AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0806250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0806250 MtrunA17_Chr1g0170261 96.250 80 3 0 1 80 1 80 8.17e-47 159
Msa0806250 MtrunA17_Chr3g0119031 47.500 80 36 3 1 78 1 76 1.11e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0806250 AT3G11910.3 56.962 79 27 4 1 77 1 74 2.15e-16 72.8
Msa0806250 AT3G11910.1 56.962 79 27 4 1 77 1 74 2.15e-16 72.8
Msa0806250 AT5G06600.1 57.500 80 26 5 1 77 1 75 6.23e-16 71.2
Msa0806250 AT5G06600.3 57.500 80 26 5 1 77 1 75 6.39e-16 71.2
Msa0806250 AT3G11910.4 55.696 79 27 4 1 77 1 73 7.87e-16 71.2
Msa0806250 AT3G11910.2 55.696 79 27 4 1 77 1 73 7.87e-16 71.2
Msa0806250 AT5G06600.2 56.250 80 26 5 1 77 1 74 2.32e-15 69.7

Find 118 sgRNAs with CRISPR-Local

Find 499 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATCATTTCAATATTCTT+TGG 0.266276 5_3:+24158988 None:intergenic
AAAGAGTTAACCAAATCTTT+TGG 0.276067 5_3:-24160803 Msa0806250:three_prime_UTR
CCTTACAATTAGATCTTGAT+AGG 0.285562 5_3:-24159711 Msa0806250:three_prime_UTR
TGACTAACCTTTCTGAAATA+AGG 0.285682 5_3:+24161006 None:intergenic
GCAACCACTTCTGTTTATAT+CGG 0.291404 5_3:-24159022 Msa0806250:three_prime_UTR
ATGATGTCTAAGAACTTAAC+AGG 0.300249 5_3:-24160751 Msa0806250:three_prime_UTR
GAATTCTGAAGACATAAATA+AGG 0.300558 5_3:-24158786 Msa0806250:three_prime_UTR
AAGAAGGGGAAGATGGGTTT+TGG 0.304871 5_3:+24166401 None:intergenic
AGACATAAATAAGGGTAATA+TGG 0.305906 5_3:-24158777 Msa0806250:three_prime_UTR
TTAGATCTTGATAGGGATAA+TGG 0.306686 5_3:-24159703 Msa0806250:three_prime_UTR
CACCACCACTCCTCCGTTAG+AGG 0.318183 5_3:-24166248 Msa0806250:intron
CCATATGTACATATTTCTAT+TGG 0.319865 5_3:-24158819 Msa0806250:three_prime_UTR
TGCAGAGCAGTATGGTTTAC+AGG 0.343261 5_3:-24160283 Msa0806250:intron
TCTGATGCTGTTGTTGTTGA+AGG 0.347454 5_3:-24165984 Msa0806250:CDS
AATACCTGTGAAGTGTATAA+AGG 0.350377 5_3:+24159641 None:intergenic
CAGCTTAACTGTGGTCAATC+AGG 0.357604 5_3:-24165115 Msa0806250:three_prime_UTR
GATGAATGCAAAATATTAGA+TGG 0.360835 5_3:+24159076 None:intergenic
TGCATTCAATATAGTTCATA+TGG 0.361714 5_3:+24160529 None:intergenic
TGCGCAAAGATCTTGATTAC+TGG 0.363993 5_3:-24161125 Msa0806250:three_prime_UTR
TGTATCCCATCCAAAAGATT+TGG 0.366228 5_3:+24160793 None:intergenic
ATCTTATATATTAGTTAAGA+TGG 0.371000 5_3:-24158908 Msa0806250:three_prime_UTR
GATGCAGGTTCGATGCCTTA+TGG 0.373749 5_3:-24165159 Msa0806250:three_prime_UTR
TTAATGCGCGTGAGAGTGAT+TGG 0.411208 5_3:-24161242 Msa0806250:three_prime_UTR
ATGAAGCGAGCGAAGAAACT+AGG 0.416385 5_3:+24166293 None:intergenic
CAACCACTTCTGTTTATATC+GGG 0.418388 5_3:-24159021 Msa0806250:three_prime_UTR
TGAACTCTTGAACATGATAT+CGG 0.423335 5_3:-24159462 Msa0806250:three_prime_UTR
ACAACAACAGCATCAGAGTT+AGG 0.423777 5_3:+24165990 None:intergenic
CCAATAGAAATATGTACATA+TGG 0.426098 5_3:+24158819 None:intergenic
CCTATCAAGATCTAATTGTA+AGG 0.427249 5_3:+24159711 None:intergenic
ACATCGGAATAATGTTTCTT+CGG 0.432526 5_3:+24165382 None:intergenic
TAGATCTTGATAGGGATAAT+GGG 0.437845 5_3:-24159702 Msa0806250:three_prime_UTR
GCAGTTGAAGATCCGCCAAT+TGG 0.442781 5_3:-24165442 Msa0806250:CDS
TTCTTCAGCTTCAGTTAAAA+CGG 0.445451 5_3:-24160100 Msa0806250:three_prime_UTR
TTAAGATGGATGGTAAGTTA+TGG 0.451746 5_3:-24158894 Msa0806250:three_prime_UTR
AAGTATCATGCAGAGCAGTA+TGG 0.452897 5_3:-24160291 Msa0806250:three_prime_UTR
TAATGCGCGTGAGAGTGATT+GGG 0.455780 5_3:-24161241 Msa0806250:three_prime_UTR
TATATAGATGTTACAGATGC+AGG 0.456399 5_3:-24165174 Msa0806250:three_prime_UTR
ACTGAAAATGATATGCCATC+TGG 0.457124 5_3:-24160893 Msa0806250:three_prime_UTR
CGAATACTTCTGTCTGCGTC+AGG 0.461639 5_3:+24159667 None:intergenic
GCCATCTGGGAGCATCCCTC+TGG 0.463909 5_3:-24160879 Msa0806250:three_prime_UTR
TGTTCAGCATTGTTCCCCTT+CGG 0.468250 5_3:+24165207 None:intergenic
AGTAAATATTCCGTCAGAAA+AGG 0.469439 5_3:-24165087 Msa0806250:intron
TTTAACTGAAGCTGAAGAAC+AGG 0.471336 5_3:+24160104 None:intergenic
ATAAGCGAAGAAGGGGAAGA+TGG 0.472328 5_3:+24166394 None:intergenic
GTCCATGTGAATCTCCCAAT+TGG 0.481266 5_3:+24165427 None:intergenic
CAGTTGAAGATCCGCCAATT+GGG 0.486788 5_3:-24165441 Msa0806250:CDS
TCACATTCCTTATTTCAGAA+AGG 0.489887 5_3:-24161013 Msa0806250:intron
TCATGTAACAAGTAGCTCCT+TGG 0.493061 5_3:+24161058 None:intergenic
TAAGCGAAGAAGGGGAAGAT+GGG 0.495142 5_3:+24166395 None:intergenic
GCATTACCTTCCATAGGTTG+AGG 0.497016 5_3:+24165960 None:intergenic
TGTTGAAGGTCCTCAACCTA+TGG 0.497121 5_3:-24165970 Msa0806250:CDS
TATCTTACATGTGGCGATGT+AGG 0.501672 5_3:-24159173 Msa0806250:three_prime_UTR
AGTTGCGTTTACTACGGAAA+AGG 0.504159 5_3:+24166446 None:intergenic
TGCGCGAGACACTATGGTAA+AGG 0.504586 5_3:-24160063 Msa0806250:intron
GCCTTCAAACAACTTCTGTA+TGG 0.514735 5_3:+24160554 None:intergenic
CAGGTTCGATGCCTTATGGT+TGG 0.516574 5_3:-24165155 Msa0806250:three_prime_UTR
AGCATCAGTTGCGTTTACTA+CGG 0.521612 5_3:+24166440 None:intergenic
TATATATTAGTTAAGATGGA+TGG 0.538285 5_3:-24158904 Msa0806250:three_prime_UTR
GCAACCTTTATACACTTCAC+AGG 0.539923 5_3:-24159645 Msa0806250:intron
GTAAAGCTTGTGCACTGCAT+AGG 0.540182 5_3:-24159118 Msa0806250:three_prime_UTR
ACCATACAGAAGTTGTTTGA+AGG 0.540530 5_3:-24160555 Msa0806250:three_prime_UTR
AATTCTGAAGACATAAATAA+GGG 0.540626 5_3:-24158785 Msa0806250:three_prime_UTR
GCAAATCTAGTCCAACCATA+AGG 0.541036 5_3:+24165144 None:intergenic
AGGGTTTGCGAATGATGAAA+GGG 0.541124 5_3:+24166313 None:intergenic
CTTACAATTAGATCTTGATA+GGG 0.543468 5_3:-24159710 Msa0806250:three_prime_UTR
TAGGGTTTGCGAATGATGAA+AGG 0.544762 5_3:+24166312 None:intergenic
CTGAAAATGATATGCCATCT+GGG 0.544979 5_3:-24160892 Msa0806250:three_prime_UTR
CATGATATCGGAAGCTGCAG+TGG 0.546090 5_3:-24159450 Msa0806250:three_prime_UTR
GCGCAAAGATCTTGATTACT+GGG 0.546659 5_3:-24161124 Msa0806250:three_prime_UTR
CTATCAAGATCTAATTGTAA+GGG 0.549176 5_3:+24159712 None:intergenic
TGAAGCGAGCGAAGAAACTA+GGG 0.550033 5_3:+24166294 None:intergenic
TCGCCACATGTAAGATAGAC+AGG 0.550072 5_3:+24159179 None:intergenic
AACAAACTCTGTAATGCCAG+AGG 0.550134 5_3:+24160863 None:intergenic
TCCACAACATAGCCTCTACT+AGG 0.563161 5_3:+24161180 None:intergenic
GTGGAAGTAGAACAGCTTGA+GGG 0.565647 5_3:-24160321 Msa0806250:three_prime_UTR
GATCTTCAGCTTGATGTCAA+AGG 0.567722 5_3:-24160378 Msa0806250:three_prime_UTR
CACATTGCATTACCTTCCAT+AGG 0.574604 5_3:+24165954 None:intergenic
AACTGAAGCTGAAGAACAGG+TGG 0.576147 5_3:+24160107 None:intergenic
TTTCAGGGAACTGTTGTGGA+AGG 0.577078 5_3:-24160579 Msa0806250:intron
CGCCAATTGGGAGATTCACA+TGG 0.581165 5_3:-24165429 Msa0806250:CDS
AATGCGCGTGAGAGTGATTG+GGG 0.581175 5_3:-24161240 Msa0806250:three_prime_UTR
TTTCAGAACAAATTAAGATG+GGG 0.584112 5_3:+24158943 None:intergenic
AGTAGATGCATCGGAAACAC+AGG 0.592202 5_3:+24158696 None:intergenic
TTTCCCGATATAAACAGAAG+TGG 0.597045 5_3:+24159018 None:intergenic
GCGGATACTGATCTTTCCGA+AGG 0.601985 5_3:-24165223 Msa0806250:CDS
CACAAGTACAGTGGATGCTG+TGG 0.605419 5_3:-24165464 Msa0806250:CDS
AAAGCTAGAAGACAAAATGA+AGG 0.607281 5_3:-24160717 Msa0806250:intron
CGGATACTGATCTTTCCGAA+GGG 0.607412 5_3:-24165222 Msa0806250:CDS
CATGTGAATCTCCCAATTGG+CGG 0.608755 5_3:+24165430 None:intergenic
TGTGGAAGTAGAACAGCTTG+AGG 0.609687 5_3:-24160322 Msa0806250:three_prime_UTR
TACCTCTAACGGAGGAGTGG+TGG 0.610470 5_3:+24166246 None:intergenic
TATCAAGATCTAATTGTAAG+GGG 0.610556 5_3:+24159713 None:intergenic
GCCAGAGGGATGCTCCCAGA+TGG 0.612314 5_3:+24160878 None:intergenic
GGATCATACAATTCAGCAAG+AGG 0.617299 5_3:+24161201 None:intergenic
ACGCGATTGATTACCTCTAA+CGG 0.618741 5_3:+24166235 None:intergenic
ACAAACTCTGTAATGCCAGA+GGG 0.625922 5_3:+24160864 None:intergenic
TCCTAGTAGAGGCTATGTTG+TGG 0.625984 5_3:-24161181 Msa0806250:three_prime_UTR
GAAGGTCCTCAACCTATGGA+AGG 0.631259 5_3:-24165966 Msa0806250:intron
TCTAGCGGTGCGGATGCAAG+TGG 0.635527 5_3:+24159503 None:intergenic
TGCACAGTTCAGCTTAACTG+TGG 0.636127 5_3:-24165124 Msa0806250:three_prime_UTR
AGGAGTGGTGGTGATAGTCA+TGG 0.638641 5_3:+24166258 None:intergenic
TGTAGGCTTTGAAGAGACGT+TGG 0.640799 5_3:-24159156 Msa0806250:three_prime_UTR
GAATTGTATGATCCTAGTAG+AGG 0.640831 5_3:-24161192 Msa0806250:three_prime_UTR
GATTACCTCTAACGGAGGAG+TGG 0.641206 5_3:+24166243 None:intergenic
GTAGCAACAGAATCTTGAAG+TGG 0.641625 5_3:-24166030 Msa0806250:intron
CTATATTGAATGCATGAATG+TGG 0.644705 5_3:-24160520 Msa0806250:three_prime_UTR
ATTCAATATAGTTCATATGG+TGG 0.646922 5_3:+24160532 None:intergenic
GGAGATTGATGCTCTTGCAG+AGG 0.647925 5_3:-24159429 Msa0806250:intron
AGCAGAAAACACAAGTACAG+TGG 0.653432 5_3:-24165473 Msa0806250:CDS
CGATTGATTACCTCTAACGG+AGG 0.662494 5_3:+24166238 None:intergenic
ATACCTGTCTATCTTACATG+TGG 0.666277 5_3:-24159182 Msa0806250:three_prime_UTR
CACTGATGCATCTAGCGGTG+CGG 0.684294 5_3:+24159493 None:intergenic
ATTGTAAGGGGAACTCATAG+CGG 0.696550 5_3:+24159725 None:intergenic
AAATCAAAAGAAGAGAACAA+TGG 0.698409 5_3:+24158646 None:intergenic
CTTGACACTGATGCATCTAG+CGG 0.700615 5_3:+24159488 None:intergenic
GGATACTGATCTTTCCGAAG+GGG 0.700894 5_3:-24165221 Msa0806250:CDS
TGATGTCTAAGAACTTAACA+GGG 0.721619 5_3:-24160750 Msa0806250:three_prime_UTR
GGAAGATAGATGCATACTTG+AGG 0.738417 5_3:-24161160 Msa0806250:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAAAAAAAAATAATA+AGG - chr5_3:24165489-24165508 Msa0806250:intron 0.0%
!! TAAATATTGAATATTATACA+TGG + chr5_3:24159765-24159784 None:intergenic 10.0%
!! ATTTATATTCAAAACTATTA+AGG - chr5_3:24160372-24160391 Msa0806250:three_prime_UTR 10.0%
!! TATGAACTAAATAAAAATTT+GGG - chr5_3:24160993-24161012 Msa0806250:intron 10.0%
!!! TTTAGTATTAAATTTTTTTG+TGG - chr5_3:24161746-24161765 Msa0806250:intron 10.0%
!! TTAATAATACAATTTATTTC+TGG - chr5_3:24163367-24163386 Msa0806250:intron 10.0%
!!! GTTAAAATAAAAAGTATAAA+TGG + chr5_3:24165084-24165103 None:intergenic 10.0%
!!! AGTGTCAATTTAATTTTTTT+AGG - chr5_3:24159495-24159514 Msa0806250:three_prime_UTR 15.0%
!!! GTGTCAATTTAATTTTTTTA+GGG - chr5_3:24159496-24159515 Msa0806250:three_prime_UTR 15.0%
!! TGTAAAAATTAAGAAATGAA+GGG - chr5_3:24160130-24160149 Msa0806250:three_prime_UTR 15.0%
!!! CTTTTGAAATTGATTTATTA+TGG - chr5_3:24160207-24160226 Msa0806250:intron 15.0%
!!! GTTTTGAATATAAATTTTCT+TGG + chr5_3:24160367-24160386 None:intergenic 15.0%
!! AAGAAATAAATCATACAATA+AGG - chr5_3:24160885-24160904 Msa0806250:three_prime_UTR 15.0%
!! GTATGAACTAAATAAAAATT+TGG - chr5_3:24160992-24161011 Msa0806250:intron 15.0%
!!! CTTTTTTCTCTTATATATTA+CGG - chr5_3:24161948-24161967 Msa0806250:intron 15.0%
!! TTAGTACAATAAAAATACAT+AGG - chr5_3:24162771-24162790 Msa0806250:intron 15.0%
!!! CAATAATAAATATCCATTTT+GGG - chr5_3:24165108-24165127 Msa0806250:three_prime_UTR 15.0%
!!! CTTTGTTGATTTTAAATATA+AGG - chr5_3:24165459-24165478 Msa0806250:CDS 15.0%
!! ATCTTATATATTAGTTAAGA+TGG - chr5_3:24166159-24166178 Msa0806250:intron 15.0%
!!! GAATTTTTGTGATTTTTTTG+TGG - chr5_3:24159004-24159023 Msa0806250:three_prime_UTR 20.0%
!!! TTTCTTTTGAATTCATGTTA+TGG - chr5_3:24159217-24159236 Msa0806250:intron 20.0%
!!! TTTTGTTATTGGAAATGTTA+GGG - chr5_3:24159240-24159259 Msa0806250:intron 20.0%
!!! ATTCTTTTGAATTCTTGTTA+TGG - chr5_3:24159343-24159362 Msa0806250:intron 20.0%
!! TTGATTATGTTGTATTTAAG+TGG - chr5_3:24160041-24160060 Msa0806250:intron 20.0%
!! GTGTAAAAATTAAGAAATGA+AGG - chr5_3:24160129-24160148 Msa0806250:three_prime_UTR 20.0%
!! AGATCATCAAAAATCTTATT+TGG - chr5_3:24160592-24160611 Msa0806250:intron 20.0%
!!! TATTTATTTAAACCGTTTTG+CGG + chr5_3:24160631-24160650 None:intergenic 20.0%
!! GAGAAAAAAGAAAAAAATAG+AGG - chr5_3:24160917-24160936 Msa0806250:three_prime_UTR 20.0%
!!! CATAAAAAGTACATTAAGAT+TGG - chr5_3:24161022-24161041 Msa0806250:three_prime_UTR 20.0%
!!! AGGAATTATCAATTTTTTAG+CGG + chr5_3:24161052-24161071 None:intergenic 20.0%
!!! AAAAGGTTTTAAGTGAATAT+CGG + chr5_3:24161525-24161544 None:intergenic 20.0%
!! TAAATTCCTATACAATATAG+CGG - chr5_3:24161839-24161858 Msa0806250:intron 20.0%
!! ATTGGATATTTAATAACACT+CGG - chr5_3:24161876-24161895 Msa0806250:intron 20.0%
!! ATATATAAGAGAAAAAAGCA+AGG + chr5_3:24161946-24161965 None:intergenic 20.0%
!! CATTTACAAAAAAAGTTGTT+TGG + chr5_3:24162209-24162228 None:intergenic 20.0%
!! TTAGATTGTATCATTGTAAT+TGG - chr5_3:24162365-24162384 Msa0806250:intron 20.0%
!! GAAATTCAGTAAAGAAAAAA+TGG + chr5_3:24163626-24163645 None:intergenic 20.0%
!!! TTTAATTTTTTTCCGAAAGA+AGG - chr5_3:24164099-24164118 Msa0806250:intron 20.0%
!! ATGTTTAATATTGTTTGTTC+AGG - chr5_3:24164131-24164150 Msa0806250:intron 20.0%
!!! ACAAGAAAAGAATCATTTTA+TGG - chr5_3:24164581-24164600 Msa0806250:intron 20.0%
!!! ATTTTATGGTAGGTATTTTT+TGG - chr5_3:24164595-24164614 Msa0806250:intron 20.0%
!! TGAAATAATTGAAATTCAGA+AGG + chr5_3:24164664-24164683 None:intergenic 20.0%
!! AAATATGAAGGAAAAATAGT+AGG + chr5_3:24164863-24164882 None:intergenic 20.0%
!!! TTTTCCTTCATATTTTAGAT+TGG - chr5_3:24164868-24164887 Msa0806250:intron 20.0%
!!! ATAACCAATCTAAAATATGA+AGG + chr5_3:24164875-24164894 None:intergenic 20.0%
!! CCAAAATGGATATTTATTAT+TGG + chr5_3:24165110-24165129 None:intergenic 20.0%
!!! CCAATAATAAATATCCATTT+TGG - chr5_3:24165107-24165126 Msa0806250:three_prime_UTR 20.0%
!! TTAATTCAGTGATTCATAAA+AGG + chr5_3:24165844-24165863 None:intergenic 20.0%
!! TGTATCATTTCAATATTCTT+TGG + chr5_3:24166082-24166101 None:intergenic 20.0%
!!! TTTTCAGAACAAATTAAGAT+GGG + chr5_3:24166128-24166147 None:intergenic 20.0%
!! TATATATTAGTTAAGATGGA+TGG - chr5_3:24166163-24166182 Msa0806250:intron 20.0%
!!! AATTCTGAAGACATAAATAA+GGG - chr5_3:24166282-24166301 Msa0806250:five_prime_UTR 20.0%
!!! TTTGTTTGATGATGATTACT+AGG - chr5_3:24158962-24158981 Msa0806250:three_prime_UTR 25.0%
!!! TTGTTTGATGATGATTACTA+GGG - chr5_3:24158963-24158982 Msa0806250:three_prime_UTR 25.0%
!!! TTTTTGGAGAAGAAGTTTAT+TGG - chr5_3:24159144-24159163 Msa0806250:three_prime_UTR 25.0%
!!! TCATGTTATGGTTTTGTTAT+TGG - chr5_3:24159229-24159248 Msa0806250:intron 25.0%
!!! GTTTTGTTATTGGAAATGTT+AGG - chr5_3:24159239-24159258 Msa0806250:intron 25.0%
!!! TTTGTTATTGGAAATGTTAG+GGG - chr5_3:24159241-24159260 Msa0806250:intron 25.0%
!!! TCTTGTTATGGTTTTGTTAT+TGG - chr5_3:24159355-24159374 Msa0806250:intron 25.0%
!! ATTTTTGTCCTTTTCGTATT+TGG - chr5_3:24159561-24159580 Msa0806250:intron 25.0%
! TCAATATTTATGCGTATCAT+AGG - chr5_3:24159775-24159794 Msa0806250:intron 25.0%
! CAATATTTATGCGTATCATA+GGG - chr5_3:24159776-24159795 Msa0806250:intron 25.0%
! AATATTTATGCGTATCATAG+GGG - chr5_3:24159777-24159796 Msa0806250:intron 25.0%
!!! TTATATTGATTTAAACGTGC+AGG - chr5_3:24159822-24159841 Msa0806250:intron 25.0%
! AAATGTTTGAGAACCTTAAT+AGG - chr5_3:24160101-24160120 Msa0806250:three_prime_UTR 25.0%
! TCTATATATATTGCTTTGAC+TGG - chr5_3:24160177-24160196 Msa0806250:intron 25.0%
! GATAACATTAGAGTAAGTTA+AGG - chr5_3:24160278-24160297 Msa0806250:intron 25.0%
!! AAATCTTATTTGGCAAATAG+TGG - chr5_3:24160602-24160621 Msa0806250:intron 25.0%
! TAGTTCATACAATTTCTCAT+CGG + chr5_3:24160982-24161001 None:intergenic 25.0%
! GTATCATAGCTTATCAATTT+GGG + chr5_3:24161333-24161352 None:intergenic 25.0%
! AGATTGTTTGTTTAATAGCA+TGG - chr5_3:24161720-24161739 Msa0806250:intron 25.0%
! TTGGATATTTAATAACACTC+GGG - chr5_3:24161877-24161896 Msa0806250:intron 25.0%
! ATACTTCAATCACACTTAAT+TGG + chr5_3:24162043-24162062 None:intergenic 25.0%
!! TAAAAATACTAGGGACTTTT+GGG + chr5_3:24162131-24162150 None:intergenic 25.0%
!! ATTTTATGTGTGAATGTGTA+TGG + chr5_3:24162166-24162185 None:intergenic 25.0%
!!! ATGTTGTTGTAGGTTATTTT+GGG - chr5_3:24162334-24162353 Msa0806250:intron 25.0%
! ATTGTATCATTGTAATTGGA+AGG - chr5_3:24162369-24162388 Msa0806250:intron 25.0%
! AATTGGAATAGAAATTCACA+GGG + chr5_3:24162435-24162454 None:intergenic 25.0%
! AAATTGGAATAGAAATTCAC+AGG + chr5_3:24162436-24162455 None:intergenic 25.0%
!! ACTCAAATTTAAGATGACAA+AGG - chr5_3:24162459-24162478 Msa0806250:intron 25.0%
! TGCAAATAATTAGTGTGTTT+AGG + chr5_3:24162639-24162658 None:intergenic 25.0%
!!! AAATACATAGGAGTTTTAGT+TGG - chr5_3:24162783-24162802 Msa0806250:intron 25.0%
!! ACATCTACATGTGATTTTTA+AGG - chr5_3:24162898-24162917 Msa0806250:intron 25.0%
!! CATCTACATGTGATTTTTAA+GGG - chr5_3:24162899-24162918 Msa0806250:intron 25.0%
!!! ATGTGATTTTTAAGGGATAT+TGG - chr5_3:24162906-24162925 Msa0806250:intron 25.0%
!! CATTCAGAATAATCTTTTGT+TGG - chr5_3:24163246-24163265 Msa0806250:intron 25.0%
! GAAGATAACATTTCTAATGT+CGG + chr5_3:24163327-24163346 None:intergenic 25.0%
! TCTTGAAAAGTGAACATTTA+TGG + chr5_3:24163520-24163539 None:intergenic 25.0%
!! AAAGAGTTAACCAAATCTTT+TGG - chr5_3:24164264-24164283 Msa0806250:intron 25.0%
!!! TGAAGGTAAAGGTTTTTTAA+TGG - chr5_3:24164367-24164386 Msa0806250:intron 25.0%
!!! GTTTCTCATAGTTATTTTGT+AGG - chr5_3:24164392-24164411 Msa0806250:intron 25.0%
! ATTCAATATAGTTCATATGG+TGG + chr5_3:24164538-24164557 None:intergenic 25.0%
! TGCATTCAATATAGTTCATA+TGG + chr5_3:24164541-24164560 None:intergenic 25.0%
!! GAAAAGAATCATTTTATGGT+AGG - chr5_3:24164585-24164604 Msa0806250:intron 25.0%
!!! TAACCATGTATTTTAGCTTT+TGG - chr5_3:24164816-24164835 Msa0806250:intron 25.0%
!! CATGATTGTGATTTCATTTT+AGG - chr5_3:24164905-24164924 Msa0806250:intron 25.0%
! ACAAGAATATAGAAAGTGAA+GGG + chr5_3:24165059-24165078 None:intergenic 25.0%
! TACAAGAATATAGAAAGTGA+AGG + chr5_3:24165060-24165079 None:intergenic 25.0%
! AAATATTTAAACACCAGAGT+AGG + chr5_3:24165183-24165202 None:intergenic 25.0%
!!! TTTGATGATTATTTTGCCAT+TGG - chr5_3:24165217-24165236 Msa0806250:CDS 25.0%
! TATCAAGATCTAATTGTAAG+GGG + chr5_3:24165357-24165376 None:intergenic 25.0%
! CTATCAAGATCTAATTGTAA+GGG + chr5_3:24165358-24165377 None:intergenic 25.0%
! CTTACAATTAGATCTTGATA+GGG - chr5_3:24165357-24165376 Msa0806250:intron 25.0%
!!! TCTTCTTGAAATGTGTTTTT+TGG - chr5_3:24165809-24165828 Msa0806250:intron 25.0%
! GATGAATGCAAAATATTAGA+TGG + chr5_3:24165994-24166013 None:intergenic 25.0%
! TTTCAGAACAAATTAAGATG+GGG + chr5_3:24166127-24166146 None:intergenic 25.0%
!! CTTTTCAGAACAAATTAAGA+TGG + chr5_3:24166129-24166148 None:intergenic 25.0%
! CCAATAGAAATATGTACATA+TGG + chr5_3:24166251-24166270 None:intergenic 25.0%
!! CCATATGTACATATTTCTAT+TGG - chr5_3:24166248-24166267 Msa0806250:intron 25.0%
!! GAATTCTGAAGACATAAATA+AGG - chr5_3:24166281-24166300 Msa0806250:five_prime_UTR 25.0%
! AGACATAAATAAGGGTAATA+TGG - chr5_3:24166290-24166309 Msa0806250:five_prime_UTR 25.0%
! AAATCAAAAGAAGAGAACAA+TGG + chr5_3:24166424-24166443 None:intergenic 25.0%
TGTGAATAATAAGCGAAGAA+GGG + chr5_3:24158684-24158703 None:intergenic 30.0%
ATGTGAATAATAAGCGAAGA+AGG + chr5_3:24158685-24158704 None:intergenic 30.0%
! TTACTAGGGTTTAAGATATC+TGG - chr5_3:24158977-24158996 Msa0806250:three_prime_UTR 30.0%
!!! GCAATGTGATGGTTATTTTT+TGG - chr5_3:24159128-24159147 Msa0806250:three_prime_UTR 30.0%
!! GGTGTCAACTTAATTTGTAA+CGG - chr5_3:24159284-24159303 Msa0806250:intron 30.0%
AAGGACAAAAATCAAACTAG+CGG + chr5_3:24159553-24159572 None:intergenic 30.0%
AACTACTACCAAATACGAAA+AGG + chr5_3:24159572-24159591 None:intergenic 30.0%
ACATCGGAATAATGTTTCTT+CGG + chr5_3:24159688-24159707 None:intergenic 30.0%
! TATTCCGATGTTTTCACTAT+TGG - chr5_3:24159697-24159716 Msa0806250:three_prime_UTR 30.0%
TATATAGATGTTACAGATGC+AGG - chr5_3:24159893-24159912 Msa0806250:intron 30.0%
AGTAAATATTCCGTCAGAAA+AGG - chr5_3:24159980-24159999 Msa0806250:intron 30.0%
! AGAAGAATAACCTTTTCTGA+CGG + chr5_3:24159993-24160012 None:intergenic 30.0%
! TTTTACACGAACTCCTATTA+AGG + chr5_3:24160117-24160136 None:intergenic 30.0%
ATTAAGAAATGAAGGGCAAT+AGG - chr5_3:24160137-24160156 Msa0806250:three_prime_UTR 30.0%
TTAAGAAATGAAGGGCAATA+GGG - chr5_3:24160138-24160157 Msa0806250:three_prime_UTR 30.0%
! AATTGATTTATTATGGCCCT+AGG - chr5_3:24160214-24160233 Msa0806250:intron 30.0%
!! TTATGTTGGGTTGAAATACT+AGG - chr5_3:24160237-24160256 Msa0806250:intron 30.0%
TAGTTAAGGGATTAATCAGA+TGG - chr5_3:24160317-24160336 Msa0806250:three_prime_UTR 30.0%
CCAAACATGGAACTAATAAT+AGG + chr5_3:24160407-24160426 None:intergenic 30.0%
CCTATTATTAGTTCCATGTT+TGG - chr5_3:24160404-24160423 Msa0806250:intron 30.0%
TCAATTCTACCTTAAAGCTA+AGG - chr5_3:24160547-24160566 Msa0806250:three_prime_UTR 30.0%
CAATTCTACCTTAAAGCTAA+GGG - chr5_3:24160548-24160567 Msa0806250:three_prime_UTR 30.0%
TGATCTGATATAAGTAACAC+TGG + chr5_3:24160578-24160597 None:intergenic 30.0%
CTTCGATATTTCCAAAATAG+CGG + chr5_3:24161111-24161130 None:intergenic 30.0%
ATAACTCATCCTTACAAAAC+AGG - chr5_3:24161175-24161194 Msa0806250:three_prime_UTR 30.0%
! CTCTTTTCACAAATTCTCAT+CGG - chr5_3:24161219-24161238 Msa0806250:three_prime_UTR 30.0%
GGTATCATAGCTTATCAATT+TGG + chr5_3:24161334-24161353 None:intergenic 30.0%
!! ACGATTTTGACGATGAAAAA+AGG + chr5_3:24161542-24161561 None:intergenic 30.0%
! CTAAAAATACTAGGGACTTT+TGG + chr5_3:24162132-24162151 None:intergenic 30.0%
CTTGGAAGCTAAAAATACTA+GGG + chr5_3:24162140-24162159 None:intergenic 30.0%
ACTTGGAAGCTAAAAATACT+AGG + chr5_3:24162141-24162160 None:intergenic 30.0%
GAACGTAAAGTGATTATGTT+TGG + chr5_3:24162235-24162254 None:intergenic 30.0%
TAAAGTTAGGATGTTGTTGT+AGG - chr5_3:24162324-24162343 Msa0806250:intron 30.0%
! GATGTTGTTGTAGGTTATTT+TGG - chr5_3:24162333-24162352 Msa0806250:intron 30.0%
ATTGGAATAGAAATTCACAG+GGG + chr5_3:24162434-24162453 None:intergenic 30.0%
CTTAAATTTGAGTGCGAAAT+TGG + chr5_3:24162452-24162471 None:intergenic 30.0%
! ACAAAGCACTTAAACTTGTA+TGG + chr5_3:24162505-24162524 None:intergenic 30.0%
TTTGAACAACTATTCTTAGC+AGG - chr5_3:24162524-24162543 Msa0806250:intron 30.0%
TGTGTTTGCATCAAAAAAGA+GGG + chr5_3:24162609-24162628 None:intergenic 30.0%
TTGTGTTTGCATCAAAAAAG+AGG + chr5_3:24162610-24162629 None:intergenic 30.0%
!! TTTTTCAATTGCATGAACAC+TGG - chr5_3:24162719-24162738 Msa0806250:intron 30.0%
! AGTTGGTGCTTTAATGAAAT+AGG - chr5_3:24162800-24162819 Msa0806250:intron 30.0%
!! GACCAATTACTTTTCTTGTA+AGG - chr5_3:24162872-24162891 Msa0806250:intron 30.0%
GTCCTTACAAGAAAAGTAAT+TGG + chr5_3:24162877-24162896 None:intergenic 30.0%
TGGTTACAAACTTACAATTG+AGG - chr5_3:24162926-24162945 Msa0806250:intron 30.0%
TTACAATTGAGGTTATTCCA+TGG - chr5_3:24162937-24162956 Msa0806250:intron 30.0%
!!! TTTTTTTTATCACAGCCTTG+AGG - chr5_3:24163068-24163087 Msa0806250:intron 30.0%
!!! TTTTTTTATCACAGCCTTGA+GGG - chr5_3:24163069-24163088 Msa0806250:intron 30.0%
TAGTGTTAGATATCCAGTTT+GGG - chr5_3:24163116-24163135 Msa0806250:intron 30.0%
! TATAACATAGTTCTGTTGTG+TGG - chr5_3:24163435-24163454 Msa0806250:intron 30.0%
! TTATGGATTGTTGAGAGAAA+AGG + chr5_3:24163503-24163522 None:intergenic 30.0%
AGAACAGAAATACAAGGAAA+TGG + chr5_3:24163587-24163606 None:intergenic 30.0%
AAAGACAGAACAGAAATACA+AGG + chr5_3:24163593-24163612 None:intergenic 30.0%
CTGAATTTCTCTGTTTGATA+AGG - chr5_3:24163637-24163656 Msa0806250:intron 30.0%
!!! TCATGTTTTTTGTCTTTCTG+AGG - chr5_3:24163718-24163737 Msa0806250:intron 30.0%
! TGTGTTTCTGCAATATCAAA+AGG + chr5_3:24163797-24163816 None:intergenic 30.0%
CATGACTCAAAAAAAGAAAC+TGG - chr5_3:24163968-24163987 Msa0806250:intron 30.0%
AAAAAAGAAACTGGTTGTGT+CGG - chr5_3:24163977-24163996 Msa0806250:intron 30.0%
! TCACATTCCTTATTTCAGAA+AGG - chr5_3:24164054-24164073 Msa0806250:intron 30.0%
!! TGACTAACCTTTCTGAAATA+AGG + chr5_3:24164064-24164083 None:intergenic 30.0%
! AGTTAACCAAATCTTTTGGA+TGG - chr5_3:24164268-24164287 Msa0806250:intron 30.0%
! GTTAACCAAATCTTTTGGAT+GGG - chr5_3:24164269-24164288 Msa0806250:intron 30.0%
ATGATGTCTAAGAACTTAAC+AGG - chr5_3:24164316-24164335 Msa0806250:intron 30.0%
TGATGTCTAAGAACTTAACA+GGG - chr5_3:24164317-24164336 Msa0806250:intron 30.0%
AAAGCTAGAAGACAAAATGA+AGG - chr5_3:24164350-24164369 Msa0806250:intron 30.0%
AGAAGACAAAATGAAGGTAA+AGG - chr5_3:24164356-24164375 Msa0806250:intron 30.0%
GTCTCGAAGATTATTTATTG+AGG - chr5_3:24164457-24164476 Msa0806250:intron 30.0%
CTATATTGAATGCATGAATG+TGG - chr5_3:24164547-24164566 Msa0806250:intron 30.0%
GAAGAATGATGTGTAAACAA+TGG + chr5_3:24164631-24164650 None:intergenic 30.0%
! TGCTTCTTTTGATAAGTATG+TGG - chr5_3:24164727-24164746 Msa0806250:intron 30.0%
CAACCAAAAGCTAAAATACA+TGG + chr5_3:24164822-24164841 None:intergenic 30.0%
!! TTCATTTTAGGAAGCAAGAA+AGG - chr5_3:24164917-24164936 Msa0806250:intron 30.0%
!! TCATTTTAGGAAGCAAGAAA+GGG - chr5_3:24164918-24164937 Msa0806250:intron 30.0%
TTCTTCAGCTTCAGTTAAAA+CGG - chr5_3:24164967-24164986 Msa0806250:intron 30.0%
GGTGAGAAACAAATATTACA+GGG + chr5_3:24165149-24165168 None:intergenic 30.0%
TGGTGAGAAACAAATATTAC+AGG + chr5_3:24165150-24165169 None:intergenic 30.0%
CAAAACAAAATCACATCCAA+TGG + chr5_3:24165236-24165255 None:intergenic 30.0%
!!! TGGATGTGATTTTGTTTTGT+TGG - chr5_3:24165237-24165256 Msa0806250:intron 30.0%
TCTGTTTGCAATCAAGTTAA+TGG + chr5_3:24165315-24165334 None:intergenic 30.0%
CCTATCAAGATCTAATTGTA+AGG + chr5_3:24165359-24165378 None:intergenic 30.0%
CCTTACAATTAGATCTTGAT+AGG - chr5_3:24165356-24165375 Msa0806250:intron 30.0%
TTAGATCTTGATAGGGATAA+TGG - chr5_3:24165364-24165383 Msa0806250:intron 30.0%
TAGATCTTGATAGGGATAAT+GGG - chr5_3:24165365-24165384 Msa0806250:intron 30.0%
AATACCTGTGAAGTGTATAA+AGG + chr5_3:24165429-24165448 None:intergenic 30.0%
TGAACTCTTGAACATGATAT+CGG - chr5_3:24165605-24165624 Msa0806250:intron 30.0%
CAGAAAATGAGAAAAACATG+AGG + chr5_3:24165753-24165772 None:intergenic 30.0%
! GTATTATTTGAAACTTCCCA+GGG + chr5_3:24165780-24165799 None:intergenic 30.0%
! AGTATTATTTGAAACTTCCC+AGG + chr5_3:24165781-24165800 None:intergenic 30.0%
TTAAGATGGATGGTAAGTTA+TGG - chr5_3:24166173-24166192 Msa0806250:intron 30.0%
GTGAATAATAAGCGAAGAAG+GGG + chr5_3:24158683-24158702 None:intergenic 35.0%
ATGCGGAAATCGAAATCTTT+CGG + chr5_3:24158884-24158903 None:intergenic 35.0%
ATTGCAAGAACAACGAAATG+CGG + chr5_3:24158901-24158920 None:intergenic 35.0%
GATTTCAGTGAATGAATGTG+TGG - chr5_3:24159464-24159483 Msa0806250:three_prime_UTR 35.0%
! GGACTATTGACAATTTTTCG+AGG - chr5_3:24159659-24159678 Msa0806250:three_prime_UTR 35.0%
! TCACTATTGGTGGCTATAAA+TGG - chr5_3:24159710-24159729 Msa0806250:three_prime_UTR 35.0%
!! TATTGATTTAAACGTGCAGG+CGG - chr5_3:24159825-24159844 Msa0806250:intron 35.0%
!! TGAAATTTGCTCCCTTTTGT+GGG - chr5_3:24160073-24160092 Msa0806250:three_prime_UTR 35.0%
TTTCAACCCAACATAACCTA+GGG + chr5_3:24160233-24160252 None:intergenic 35.0%
ATTTCAACCCAACATAACCT+AGG + chr5_3:24160234-24160253 None:intergenic 35.0%
!! ACCCATTGATTCTGTAGTTA+AGG - chr5_3:24160303-24160322 Msa0806250:three_prime_UTR 35.0%
CCCTTAACTACAGAATCAAT+GGG + chr5_3:24160307-24160326 None:intergenic 35.0%
!! CCCATTGATTCTGTAGTTAA+GGG - chr5_3:24160304-24160323 Msa0806250:three_prime_UTR 35.0%
TCCCTTAACTACAGAATCAA+TGG + chr5_3:24160308-24160327 None:intergenic 35.0%
TTAAGGGATTAATCAGATGG+AGG - chr5_3:24160320-24160339 Msa0806250:three_prime_UTR 35.0%
ATGGAGGATAGTCTATTTGT+GGG - chr5_3:24160336-24160355 Msa0806250:three_prime_UTR 35.0%
GATTTGACCACACATTTGTT+AGG - chr5_3:24160460-24160479 Msa0806250:intron 35.0%
TTAGCTTCCAACTTCAACAT+TGG - chr5_3:24160510-24160529 Msa0806250:three_prime_UTR 35.0%
TTCCTCTATTCATGCCATTA+TGG - chr5_3:24161067-24161086 Msa0806250:three_prime_UTR 35.0%
TCCTCTATTCATGCCATTAT+GGG - chr5_3:24161068-24161087 Msa0806250:three_prime_UTR 35.0%
! CATATCGGTTATACCCATAA+TGG + chr5_3:24161084-24161103 None:intergenic 35.0%
! TTACAAAGGCCTGTTTTGTA+AGG + chr5_3:24161187-24161206 None:intergenic 35.0%
TTACAAAACAGGCCTTTGTA+AGG - chr5_3:24161186-24161205 Msa0806250:three_prime_UTR 35.0%
CGATGAGAATTTGTGAAAAG+AGG + chr5_3:24161221-24161240 None:intergenic 35.0%
ACCATGTTGAGATTGTATCT+CGG - chr5_3:24161351-24161370 Msa0806250:intron 35.0%
TGTATCTCGGTTGTTAATAG+CGG - chr5_3:24161364-24161383 Msa0806250:intron 35.0%
CATCGTCAAAATCGTACAAT+CGG - chr5_3:24161547-24161566 Msa0806250:intron 35.0%
GATTGTACTGTGAAAAACTG+AGG - chr5_3:24161678-24161697 Msa0806250:intron 35.0%
CATTTCAGCATTGTTAACAG+AGG - chr5_3:24161807-24161826 Msa0806250:intron 35.0%
GCTATACCGCTATATTGTAT+AGG + chr5_3:24161848-24161867 None:intergenic 35.0%
ATAACACTCGGGTATATGTT+TGG - chr5_3:24161888-24161907 Msa0806250:intron 35.0%
TGTGAATGTGTATGGTAACT+TGG + chr5_3:24162158-24162177 None:intergenic 35.0%
TTATCGAGAGTGGTAAAGTT+AGG - chr5_3:24162311-24162330 Msa0806250:intron 35.0%
TATGGAGGATATTGTCAAGA+AGG + chr5_3:24162487-24162506 None:intergenic 35.0%
AAGCACTTAAACTTGTATGG+AGG + chr5_3:24162502-24162521 None:intergenic 35.0%
TGTTTGCATCAAAAAAGAGG+GGG + chr5_3:24162607-24162626 None:intergenic 35.0%
GTGTTTGCATCAAAAAAGAG+GGG + chr5_3:24162608-24162627 None:intergenic 35.0%
GGTGCTTTAATGAAATAGGA+TGG - chr5_3:24162804-24162823 Msa0806250:intron 35.0%
CCTATACATGACATCTTCTA+CGG + chr5_3:24162851-24162870 None:intergenic 35.0%
TGACTCTTCTTAAAGTAACC+CGG + chr5_3:24162969-24162988 None:intergenic 35.0%
GTAGTGTTAGATATCCAGTT+TGG - chr5_3:24163115-24163134 Msa0806250:intron 35.0%
! ATCTTTTGTTGGAACCTAAG+AGG - chr5_3:24163257-24163276 Msa0806250:intron 35.0%
GGAGAGTTGAATACTTATGT+TGG - chr5_3:24163658-24163677 Msa0806250:intron 35.0%
!! CTTTCTGAGGATAACTTGTT+TGG - chr5_3:24163731-24163750 Msa0806250:intron 35.0%
GAATTGTATGATCCTAGTAG+AGG - chr5_3:24163875-24163894 Msa0806250:intron 35.0%
! TTTCAGAAAGGTTAGTCAGT+AGG - chr5_3:24164066-24164085 Msa0806250:intron 35.0%
! TTCAGAAAGGTTAGTCAGTA+GGG - chr5_3:24164067-24164086 Msa0806250:intron 35.0%
CATAAGACACATCCTTCTTT+CGG + chr5_3:24164114-24164133 None:intergenic 35.0%
ACTGAAAATGATATGCCATC+TGG - chr5_3:24164174-24164193 Msa0806250:intron 35.0%
CTGAAAATGATATGCCATCT+GGG - chr5_3:24164175-24164194 Msa0806250:intron 35.0%
TGTATCCCATCCAAAAGATT+TGG + chr5_3:24164277-24164296 None:intergenic 35.0%
ACCATACAGAAGTTGTTTGA+AGG - chr5_3:24164512-24164531 Msa0806250:intron 35.0%
!!! GGTAGGTATTTTTTGGCTTT+AGG - chr5_3:24164602-24164621 Msa0806250:intron 35.0%
TTTAACTGAAGCTGAAGAAC+AGG + chr5_3:24164966-24164985 None:intergenic 35.0%
AAATTCACAGAAGCCCAAAA+TGG + chr5_3:24165124-24165143 None:intergenic 35.0%
TTAATGGCCATTACAGTTAC+AGG + chr5_3:24165299-24165318 None:intergenic 35.0%
TGCAGACATAAGTTGTCAAT+CGG - chr5_3:24165680-24165699 Msa0806250:intron 35.0%
ATACCTGTCTATCTTACATG+TGG - chr5_3:24165885-24165904 Msa0806250:intron 35.0%
GCAACCACTTCTGTTTATAT+CGG - chr5_3:24166045-24166064 Msa0806250:intron 35.0%
CAACCACTTCTGTTTATATC+GGG - chr5_3:24166046-24166065 Msa0806250:intron 35.0%
TTTCCCGATATAAACAGAAG+TGG + chr5_3:24166052-24166071 None:intergenic 35.0%
!!! TGGTAAGTTATGGTTTTAGC+AGG - chr5_3:24166183-24166202 Msa0806250:intron 35.0%
!!! CTCTTTTAGAGTAGATGCAT+CGG + chr5_3:24166383-24166402 None:intergenic 35.0%
AGCATCAGTTGCGTTTACTA+CGG + chr5_3:24158630-24158649 None:intergenic 40.0%
AGGGTTTGCGAATGATGAAA+GGG + chr5_3:24158757-24158776 None:intergenic 40.0%
TAGGGTTTGCGAATGATGAA+AGG + chr5_3:24158758-24158777 None:intergenic 40.0%
ACGCGATTGATTACCTCTAA+CGG + chr5_3:24158835-24158854 None:intergenic 40.0%
GTAGCAACAGAATCTTGAAG+TGG - chr5_3:24159037-24159056 Msa0806250:three_prime_UTR 40.0%
ACAACAACAGCATCAGAGTT+AGG + chr5_3:24159080-24159099 None:intergenic 40.0%
! TCTGATGCTGTTGTTGTTGA+AGG - chr5_3:24159083-24159102 Msa0806250:three_prime_UTR 40.0%
CACATTGCATTACCTTCCAT+AGG + chr5_3:24159116-24159135 None:intergenic 40.0%
TGGAAGGTAATGCAATGTGA+TGG - chr5_3:24159117-24159136 Msa0806250:three_prime_UTR 40.0%
AGCAGAAAACACAAGTACAG+TGG - chr5_3:24159594-24159613 Msa0806250:intron 40.0%
! TCCGATGTTTTCACTATTGG+TGG - chr5_3:24159700-24159719 Msa0806250:three_prime_UTR 40.0%
GCCACCAATAGTGAAAACAT+CGG + chr5_3:24159704-24159723 None:intergenic 40.0%
GCAAATCTAGTCCAACCATA+AGG + chr5_3:24159926-24159945 None:intergenic 40.0%
!! CTGAAATTTGCTCCCTTTTG+TGG - chr5_3:24160072-24160091 Msa0806250:three_prime_UTR 40.0%
!! GAAATTTGCTCCCTTTTGTG+GGG - chr5_3:24160074-24160093 Msa0806250:three_prime_UTR 40.0%
ACATTTAGCACCCCACAAAA+GGG + chr5_3:24160087-24160106 None:intergenic 40.0%
AACATTTAGCACCCCACAAA+AGG + chr5_3:24160088-24160107 None:intergenic 40.0%
ATTATGGCCCTAGGTTATGT+TGG - chr5_3:24160223-24160242 Msa0806250:intron 40.0%
TTATGGCCCTAGGTTATGTT+GGG - chr5_3:24160224-24160243 Msa0806250:intron 40.0%
GATGGAGGATAGTCTATTTG+TGG - chr5_3:24160335-24160354 Msa0806250:three_prime_UTR 40.0%
TGGAGGATAGTCTATTTGTG+GGG - chr5_3:24160337-24160356 Msa0806250:three_prime_UTR 40.0%
TAACCCAAAGTGAATCTAGG+TGG + chr5_3:24160431-24160450 None:intergenic 40.0%
GACTAACCCAAAGTGAATCT+AGG + chr5_3:24160434-24160453 None:intergenic 40.0%
! GACCACACATTTGTTAGGTT+TGG - chr5_3:24160465-24160484 Msa0806250:intron 40.0%
AGCCAAACCTAACAAATGTG+TGG + chr5_3:24160470-24160489 None:intergenic 40.0%
GCAAGAACCAATGTTGAAGT+TGG + chr5_3:24160520-24160539 None:intergenic 40.0%
! AAATAGTGGAAGCCGCAAAA+CGG - chr5_3:24160616-24160635 Msa0806250:intron 40.0%
! TTCTCATCGGACTTTTGTCT+CGG + chr5_3:24160969-24160988 None:intergenic 40.0%
ACCCATAATGGCATGAATAG+AGG + chr5_3:24161072-24161091 None:intergenic 40.0%
CAAAATAGCGGCAAGCATAT+CGG + chr5_3:24161099-24161118 None:intergenic 40.0%
TTTGTATCGTCCGTTGAAGT+TGG - chr5_3:24161150-24161169 Msa0806250:three_prime_UTR 40.0%
TTGTATCGTCCGTTGAAGTT+GGG - chr5_3:24161151-24161170 Msa0806250:three_prime_UTR 40.0%
TGAGTTATGCCCAACTTCAA+CGG + chr5_3:24161163-24161182 None:intergenic 40.0%
TGAGAAAAGCCCAATAGTGT+AGG + chr5_3:24161250-24161269 None:intergenic 40.0%
GCTTAGTGCGTGTGTATAAT+TGG - chr5_3:24161300-24161319 Msa0806250:intron 40.0%
ACCGAGATACAATCTCAACA+TGG + chr5_3:24161355-24161374 None:intergenic 40.0%
!!! GCATCGCGTTTTGTCATTTT+AGG + chr5_3:24161416-24161435 None:intergenic 40.0%
!! GTACCCTTCATCCTTTTTCA+CGG - chr5_3:24161595-24161614 Msa0806250:intron 40.0%
TGACCGTGAAAAAGGATGAA+GGG + chr5_3:24161601-24161620 None:intergenic 40.0%
TTGACCGTGAAAAAGGATGA+AGG + chr5_3:24161602-24161621 None:intergenic 40.0%
TCTTCTCTTGACCGTGAAAA+AGG + chr5_3:24161609-24161628 None:intergenic 40.0%
TGTACTGTGAAAAACTGAGG+AGG - chr5_3:24161681-24161700 Msa0806250:intron 40.0%
AACAATGCTGAAATGCAGCA+CGG + chr5_3:24161802-24161821 None:intergenic 40.0%
TATGTTTGGATGGAAGGTCT+TGG - chr5_3:24161902-24161921 Msa0806250:intron 40.0%
! TTTGGGAGGAGAATTTTGGA+GGG + chr5_3:24162114-24162133 None:intergenic 40.0%
!! TTTTGGGAGGAGAATTTTGG+AGG + chr5_3:24162115-24162134 None:intergenic 40.0%
!! GACTTTTGGGAGGAGAATTT+TGG + chr5_3:24162118-24162137 None:intergenic 40.0%
! AAATACTAGGGACTTTTGGG+AGG + chr5_3:24162128-24162147 None:intergenic 40.0%
CTTTACCACTCTCGATAATC+TGG + chr5_3:24162309-24162328 None:intergenic 40.0%
ACTATTCTTAGCAGGAATGC+AGG - chr5_3:24162532-24162551 Msa0806250:intron 40.0%
CCGTAGAAGATGTCATGTAT+AGG - chr5_3:24162848-24162867 Msa0806250:intron 40.0%
GACTCTTCTTAAAGTAACCC+GGG + chr5_3:24162968-24162987 None:intergenic 40.0%
!! TGATGTGACCAGTTTGTTAC+AGG - chr5_3:24163184-24163203 Msa0806250:intron 40.0%
TGTTGGAACCTAAGAGGTTT+AGG - chr5_3:24163263-24163282 Msa0806250:intron 40.0%
TCTCTCTTCCTAAACCTCTT+AGG + chr5_3:24163274-24163293 None:intergenic 40.0%
AGAGAGACATGTCTCTTCTT+TGG - chr5_3:24163289-24163308 Msa0806250:intron 40.0%
GAGAGACATGTCTCTTCTTT+GGG - chr5_3:24163290-24163309 Msa0806250:intron 40.0%
AGAGACATGTCTCTTCTTTG+GGG - chr5_3:24163291-24163310 Msa0806250:intron 40.0%
GGATCATACAATTCAGCAAG+AGG + chr5_3:24163869-24163888 None:intergenic 40.0%
GGAAGATAGATGCATACTTG+AGG - chr5_3:24163907-24163926 Msa0806250:intron 40.0%
TGCGCAAAGATCTTGATTAC+TGG - chr5_3:24163942-24163961 Msa0806250:intron 40.0%
GCGCAAAGATCTTGATTACT+GGG - chr5_3:24163943-24163962 Msa0806250:intron 40.0%
!! TGTGTCGGTTTGAAAAACCA+AGG - chr5_3:24163992-24164011 Msa0806250:intron 40.0%
TCATGTAACAAGTAGCTCCT+TGG + chr5_3:24164012-24164031 None:intergenic 40.0%
! GGCATATCATTTTCAGTCGT+GGG + chr5_3:24164171-24164190 None:intergenic 40.0%
! TGGCATATCATTTTCAGTCG+TGG + chr5_3:24164172-24164191 None:intergenic 40.0%
ACAAACTCTGTAATGCCAGA+GGG + chr5_3:24164206-24164225 None:intergenic 40.0%
AACAAACTCTGTAATGCCAG+AGG + chr5_3:24164207-24164226 None:intergenic 40.0%
!! TATTGAGGCTTCCACTTTTC+AGG - chr5_3:24164472-24164491 Msa0806250:intron 40.0%
!! ATTGAGGCTTCCACTTTTCA+GGG - chr5_3:24164473-24164492 Msa0806250:intron 40.0%
GCCTTCAAACAACTTCTGTA+TGG + chr5_3:24164516-24164535 None:intergenic 40.0%
GATCTTCAGCTTGATGTCAA+AGG - chr5_3:24164689-24164708 Msa0806250:intron 40.0%
AAGTATCATGCAGAGCAGTA+TGG - chr5_3:24164776-24164795 Msa0806250:intron 40.0%
CCAGAGTAGGAAAAGAAGTT+TGG + chr5_3:24165170-24165189 None:intergenic 40.0%
! CCAAACTTCTTTTCCTACTC+TGG - chr5_3:24165167-24165186 Msa0806250:three_prime_UTR 40.0%
ATTGTAAGGGGAACTCATAG+CGG + chr5_3:24165345-24165364 None:intergenic 40.0%
GCAACCTTTATACACTTCAC+AGG - chr5_3:24165422-24165441 Msa0806250:CDS 40.0%
CATAAGTTGTCAATCGGAAG+TGG - chr5_3:24165686-24165705 Msa0806250:intron 40.0%
CAACTTAGCTATCTCTGACT+CGG + chr5_3:24165730-24165749 None:intergenic 40.0%
! TTCTCATTTTCTGACTTCCC+TGG - chr5_3:24165760-24165779 Msa0806250:intron 40.0%
! TCTCATTTTCTGACTTCCCT+GGG - chr5_3:24165761-24165780 Msa0806250:intron 40.0%
TATCTTACATGTGGCGATGT+AGG - chr5_3:24165894-24165913 Msa0806250:intron 40.0%
!!! GGGAAGATGGGTTTTGGTTT+GGG + chr5_3:24158663-24158682 None:intergenic 45.0%
!! AAGAAGGGGAAGATGGGTTT+TGG + chr5_3:24158669-24158688 None:intergenic 45.0%
TAAGCGAAGAAGGGGAAGAT+GGG + chr5_3:24158675-24158694 None:intergenic 45.0%
ATAAGCGAAGAAGGGGAAGA+TGG + chr5_3:24158676-24158695 None:intergenic 45.0%
TGAAGCGAGCGAAGAAACTA+GGG + chr5_3:24158776-24158795 None:intergenic 45.0%
ATGAAGCGAGCGAAGAAACT+AGG + chr5_3:24158777-24158796 None:intergenic 45.0%
CGATTGATTACCTCTAACGG+AGG + chr5_3:24158832-24158851 None:intergenic 45.0%
TGTTGAAGGTCCTCAACCTA+TGG - chr5_3:24159097-24159116 Msa0806250:three_prime_UTR 45.0%
GCATTACCTTCCATAGGTTG+AGG + chr5_3:24159110-24159129 None:intergenic 45.0%
GATGAATGTGCGCAACGAAA+TGG - chr5_3:24159263-24159282 Msa0806250:intron 45.0%
CAGTTGAAGATCCGCCAATT+GGG - chr5_3:24159626-24159645 Msa0806250:intron 45.0%
CATGTGAATCTCCCAATTGG+CGG + chr5_3:24159640-24159659 None:intergenic 45.0%
GTCCATGTGAATCTCCCAAT+TGG + chr5_3:24159643-24159662 None:intergenic 45.0%
TGGATTAACAGCGTCAGAAG+TGG + chr5_3:24159745-24159764 None:intergenic 45.0%
CGGATACTGATCTTTCCGAA+GGG - chr5_3:24159845-24159864 Msa0806250:intron 45.0%
GGATACTGATCTTTCCGAAG+GGG - chr5_3:24159846-24159865 Msa0806250:intron 45.0%
TGTTCAGCATTGTTCCCCTT+CGG + chr5_3:24159863-24159882 None:intergenic 45.0%
TGCACAGTTCAGCTTAACTG+TGG - chr5_3:24159943-24159962 Msa0806250:intron 45.0%
CAGCTTAACTGTGGTCAATC+AGG - chr5_3:24159952-24159971 Msa0806250:intron 45.0%
AATGAAGGGCAATAGGGTCT+TGG - chr5_3:24160144-24160163 Msa0806250:intron 45.0%
GAATCTAGGTGGTCCAAACA+TGG + chr5_3:24160420-24160439 None:intergenic 45.0%
TGGACCACCTAGATTCACTT+TGG - chr5_3:24160424-24160443 Msa0806250:intron 45.0%
GGACCACCTAGATTCACTTT+GGG - chr5_3:24160425-24160444 Msa0806250:intron 45.0%
!! CTGGCATACCCTTAGCTTTA+AGG + chr5_3:24160559-24160578 None:intergenic 45.0%
! TCTCATCGGACTTTTGTCTC+GGG + chr5_3:24160968-24160987 None:intergenic 45.0%
! CGATATGCTTGCCGCTATTT+TGG - chr5_3:24161097-24161116 Msa0806250:three_prime_UTR 45.0%
AAACAGGCCTTTGTAAGGTG+AGG - chr5_3:24161191-24161210 Msa0806250:three_prime_UTR 45.0%
AGGTACTCCTCACCTTACAA+AGG + chr5_3:24161201-24161220 None:intergenic 45.0%
ATCGGAGAGTCCTACACTAT+TGG - chr5_3:24161237-24161256 Msa0806250:three_prime_UTR 45.0%
TCGGAGAGTCCTACACTATT+GGG - chr5_3:24161238-24161257 Msa0806250:three_prime_UTR 45.0%
GCACTAAGCCCAATAGTGTT+GGG + chr5_3:24161289-24161308 None:intergenic 45.0%
GCGTGTGTATAATTGGTCAG+TGG - chr5_3:24161307-24161326 Msa0806250:intron 45.0%
TTTGGAGAAAGCGAGTGAAG+CGG - chr5_3:24161455-24161474 Msa0806250:intron 45.0%
GAGGAGGAGAAGTGAATGAA+AGG - chr5_3:24161697-24161716 Msa0806250:intron 45.0%
!! GCGGTATAGCGCTGATATAT+TGG - chr5_3:24161858-24161877 Msa0806250:intron 45.0%
CACTCGGGTATATGTTTGGA+TGG - chr5_3:24161892-24161911 Msa0806250:intron 45.0%
CGGGTATATGTTTGGATGGA+AGG - chr5_3:24161896-24161915 Msa0806250:intron 45.0%
TTTGGATGGAAGGTCTTGGA+GGG - chr5_3:24161906-24161925 Msa0806250:intron 45.0%
!! TTGGGAGGAGAATTTTGGAG+GGG + chr5_3:24162113-24162132 None:intergenic 45.0%
TGTTGCCAGATTATCGAGAG+TGG - chr5_3:24162301-24162320 Msa0806250:intron 45.0%
GTCACAAAGATCTCTTCCTC+TGG - chr5_3:24162985-24163004 Msa0806250:intron 45.0%
AGATCTCTTCCTCTGGTCAT+AGG - chr5_3:24162992-24163011 Msa0806250:intron 45.0%
! CAAAAATAGCCTTGCCCTCA+AGG + chr5_3:24163086-24163105 None:intergenic 45.0%
!!! GGGCAAGGCTATTTTTGTAG+CGG - chr5_3:24163089-24163108 Msa0806250:intron 45.0%
!!! AAGGCTATTTTTGTAGCGGC+AGG - chr5_3:24163093-24163112 Msa0806250:intron 45.0%
!! AAGTGGGCTGGATAGGAAAT+GGG - chr5_3:24163151-24163170 Msa0806250:intron 45.0%
!! TGTGACCAGTTTGTTACAGG+AGG - chr5_3:24163187-24163206 Msa0806250:intron 45.0%
!! CAGTTTGTTACAGGAGGATC+CGG - chr5_3:24163193-24163212 Msa0806250:intron 45.0%
!! AGTTTGTTACAGGAGGATCC+GGG - chr5_3:24163194-24163213 Msa0806250:intron 45.0%
TTAATGCGCGTGAGAGTGAT+TGG - chr5_3:24163825-24163844 Msa0806250:intron 45.0%
TAATGCGCGTGAGAGTGATT+GGG - chr5_3:24163826-24163845 Msa0806250:intron 45.0%
TCCTAGTAGAGGCTATGTTG+TGG - chr5_3:24163886-24163905 Msa0806250:intron 45.0%
TCCACAACATAGCCTCTACT+AGG + chr5_3:24163890-24163909 None:intergenic 45.0%
CACAACAGTTCCCTGAAAAG+TGG + chr5_3:24164486-24164505 None:intergenic 45.0%
!! CACTTTTCAGGGAACTGTTG+TGG - chr5_3:24164484-24164503 Msa0806250:intron 45.0%
TTTCAGGGAACTGTTGTGGA+AGG - chr5_3:24164488-24164507 Msa0806250:intron 45.0%
TGTGGAAGTAGAACAGCTTG+AGG - chr5_3:24164745-24164764 Msa0806250:intron 45.0%
GTGGAAGTAGAACAGCTTGA+GGG - chr5_3:24164746-24164765 Msa0806250:intron 45.0%
TGCAGAGCAGTATGGTTTAC+AGG - chr5_3:24164784-24164803 Msa0806250:intron 45.0%
AACTGAAGCTGAAGAACAGG+TGG + chr5_3:24164963-24164982 None:intergenic 45.0%
! TGATTTTGCGCGAGACACTA+TGG - chr5_3:24164998-24165017 Msa0806250:intron 45.0%
TTCGACGCCTGTAACTGTAA+TGG - chr5_3:24165289-24165308 Msa0806250:intron 45.0%
CTTGACACTGATGCATCTAG+CGG + chr5_3:24165582-24165601 None:intergenic 45.0%
TTGTCAATCGGAAGTGGAGA+TGG - chr5_3:24165692-24165711 Msa0806250:intron 45.0%
TCGCCACATGTAAGATAGAC+AGG + chr5_3:24165891-24165910 None:intergenic 45.0%
!! TGTAGGCTTTGAAGAGACGT+TGG - chr5_3:24165911-24165930 Msa0806250:intron 45.0%
GTAAAGCTTGTGCACTGCAT+AGG - chr5_3:24165949-24165968 Msa0806250:intron 45.0%
AGTAGATGCATCGGAAACAC+AGG + chr5_3:24166374-24166393 None:intergenic 45.0%
!!! GGGGAAGATGGGTTTTGGTT+TGG + chr5_3:24158664-24158683 None:intergenic 50.0%
! AGGAGTGGTGGTGATAGTCA+TGG + chr5_3:24158812-24158831 None:intergenic 50.0%
GATTACCTCTAACGGAGGAG+TGG + chr5_3:24158827-24158846 None:intergenic 50.0%
GAAGGTCCTCAACCTATGGA+AGG - chr5_3:24159101-24159120 Msa0806250:three_prime_UTR 50.0%
CACAAGTACAGTGGATGCTG+TGG - chr5_3:24159603-24159622 Msa0806250:intron 50.0%
GCAGTTGAAGATCCGCCAAT+TGG - chr5_3:24159625-24159644 Msa0806250:intron 50.0%
CGCCAATTGGGAGATTCACA+TGG - chr5_3:24159638-24159657 Msa0806250:intron 50.0%
GCGGATACTGATCTTTCCGA+AGG - chr5_3:24159844-24159863 Msa0806250:intron 50.0%
GATGCAGGTTCGATGCCTTA+TGG - chr5_3:24159908-24159927 Msa0806250:intron 50.0%
CAGGTTCGATGCCTTATGGT+TGG - chr5_3:24159912-24159931 Msa0806250:intron 50.0%
GCAATAGGGTCTTGGCAGTT+TGG - chr5_3:24160152-24160171 Msa0806250:intron 50.0%
! AATAGTGTTGGGCGCAAGGA+GGG + chr5_3:24161278-24161297 None:intergenic 50.0%
TCCTTGCGCCCAACACTATT+GGG - chr5_3:24161278-24161297 Msa0806250:intron 50.0%
CGCACTAAGCCCAATAGTGT+TGG + chr5_3:24161290-24161309 None:intergenic 50.0%
TTGTTAATAGCGGCCGCTAC+CGG - chr5_3:24161374-24161393 Msa0806250:intron 50.0%
TGGCCAAAATCGGGTCTAAG+CGG - chr5_3:24161499-24161518 Msa0806250:intron 50.0%
AAGCGTATACTCCGATCCAG+CGG + chr5_3:24161575-24161594 None:intergenic 50.0%
GTTTGGATGGAAGGTCTTGG+AGG - chr5_3:24161905-24161924 Msa0806250:intron 50.0%
TTGGATGGAAGGTCTTGGAG+GGG - chr5_3:24161907-24161926 Msa0806250:intron 50.0%
!! GAGGAGAATTTTGGAGGGGA+GGG + chr5_3:24162109-24162128 None:intergenic 50.0%
CACAGGGGAACAAAACAGAC+TGG + chr5_3:24162419-24162438 None:intergenic 50.0%
GGTTATTCCATGGTCATGCC+CGG - chr5_3:24162947-24162966 Msa0806250:intron 50.0%
GTTATTCCATGGTCATGCCC+GGG - chr5_3:24162948-24162967 Msa0806250:intron 50.0%
TTATCACAGCCTTGAGGGCA+AGG - chr5_3:24163074-24163093 Msa0806250:intron 50.0%
TCCTATCCAGCCCACTTGTT+GGG + chr5_3:24163148-24163167 None:intergenic 50.0%
TTCCTATCCAGCCCACTTGT+TGG + chr5_3:24163149-24163168 None:intergenic 50.0%
!! CAAGTGGGCTGGATAGGAAA+TGG - chr5_3:24163150-24163169 Msa0806250:intron 50.0%
CGGATCCTCCTGTAACAAAC+TGG + chr5_3:24163195-24163214 None:intergenic 50.0%
AATGCGCGTGAGAGTGATTG+GGG - chr5_3:24163827-24163846 Msa0806250:intron 50.0%
TGCGCGAGACACTATGGTAA+AGG - chr5_3:24165004-24165023 Msa0806250:intron 50.0%
CGAATACTTCTGTCTGCGTC+AGG + chr5_3:24165403-24165422 None:intergenic 50.0%
CATGATATCGGAAGCTGCAG+TGG - chr5_3:24165617-24165636 Msa0806250:intron 50.0%
GGAGATTGATGCTCTTGCAG+AGG - chr5_3:24165638-24165657 Msa0806250:intron 50.0%
TACCTCTAACGGAGGAGTGG+TGG + chr5_3:24158824-24158843 None:intergenic 55.0%
! CAATAGTGTTGGGCGCAAGG+AGG + chr5_3:24161279-24161298 None:intergenic 55.0%
CTCCTTGCGCCCAACACTAT+TGG - chr5_3:24161277-24161296 Msa0806250:intron 55.0%
AAACGCGATGCAGCGCTACA+AGG - chr5_3:24161425-24161444 Msa0806250:intron 55.0%
CGAGTGAAGCGGCCGATATT+CGG - chr5_3:24161466-24161485 Msa0806250:intron 55.0%
!! AATCGTACAATCGGTGCCGC+TGG - chr5_3:24161556-24161575 Msa0806250:intron 55.0%
!! TACAATCGGTGCCGCTGGAT+CGG - chr5_3:24161561-24161580 Msa0806250:intron 55.0%
!! GGAGGAGAATTTTGGAGGGG+AGG + chr5_3:24162110-24162129 None:intergenic 55.0%
GAGGGGGAAAGAACTGTGTG+AGG + chr5_3:24162591-24162610 None:intergenic 55.0%
AAGTAACCCGGGCATGACCA+TGG + chr5_3:24162957-24162976 None:intergenic 55.0%
CTCTTCCTCTGGTCATAGGC+TGG - chr5_3:24162996-24163015 Msa0806250:intron 55.0%
TCTGTCCAGCCTATGACCAG+AGG + chr5_3:24163004-24163023 None:intergenic 55.0%
ACAGGAGGATCCGGGCATTT+AGG - chr5_3:24163202-24163221 Msa0806250:intron 55.0%
CAGGAGGATCCGGGCATTTA+GGG - chr5_3:24163203-24163222 Msa0806250:intron 55.0%
GATCCGGGCATTTAGGGAGA+GGG - chr5_3:24163209-24163228 Msa0806250:intron 55.0%
ATCCGGGCATTTAGGGAGAG+GGG - chr5_3:24163210-24163229 Msa0806250:intron 55.0%
ATCCCCTCTCCCTAAATGCC+CGG + chr5_3:24163215-24163234 None:intergenic 55.0%
CACTGATGCATCTAGCGGTG+CGG + chr5_3:24165577-24165596 None:intergenic 55.0%
CACCACCACTCCTCCGTTAG+AGG - chr5_3:24158819-24158838 Msa0806250:three_prime_UTR 60.0%
! GCCCAATAGTGTTGGGCGCA+AGG + chr5_3:24161282-24161301 None:intergenic 60.0%
! GCGCTACAAGGTGGAGCGTT+TGG - chr5_3:24161437-24161456 Msa0806250:intron 60.0%
GTGAAGCGGCCGATATTCGG+TGG - chr5_3:24161469-24161488 Msa0806250:intron 60.0%
CACCCCGCTCCACCGAATAT+CGG + chr5_3:24161481-24161500 None:intergenic 60.0%
TGGAGCGGGGTGGCCAAAAT+CGG - chr5_3:24161489-24161508 Msa0806250:intron 60.0%
! CGGCCGCTTAGACCCGATTT+TGG + chr5_3:24161505-24161524 None:intergenic 60.0%
! CGTAGCAGGCGCTATTTCGG+CGG + chr5_3:24161777-24161796 None:intergenic 60.0%
GCGCGTAGCAGGCGCTATTT+CGG + chr5_3:24161780-24161799 None:intergenic 60.0%
GATGGAAGGTCTTGGAGGGG+AGG - chr5_3:24161910-24161929 Msa0806250:intron 60.0%
!! CTTGGAGGGGAGGCGTCATT+AGG - chr5_3:24161920-24161939 Msa0806250:intron 60.0%
!! GCCCAACAAGTGGGCTGGAT+AGG - chr5_3:24163144-24163163 Msa0806250:intron 60.0%
GGATCCGGGCATTTAGGGAG+AGG - chr5_3:24163208-24163227 Msa0806250:intron 60.0%
GGGCATTTAGGGAGAGGGGA+TGG - chr5_3:24163214-24163233 Msa0806250:intron 60.0%
GGGAGAGGGGATGGAGAGAA+AGG - chr5_3:24163223-24163242 Msa0806250:intron 60.0%
TCTAGCGGTGCGGATGCAAG+TGG + chr5_3:24165567-24165586 None:intergenic 60.0%
CGCGATGCAGCGCTACAAGG+TGG - chr5_3:24161428-24161447 Msa0806250:intron 65.0%
! GCGGCCGATATTCGGTGGAG+CGG - chr5_3:24161474-24161493 Msa0806250:intron 65.0%
! CGGCCGATATTCGGTGGAGC+GGG - chr5_3:24161475-24161494 Msa0806250:intron 65.0%
! GGCCGATATTCGGTGGAGCG+GGG - chr5_3:24161476-24161495 Msa0806250:intron 65.0%
! CGATATTCGGTGGAGCGGGG+TGG - chr5_3:24161479-24161498 Msa0806250:intron 65.0%
GGAGCGGGGTGGCCAAAATC+GGG - chr5_3:24161490-24161509 Msa0806250:intron 65.0%
AATGCAGCACGGCGCGTAGC+AGG + chr5_3:24161791-24161810 None:intergenic 65.0%
!! TGTTGGGCGTCGGCCCAAAC+TGG + chr5_3:24163132-24163151 None:intergenic 65.0%
TTGGGCCGACGCCCAACAAG+TGG - chr5_3:24163134-24163153 Msa0806250:intron 65.0%
TGGGCCGACGCCCAACAAGT+GGG - chr5_3:24163135-24163154 Msa0806250:intron 65.0%
! CCAGCCCACTTGTTGGGCGT+CGG + chr5_3:24163142-24163161 None:intergenic 65.0%
!! GCCATCTGGGAGCATCCCTC+TGG - chr5_3:24164188-24164207 Msa0806250:intron 65.0%
GCCAGAGGGATGCTCCCAGA+TGG + chr5_3:24164192-24164211 None:intergenic 65.0%
!! GGCCGCTACCGGTGCTATCG+CGG - chr5_3:24161385-24161404 Msa0806250:intron 70.0%
!! CGCCGCGATAGCACCGGTAG+CGG + chr5_3:24161390-24161409 None:intergenic 70.0%
!! CTACCGGTGCTATCGCGGCG+CGG - chr5_3:24161390-24161409 Msa0806250:intron 70.0%
CCGACGCCCAACAAGTGGGC+TGG - chr5_3:24163139-24163158 Msa0806250:intron 70.0%
AGGCCGCGCCGCGATAGCAC+CGG + chr5_3:24161396-24161415 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 24158622 24166467 24158622 ID=Msa0806250;Name=Msa0806250
chr5_3 mRNA 24158622 24166467 24158622 ID=Msa0806250-mRNA-1;Parent=Msa0806250;Name=Msa0806250-mRNA-1;_AED=0.17;_eAED=0.17;_QI=169|0.91|0.92|1|0.58|0.53|13|1731|88
chr5_3 exon 24158622 24159204 24158622 ID=Msa0806250-mRNA-1:exon:9350;Parent=Msa0806250-mRNA-1
chr5_3 exon 24159430 24159536 24159430 ID=Msa0806250-mRNA-1:exon:9349;Parent=Msa0806250-mRNA-1
chr5_3 exon 24159646 24159755 24159646 ID=Msa0806250-mRNA-1:exon:9348;Parent=Msa0806250-mRNA-1
chr5_3 exon 24160064 24160162 24160064 ID=Msa0806250-mRNA-1:exon:9347;Parent=Msa0806250-mRNA-1
chr5_3 exon 24160284 24160399 24160284 ID=Msa0806250-mRNA-1:exon:9346;Parent=Msa0806250-mRNA-1
chr5_3 exon 24160487 24160595 24160487 ID=Msa0806250-mRNA-1:exon:9345;Parent=Msa0806250-mRNA-1
chr5_3 exon 24160718 24160936 24160718 ID=Msa0806250-mRNA-1:exon:9344;Parent=Msa0806250-mRNA-1
chr5_3 exon 24161014 24161279 24161014 ID=Msa0806250-mRNA-1:exon:9343;Parent=Msa0806250-mRNA-1
chr5_3 exon 24165088 24165245 24165088 ID=Msa0806250-mRNA-1:exon:9342;Parent=Msa0806250-mRNA-1
chr5_3 exon 24165384 24165502 24165384 ID=Msa0806250-mRNA-1:exon:9341;Parent=Msa0806250-mRNA-1
chr5_3 exon 24165967 24166048 24165967 ID=Msa0806250-mRNA-1:exon:9340;Parent=Msa0806250-mRNA-1
chr5_3 exon 24166249 24166386 24166249 ID=Msa0806250-mRNA-1:exon:9339;Parent=Msa0806250-mRNA-1
chr5_3 exon 24166407 24166467 24166407 ID=Msa0806250-mRNA-1:exon:9338;Parent=Msa0806250-mRNA-1
chr5_3 five_prime_UTR 24166407 24166467 24166407 ID=Msa0806250-mRNA-1:five_prime_utr;Parent=Msa0806250-mRNA-1
chr5_3 five_prime_UTR 24166279 24166386 24166279 ID=Msa0806250-mRNA-1:five_prime_utr;Parent=Msa0806250-mRNA-1
chr5_3 CDS 24166249 24166278 24166249 ID=Msa0806250-mRNA-1:cds;Parent=Msa0806250-mRNA-1
chr5_3 CDS 24165967 24166048 24165967 ID=Msa0806250-mRNA-1:cds;Parent=Msa0806250-mRNA-1
chr5_3 CDS 24165384 24165502 24165384 ID=Msa0806250-mRNA-1:cds;Parent=Msa0806250-mRNA-1
chr5_3 CDS 24165210 24165245 24165210 ID=Msa0806250-mRNA-1:cds;Parent=Msa0806250-mRNA-1
chr5_3 three_prime_UTR 24165088 24165209 24165088 ID=Msa0806250-mRNA-1:three_prime_utr;Parent=Msa0806250-mRNA-1
chr5_3 three_prime_UTR 24161014 24161279 24161014 ID=Msa0806250-mRNA-1:three_prime_utr;Parent=Msa0806250-mRNA-1
chr5_3 three_prime_UTR 24160718 24160936 24160718 ID=Msa0806250-mRNA-1:three_prime_utr;Parent=Msa0806250-mRNA-1
chr5_3 three_prime_UTR 24160487 24160595 24160487 ID=Msa0806250-mRNA-1:three_prime_utr;Parent=Msa0806250-mRNA-1
chr5_3 three_prime_UTR 24160284 24160399 24160284 ID=Msa0806250-mRNA-1:three_prime_utr;Parent=Msa0806250-mRNA-1
chr5_3 three_prime_UTR 24160064 24160162 24160064 ID=Msa0806250-mRNA-1:three_prime_utr;Parent=Msa0806250-mRNA-1
chr5_3 three_prime_UTR 24159646 24159755 24159646 ID=Msa0806250-mRNA-1:three_prime_utr;Parent=Msa0806250-mRNA-1
chr5_3 three_prime_UTR 24159430 24159536 24159430 ID=Msa0806250-mRNA-1:three_prime_utr;Parent=Msa0806250-mRNA-1
chr5_3 three_prime_UTR 24158622 24159204 24158622 ID=Msa0806250-mRNA-1:three_prime_utr;Parent=Msa0806250-mRNA-1
Gene Sequence

>Msa0806250

ATGACTATCACCACCACTCCTCCGTTAGAGCAACAGAATCTTGAAGTGGATACTGAGATGCTTGTTCCTAACTCTGATGCTGTTGTTGTTGAAGGTCCTCAACCTATGGAAGTAGTTCAAGCAGAAAACACAAGTACAGTGGATGCTGTGGCAGTTGAAGATCCGCCAATTGGGAGATTCACATGGACTATTGACAATTTTTCGAGGCTTCCGAAGAAACATTATTCCGATGCGGATACTGATCTTTCCGAAGGGGAACAATGCTGA
Protein sequence

>Msa0806250

MTITTTPPLEQQNLEVDTEMLVPNSDAVVVEGPQPMEVVQAENTSTVDAVAVEDPPIGRFTWTIDNFSRLPKKHYSDADTDLSEGEQC*