071804-2071823 | Msa0143140:CDS | 45.0% |
| CTTCCACATGGTGGTTTCTT+TGG | + | chr1_4:2071813-2071832 | Msa0143140:CDS | 45.0% | |
| ! | ATGGGCTACTAGAGCTTCAA+CGG | + | chr1_4:2071863-2071882 | Msa0143140:CDS | 45.0% |
| ATGGCTGTGATGAACATCGT+GGG | + | chr1_4:2071907-2071926 | Msa0143140:CDS | 45.0% | |
| !! | GGAACGGTGGTATTGGTACA+CGG | - | chr1_4:2071332-2071351 | None:intergenic | 50.0% |
| ATGCCGGAGTTTGGTTGGAA+CGG | - | chr1_4:2071348-2071367 | None:intergenic | 50.0% | |
| ATGAAAGGGATGCCGGAGTT+TGG | - | chr1_4:2071357-2071376 | None:intergenic | 50.0% | |
| ATTCCGGGACCAGAGTAGAT+TGG | - | chr1_4:2071423-2071442 | None:intergenic | 50.0% | |
| ATCTACTCTGGTCCCGGAAT+CGG | + | chr1_4:2071423-2071442 | Msa0143140:CDS | 50.0% | |
| TTCCGTTAACTTCGACGACG+AGG | + | chr1_4:2071455-2071474 | Msa0143140:CDS | 50.0% | |
| CTCCTCGTCGTCGAAGTTAA+CGG | - | chr1_4:2071460-2071479 | None:intergenic | 50.0% | |
| ACGGTATGGTTCACGCGAAA+CGG | - | chr1_4:2071549-2071568 | None:intergenic | 50.0% | |
| CAGCGTCTTTGTGAACGGTA+TGG | - | chr1_4:2071563-2071582 | None:intergenic | 50.0% | |
| CACAAAGACGCTGATCTCTC+TGG | + | chr1_4:2071570-2071589 | Msa0143140:CDS | 50.0% | |
| TGCGGGTCGAACTGGAAATT+TGG | + | chr1_4:2071716-2071735 | Msa0143140:CDS | 50.0% | |
| AGCCCAAAGAAACCACCATG+TGG | - | chr1_4:2071819-2071838 | None:intergenic | 50.0% | |
| TGGGCTACTAGAGCTTCAAC+GGG | + | chr1_4:2071864-2071883 | Msa0143140:CDS | 50.0% | |
| GATGGCTGTGATGAACATCG+TGG | + | chr1_4:2071906-2071925 | Msa0143140:CDS | 50.0% | |
| !! | ACGGTGGTATTGGTACACGG+CGG | - | chr1_4:2071329-2071348 | None:intergenic | 55.0% |
| CCACCGTTCCAACCAAACTC+CGG | + | chr1_4:2071342-2071361 | Msa0143140:CDS | 55.0% | |
| AAGGGATGCCGGAGTTTGGT+TGG | - | chr1_4:2071353-2071372 | None:intergenic | 55.0% | |
| AGAGTAGATTGGACCGGAGG+AGG | - | chr1_4:2071412-2071431 | None:intergenic | 55.0% | |
| TCCTCCGGTCCAATCTACTC+TGG | + | chr1_4:2071411-2071430 | Msa0143140:CDS | 55.0% | |
| ACCAGAGTAGATTGGACCGG+AGG | - | chr1_4:2071415-2071434 | None:intergenic | 55.0% | |
| GGGACCAGAGTAGATTGGAC+CGG | - | chr1_4:2071418-2071437 | None:intergenic | 55.0% | |
| GGTCCAATCTACTCTGGTCC+CGG | + | chr1_4:2071417-2071436 | Msa0143140:CDS | 55.0% | |
| ATACCGAGCTCGTCGAGAAG+AGG | - | chr1_4:2071483-2071502 | None:intergenic | 55.0% | |
| CGACGAGCTCGGTATTCATC+CGG | + | chr1_4:2071488-2071507 | Msa0143140:CDS | 55.0% | |
| CGGTATGGTTCACGCGAAAC+GGG | - | chr1_4:2071548-2071567 | None:intergenic | 55.0% | |
| AACATGCTTGCGGGTCGAAC+TGG | + | chr1_4:2071708-2071727 | Msa0143140:CDS | 55.0% | |
| GGGCTACTAGAGCTTCAACG+GGG | + | chr1_4:2071865-2071884 | Msa0143140:CDS | 55.0% | |
| TAGAGCTTCAACGGGGCTTG+TGG | + | chr1_4:2071872-2071891 | Msa0143140:CDS | 55.0% | |
| CCGGAGTTTGGTTGGAACGG+TGG | - | chr1_4:2071345-2071364 | None:intergenic | 60.0% | |
| TGGACCGGAGGAGGTGGAAA+CGG | - | chr1_4:2071403-2071422 | None:intergenic | 60.0% | |
| GTAGATTGGACCGGAGGAGG+TGG | - | chr1_4:2071409-2071428 | None:intergenic | 60.0% | |
| TACTCTGGTCCCGGAATCGG+CGG | + | chr1_4:2071426-2071445 | Msa0143140:CDS | 60.0% | |
| GAGCCTCTTCTCGACGAGCT+CGG | + | chr1_4:2071477-2071496 | Msa0143140:CDS | 60.0% | |
| CGGAGGCGAAGGATACCGGT+GGG | - | chr1_4:2071275-2071294 | None:intergenic | 65.0% | |
| ACGGAGGCGAAGGATACCGG+TGG | - | chr1_4:2071276-2071295 | None:intergenic | 65.0% | |
| CCGACGGAGGCGAAGGATAC+CGG | - | chr1_4:2071279-2071298 | None:intergenic | 65.0% | |
| CCGGTATCCTTCGCCTCCGT+CGG | + | chr1_4:2071276-2071295 | Msa0143140:CDS | 65.0% | |
| TTGTCCGGCGGGGTTACCGA+CGG | - | chr1_4:2071295-2071314 | None:intergenic | 65.0% | |
| ACCGGAGGAGGTGGAAACGG+CGG | - | chr1_4:2071400-2071419 | None:intergenic | 65.0% | |
| !! | GAACCACCACCGCCGATTCC+GGG | - | chr1_4:2071438-2071457 | None:intergenic | 65.0% |
| !! | GGAACCACCACCGCCGATTC+CGG | - | chr1_4:2071439-2071458 | None:intergenic | 65.0% |
| GGGGTTACCGACGGAGGCGA+AGG | - | chr1_4:2071286-2071305 | None:intergenic | 70.0% | |
| GGAGGAGGTGGAAACGGCGG+CGG | - | chr1_4:2071397-2071416 | None:intergenic | 70.0% | |
| GCCGCCGTTTCCACCTCCTC+CGG | + | chr1_4:2071396-2071415 | Msa0143140:CDS | 70.0% | |
| TCTGGTCCCGGAATCGGCGG+TGG | + | chr1_4:2071429-2071448 | Msa0143140:CDS | 70.0% | |
| GCCTCCGTCGGTAACCCCGC+CGG | + | chr1_4:2071288-2071307 | Msa0143140:CDS | 75.0% | |
| TCCGGCGGGGTTACCGACGG+AGG | - | chr1_4:2071292-2071311 | None:intergenic | 75.0% | |
| GGTCCCGGAATCGGCGGTGG+TGG | + | chr1_4:2071432-2071451 | Msa0143140:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 2071252 | 2071989 | 2071252 | ID=Msa0143140;Name=Msa0143140 |
| chr1_4 | mRNA | 2071252 | 2071989 | 2071252 | ID=Msa0143140-mRNA-1;Parent=Msa0143140;Name=Msa0143140-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|245 |
| chr1_4 | exon | 2071252 | 2071989 | 2071252 | ID=Msa0143140-mRNA-1:exon:755;Parent=Msa0143140-mRNA-1 |
| chr1_4 | CDS | 2071252 | 2071989 | 2071252 | ID=Msa0143140-mRNA-1:cds;Parent=Msa0143140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
