AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0804910


Find 316 sgRNAs with CRISPR-Local

Find 907 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr5_3 gene 21268368 21282458 21268368 ID=Msa0804910;Name=Msa0804910
chr5_3 mRNA 21268368 21282458 21268368 ID=Msa0804910-mRNA-1;Parent=Msa0804910;Name=Msa0804910-mRNA-1;_AED=0.30;_eAED=0.30;_QI=182|0.92|0.92|1|0.69|0.57|14|257|1500
chr5_3 exon 21268368 21268536 21268368 ID=Msa0804910-mRNA-1:exon:8472;Parent=Msa0804910-mRNA-1
chr5_3 exon 21268557 21268632 21268557 ID=Msa0804910-mRNA-1:exon:8471;Parent=Msa0804910-mRNA-1
chr5_3 exon 21268687 21268805 21268687 ID=Msa0804910-mRNA-1:exon:8470;Parent=Msa0804910-mRNA-1
chr5_3 exon 21268898 21269152 21268898 ID=Msa0804910-mRNA-1:exon:8469;Parent=Msa0804910-mRNA-1
chr5_3 exon 21269400 21269463 21269400 ID=Msa0804910-mRNA-1:exon:8468;Parent=Msa0804910-mRNA-1
chr5_3 exon 21269579 21269884 21269579 ID=Msa0804910-mRNA-1:exon:8467;Parent=Msa0804910-mRNA-1
chr5_3 exon 21270044 21270261 21270044 ID=Msa0804910-mRNA-1:exon:8466;Parent=Msa0804910-mRNA-1
chr5_3 exon 21270372 21270666 21270372 ID=Msa0804910-mRNA-1:exon:8465;Parent=Msa0804910-mRNA-1
chr5_3 exon 21270801 21270965 21270801 ID=Msa0804910-mRNA-1:exon:8464;Parent=Msa0804910-mRNA-1
chr5_3 exon 21271081 21271719 21271081 ID=Msa0804910-mRNA-1:exon:8463;Parent=Msa0804910-mRNA-1
chr5_3 exon 21271808 21271894 21271808 ID=Msa0804910-mRNA-1:exon:8462;Parent=Msa0804910-mRNA-1
chr5_3 exon 21272580 21274955 21272580 ID=Msa0804910-mRNA-1:exon:8461;Parent=Msa0804910-mRNA-1
chr5_3 exon 21279705 21279821 21279705 ID=Msa0804910-mRNA-1:exon:8460;Parent=Msa0804910-mRNA-1
chr5_3 exon 21282403 21282458 21282403 ID=Msa0804910-mRNA-1:exon:8459;Parent=Msa0804910-mRNA-1
chr5_3 five_prime_UTR 21282403 21282458 21282403 ID=Msa0804910-mRNA-1:five_prime_utr;Parent=Msa0804910-mRNA-1
chr5_3 five_prime_UTR 21279705 21279821 21279705 ID=Msa0804910-mRNA-1:five_prime_utr;Parent=Msa0804910-mRNA-1
chr5_3 five_prime_UTR 21274947 21274955 21274947 ID=Msa0804910-mRNA-1:five_prime_utr;Parent=Msa0804910-mRNA-1
chr5_3 CDS 21272580 21274946 21272580 ID=Msa0804910-mRNA-1:cds;Parent=Msa0804910-mRNA-1
chr5_3 CDS 21271808 21271894 21271808 ID=Msa0804910-mRNA-1:cds;Parent=Msa0804910-mRNA-1
chr5_3 CDS 21271081 21271719 21271081 ID=Msa0804910-mRNA-1:cds;Parent=Msa0804910-mRNA-1
chr5_3 CDS 21270801 21270965 21270801 ID=Msa0804910-mRNA-1:cds;Parent=Msa0804910-mRNA-1
chr5_3 CDS 21270372 21270666 21270372 ID=Msa0804910-mRNA-1:cds;Parent=Msa0804910-mRNA-1
chr5_3 CDS 21270044 21270261 21270044 ID=Msa0804910-mRNA-1:cds;Parent=Msa0804910-mRNA-1
chr5_3 CDS 21269579 21269884 21269579 ID=Msa0804910-mRNA-1:cds;Parent=Msa0804910-mRNA-1
chr5_3 CDS 21269400 21269463 21269400 ID=Msa0804910-mRNA-1:cds;Parent=Msa0804910-mRNA-1
chr5_3 CDS 21268898 21269152 21268898 ID=Msa0804910-mRNA-1:cds;Parent=Msa0804910-mRNA-1
chr5_3 CDS 21268699 21268805 21268699 ID=Msa0804910-mRNA-1:cds;Parent=Msa0804910-mRNA-1
chr5_3 three_prime_UTR 21268687 21268698 21268687 ID=Msa0804910-mRNA-1:three_prime_utr;Parent=Msa0804910-mRNA-1
chr5_3 three_prime_UTR 21268557 21268632 21268557 ID=Msa0804910-mRNA-1:three_prime_utr;Parent=Msa0804910-mRNA-1
chr5_3 three_prime_UTR 21268368 21268536 21268368 ID=Msa0804910-mRNA-1:three_prime_utr;Parent=Msa0804910-mRNA-1
Gene Sequence

>Msa0804910

ATGAACCTTGGAACCAATTTTCTTCTGGAACCCATTTTCCTTCATGGGTTATCTAGCTTAATTCATGTACTGTTGCTTGTTGCGGTTTTAGTCTCATGGGTTTGGAAAAAAATCACAACTAGTGTTGTCAATGAGCCTAAGGAGACACCTGCCAGCACTTGGTTTAAAGTCACAGAGTTTTGTTCTATTGGTTTCTCTTCTTTCAATTTTGTTCTGTTTCTGTTCAATTACCTTTACTGGTATAGAAGTGGTTGGTCAGAAGAAAAAGTTGTTACCCTTTTTGATTTAGCTCTCAAAACAGTTACTTGGTGTGTTGTATATGCTTGTTTCCACAAAGGGTTCTTCTTTTTCTTGAGCTCAGGTCAAAGAAAAAGAAAGTTTCCATTCTTCTTTAGAGCTTGGTGTGTTTTCTATCTGTTTGTTTCTTGTTGGTGCTTTGTTATTGACATACTCGTTTTGTATGAAAATCATATTGAGTTAACACCTCAATGCATGGTTTCTGATGTGGTATCCTTTTGTGTTGGTTTGTTCTTCTGTTATGTGGGGTATTGTGTGAAAAATGAGAGTGAAGAAGGTGATAGAACTCTTCAAGAGCATCTTTTGAATGGTGATACACATGGTGGTAATGGTAATGATAATGGTAATGCTTTAGAGTTAAAAGAGACTAAAGGGAGTGACACTGTTACTCCTTTTTCAAATGCTGGAATTTGGAGTCTTCTCACCTTCACTTGGGTGGGTCCACTTATAACATTTGGCAATAAGAAGACCTTAGACCTTGAGGATGTTCCTCAGCTAGATAGTAGAGATAGTGTAGTTGGAGCTTTTCCAATTTTCAGAGACAAACTTGAAGCTGATTGTGGTGCAATCAATAAAGTAACCACACTTAAATTGGTTAAGTCTTTGATAATCTCAGGGTGGAAAGTGATTCTTATCACTGCTTTTCTTGCATTGGTAAACACTCTTTCTACTTATGTTGGTCCTTATCTTATTGATTCTTTTGTTCAATACCTTAATGGAAAAAGGCTATATGAGAATCAAGGCTATGTGTTGGTTTCTGCTTTTTTCTTTGCAAAGCTTGTAGAAAGCTTAACAAATAGGCATCAGTTCTTTAGGTTGCAGCAACTCGGACTTCGAATTCAAGCACTGCTTGTGACTTTGATATATAACAAAGCCTTAACACTTTCATCTCAATCAAGGCAGTGTCAGACTTCCGGAGAAATAATCAATTTCATGACCGTTGATGCTGAAAGAGTTGGTAGTTTCAGTTGGTACATGCATGATTTGTGGATAGTAGCTTTGCAAGTTACATTGGCATTGTTGATTTTGTATAAAAACCTTGGACTTGCTTCAGTTGCTGCTTTTGCTACAACCATCATCGTTATGTTGGCAACTCTTCCATCAGGATCACTGCAAGAGAAGTTACAAAATAAGTTGATGGAGTCAAAGGATTCTAGAATGAAGACCACATCTGAAATTTTAAGAAACATGAGGGTCCTCAAACTACAAGGATGGGAAATGAAGTTTCTGTCTAAAGTAACTGAGCTCAGAGAGGCCGAACAAGGGTGGCTGAAAAAATTTCTATATACTTCAGCCATGACTACATTTGTCCTTTGGGGTACACCTATACTTTCATCTGTGGTTTCTTTTGGCACTTGTATGCTCTTAGGGATCCCGCTTGAATCAGGGAAGATTCTGTCAGCACTTGCAACATTCAGGATGCTTCAAAGGCCTATTTATAGTCTTCCAGATGTAATTTCAATGATAGCACAAACTAAAGTTTCTCTTGATAGGATCGGGTCGTTTCTTCGTCTTGATGACTTGCAGTTTGATGTTGTCGAAAAGCTTCCTCCTGGTAGTTCTGATACTGCAATTGAAGTGGTTGATGGGAATTTTTCTTGTGATTTATCTTCACCTAGTCCAACTTTGCAAAACATAAACCTCAAAGTTTTTCATGGCATGAAGGTTGCTGTTTGCGGTACTGTTGGATCGGGCAAGTCTACTTTACTTTCATGTGTATTGGGAGAAGTACCAAAGATATCAGGCATCCTTAAAGTTTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATTCAAAGTGGCAAGATAGAGGATAATATATTGTTTGGTGAAGACATGGTTAGCGAAAGGTATGAGAAGGTACTTGAAGCGTGTTCCCTGAAGAAGGATCTGGAAATCTTGCCATTTGGTGATCAGACAGTTATAGGCGAGCGTGGAATAAATTTGAGTGGTGGGCAGAAACAGAGAATACAAATTGCTCGTGCTCTTTACCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCTCTGGATGCTCATACAGGATCTGACCTTTTTAAGGAATGCTTGCTGGGAGTTTTAAGTTCAAAAACAGTTGTTTACGTTACTCATCAAGTCGAGTTCTTACCTACTGCTGACCTTATATTGGTCATGAAAGATGGAAAAATTACTCAAAGTGGAAAGTATGTCGATCTTCTTAACATTGGAACCGATTTTATGGATCTTGTTGGTGCACACAGAGAAGCTTTGTCTACACTTGAATCATTGGATAGAGGAAAAGCATCTAATGAAATAAAAACATTTGAACAAGAAATAAATATCTCTGGCACTCATGAAGATGCAAACAAAGATGTGCAAAATGGTAAAGCAGATGATAAAAGCGAACTGAAAGGCCATCTTGTTCAAGAAGAAGAAAGGGAGAAAGGTAAAGTTGGGTTTTCAGTCTATTGGAAGTATATCACAACTGCATATGGAGGATCTCTCGTACCGTTCATATTATTGGCTCAGATTCTTTTTCAAGCTCTTCAAATTGGAAGCAACTACTGGATGGCTTGGGCAACTCCCATCTCAGAAGATGTGGAGCCACCTGTTGCAGGAAATACTCTTATTAAAGTCTATGTTAGTTTGGCCATTGGAAGTTCTTTATGTATTCTTGTTAGATCATTGTTACTTGTTACAGTTGGTTATAAGACAGCTACCATACTCTTCAAGAAAATGCACTTATGCATCTTTCGCGCTCCCATGTCATTTTTCGATTCTACTCCAAGTGGACGGATCCTTAATAGAGGTTCTACTGACCAAAGTGCAGTGGATATAGACATTCCTGATAAAATTGGCACATTTGCCTTTTCTATGATCCAACTTCTGGGAATTATAGCAGTGATGTCTCAGGTTGCATGGCAAGTTTTCATTGTCTTTGTACCCGTGATAGCAGTCAGCATTCGGTATCAGCGTTATTATTTACCATCAGCCCGTGAACTGTCACGTTTAGGTGGAGTATGCAAAGCCCCAATCATTCAGCACTTTGCAGAAACAATTTCCGGAACTTCAACGATTAGAAGCTTTGATCAACAGTCAAGATTTCATGAAACAAATATGAAACTGATTGATGGGTATTCTCGGCCAAAGTTCAACATTGCTGCTGCGATGGAATGGTTAAGTTTCCGTTTAGATATGTTGTCTCTGATCACCTTTGCCTTTTCTTTGATATTCTTGATATCGATTCCACCTGGAATCATAAATCCAGGCATTGCCGGTCTAGCTGTTACCTATGGTCTAAATTTAAACATCATACAAGCTTGGATGATATTGACTCTTTGCAACTTAGAGAATAAAATTATATCTGTAGAAAGGATACTTCAGTATACAACCATTCCAAGTGAGCCTCCTCTTGTTTTAGAAGAAGAAAATAGGCCAGATCCTTCTTGGCCTGCATATGGCGAGGTTGATATACGGAACTTGCAGGTTCGTTATGCTCCACATCTTCCGCTTGTGTTGCGTGGCCTGACATGCACATTTCGTGGAGGATTGAAAACTGGCATTGTTGGTAGAACAGGTAGCGGAAAATCAACTCTTATACAAACACTTTTCCGACTCTTTGAACCTACTGCCGGGGAAATTATCATTGACAACATCAACATTTCTACAATCGGACTGCATGATTTGAGGTCTAAACTAAGCATTATTCCGCAAGATCCAACAATGTTTGAGGGGACAATGAGAAGTAATCTGGACCCCCTTGAAGAGTACACTGATGAACAAATATGGGAGGCATTGGATAAGTGTCAACTGGGCGATGAAGTTAGAAAGAAAGAAGGAAAGCTTGACTCTTCAGTTTATGCGTTTATAGTTAGTGAAAATGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTAGTTTGCCTAGGTAGGGTTCTGCTTAAGAAGAGCAAGATTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACAGCCACAGATAATTTGATTCAGCAAACTCTTAGGCAGCATTTCACTAACTCTACCGTCATTACCATTGCTCATCGAATAACTTCTGTTCTTGATAGTGATATGGTTCTACTTCTTAGTCAAGGACTTATTATGGAGCATGACTCCCCAACCACATTGCTAGAGGATAAGTCATCATCTTTTGCTAAGCTTGTTGCAGAGTATACCATGAGGTCCAACTCTAATTTTTGA

Protein sequence

>Msa0804910

MNLGTNFLLEPIFLHGLSSLIHVLLLVAVLVSWVWKKITTSVVNEPKETPASTWFKVTEFCSIGFSSFNFVLFLFNYLYWYRSGWSEEKVVTLFDLALKTVTWCVVYACFHKGFFFFLSSGQRKRKFPFFFRAWCVFYLFVSCWCFVIDILVLYENHIELTPQCMVSDVVSFCVGLFFCYVGYCVKNESEEGDRTLQEHLLNGDTHGGNGNDNGNALELKETKGSDTVTPFSNAGIWSLLTFTWVGPLITFGNKKTLDLEDVPQLDSRDSVVGAFPIFRDKLEADCGAINKVTTLKLVKSLIISGWKVILITAFLALVNTLSTYVGPYLIDSFVQYLNGKRLYENQGYVLVSAFFFAKLVESLTNRHQFFRLQQLGLRIQALLVTLIYNKALTLSSQSRQCQTSGEIINFMTVDAERVGSFSWYMHDLWIVALQVTLALLILYKNLGLASVAAFATTIIVMLATLPSGSLQEKLQNKLMESKDSRMKTTSEILRNMRVLKLQGWEMKFLSKVTELREAEQGWLKKFLYTSAMTTFVLWGTPILSSVVSFGTCMLLGIPLESGKILSALATFRMLQRPIYSLPDVISMIAQTKVSLDRIGSFLRLDDLQFDVVEKLPPGSSDTAIEVVDGNFSCDLSSPSPTLQNINLKVFHGMKVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSPWIQSGKIEDNILFGEDMVSERYEKVLEACSLKKDLEILPFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSALDAHTGSDLFKECLLGVLSSKTVVYVTHQVEFLPTADLILVMKDGKITQSGKYVDLLNIGTDFMDLVGAHREALSTLESLDRGKASNEIKTFEQEINISGTHEDANKDVQNGKADDKSELKGHLVQEEEREKGKVGFSVYWKYITTAYGGSLVPFILLAQILFQALQIGSNYWMAWATPISEDVEPPVAGNTLIKVYVSLAIGSSLCILVRSLLLVTVGYKTATILFKKMHLCIFRAPMSFFDSTPSGRILNRGSTDQSAVDIDIPDKIGTFAFSMIQLLGIIAVMSQVAWQVFIVFVPVIAVSIRYQRYYLPSARELSRLGGVCKAPIIQHFAETISGTSTIRSFDQQSRFHETNMKLIDGYSRPKFNIAAAMEWLSFRLDMLSLITFAFSLIFLISIPPGIINPGIAGLAVTYGLNLNIIQAWMILTLCNLENKIISVERILQYTTIPSEPPLVLEEENRPDPSWPAYGEVDIRNLQVRYAPHLPLVLRGLTCTFRGGLKTGIVGRTGSGKSTLIQTLFRLFEPTAGEIIIDNINISTIGLHDLRSKLSIIPQDPTMFEGTMRSNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSSVYAFIVSENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLRQHFTNSTVITIAHRITSVLDSDMVLLLSQGLIMEHDSPTTLLEDKSSSFAKLVAEYTMRSNSNF*