AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0806260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0806260 MtrunA17_Chr1g0170261 97.973 148 3 0 1 148 299 446 2.95e-98 306
Msa0806260 MtrunA17_Chr5g0439971 92.568 148 11 0 1 148 302 449 1.62e-93 293
Msa0806260 MtrunA17_Chr3g0119031 92.568 148 11 0 1 148 297 444 2.68e-93 292
Msa0806260 MtrunA17_Chr3g0138791 34.746 118 73 2 10 123 213 330 1.32e-12 64.7
Msa0806260 MtrunA17_Chr1g0148321 33.051 118 75 2 10 123 213 330 1.20e-11 62.0
Msa0806260 MtrunA17_Chr5g0427301 31.061 132 81 4 14 143 666 789 2.08e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0806260 AT5G06600.3 89.189 148 16 0 1 148 297 444 4.16e-91 285
Msa0806260 AT5G06600.2 89.189 148 16 0 1 148 296 443 2.00e-90 285
Msa0806260 AT5G06600.1 89.189 148 16 0 1 148 297 444 2.13e-90 285
Msa0806260 AT3G11910.3 89.189 148 16 0 1 148 296 443 5.50e-90 284
Msa0806260 AT3G11910.1 89.189 148 16 0 1 148 296 443 5.50e-90 284
Msa0806260 AT3G11910.4 89.189 148 16 0 1 148 295 442 5.68e-90 284
Msa0806260 AT3G11910.2 89.189 148 16 0 1 148 295 442 5.68e-90 284
Msa0806260 AT3G49600.3 32.000 125 81 2 3 123 204 328 1.54e-12 65.1
Msa0806260 AT3G49600.2 32.000 125 81 2 3 123 204 328 1.54e-12 65.1
Msa0806260 AT3G49600.1 32.000 125 81 2 3 123 204 328 1.54e-12 65.1
Msa0806260 AT2G22310.2 28.455 123 87 1 10 131 130 252 8.79e-11 59.3
Msa0806260 AT2G22310.3 28.455 123 87 1 10 131 135 257 9.82e-11 59.3

Find 120 sgRNAs with CRISPR-Local

Find 769 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATCATTTCAATATTCTT+TGG 0.266276 5_3:-24238652 None:intergenic
TCACTATTGGTGGCTATAAA+TGG 0.267592 5_3:+24232286 Msa0806260:five_prime_UTR
AAAGAGTTAACCAAATCTTT+TGG 0.276067 5_3:+24236831 Msa0806260:five_prime_UTR
CCTTACAATTAGATCTTGAT+AGG 0.285562 5_3:+24237924 Msa0806260:CDS
TGACTAACCTTTCTGAAATA+AGG 0.285682 5_3:-24236628 None:intergenic
GCAACCACTTCTGTTTATAT+CGG 0.291404 5_3:+24238618 Msa0806260:three_prime_UTR
ATGATGTCTAAGAACTTAAC+AGG 0.300249 5_3:+24236883 Msa0806260:five_prime_UTR
GAATTCTGAAGACATAAATA+AGG 0.300558 5_3:+24243110 Msa0806260:three_prime_UTR
AAGAAGGGGAAGATGGGTTT+TGG 0.304871 5_3:-24231245 None:intergenic
AGACATAAATAAGGGTAATA+TGG 0.305906 5_3:+24243119 Msa0806260:three_prime_UTR
TTAGATCTTGATAGGGATAA+TGG 0.306686 5_3:+24237932 Msa0806260:CDS
CACCACCACTCCTCCGTTAG+AGG 0.318183 5_3:+24231398 Msa0806260:five_prime_UTR
CCATATGTACATATTTCTAT+TGG 0.319865 5_3:+24243077 Msa0806260:three_prime_UTR
TGCAGAGCAGTATGGTTTAC+AGG 0.343261 5_3:+24237351 Msa0806260:CDS
TCTGATGCTGTTGTTGTTGA+AGG 0.347454 5_3:+24231659 Msa0806260:five_prime_UTR
AATACCTGTGAAGTGTATAA+AGG 0.350377 5_3:-24237994 None:intergenic
CAGCTTAACTGTGGTCAATC+AGG 0.357604 5_3:+24232528 Msa0806260:five_prime_UTR
GATGAATGCAAAATATTAGA+TGG 0.360835 5_3:-24238564 None:intergenic
TGCATTCAATATAGTTCATA+TGG 0.361714 5_3:-24237105 None:intergenic
TGTATCCCATCCAAAAGATT+TGG 0.366228 5_3:-24236841 None:intergenic
ATCTTATATATTAGTTAAGA+TGG 0.371000 5_3:+24238732 Msa0806260:three_prime_UTR
GATGCAGGTTCGATGCCTTA+TGG 0.373749 5_3:+24232484 Msa0806260:five_prime_UTR
GATGAAGCGAGCGAAGAAAC+TGG 0.382439 5_3:-24231354 None:intergenic
GTAAAGCTTGTGCACTTCAT+AGG 0.391326 5_3:+24238522 Msa0806260:three_prime_UTR
TTAATGCGCGTGAGAGTGAT+TGG 0.411208 5_3:+24236392 Msa0806260:five_prime_UTR
CAACCACTTCTGTTTATATC+GGG 0.418388 5_3:+24238619 Msa0806260:three_prime_UTR
ACAACAACAGCATCAGAGTT+AGG 0.423777 5_3:-24231653 None:intergenic
CCAATAGAAATATGTACATA+TGG 0.426098 5_3:-24243077 None:intergenic
CCTATCAAGATCTAATTGTA+AGG 0.427249 5_3:-24237924 None:intergenic
CGAATACTTCTATCTGCGTT+AGG 0.429494 5_3:-24237968 None:intergenic
ACATCGGAATAATGTTTCTT+CGG 0.432526 5_3:-24232261 None:intergenic
TAGATCTTGATAGGGATAAT+GGG 0.437845 5_3:+24237933 Msa0806260:CDS
CTCCTAACTGAACATGATAT+CGG 0.438360 5_3:+24238178 Msa0806260:three_prime_UTR
GCAGTTGAAGATCCGCCAAT+TGG 0.442781 5_3:+24232201 Msa0806260:five_prime_UTR
TTCCGATATCATGTTCAGTT+AGG 0.442966 5_3:-24238180 None:intergenic
TTCTTCAGCTTCAGTTAAAA+CGG 0.445451 5_3:+24237535 Msa0806260:CDS
TTAAGATGGATGGTAAGTTA+TGG 0.451746 5_3:+24238746 Msa0806260:three_prime_UTR
AAGTATCATGCAGAGCAGTA+TGG 0.452897 5_3:+24237343 Msa0806260:CDS
TAATGCGCGTGAGAGTGATT+GGG 0.455780 5_3:+24236393 Msa0806260:five_prime_UTR
TATATAGATGTTACAGATGC+AGG 0.456399 5_3:+24232469 Msa0806260:five_prime_UTR
ACTGAAAATGATATGCCATC+TGG 0.457124 5_3:+24236741 Msa0806260:five_prime_UTR
GCCATCTGGGAGCATCCCTC+TGG 0.463909 5_3:+24236755 Msa0806260:five_prime_UTR
TGTTCAGCATTGTTCCCCTT+CGG 0.468250 5_3:-24232436 None:intergenic
AGTAAATATTCCGTCAGAAA+AGG 0.469439 5_3:+24232556 Msa0806260:five_prime_UTR
TTTAACTGAAGCTGAAGAAC+AGG 0.471336 5_3:-24237531 None:intergenic
ATAAGCGAAGAAGGGGAAGA+TGG 0.472328 5_3:-24231252 None:intergenic
GTCCATGTGAATCTCCCAAT+TGG 0.481266 5_3:-24232216 None:intergenic
CAGTTGAAGATCCGCCAATT+GGG 0.486788 5_3:+24232202 Msa0806260:five_prime_UTR
TCACATTCCTTATTTCAGAA+AGG 0.489887 5_3:+24236621 Msa0806260:five_prime_UTR
TCATGTAACAAGTAGCTCCT+TGG 0.493061 5_3:-24236576 None:intergenic
TAAGCGAAGAAGGGGAAGAT+GGG 0.495142 5_3:-24231251 None:intergenic
GCATTACCTTCCATAGGTTG+AGG 0.497016 5_3:-24231683 None:intergenic
TGTTGAAGGTCCTCAACCTA+TGG 0.497121 5_3:+24231673 Msa0806260:five_prime_UTR
TATCTTACATGTGGCGATGT+AGG 0.501672 5_3:+24238467 Msa0806260:three_prime_UTR
AGTTGCGTTTACTACGGAAA+AGG 0.504159 5_3:-24231200 None:intergenic
TGCGCGAGACACTATGGTAA+AGG 0.504586 5_3:+24237572 Msa0806260:CDS
GCCTTCAAACAACTTCTGTA+TGG 0.514735 5_3:-24237080 None:intergenic
CAGGTTCGATGCCTTATGGT+TGG 0.516574 5_3:+24232488 Msa0806260:five_prime_UTR
AGCATCAGTTGCGTTTACTA+CGG 0.521612 5_3:-24231206 None:intergenic
ATGAAGCGAGCGAAGAAACT+GGG 0.526969 5_3:-24231353 None:intergenic
TATATATTAGTTAAGATGGA+TGG 0.538285 5_3:+24238736 Msa0806260:three_prime_UTR
GCAACCTTTATACACTTCAC+AGG 0.539923 5_3:+24237990 Msa0806260:CDS
ACCATACAGAAGTTGTTTGA+AGG 0.540530 5_3:+24237079 Msa0806260:CDS
AATTCTGAAGACATAAATAA+GGG 0.540626 5_3:+24243111 Msa0806260:three_prime_UTR
GCAAATCTAGTCCAACCATA+AGG 0.541036 5_3:-24232499 None:intergenic
CTTACAATTAGATCTTGATA+GGG 0.543468 5_3:+24237925 Msa0806260:CDS
CTGAAAATGATATGCCATCT+GGG 0.544979 5_3:+24236742 Msa0806260:five_prime_UTR
GGGGTTTGCGAATGATGAAA+GGG 0.545894 5_3:-24231333 None:intergenic
CATGATATCGGAAGCTGCAG+TGG 0.546090 5_3:+24238190 Msa0806260:three_prime_UTR
CTATCAAGATCTAATTGTAA+GGG 0.549176 5_3:-24237923 None:intergenic
TCGCCACATGTAAGATAGAC+AGG 0.550072 5_3:-24238461 None:intergenic
AACAAACTCTGTAATGCCAG+AGG 0.550134 5_3:-24236771 None:intergenic
TGGGGTTTGCGAATGATGAA+AGG 0.558121 5_3:-24231334 None:intergenic
GTGGAAGTAGAACAGCTTGA+GGG 0.565647 5_3:+24237313 Msa0806260:CDS
GATCTTCAGCTTGATGTCAA+AGG 0.567722 5_3:+24237256 Msa0806260:intron
CACATTGCATTACCTTCCAT+AGG 0.574604 5_3:-24231689 None:intergenic
AACTGAAGCTGAAGAACAGG+TGG 0.576147 5_3:-24237528 None:intergenic
TTTCAGGGAACTGTTGTGGA+AGG 0.577078 5_3:+24237055 Msa0806260:intron
CGCCAATTGGGAGATTCACA+TGG 0.581165 5_3:+24232214 Msa0806260:five_prime_UTR
AATGCGCGTGAGAGTGATTG+GGG 0.581175 5_3:+24236394 Msa0806260:five_prime_UTR
TTTCAGAACAAATTAAGATG+GGG 0.584112 5_3:-24238697 None:intergenic
TCCACAACATAGCCTCTACT+AGG 0.596783 5_3:-24236454 None:intergenic
TTTCCCGATATAAACAGAAG+TGG 0.597045 5_3:-24238622 None:intergenic
GCGGATACTGATCTTTCCGA+AGG 0.601985 5_3:+24232420 Msa0806260:five_prime_UTR
CACAAGTACAGTGGATGCTG+TGG 0.605419 5_3:+24232179 Msa0806260:five_prime_UTR
AAAGCTAGAAGACAAAATGA+AGG 0.607281 5_3:+24236917 Msa0806260:exon
CGGATACTGATCTTTCCGAA+GGG 0.607412 5_3:+24232421 Msa0806260:five_prime_UTR
CATGTGAATCTCCCAATTGG+CGG 0.608755 5_3:-24232213 None:intergenic
TGTGGAAGTAGAACAGCTTG+AGG 0.609687 5_3:+24237312 Msa0806260:CDS
TACCTCTAACGGAGGAGTGG+TGG 0.610470 5_3:-24231400 None:intergenic
TATCAAGATCTAATTGTAAG+GGG 0.610556 5_3:-24237922 None:intergenic
GCCAGAGGGATGCTCCCAGA+TGG 0.612314 5_3:-24236756 None:intergenic
GGATCATACAATTCAGCAAG+AGG 0.617299 5_3:-24236433 None:intergenic
ACGCGATTGATTACCTCTAA+CGG 0.618741 5_3:-24231411 None:intergenic
AGTATATGCATCAGAAACAC+AGG 0.622310 5_3:-24243200 None:intergenic
ACAAACTCTGTAATGCCAGA+GGG 0.625922 5_3:-24236770 None:intergenic
TCCTAGTAGAGGCTATGTTG+TGG 0.625984 5_3:+24236453 Msa0806260:five_prime_UTR
GAAGGTCCTCAACCTATGGA+AGG 0.631259 5_3:+24231677 Msa0806260:five_prime_UTR
TCTAGCGGTGCGGATGCAAG+TGG 0.635527 5_3:-24238133 None:intergenic
TGCACAGTTCAGCTTAACTG+TGG 0.636127 5_3:+24232519 Msa0806260:five_prime_UTR
AGGAGTGGTGGTGATAGTCA+TGG 0.638641 5_3:-24231388 None:intergenic
TGTAGGCTTTGAAGAGACGT+TGG 0.640799 5_3:+24238484 Msa0806260:three_prime_UTR
GAATTGTATGATCCTAGTAG+AGG 0.640831 5_3:+24236442 Msa0806260:five_prime_UTR
GATTACCTCTAACGGAGGAG+TGG 0.641206 5_3:-24231403 None:intergenic
GTAGCAACAGAATCTTGAAG+TGG 0.641625 5_3:+24231613 Msa0806260:intron
CTATATTGAATGCATGAATG+TGG 0.644705 5_3:+24237114 Msa0806260:CDS
ATTCAATATAGTTCATATGG+TGG 0.646922 5_3:-24237102 None:intergenic
GGAGATTGATGCTCTTGCAG+AGG 0.647925 5_3:+24238211 Msa0806260:three_prime_UTR
AGCAGAAAACACAAGTACAG+TGG 0.653432 5_3:+24232170 Msa0806260:five_prime_UTR
CGATTGATTACCTCTAACGG+AGG 0.662494 5_3:-24231408 None:intergenic
ATACCTGTCTATCTTACATG+TGG 0.666277 5_3:+24238458 Msa0806260:three_prime_UTR
CACTGATGCATCTAGCGGTG+CGG 0.684294 5_3:-24238143 None:intergenic
GCCACCAATAGTGAAAACAT+CGG 0.685681 5_3:-24232277 None:intergenic
TGAAGCGAGCGAAGAAACTG+GGG 0.693799 5_3:-24231352 None:intergenic
ATTGTAAGGGGAACTCATAG+CGG 0.696550 5_3:-24237910 None:intergenic
AAATCAAAAGAAGAGAACAA+TGG 0.698409 5_3:-24243250 None:intergenic
CTTGACACTGATGCATCTAG+CGG 0.700615 5_3:-24238148 None:intergenic
GGATACTGATCTTTCCGAAG+GGG 0.700894 5_3:+24232422 Msa0806260:five_prime_UTR
TGATGTCTAAGAACTTAACA+GGG 0.721619 5_3:+24236884 Msa0806260:five_prime_UTR
GGAAGACAGATGCATACTTG+AGG 0.749512 5_3:+24236474 Msa0806260:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAAAAAAAATAATA+AGG + chr5_3:24238058-24238077 Msa0806260:intron 0.0%
!! TAAATATTGAATATTATACA+TGG - chr5_3:24232341-24232360 None:intergenic 10.0%
!! ATTTATATTCAAAACTATTA+AGG + chr5_3:24232956-24232975 Msa0806260:intron 10.0%
!!! TTTTAGTATTAAATTTTTTG+TGG + chr5_3:24234326-24234345 Msa0806260:intron 10.0%
!!! ACATTTAAAATAAAATTGTT+TGG - chr5_3:24234795-24234814 None:intergenic 10.0%
!! TTAATAATACAATTTATTTC+TGG + chr5_3:24235934-24235953 Msa0806260:intron 10.0%
!!! GTTAAAATAAAAAGTATAAA+TGG - chr5_3:24237652-24237671 None:intergenic 10.0%
!!! TATTAAACTAAAATCATTTT+CGG - chr5_3:24240403-24240422 None:intergenic 10.0%
!!! TATTAAACTAAAATCATTTT+CGG - chr5_3:24240403-24240422 None:intergenic 10.0%
!!! AGTGTCAATTTAATTTTTTT+AGG + chr5_3:24232071-24232090 Msa0806260:intron 15.0%
!!! GTGTCAATTTAATTTTTTTA+GGG + chr5_3:24232072-24232091 Msa0806260:intron 15.0%
!! TGTAAAAATTAAGAAATGAA+GGG + chr5_3:24232706-24232725 Msa0806260:intron 15.0%
!!! CTTTTGAAATTGATTTATTA+TGG + chr5_3:24232783-24232802 Msa0806260:intron 15.0%
!!! GTTTTGAATATAAATTTTCT+TGG - chr5_3:24232951-24232970 None:intergenic 15.0%
!! AAGAAATAAATCATACAATA+AGG + chr5_3:24233468-24233487 Msa0806260:intron 15.0%
!! TGTATGAACTAAATAAAAAT+TGG + chr5_3:24233573-24233592 Msa0806260:intron 15.0%
!! GTATGAACTAAATAAAAATT+GGG + chr5_3:24233574-24233593 Msa0806260:intron 15.0%
!!! CAATAATAAATATCCATTTT+GGG + chr5_3:24237676-24237695 Msa0806260:intron 15.0%
!!! CTTTGTTGATTTTAAATATA+AGG + chr5_3:24238027-24238046 Msa0806260:intron 15.0%
!! ATCTTATATATTAGTTAAGA+TGG + chr5_3:24238732-24238751 Msa0806260:three_prime_UTR 15.0%
!! ATACAGTAAAATGAAATTAT+TGG + chr5_3:24239080-24239099 Msa0806260:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24239417-24239436 Msa0806260:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24239417-24239436 Msa0806260:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24239417-24239436 Msa0806260:intron 15.0%
!!! TACAAAATTTAAAACCAAAT+AGG - chr5_3:24239874-24239893 None:intergenic 15.0%
!! TACAAGTTTGATAAATATAA+AGG + chr5_3:24239950-24239969 Msa0806260:intron 15.0%
!!! AACCTATTTTGTTTTAAATT+TGG + chr5_3:24240162-24240181 Msa0806260:intron 15.0%
!!! TACCAAATTTAAAACAAAAT+AGG - chr5_3:24240167-24240186 None:intergenic 15.0%
!! TTGATTAGAAATTTGAAAAA+TGG + chr5_3:24240582-24240601 Msa0806260:intron 15.0%
!! TGATTAGAAATTTGAAAAAT+GGG + chr5_3:24240583-24240602 Msa0806260:intron 15.0%
!! AATATGATATATGAAACTAT+TGG + chr5_3:24239416-24239435 Msa0806260:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24239417-24239436 Msa0806260:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24239417-24239436 Msa0806260:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24239417-24239436 Msa0806260:intron 15.0%
!!! TACAAAATTTAAAACCAAAT+AGG - chr5_3:24239874-24239893 None:intergenic 15.0%
!! TACAAGTTTGATAAATATAA+AGG + chr5_3:24239950-24239969 Msa0806260:intron 15.0%
!!! TACCAAATTTAAAACAAAAT+AGG - chr5_3:24240167-24240186 None:intergenic 15.0%
!! TTGATTAGAAATTTGAAAAA+TGG + chr5_3:24240582-24240601 Msa0806260:intron 15.0%
!! TGATTAGAAATTTGAAAAAT+GGG + chr5_3:24240583-24240602 Msa0806260:intron 15.0%
!!! GAATTTTTGTGATTTTTTTG+TGG + chr5_3:24231580-24231599 Msa0806260:intron 20.0%
!!! TTTCTTTTGAATTCATGTTA+TGG + chr5_3:24231793-24231812 Msa0806260:intron 20.0%
!!! TTTTGTTATTGGAAATGTTA+GGG + chr5_3:24231816-24231835 Msa0806260:intron 20.0%
!!! ATTCTTTTGAATTCTTGTTA+TGG + chr5_3:24231919-24231938 Msa0806260:intron 20.0%
!! TTGATTATGTTGTATTTAAG+TGG + chr5_3:24232617-24232636 Msa0806260:intron 20.0%
!! GTGTAAAAATTAAGAAATGA+AGG + chr5_3:24232705-24232724 Msa0806260:intron 20.0%
!! TTATGTTATGTTGAAATACT+AGG + chr5_3:24232813-24232832 Msa0806260:intron 20.0%
!! AGATCATCAAAAATCTTATT+TGG + chr5_3:24233176-24233195 Msa0806260:intron 20.0%
!!! TATTTATTTAAACCGTTTTG+CGG - chr5_3:24233215-24233234 None:intergenic 20.0%
!! AGAGAAAAAAGAAAAAATAG+AGG + chr5_3:24233499-24233518 Msa0806260:intron 20.0%
!!! CATAAAAAGTACATTAAGAT+TGG + chr5_3:24233603-24233622 Msa0806260:intron 20.0%
!!! AGGAATTATCAATTTTTTAG+CGG - chr5_3:24233633-24233652 None:intergenic 20.0%
!!! AAAAGGTTTTAAGTGAATAT+CGG - chr5_3:24234106-24234125 None:intergenic 20.0%
!! TAAATTCCTATACAATATAG+CGG + chr5_3:24234426-24234445 Msa0806260:intron 20.0%
!! ATTGGATATTTAATAACACT+CGG + chr5_3:24234463-24234482 Msa0806260:intron 20.0%
!! AATATATAAGAGAAAAAGCA+AGG - chr5_3:24234533-24234552 None:intergenic 20.0%
!!! GCTTTTTCTCTTATATATTA+CGG + chr5_3:24234534-24234553 Msa0806260:intron 20.0%
!! TTTAGATTGATCATTGTAAT+TGG + chr5_3:24234945-24234964 Msa0806260:intron 20.0%
!!! AAAAATACATAGAGTTTTAG+CGG + chr5_3:24235351-24235370 Msa0806260:intron 20.0%
!!! TTTAATTTTTTTCCGAAAGA+AGG + chr5_3:24236666-24236685 Msa0806260:intron 20.0%
!! ATGTTTAATATTGTTTGTTC+AGG + chr5_3:24236698-24236717 Msa0806260:intron 20.0%
!!! ACAAGAAAAGAATCATTTTA+TGG + chr5_3:24237148-24237167 Msa0806260:CDS 20.0%
!!! ATTTTATGGTAGGTATTTTT+TGG + chr5_3:24237162-24237181 Msa0806260:intron 20.0%
!! TGAAATAATTGAAATTCAGA+AGG - chr5_3:24237231-24237250 None:intergenic 20.0%
!! AAATATGAAGGAAAAATAGT+AGG - chr5_3:24237430-24237449 None:intergenic 20.0%
!!! TTTTCCTTCATATTTTAGAT+TGG + chr5_3:24237435-24237454 Msa0806260:intron 20.0%
!!! ATAACCAATCTAAAATATGA+AGG - chr5_3:24237442-24237461 None:intergenic 20.0%
!! CCAAAATGGATATTTATTAT+TGG - chr5_3:24237678-24237697 None:intergenic 20.0%
!!! CCAATAATAAATATCCATTT+TGG + chr5_3:24237675-24237694 Msa0806260:intron 20.0%
!! TTAATTCAGTGATTCATAAA+AGG - chr5_3:24238417-24238436 None:intergenic 20.0%
!! TGTATCATTTCAATATTCTT+TGG - chr5_3:24238655-24238674 None:intergenic 20.0%
!!! TTTTCAGAACAAATTAAGAT+GGG - chr5_3:24238701-24238720 None:intergenic 20.0%
!! TATATATTAGTTAAGATGGA+TGG + chr5_3:24238736-24238755 Msa0806260:three_prime_UTR 20.0%
!!! AATTCTGAAGACATAAATAA+GGG + chr5_3:24238855-24238874 Msa0806260:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24239407-24239426 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24239408-24239427 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24239429-24239448 Msa0806260:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24239407-24239426 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24239408-24239427 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24239429-24239448 Msa0806260:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24239407-24239426 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24239408-24239427 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24239429-24239448 Msa0806260:intron 20.0%
!! AACATAATATTGAACCTATT+TGG + chr5_3:24239857-24239876 Msa0806260:intron 20.0%
!! TAGAAGTTTGATAAATATGA+AGG + chr5_3:24240094-24240113 Msa0806260:intron 20.0%
!! TACAAAAATGATAAATGAGA+AGG + chr5_3:24240269-24240288 Msa0806260:intron 20.0%
!!! GAAGGTTTTAAAAGATAAAT+TGG + chr5_3:24240496-24240515 Msa0806260:intron 20.0%
!! ATAGTCTAAATTCAGTAAAT+TGG + chr5_3:24240658-24240677 Msa0806260:intron 20.0%
!! TTTATCAAACTTCAAAACAA+TGG - chr5_3:24240708-24240727 None:intergenic 20.0%
!! TGATACGAAAATTGATATTT+AGG + chr5_3:24240747-24240766 Msa0806260:intron 20.0%
!!! AATTCTGAAGACATAAATAA+GGG + chr5_3:24238855-24238874 Msa0806260:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24239407-24239426 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24239408-24239427 None:intergenic 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24239407-24239426 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24239408-24239427 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24239429-24239448 Msa0806260:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24239407-24239426 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24239408-24239427 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24239429-24239448 Msa0806260:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24239407-24239426 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24239408-24239427 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24239429-24239448 Msa0806260:intron 20.0%
!! AACATAATATTGAACCTATT+TGG + chr5_3:24239857-24239876 Msa0806260:intron 20.0%
!! TAGAAGTTTGATAAATATGA+AGG + chr5_3:24240094-24240113 Msa0806260:intron 20.0%
!!! GACCTATTTTGTTTTAAATT+TGG + chr5_3:24242406-24242425 Msa0806260:intron 20.0%
!! TACAAAAATGATAAATGAGA+AGG + chr5_3:24240269-24240288 Msa0806260:intron 20.0%
!!! GAAGGTTTTAAAAGATAAAT+TGG + chr5_3:24240496-24240515 Msa0806260:intron 20.0%
!! ATAGTCTAAATTCAGTAAAT+TGG + chr5_3:24240658-24240677 Msa0806260:intron 20.0%
!! TTTATCAAACTTCAAAACAA+TGG - chr5_3:24240708-24240727 None:intergenic 20.0%
!! TGATACGAAAATTGATATTT+AGG + chr5_3:24240747-24240766 Msa0806260:intron 20.0%
!!! AATTCTGAAGACATAAATAA+GGG + chr5_3:24238855-24238874 Msa0806260:intron 20.0%
!!! TTTGTTTGATGATGATTACT+AGG + chr5_3:24231538-24231557 Msa0806260:intron 25.0%
!!! TTGTTTGATGATGATTACTA+GGG + chr5_3:24231539-24231558 Msa0806260:intron 25.0%
!!! TTTTTGGAGAAGAAGTTTAT+TGG + chr5_3:24231720-24231739 Msa0806260:intron 25.0%
!!! TCATGTTATGGTTTTGTTAT+TGG + chr5_3:24231805-24231824 Msa0806260:intron 25.0%
!!! GTTTTGTTATTGGAAATGTT+AGG + chr5_3:24231815-24231834 Msa0806260:intron 25.0%
!!! TTTGTTATTGGAAATGTTAG+GGG + chr5_3:24231817-24231836 Msa0806260:intron 25.0%
!!! TCTTGTTATGGTTTTGTTAT+TGG + chr5_3:24231931-24231950 Msa0806260:intron 25.0%
!! ATTTTTGTCCTTTTCGTATT+TGG + chr5_3:24232137-24232156 Msa0806260:intron 25.0%
! TCAATATTTATGCGTATCAT+AGG + chr5_3:24232351-24232370 Msa0806260:intron 25.0%
! CAATATTTATGCGTATCATA+GGG + chr5_3:24232352-24232371 Msa0806260:intron 25.0%
! AATATTTATGCGTATCATAG+GGG + chr5_3:24232353-24232372 Msa0806260:intron 25.0%
!!! TTATATTGATTTAAACGTGC+AGG + chr5_3:24232398-24232417 Msa0806260:intron 25.0%
! AAATGTTTGAGAACCTTAAT+AGG + chr5_3:24232677-24232696 Msa0806260:intron 25.0%
! TCTATATATATTGCTTTGAC+TGG + chr5_3:24232753-24232772 Msa0806260:intron 25.0%
! TTTCAACATAACATAACCTA+GGG - chr5_3:24232809-24232828 None:intergenic 25.0%
! ATTTCAACATAACATAACCT+AGG - chr5_3:24232810-24232829 None:intergenic 25.0%
! GATAACATTAGAGTAAGTTA+AGG + chr5_3:24232854-24232873 Msa0806260:intron 25.0%
!! AAATCTTATTTGGCAAATAG+TGG + chr5_3:24233186-24233205 Msa0806260:intron 25.0%
! TAGTTCATACAATTTCTCAT+CGG - chr5_3:24233564-24233583 None:intergenic 25.0%
! GTATCATAGCTTATCAATTT+GGG - chr5_3:24233914-24233933 None:intergenic 25.0%
!!! TCACTTAAAACCTTTTTTCA+TGG + chr5_3:24234110-24234129 Msa0806260:intron 25.0%
! AGATTGTTTGTTTAATAGCA+TGG + chr5_3:24234301-24234320 Msa0806260:intron 25.0%
! TTGGATATTTAATAACACTC+GGG + chr5_3:24234464-24234483 Msa0806260:intron 25.0%
! ATACTTCAATCACACTTAAT+TGG - chr5_3:24234629-24234648 None:intergenic 25.0%
!! TAAAAATACTAGGGACTTTT+GGG - chr5_3:24234717-24234736 None:intergenic 25.0%
!! ATTTTATGTGTGAATGTGTA+TGG - chr5_3:24234752-24234771 None:intergenic 25.0%
! ATGGAATAGAAATATCACTA+GGG - chr5_3:24235012-24235031 None:intergenic 25.0%
! AATGGAATAGAAATATCACT+AGG - chr5_3:24235013-24235032 None:intergenic 25.0%
!! ACTCAAATTTAAGATGACAA+AGG + chr5_3:24235037-24235056 Msa0806260:intron 25.0%
! TGCAAATAATTAGTGTGTTT+AGG - chr5_3:24235208-24235227 None:intergenic 25.0%
!! CATTCAGAATAATCTTTTGT+TGG + chr5_3:24235813-24235832 Msa0806260:intron 25.0%
! GAAGATAACATTTCTAATGT+CGG - chr5_3:24235894-24235913 None:intergenic 25.0%
! TCTTGAAAAGTGAACATTTA+TGG - chr5_3:24236087-24236106 None:intergenic 25.0%
!! AAAGAGTTAACCAAATCTTT+TGG + chr5_3:24236831-24236850 Msa0806260:five_prime_UTR 25.0%
!!! TGAAGGTAAAGGTTTTTTAA+TGG + chr5_3:24236934-24236953 Msa0806260:intron 25.0%
!!! GTTTCTCATAGTTATTTTGT+AGG + chr5_3:24236959-24236978 Msa0806260:intron 25.0%
! ATTCAATATAGTTCATATGG+TGG - chr5_3:24237105-24237124 None:intergenic 25.0%
! TGCATTCAATATAGTTCATA+TGG - chr5_3:24237108-24237127 None:intergenic 25.0%
!! GAAAAGAATCATTTTATGGT+AGG + chr5_3:24237152-24237171 Msa0806260:intron 25.0%
!!! TAACCATGTATTTTAGCTTT+TGG + chr5_3:24237383-24237402 Msa0806260:intron 25.0%
!! ATGATTGTGATTTCATTTTC+AGG + chr5_3:24237473-24237492 Msa0806260:intron 25.0%
! ACAAGAATATAGAAAGTGAA+GGG - chr5_3:24237627-24237646 None:intergenic 25.0%
! TACAAGAATATAGAAAGTGA+AGG - chr5_3:24237628-24237647 None:intergenic 25.0%
! AAATATTTAAACACCAGAGT+AGG - chr5_3:24237751-24237770 None:intergenic 25.0%
!!! TTTGATGATTATTTTGCCAT+TGG + chr5_3:24237785-24237804 Msa0806260:intron 25.0%
! TATCAAGATCTAATTGTAAG+GGG - chr5_3:24237925-24237944 None:intergenic 25.0%
! CTATCAAGATCTAATTGTAA+GGG - chr5_3:24237926-24237945 None:intergenic 25.0%
! CTTACAATTAGATCTTGATA+GGG + chr5_3:24237925-24237944 Msa0806260:CDS 25.0%
!!! TCTTCTTGAAATGTGTTTTT+TGG + chr5_3:24238382-24238401 Msa0806260:intron 25.0%
! GATGAATGCAAAATATTAGA+TGG - chr5_3:24238567-24238586 None:intergenic 25.0%
! TTTCAGAACAAATTAAGATG+GGG - chr5_3:24238700-24238719 None:intergenic 25.0%
!! CTTTTCAGAACAAATTAAGA+TGG - chr5_3:24238702-24238721 None:intergenic 25.0%
! CCAATAGAAATATGTACATA+TGG - chr5_3:24238824-24238843 None:intergenic 25.0%
!! CCATATGTACATATTTCTAT+TGG + chr5_3:24238821-24238840 Msa0806260:intron 25.0%
!! GAATTCTGAAGACATAAATA+AGG + chr5_3:24238854-24238873 Msa0806260:intron 25.0%
! AGACATAAATAAGGGTAATA+TGG + chr5_3:24238863-24238882 Msa0806260:intron 25.0%
! AAATCAAAAGAAGAGAACAA+TGG - chr5_3:24238997-24239016 None:intergenic 25.0%
! TACTGTATACAAAACCAAAT+AGG - chr5_3:24239068-24239087 None:intergenic 25.0%
!!! GGTAAAATGAAAGTATTAGA+AGG + chr5_3:24239233-24239252 Msa0806260:intron 25.0%
!! TTGCTATTCATCAAACTTAT+AGG - chr5_3:24239294-24239313 None:intergenic 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24239350-24239369 Msa0806260:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24239350-24239369 Msa0806260:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24239350-24239369 Msa0806260:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24239650-24239669 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr5_3:24239651-24239670 Msa0806260:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24239350-24239369 Msa0806260:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24239650-24239669 None:intergenic 25.0%
! TAGAAGTTTGATAAACATGA+AGG + chr5_3:24239802-24239821 Msa0806260:intron 25.0%
! AATATTATGTTACGCATCAA+AGG - chr5_3:24239848-24239867 None:intergenic 25.0%
!! AACCTATTTGGTTTCATATT+CGG + chr5_3:24240013-24240032 Msa0806260:intron 25.0%
!! ATTCGGTAAAATGAAAGTAT+TGG + chr5_3:24239229-24239248 Msa0806260:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24239650-24239669 None:intergenic 25.0%
! AATATCATGTTTCGCATAAA+GGG - chr5_3:24240140-24240159 None:intergenic 25.0%
! AAATATCATGTTTCGCATAA+AGG - chr5_3:24240141-24240160 None:intergenic 25.0%
!!! AAATGAGGTTTTAGCATTTA+TGG + chr5_3:24240245-24240264 Msa0806260:intron 25.0%
!!! GTTTTGAAGTTTGATAAAGA+AGG + chr5_3:24240710-24240729 Msa0806260:intron 25.0%
!!! TTGATATTTAGGACTAGTTA+TGG + chr5_3:24240758-24240777 Msa0806260:intron 25.0%
! CCAATAGAAATATGTACATA+TGG - chr5_3:24238824-24238843 None:intergenic 25.0%
!! CCATATGTACATATTTCTAT+TGG + chr5_3:24238821-24238840 Msa0806260:intron 25.0%
!! GAATTCTGAAGACATAAATA+AGG + chr5_3:24238854-24238873 Msa0806260:intron 25.0%
! AGACATAAATAAGGGTAATA+TGG + chr5_3:24238863-24238882 Msa0806260:intron 25.0%
! AAATCAAAAGAAGAGAACAA+TGG - chr5_3:24238997-24239016 None:intergenic 25.0%
! AAATCAAAAGAAGAGAACAA+TGG - chr5_3:24238997-24239016 None:intergenic 25.0%
!! TGTTCACATATCATGTTTTA+TGG - chr5_3:24241153-24241172 None:intergenic 25.0%
! ACATGATATGTGAACATATT+TGG + chr5_3:24241157-24241176 Msa0806260:intron 25.0%
!! TTGCTATTCATCAAACTTAT+AGG - chr5_3:24239294-24239313 None:intergenic 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24239350-24239369 Msa0806260:intron 25.0%
!!! GAAACTATTGGTTTTGTATT+CGG + chr5_3:24241534-24241553 Msa0806260:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24239350-24239369 Msa0806260:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24239650-24239669 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr5_3:24239651-24239670 Msa0806260:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24239350-24239369 Msa0806260:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24239650-24239669 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr5_3:24239651-24239670 Msa0806260:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24239350-24239369 Msa0806260:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24239650-24239669 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr5_3:24239651-24239670 Msa0806260:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24239350-24239369 Msa0806260:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24239650-24239669 None:intergenic 25.0%
! TAGAAGTTTGATAAACATGA+AGG + chr5_3:24239802-24239821 Msa0806260:intron 25.0%
! AATATTATGTTACGCATCAA+AGG - chr5_3:24239848-24239867 None:intergenic 25.0%
!! AACCTATTTGGTTTCATATT+CGG + chr5_3:24240013-24240032 Msa0806260:intron 25.0%
!! ATTCGGTAAAATGAAAGTAT+TGG + chr5_3:24239229-24239248 Msa0806260:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24239650-24239669 None:intergenic 25.0%
! AATATCATGTTTCGCATAAA+GGG - chr5_3:24240140-24240159 None:intergenic 25.0%
! AAATATCATGTTTCGCATAA+AGG - chr5_3:24240141-24240160 None:intergenic 25.0%
! TTTATGCGAAACATGATATT+TGG + chr5_3:24240140-24240159 Msa0806260:intron 25.0%
!!! AAATGAGGTTTTAGCATTTA+TGG + chr5_3:24240245-24240264 Msa0806260:intron 25.0%
! AAAATCATATTTCGCATCAA+GGG - chr5_3:24242559-24242578 None:intergenic 25.0%
! AAAAATCATATTTCGCATCA+AGG - chr5_3:24242560-24242579 None:intergenic 25.0%
!!! ATTTTTAAGCTGAGTTTGTT+TGG + chr5_3:24242574-24242593 Msa0806260:intron 25.0%
!!! GTTTTGAAGTTTGATAAAGA+AGG + chr5_3:24240710-24240729 Msa0806260:intron 25.0%
!!! TTGATATTTAGGACTAGTTA+TGG + chr5_3:24240758-24240777 Msa0806260:intron 25.0%
! CCAATAGAAATATGTACATA+TGG - chr5_3:24238824-24238843 None:intergenic 25.0%
!! CCATATGTACATATTTCTAT+TGG + chr5_3:24238821-24238840 Msa0806260:intron 25.0%
!! GAATTCTGAAGACATAAATA+AGG + chr5_3:24238854-24238873 Msa0806260:intron 25.0%
! AGACATAAATAAGGGTAATA+TGG + chr5_3:24238863-24238882 Msa0806260:intron 25.0%
! AAATCAAAAGAAGAGAACAA+TGG - chr5_3:24238997-24239016 None:intergenic 25.0%
TGTGAATAATAAGCGAAGAA+GGG - chr5_3:24231263-24231282 None:intergenic 30.0%
ATGTGAATAATAAGCGAAGA+AGG - chr5_3:24231264-24231283 None:intergenic 30.0%
! TTACTAGGGTTTAAGATATC+TGG + chr5_3:24231553-24231572 Msa0806260:intron 30.0%
!!! GCAATGTGATGGTTATTTTT+TGG + chr5_3:24231704-24231723 Msa0806260:intron 30.0%
!! GGTGTCAACTTAATTTGTAA+CGG + chr5_3:24231860-24231879 Msa0806260:intron 30.0%
AAGGACAAAAATCAAACTAG+CGG - chr5_3:24232129-24232148 None:intergenic 30.0%
AACTACTACCAAATACGAAA+AGG - chr5_3:24232148-24232167 None:intergenic 30.0%
ACATCGGAATAATGTTTCTT+CGG - chr5_3:24232264-24232283 None:intergenic 30.0%
! TATTCCGATGTTTTCACTAT+TGG + chr5_3:24232273-24232292 Msa0806260:five_prime_UTR 30.0%
TATATAGATGTTACAGATGC+AGG + chr5_3:24232469-24232488 Msa0806260:five_prime_UTR 30.0%
AGTAAATATTCCGTCAGAAA+AGG + chr5_3:24232556-24232575 Msa0806260:five_prime_UTR 30.0%
! AGAAGAATAACCTTTTCTGA+CGG - chr5_3:24232569-24232588 None:intergenic 30.0%
! TTTTACACGAACTCCTATTA+AGG - chr5_3:24232693-24232712 None:intergenic 30.0%
ATTAAGAAATGAAGGGCAAT+AGG + chr5_3:24232713-24232732 Msa0806260:intron 30.0%
TTAAGAAATGAAGGGCAATA+GGG + chr5_3:24232714-24232733 Msa0806260:intron 30.0%
! AATTGATTTATTATGGCCCT+AGG + chr5_3:24232790-24232809 Msa0806260:intron 30.0%
TAGTTAAGGGATTAATCAGA+TGG + chr5_3:24232893-24232912 Msa0806260:intron 30.0%
CCAAACATGGAACTAATAAT+AGG - chr5_3:24232991-24233010 None:intergenic 30.0%
CCTATTATTAGTTCCATGTT+TGG + chr5_3:24232988-24233007 Msa0806260:intron 30.0%
TCAATTCTACCTTAAAGCTA+AGG + chr5_3:24233131-24233150 Msa0806260:intron 30.0%
CAATTCTACCTTAAAGCTAA+GGG + chr5_3:24233132-24233151 Msa0806260:intron 30.0%
TGATCTGATATAAGTAACAC+TGG - chr5_3:24233162-24233181 None:intergenic 30.0%
CTTCGATATTTCCAAAATAG+CGG - chr5_3:24233692-24233711 None:intergenic 30.0%
TCGAAGTTGCTAAATCATAT+CGG + chr5_3:24233706-24233725 Msa0806260:intron 30.0%
ATAACTCATCCTTACAAAAC+AGG + chr5_3:24233756-24233775 Msa0806260:intron 30.0%
! CTCTTTTCACAAATTCTCAT+CGG + chr5_3:24233800-24233819 Msa0806260:intron 30.0%
GGTATCATAGCTTATCAATT+TGG - chr5_3:24233915-24233934 None:intergenic 30.0%
!! ACGATTTTGACCATGAAAAA+AGG - chr5_3:24234123-24234142 None:intergenic 30.0%
! CTAAAAATACTAGGGACTTT+TGG - chr5_3:24234718-24234737 None:intergenic 30.0%
CTTGGAAGCTAAAAATACTA+GGG - chr5_3:24234726-24234745 None:intergenic 30.0%
ACTTGGAAGCTAAAAATACT+AGG - chr5_3:24234727-24234746 None:intergenic 30.0%
GAACGTAAAGTGATTATGTT+TGG - chr5_3:24234820-24234839 None:intergenic 30.0%
TAAAGTTAGGATGTTGTTGT+AGG + chr5_3:24234906-24234925 Msa0806260:intron 30.0%
GATGTTGTTGTAGGTTATTT+GGG + chr5_3:24234915-24234934 Msa0806260:intron 30.0%
GATTGATCATTGTAATTGGA+AGG + chr5_3:24234949-24234968 Msa0806260:intron 30.0%
TGGAATAGAAATATCACTAG+GGG - chr5_3:24235011-24235030 None:intergenic 30.0%
TCTTAAATTTGAGTGCGAAA+TGG - chr5_3:24235031-24235050 None:intergenic 30.0%
TGTGTTTGCATCAAAAAAGA+GGG - chr5_3:24235178-24235197 None:intergenic 30.0%
TTGTGTTTGCATCAAAAAAG+AGG - chr5_3:24235179-24235198 None:intergenic 30.0%
! TTTTCAAATTGCATGAACAC+TGG + chr5_3:24235289-24235308 Msa0806260:intron 30.0%
!! TGACCAATTACTTTTCTTGA+AGG + chr5_3:24235444-24235463 Msa0806260:intron 30.0%
!! AGGATATTGGTTTACAATTG+AGG + chr5_3:24235489-24235508 Msa0806260:intron 30.0%
TTACAATTGAGGTTATTCCA+TGG + chr5_3:24235500-24235519 Msa0806260:intron 30.0%
!!! TTTTTTTTATCACAGCCTTG+AGG + chr5_3:24235635-24235654 Msa0806260:intron 30.0%
!!! TTTTTTTATCACAGCCTTGA+GGG + chr5_3:24235636-24235655 Msa0806260:intron 30.0%
TAGTGTTAGATATCCAGTTT+GGG + chr5_3:24235683-24235702 Msa0806260:intron 30.0%
! TATAACATAGTTCTGTTGTG+TGG + chr5_3:24236002-24236021 Msa0806260:intron 30.0%
! TTATGGATTGTTGAGAGAAA+AGG - chr5_3:24236070-24236089 None:intergenic 30.0%
AGAACAGAAATACAAGGAAA+TGG - chr5_3:24236154-24236173 None:intergenic 30.0%
AAAGACAGAACAGAAATACA+AGG - chr5_3:24236160-24236179 None:intergenic 30.0%
CTGAATTTCTCTGTTTGATA+AGG + chr5_3:24236204-24236223 Msa0806260:intron 30.0%
!!! TCATGTTTTTTGTCTTTCTG+AGG + chr5_3:24236285-24236304 Msa0806260:intron 30.0%
! TGTGTTTCTGCAATATCAAA+AGG - chr5_3:24236364-24236383 None:intergenic 30.0%
AAAAAAGAAACTGGTTGTGT+CGG + chr5_3:24236544-24236563 Msa0806260:five_prime_UTR 30.0%
! TCACATTCCTTATTTCAGAA+AGG + chr5_3:24236621-24236640 Msa0806260:five_prime_UTR 30.0%
!! TGACTAACCTTTCTGAAATA+AGG - chr5_3:24236631-24236650 None:intergenic 30.0%
! AGTTAACCAAATCTTTTGGA+TGG + chr5_3:24236835-24236854 Msa0806260:five_prime_UTR 30.0%
! GTTAACCAAATCTTTTGGAT+GGG + chr5_3:24236836-24236855 Msa0806260:five_prime_UTR 30.0%
ATGATGTCTAAGAACTTAAC+AGG + chr5_3:24236883-24236902 Msa0806260:five_prime_UTR 30.0%
TGATGTCTAAGAACTTAACA+GGG + chr5_3:24236884-24236903 Msa0806260:five_prime_UTR 30.0%
AAAGCTAGAAGACAAAATGA+AGG + chr5_3:24236917-24236936 Msa0806260:exon 30.0%
AGAAGACAAAATGAAGGTAA+AGG + chr5_3:24236923-24236942 Msa0806260:intron 30.0%
GTCTCGAAGATTATTTATTG+AGG + chr5_3:24237024-24237043 Msa0806260:intron 30.0%
CTATATTGAATGCATGAATG+TGG + chr5_3:24237114-24237133 Msa0806260:CDS 30.0%
GAAGAATGATGTGTAAACAA+TGG - chr5_3:24237198-24237217 None:intergenic 30.0%
! TGCTTCTTTTGATAAGTATG+TGG + chr5_3:24237294-24237313 Msa0806260:CDS 30.0%
CAACCAAAAGCTAAAATACA+TGG - chr5_3:24237389-24237408 None:intergenic 30.0%
TTCTTCAGCTTCAGTTAAAA+CGG + chr5_3:24237535-24237554 Msa0806260:CDS 30.0%
GGTGAGAAACAAATATTACA+GGG - chr5_3:24237717-24237736 None:intergenic 30.0%
TGGTGAGAAACAAATATTAC+AGG - chr5_3:24237718-24237737 None:intergenic 30.0%
CAAAACAAAATCACATCCAA+TGG - chr5_3:24237804-24237823 None:intergenic 30.0%
!!! TGGATGTGATTTTGTTTTGT+TGG + chr5_3:24237805-24237824 Msa0806260:intron 30.0%
TCTGTTTGCAATCAAGTTAA+TGG - chr5_3:24237883-24237902 None:intergenic 30.0%
CCTATCAAGATCTAATTGTA+AGG - chr5_3:24237927-24237946 None:intergenic 30.0%
CCTTACAATTAGATCTTGAT+AGG + chr5_3:24237924-24237943 Msa0806260:CDS 30.0%
TTAGATCTTGATAGGGATAA+TGG + chr5_3:24237932-24237951 Msa0806260:CDS 30.0%
TAGATCTTGATAGGGATAAT+GGG + chr5_3:24237933-24237952 Msa0806260:CDS 30.0%
AATACCTGTGAAGTGTATAA+AGG - chr5_3:24237997-24238016 None:intergenic 30.0%
CAGAAAATGAGAAAAACATG+AGG - chr5_3:24238326-24238345 None:intergenic 30.0%
! GTATTATTTGAAACTTCCCA+GGG - chr5_3:24238353-24238372 None:intergenic 30.0%
! AGTATTATTTGAAACTTCCC+AGG - chr5_3:24238354-24238373 None:intergenic 30.0%
TTAAGATGGATGGTAAGTTA+TGG + chr5_3:24238746-24238765 Msa0806260:three_prime_UTR 30.0%
ACATGATATGTGAACCTATT+TGG + chr5_3:24239051-24239070 Msa0806260:intron 30.0%
!! AAATCTCATTTTCGAGACAA+GGG - chr5_3:24239111-24239130 None:intergenic 30.0%
!! AAAATCTCATTTTCGAGACA+AGG - chr5_3:24239112-24239131 None:intergenic 30.0%
! TTGTCTCGAAAATGAGATTT+TGG + chr5_3:24239111-24239130 Msa0806260:intron 30.0%
! TGGCTACAAGTTTGATAATT+AGG + chr5_3:24239140-24239159 Msa0806260:intron 30.0%
ACATATCATGTTTCGCATTA+AGG - chr5_3:24239191-24239210 None:intergenic 30.0%
!!! ACCCTATTTGGTTTTGTATT+CGG + chr5_3:24239212-24239231 Msa0806260:intron 30.0%
ACCGAATACAAAACCAAATA+GGG - chr5_3:24239216-24239235 None:intergenic 30.0%
TACCGAATACAAAACCAAAT+AGG - chr5_3:24239217-24239236 None:intergenic 30.0%
TAGCCTATATGGTTAGATAA+AGG + chr5_3:24239361-24239380 Msa0806260:intron 30.0%
CAACCTTTATCTAACCATAT+AGG - chr5_3:24239367-24239386 None:intergenic 30.0%
TCGGTAAAATGTAAGTGTAT+TGG + chr5_3:24239448-24239467 Msa0806260:intron 30.0%
!! AAATCTCATTTTTGCGACAA+GGG - chr5_3:24239479-24239498 None:intergenic 30.0%
!! AAAATCTCATTTTTGCGACA+AGG - chr5_3:24239480-24239499 None:intergenic 30.0%
!! ATTTTAGCCTATATGGTTAG+AGG + chr5_3:24239357-24239376 Msa0806260:intron 30.0%
TATCAAACCTCTAACCATAT+AGG - chr5_3:24239505-24239524 None:intergenic 30.0%
TATGGTTAGAGGTTTGATAA+AGG + chr5_3:24239506-24239525 Msa0806260:intron 30.0%
! TCGGTAAAATGAAAGTGTAT+TGG + chr5_3:24239593-24239612 Msa0806260:intron 30.0%
!! AAATCTCATTTTTGCGACAA+GGG - chr5_3:24239479-24239498 None:intergenic 30.0%
!! AAAATCTCATTTTTGCGACA+AGG - chr5_3:24239480-24239499 None:intergenic 30.0%
! TCGGTAAAATGAAAGTGTAT+TGG + chr5_3:24239593-24239612 Msa0806260:intron 30.0%
!! AAATCTCATTTTTGCGACAA+GGG - chr5_3:24239479-24239498 None:intergenic 30.0%
!! AAAATCTCATTTTTGCGACA+AGG - chr5_3:24239480-24239499 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr5_3:24239051-24239070 Msa0806260:intron 30.0%
TACCGAATATGAAACCAAAT+AGG - chr5_3:24240018-24240037 None:intergenic 30.0%
AAACGAGAATTTAGCCTATA+TGG + chr5_3:24240070-24240089 Msa0806260:intron 30.0%
TTCGCATAAAGGGATATATA+GGG - chr5_3:24240130-24240149 None:intergenic 30.0%
TTTCGCATAAAGGGATATAT+AGG - chr5_3:24240131-24240150 None:intergenic 30.0%
GAAATCATATTTCGCATCAA+GGG - chr5_3:24240315-24240334 None:intergenic 30.0%
AGAAATCATATTTCGCATCA+AGG - chr5_3:24240316-24240335 None:intergenic 30.0%
! ATTTCTAAGCTGAGTTTGTT+TGG + chr5_3:24240330-24240349 Msa0806260:intron 30.0%
! AAACTGGAAGTATGAAAATG+TGG + chr5_3:24240361-24240380 Msa0806260:intron 30.0%
!! CTAAAATCATTTTCGGTTTG+AGG - chr5_3:24240396-24240415 None:intergenic 30.0%
ATGTGATATTTGAGCATAGA+AGG + chr5_3:24240478-24240497 Msa0806260:intron 30.0%
CTTCAAAACAATGGTCATAA+AGG - chr5_3:24240699-24240718 None:intergenic 30.0%
ATAAAGAAGGTTGAACTTGT+CGG + chr5_3:24240723-24240742 Msa0806260:intron 30.0%
AGTATATGCATCAAAAACAC+AGG - chr5_3:24240959-24240978 None:intergenic 30.0%
!! AAATCTCATTTTCGAGACAA+GGG - chr5_3:24239111-24239130 None:intergenic 30.0%
!! AAAATCTCATTTTCGAGACA+AGG - chr5_3:24239112-24239131 None:intergenic 30.0%
! TTGTCTCGAAAATGAGATTT+TGG + chr5_3:24239111-24239130 Msa0806260:intron 30.0%
! TGGCTACAAGTTTGATAATT+AGG + chr5_3:24239140-24239159 Msa0806260:intron 30.0%
CATATCATGTTTCGCATTAA+GGG - chr5_3:24239190-24239209 None:intergenic 30.0%
ACATATCATGTTTCGCATTA+AGG - chr5_3:24239191-24239210 None:intergenic 30.0%
!!! ACCCTATTTGGTTTTGTATT+CGG + chr5_3:24239212-24239231 Msa0806260:intron 30.0%
ACCGAATACAAAACCAAATA+GGG - chr5_3:24239216-24239235 None:intergenic 30.0%
TACCGAATACAAAACCAAAT+AGG - chr5_3:24239217-24239236 None:intergenic 30.0%
TAGCCTATATGGTTAGATAA+AGG + chr5_3:24239361-24239380 Msa0806260:intron 30.0%
CAACCTTTATCTAACCATAT+AGG - chr5_3:24239367-24239386 None:intergenic 30.0%
! TCGGTAAAATGAAAGTGTAT+TGG + chr5_3:24239593-24239612 Msa0806260:intron 30.0%
!! AAATCTCATTTTTGCGACAA+GGG - chr5_3:24239479-24239498 None:intergenic 30.0%
!! AAAATCTCATTTTTGCGACA+AGG - chr5_3:24239480-24239499 None:intergenic 30.0%
! TTCGGTAAATGAAAGTGTAT+TGG + chr5_3:24241697-24241716 Msa0806260:intron 30.0%
!! AAATCTCATTTTTGCGACAA+GGG - chr5_3:24239479-24239498 None:intergenic 30.0%
!! AAAATCTCATTTTTGCGACA+AGG - chr5_3:24239480-24239499 None:intergenic 30.0%
!! AGGCTAAAATCTCATTTTTG+CGG - chr5_3:24239485-24239504 None:intergenic 30.0%
! TCGGTAAAATGAAAGTGTAT+TGG + chr5_3:24239593-24239612 Msa0806260:intron 30.0%
!! AAATCTCATTTTTGCGACAA+GGG - chr5_3:24239479-24239498 None:intergenic 30.0%
!! AAAATCTCATTTTTGCGACA+AGG - chr5_3:24239480-24239499 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr5_3:24239051-24239070 Msa0806260:intron 30.0%
TACCGAATATGAAACCAAAT+AGG - chr5_3:24240018-24240037 None:intergenic 30.0%
!! AAACGAGATTTTAGCCTATA+TGG + chr5_3:24242314-24242333 Msa0806260:intron 30.0%
TTCGCATAAAGGGATATATA+GGG - chr5_3:24240130-24240149 None:intergenic 30.0%
TTTCGCATAAAGGGATATAT+AGG - chr5_3:24240131-24240150 None:intergenic 30.0%
! AAACTGGAAGTATGAAAATG+TGG + chr5_3:24240361-24240380 Msa0806260:intron 30.0%
!! CTAAAATCATTTTCGGTTTG+AGG - chr5_3:24240396-24240415 None:intergenic 30.0%
ATGTGATATTTGAGCATAGA+AGG + chr5_3:24240478-24240497 Msa0806260:intron 30.0%
CTTCAAAACAATGGTCATAA+AGG - chr5_3:24240699-24240718 None:intergenic 30.0%
ATAAAGAAGGTTGAACTTGT+CGG + chr5_3:24240723-24240742 Msa0806260:intron 30.0%
GTGAATAATAAGCGAAGAAG+GGG - chr5_3:24231262-24231281 None:intergenic 35.0%
ATGCGGAAATCGAAATCTTT+CGG - chr5_3:24231463-24231482 None:intergenic 35.0%
ATTGCAAGAACAACGAAATG+CGG - chr5_3:24231480-24231499 None:intergenic 35.0%
GATTTCAGTGAATGAATGTG+TGG + chr5_3:24232040-24232059 Msa0806260:intron 35.0%
! GGACTATTGACAATTTTTCG+AGG + chr5_3:24232235-24232254 Msa0806260:five_prime_UTR 35.0%
! TCACTATTGGTGGCTATAAA+TGG + chr5_3:24232286-24232305 Msa0806260:five_prime_UTR 35.0%
!! TATTGATTTAAACGTGCAGG+CGG + chr5_3:24232401-24232420 Msa0806260:intron 35.0%
!! TGAAATTTGCTCCCTTTTGT+GGG + chr5_3:24232649-24232668 Msa0806260:intron 35.0%
!! ACCCATTGATTCTGTAGTTA+AGG + chr5_3:24232879-24232898 Msa0806260:intron 35.0%
CCCTTAACTACAGAATCAAT+GGG - chr5_3:24232883-24232902 None:intergenic 35.0%
!! CCCATTGATTCTGTAGTTAA+GGG + chr5_3:24232880-24232899 Msa0806260:intron 35.0%
TCCCTTAACTACAGAATCAA+TGG - chr5_3:24232884-24232903 None:intergenic 35.0%
TTAAGGGATTAATCAGATGG+AGG + chr5_3:24232896-24232915 Msa0806260:intron 35.0%
! ATAGTCTATTTGCTAGACGT+TGG + chr5_3:24232919-24232938 Msa0806260:intron 35.0%
! TAGTCTATTTGCTAGACGTT+GGG + chr5_3:24232920-24232939 Msa0806260:intron 35.0%
GATTTGACCACACATTTGTT+AGG + chr5_3:24233044-24233063 Msa0806260:intron 35.0%
TTAGCTTCCAACTTCAACAT+TGG + chr5_3:24233094-24233113 Msa0806260:intron 35.0%
TTCCTCTATTCATGCCATTA+TGG + chr5_3:24233648-24233667 Msa0806260:intron 35.0%
TCCTCTATTCATGCCATTAT+GGG + chr5_3:24233649-24233668 Msa0806260:intron 35.0%
! CATATCGGTTATACCCATAA+TGG - chr5_3:24233665-24233684 None:intergenic 35.0%
! TTACAAAGGCCTGTTTTGTA+AGG - chr5_3:24233768-24233787 None:intergenic 35.0%
TTACAAAACAGGCCTTTGTA+AGG + chr5_3:24233767-24233786 Msa0806260:intron 35.0%
CGATGAGAATTTGTGAAAAG+AGG - chr5_3:24233802-24233821 None:intergenic 35.0%
ACCATGTTGAGATTGTATCT+CGG + chr5_3:24233932-24233951 Msa0806260:intron 35.0%
TGTATCTCGGTTGTTAATAG+CGG + chr5_3:24233945-24233964 Msa0806260:intron 35.0%
CATGGTCAAAATCGTACAAT+CGG + chr5_3:24234128-24234147 Msa0806260:intron 35.0%
CATTTCAGCATTGTTAACAG+AGG + chr5_3:24234394-24234413 Msa0806260:intron 35.0%
GCTATACCGCTATATTGTAT+AGG - chr5_3:24234435-24234454 None:intergenic 35.0%
ATAACACTCGGGTATATGTT+TGG + chr5_3:24234475-24234494 Msa0806260:intron 35.0%
TGTGAATGTGTATGGTAACT+TGG - chr5_3:24234744-24234763 None:intergenic 35.0%
ATGTTGAAGATTATCGAGAG+TGG + chr5_3:24234883-24234902 Msa0806260:intron 35.0%
TTATCGAGAGTGGTAAAGTT+AGG + chr5_3:24234893-24234912 Msa0806260:intron 35.0%
GGATGTTGTTGTAGGTTATT+TGG + chr5_3:24234914-24234933 Msa0806260:intron 35.0%
ATATCCTCCAACAAGTTAAG+TGG + chr5_3:24235072-24235091 Msa0806260:intron 35.0%
!! CAACAAACCACTTAACTTGT+TGG - chr5_3:24235082-24235101 None:intergenic 35.0%
TGTTGAACAACTTTCTTAGC+AGG + chr5_3:24235097-24235116 Msa0806260:intron 35.0%
TGTTTGCATCAAAAAAGAGG+GGG - chr5_3:24235176-24235195 None:intergenic 35.0%
GTGTTTGCATCAAAAAAGAG+GGG - chr5_3:24235177-24235196 None:intergenic 35.0%
ATCCATCCTATTGTTAAAGC+GGG - chr5_3:24235383-24235402 None:intergenic 35.0%
CATCCATCCTATTGTTAAAG+CGG - chr5_3:24235384-24235403 None:intergenic 35.0%
CCTATACATGACATCTTCTA+CGG - chr5_3:24235424-24235443 None:intergenic 35.0%
CGTCCTTCAAGAAAAGTAAT+TGG - chr5_3:24235450-24235469 None:intergenic 35.0%
!! ACATGGGATTTTGAGGATAT+TGG + chr5_3:24235476-24235495 Msa0806260:intron 35.0%
TGACTCTTCTTAAAGTAACC+CGG - chr5_3:24235532-24235551 None:intergenic 35.0%
GTAGTGTTAGATATCCAGTT+TGG + chr5_3:24235682-24235701 Msa0806260:intron 35.0%
! ATCTTTTGTTGGAACCTAAG+AGG + chr5_3:24235824-24235843 Msa0806260:intron 35.0%
GGAGAGTTGAATACTTATGT+TGG + chr5_3:24236225-24236244 Msa0806260:intron 35.0%
!! CTTTCTGAGGATAACTTGTT+TGG + chr5_3:24236298-24236317 Msa0806260:intron 35.0%
GAATTGTATGATCCTAGTAG+AGG + chr5_3:24236442-24236461 Msa0806260:five_prime_UTR 35.0%
TGCGCAAAAATCTTGATTAC+TGG + chr5_3:24236509-24236528 Msa0806260:five_prime_UTR 35.0%
GCGCAAAAATCTTGATTACT+GGG + chr5_3:24236510-24236529 Msa0806260:five_prime_UTR 35.0%
CGTGACTCAAAAAAAGAAAC+TGG + chr5_3:24236535-24236554 Msa0806260:five_prime_UTR 35.0%
! TTTCAGAAAGGTTAGTCAGT+AGG + chr5_3:24236633-24236652 Msa0806260:intron 35.0%
! TTCAGAAAGGTTAGTCAGTA+GGG + chr5_3:24236634-24236653 Msa0806260:intron 35.0%
CATAAGACACATCCTTCTTT+CGG - chr5_3:24236681-24236700 None:intergenic 35.0%
ACTGAAAATGATATGCCATC+TGG + chr5_3:24236741-24236760 Msa0806260:five_prime_UTR 35.0%
CTGAAAATGATATGCCATCT+GGG + chr5_3:24236742-24236761 Msa0806260:five_prime_UTR 35.0%
TGTATCCCATCCAAAAGATT+TGG - chr5_3:24236844-24236863 None:intergenic 35.0%
ACCATACAGAAGTTGTTTGA+AGG + chr5_3:24237079-24237098 Msa0806260:CDS 35.0%
!!! GGTAGGTATTTTTTGGCTTT+AGG + chr5_3:24237169-24237188 Msa0806260:intron 35.0%
!! TCATTTTCAGGAAGCAAGAA+AGG + chr5_3:24237485-24237504 Msa0806260:intron 35.0%
!! CATTTTCAGGAAGCAAGAAA+GGG + chr5_3:24237486-24237505 Msa0806260:intron 35.0%
TTTAACTGAAGCTGAAGAAC+AGG - chr5_3:24237534-24237553 None:intergenic 35.0%
AAATTCACAGAAGCCCAAAA+TGG - chr5_3:24237692-24237711 None:intergenic 35.0%
TTAATGGCCATTACAGTTAC+AGG - chr5_3:24237867-24237886 None:intergenic 35.0%
CTCCTAACTGAACATGATAT+CGG + chr5_3:24238178-24238197 Msa0806260:three_prime_UTR 35.0%
TTCCGATATCATGTTCAGTT+AGG - chr5_3:24238183-24238202 None:intergenic 35.0%
ATACCTGTCTATCTTACATG+TGG + chr5_3:24238458-24238477 Msa0806260:three_prime_UTR 35.0%
GCAACCACTTCTGTTTATAT+CGG + chr5_3:24238618-24238637 Msa0806260:three_prime_UTR 35.0%
CAACCACTTCTGTTTATATC+GGG + chr5_3:24238619-24238638 Msa0806260:three_prime_UTR 35.0%
TTTCCCGATATAAACAGAAG+TGG - chr5_3:24238625-24238644 None:intergenic 35.0%
!!! TGGTAAGTTATGGTTTTAGC+AGG + chr5_3:24238756-24238775 Msa0806260:three_prime_UTR 35.0%
CTCTTATAGAGTAGATGCAT+CGG - chr5_3:24238956-24238975 None:intergenic 35.0%
GGTTCACATATCATGTTTCA+TGG - chr5_3:24239047-24239066 None:intergenic 35.0%
!! AAATGAGATTTTGGCCTACA+TGG + chr5_3:24239120-24239139 Msa0806260:intron 35.0%
TATCAAACTTGTAGCCATGT+AGG - chr5_3:24239137-24239156 None:intergenic 35.0%
TTCGCATTAAGGAACATCAA+GGG - chr5_3:24239180-24239199 None:intergenic 35.0%
TTTCGCATTAAGGAACATCA+AGG - chr5_3:24239181-24239200 None:intergenic 35.0%
ACATGATATGTGACCCTATT+TGG + chr5_3:24239200-24239219 Msa0806260:intron 35.0%
! AAAATCTCATTTTCGCGACA+AGG - chr5_3:24239261-24239280 None:intergenic 35.0%
! TTGTCGCGAAAATGAGATTT+TGG + chr5_3:24239260-24239279 Msa0806260:intron 35.0%
CATATCATGTTTCGCATCAA+GGG - chr5_3:24239991-24240010 None:intergenic 35.0%
ACATATCATGTTTCGCATCA+AGG - chr5_3:24239992-24240011 None:intergenic 35.0%
TTGTTTGGATTTCGCTAAAC+TGG + chr5_3:24240345-24240364 Msa0806260:intron 35.0%
!! AAATGAGATTTTGGCCTACA+TGG + chr5_3:24239120-24239139 Msa0806260:intron 35.0%
TATCAAACTTGTAGCCATGT+AGG - chr5_3:24239137-24239156 None:intergenic 35.0%
ACATGATATGTGACCCTATT+TGG + chr5_3:24239200-24239219 Msa0806260:intron 35.0%
! AAAATCTCATTTTCGCGACA+AGG - chr5_3:24239261-24239280 None:intergenic 35.0%
! TTGTCGCGAAAATGAGATTT+TGG + chr5_3:24239260-24239279 Msa0806260:intron 35.0%
! TCGGTAAACTGAAAGTGTAT+TGG + chr5_3:24241842-24241861 Msa0806260:intron 35.0%
!! GGCTAAAATCTCATTTTTGC+GGG - chr5_3:24239484-24239503 None:intergenic 35.0%
CATATCATGTTTCGCATCAA+GGG - chr5_3:24239991-24240010 None:intergenic 35.0%
ACATATCATGTTTCGCATCA+AGG - chr5_3:24239992-24240011 None:intergenic 35.0%
TTGTTTGGATTTCGCTAAAC+TGG + chr5_3:24240345-24240364 Msa0806260:intron 35.0%
AGTATATGCATCAGAAACAC+AGG - chr5_3:24241053-24241072 None:intergenic 35.0%
AGCATCAGTTGCGTTTACTA+CGG - chr5_3:24231209-24231228 None:intergenic 40.0%
ACGCGATTGATTACCTCTAA+CGG - chr5_3:24231414-24231433 None:intergenic 40.0%
GTAGCAACAGAATCTTGAAG+TGG + chr5_3:24231613-24231632 Msa0806260:intron 40.0%
ACAACAACAGCATCAGAGTT+AGG - chr5_3:24231656-24231675 None:intergenic 40.0%
! TCTGATGCTGTTGTTGTTGA+AGG + chr5_3:24231659-24231678 Msa0806260:five_prime_UTR 40.0%
CACATTGCATTACCTTCCAT+AGG - chr5_3:24231692-24231711 None:intergenic 40.0%
TGGAAGGTAATGCAATGTGA+TGG + chr5_3:24231693-24231712 Msa0806260:intron 40.0%
AGCAGAAAACACAAGTACAG+TGG + chr5_3:24232170-24232189 Msa0806260:five_prime_UTR 40.0%
! TCCGATGTTTTCACTATTGG+TGG + chr5_3:24232276-24232295 Msa0806260:five_prime_UTR 40.0%
GCCACCAATAGTGAAAACAT+CGG - chr5_3:24232280-24232299 None:intergenic 40.0%
GCAAATCTAGTCCAACCATA+AGG - chr5_3:24232502-24232521 None:intergenic 40.0%
!! CTGAAATTTGCTCCCTTTTG+TGG + chr5_3:24232648-24232667 Msa0806260:intron 40.0%
!! GAAATTTGCTCCCTTTTGTG+GGG + chr5_3:24232650-24232669 Msa0806260:intron 40.0%
ACATTTAGCACCCCACAAAA+GGG - chr5_3:24232663-24232682 None:intergenic 40.0%
AACATTTAGCACCCCACAAA+AGG - chr5_3:24232664-24232683 None:intergenic 40.0%
! AGTCTATTTGCTAGACGTTG+GGG + chr5_3:24232921-24232940 Msa0806260:intron 40.0%
TAACCCAAAGTGAATCTAGG+TGG - chr5_3:24233015-24233034 None:intergenic 40.0%
GACTAACCCAAAGTGAATCT+AGG - chr5_3:24233018-24233037 None:intergenic 40.0%
! GACCACACATTTGTTAGGTT+TGG + chr5_3:24233049-24233068 Msa0806260:intron 40.0%
AGCCAAACCTAACAAATGTG+TGG - chr5_3:24233054-24233073 None:intergenic 40.0%
GCAAGAACCAATGTTGAAGT+TGG - chr5_3:24233104-24233123 None:intergenic 40.0%
! AAATAGTGGAAGCCGCAAAA+CGG + chr5_3:24233200-24233219 Msa0806260:intron 40.0%
! TTCTCATCGGACTTTTGTCT+CGG - chr5_3:24233551-24233570 None:intergenic 40.0%
ACCCATAATGGCATGAATAG+AGG - chr5_3:24233653-24233672 None:intergenic 40.0%
CAAAATAGCGGCAAGCATAT+CGG - chr5_3:24233680-24233699 None:intergenic 40.0%
TTTGTATCGTCCGTTGAAGT+TGG + chr5_3:24233731-24233750 Msa0806260:intron 40.0%
TTGTATCGTCCGTTGAAGTT+GGG + chr5_3:24233732-24233751 Msa0806260:intron 40.0%
TGAGTTATGCCCAACTTCAA+CGG - chr5_3:24233744-24233763 None:intergenic 40.0%
TGAGAAAAGCCCAATAGTGT+AGG - chr5_3:24233831-24233850 None:intergenic 40.0%
ACCGAGATACAATCTCAACA+TGG - chr5_3:24233936-24233955 None:intergenic 40.0%
!!! GCATCGCGTTTTGTCATTTT+AGG - chr5_3:24233997-24234016 None:intergenic 40.0%
!! GTACCCTTCATCCTTTTTCA+CGG + chr5_3:24234176-24234195 Msa0806260:intron 40.0%
TGACCGTGAAAAAGGATGAA+GGG - chr5_3:24234182-24234201 None:intergenic 40.0%
TTGACCGTGAAAAAGGATGA+AGG - chr5_3:24234183-24234202 None:intergenic 40.0%
TCTTCTCTTGACCGTGAAAA+AGG - chr5_3:24234190-24234209 None:intergenic 40.0%
GATTGTACTGTGAAAAACCG+AGG + chr5_3:24234259-24234278 Msa0806260:intron 40.0%
TTTCATTCACTTCTCCTCCT+CGG - chr5_3:24234279-24234298 None:intergenic 40.0%
AACAATGCTGAAATGCAGCA+CGG - chr5_3:24234389-24234408 None:intergenic 40.0%
TATGTTTGGATGGAAGGTCT+TGG + chr5_3:24234489-24234508 Msa0806260:intron 40.0%
! TTTGGGAGGAGAATTTTGGA+GGG - chr5_3:24234700-24234719 None:intergenic 40.0%
!! TTTTGGGAGGAGAATTTTGG+AGG - chr5_3:24234701-24234720 None:intergenic 40.0%
!! GACTTTTGGGAGGAGAATTT+TGG - chr5_3:24234704-24234723 None:intergenic 40.0%
! AAATACTAGGGACTTTTGGG+AGG - chr5_3:24234714-24234733 None:intergenic 40.0%
GTTGGAGGATATTTGTCAGA+AGG - chr5_3:24235064-24235083 None:intergenic 40.0%
!! CAAACCACTTAACTTGTTGG+AGG - chr5_3:24235079-24235098 None:intergenic 40.0%
CAACTTTCTTAGCAGGAATC+AGG + chr5_3:24235104-24235123 Msa0806260:intron 40.0%
TGCTTTCCCGCTTTAACAAT+AGG + chr5_3:24235374-24235393 Msa0806260:intron 40.0%
TTCCCGCTTTAACAATAGGA+TGG + chr5_3:24235378-24235397 Msa0806260:intron 40.0%
CCGTAGAAGATGTCATGTAT+AGG + chr5_3:24235421-24235440 Msa0806260:intron 40.0%
TTGAAGGACGACATCTACAT+GGG + chr5_3:24235460-24235479 Msa0806260:intron 40.0%
! GACATCTACATGGGATTTTG+AGG + chr5_3:24235469-24235488 Msa0806260:intron 40.0%
GACTCTTCTTAAAGTAACCC+GGG - chr5_3:24235531-24235550 None:intergenic 40.0%
!! TGATGTGACCAGTTTGTTAC+AGG + chr5_3:24235751-24235770 Msa0806260:intron 40.0%
TGTTGGAACCTAAGAGGTTT+AGG + chr5_3:24235830-24235849 Msa0806260:intron 40.0%
TCTCTCTTCCTAAACCTCTT+AGG - chr5_3:24235841-24235860 None:intergenic 40.0%
AGAGAGACATGTCTCTTCTT+TGG + chr5_3:24235856-24235875 Msa0806260:intron 40.0%
GAGAGACATGTCTCTTCTTT+GGG + chr5_3:24235857-24235876 Msa0806260:intron 40.0%
AGAGACATGTCTCTTCTTTG+GGG + chr5_3:24235858-24235877 Msa0806260:intron 40.0%
GGATCATACAATTCAGCAAG+AGG - chr5_3:24236436-24236455 None:intergenic 40.0%
!! TGTGTCGGTTTGAAAAACCA+AGG + chr5_3:24236559-24236578 Msa0806260:five_prime_UTR 40.0%
TCATGTAACAAGTAGCTCCT+TGG - chr5_3:24236579-24236598 None:intergenic 40.0%
! GGCATATCATTTTCAGTCGT+GGG - chr5_3:24236738-24236757 None:intergenic 40.0%
! TGGCATATCATTTTCAGTCG+TGG - chr5_3:24236739-24236758 None:intergenic 40.0%
ACAAACTCTGTAATGCCAGA+GGG - chr5_3:24236773-24236792 None:intergenic 40.0%
AACAAACTCTGTAATGCCAG+AGG - chr5_3:24236774-24236793 None:intergenic 40.0%
!! TATTGAGGCTTCCACTTTTC+AGG + chr5_3:24237039-24237058 Msa0806260:intron 40.0%
!! ATTGAGGCTTCCACTTTTCA+GGG + chr5_3:24237040-24237059 Msa0806260:intron 40.0%
GCCTTCAAACAACTTCTGTA+TGG - chr5_3:24237083-24237102 None:intergenic 40.0%
GATCTTCAGCTTGATGTCAA+AGG + chr5_3:24237256-24237275 Msa0806260:intron 40.0%
AAGTATCATGCAGAGCAGTA+TGG + chr5_3:24237343-24237362 Msa0806260:CDS 40.0%
CCAGAGTAGGAAAAGAAGTT+TGG - chr5_3:24237738-24237757 None:intergenic 40.0%
! CCAAACTTCTTTTCCTACTC+TGG + chr5_3:24237735-24237754 Msa0806260:intron 40.0%
ATTGTAAGGGGAACTCATAG+CGG - chr5_3:24237913-24237932 None:intergenic 40.0%
CGAATACTTCTATCTGCGTT+AGG - chr5_3:24237971-24237990 None:intergenic 40.0%
GCAACCTTTATACACTTCAC+AGG + chr5_3:24237990-24238009 Msa0806260:CDS 40.0%
TGCAGGCATAAGTTGTCAAT+CGG + chr5_3:24238253-24238272 Msa0806260:intron 40.0%
CATAAGTTGTCAATCGGAAG+TGG + chr5_3:24238259-24238278 Msa0806260:intron 40.0%
CAACTTAGCTATCTCTGACT+CGG - chr5_3:24238303-24238322 None:intergenic 40.0%
! TTCTCATTTTCTGACTTCCC+TGG + chr5_3:24238333-24238352 Msa0806260:intron 40.0%
! TCTCATTTTCTGACTTCCCT+GGG + chr5_3:24238334-24238353 Msa0806260:intron 40.0%
TATCTTACATGTGGCGATGT+AGG + chr5_3:24238467-24238486 Msa0806260:three_prime_UTR 40.0%
GTAAAGCTTGTGCACTTCAT+AGG + chr5_3:24238522-24238541 Msa0806260:three_prime_UTR 40.0%
! AAAATCTCGTTTTCGCAGCA+AGG - chr5_3:24239918-24239937 None:intergenic 40.0%
TATAAAGGTTGAACCCTCGA+TGG + chr5_3:24239965-24239984 Msa0806260:intron 40.0%
! AATTCTCGTTTTCGCGACAA+AGG - chr5_3:24240061-24240080 None:intergenic 40.0%
! GTTTCCAATTTTCGCGTCAA+GGG - chr5_3:24240562-24240581 None:intergenic 40.0%
! AGTTTCCAATTTTCGCGTCA+AGG - chr5_3:24240563-24240582 None:intergenic 40.0%
TTCACATCAACTGACATCGA+GGG - chr5_3:24240623-24240642 None:intergenic 40.0%
TTTCACATCAACTGACATCG+AGG - chr5_3:24240624-24240643 None:intergenic 40.0%
!!! GGACTAGTTATGGTTTTAGC+AGG + chr5_3:24240768-24240787 Msa0806260:intron 40.0%
TTCGCATTAAGGGACATCAA+GGG - chr5_3:24241286-24241305 None:intergenic 40.0%
TTTCGCATTAAGGGACATCA+AGG - chr5_3:24241287-24241306 None:intergenic 40.0%
! AAAATCTCGTTTTCGCAGCA+AGG - chr5_3:24239918-24239937 None:intergenic 40.0%
TATAAAGGTTGAACCCTCGA+TGG + chr5_3:24239965-24239984 Msa0806260:intron 40.0%
! AAATCTCGTTTTCGCGACAA+GGG - chr5_3:24242305-24242324 None:intergenic 40.0%
! AAAATCTCGTTTTCGCGACA+AGG - chr5_3:24242306-24242325 None:intergenic 40.0%
TGATTCTTGTCGCGAAAATG+AGG + chr5_3:24242474-24242493 Msa0806260:intron 40.0%
! GTTTCCAATTTTCGCGTCAA+GGG - chr5_3:24240562-24240581 None:intergenic 40.0%
! AGTTTCCAATTTTCGCGTCA+AGG - chr5_3:24240563-24240582 None:intergenic 40.0%
TTCACATCAACTGACATCGA+GGG - chr5_3:24240623-24240642 None:intergenic 40.0%
TTTCACATCAACTGACATCG+AGG - chr5_3:24240624-24240643 None:intergenic 40.0%
!!! GGACTAGTTATGGTTTTAGC+AGG + chr5_3:24240768-24240787 Msa0806260:intron 40.0%
!!! GGGAAGATGGGTTTTGGTTT+GGG - chr5_3:24231242-24231261 None:intergenic 45.0%
!! AAGAAGGGGAAGATGGGTTT+TGG - chr5_3:24231248-24231267 None:intergenic 45.0%
TAAGCGAAGAAGGGGAAGAT+GGG - chr5_3:24231254-24231273 None:intergenic 45.0%
ATAAGCGAAGAAGGGGAAGA+TGG - chr5_3:24231255-24231274 None:intergenic 45.0%
GGGGTTTGCGAATGATGAAA+GGG - chr5_3:24231336-24231355 None:intergenic 45.0%
TGGGGTTTGCGAATGATGAA+AGG - chr5_3:24231337-24231356 None:intergenic 45.0%
ATGAAGCGAGCGAAGAAACT+GGG - chr5_3:24231356-24231375 None:intergenic 45.0%
CGATTGATTACCTCTAACGG+AGG - chr5_3:24231411-24231430 None:intergenic 45.0%
TGTTGAAGGTCCTCAACCTA+TGG + chr5_3:24231673-24231692 Msa0806260:five_prime_UTR 45.0%
GCATTACCTTCCATAGGTTG+AGG - chr5_3:24231686-24231705 None:intergenic 45.0%
GATGAATGTGCGCAACGAAA+TGG + chr5_3:24231839-24231858 Msa0806260:intron 45.0%
CAGTTGAAGATCCGCCAATT+GGG + chr5_3:24232202-24232221 Msa0806260:five_prime_UTR 45.0%
CATGTGAATCTCCCAATTGG+CGG - chr5_3:24232216-24232235 None:intergenic 45.0%
GTCCATGTGAATCTCCCAAT+TGG - chr5_3:24232219-24232238 None:intergenic 45.0%
TGGATTAACAGCGTCAGAAG+TGG - chr5_3:24232321-24232340 None:intergenic 45.0%
CGGATACTGATCTTTCCGAA+GGG + chr5_3:24232421-24232440 Msa0806260:five_prime_UTR 45.0%
GGATACTGATCTTTCCGAAG+GGG + chr5_3:24232422-24232441 Msa0806260:five_prime_UTR 45.0%
TGTTCAGCATTGTTCCCCTT+CGG - chr5_3:24232439-24232458 None:intergenic 45.0%
TGCACAGTTCAGCTTAACTG+TGG + chr5_3:24232519-24232538 Msa0806260:five_prime_UTR 45.0%
CAGCTTAACTGTGGTCAATC+AGG + chr5_3:24232528-24232547 Msa0806260:five_prime_UTR 45.0%
AATGAAGGGCAATAGGGTCT+TGG + chr5_3:24232720-24232739 Msa0806260:intron 45.0%
GAATCTAGGTGGTCCAAACA+TGG - chr5_3:24233004-24233023 None:intergenic 45.0%
TGGACCACCTAGATTCACTT+TGG + chr5_3:24233008-24233027 Msa0806260:intron 45.0%
GGACCACCTAGATTCACTTT+GGG + chr5_3:24233009-24233028 Msa0806260:intron 45.0%
!! CTGGCATACCCTTAGCTTTA+AGG - chr5_3:24233143-24233162 None:intergenic 45.0%
! TCTCATCGGACTTTTGTCTC+GGG - chr5_3:24233550-24233569 None:intergenic 45.0%
! CGATATGCTTGCCGCTATTT+TGG + chr5_3:24233678-24233697 Msa0806260:intron 45.0%
AAACAGGCCTTTGTAAGGTG+AGG + chr5_3:24233772-24233791 Msa0806260:intron 45.0%
AGGTACTCCTCACCTTACAA+AGG - chr5_3:24233782-24233801 None:intergenic 45.0%
ATCGGAGAGTCCTACACTAT+TGG + chr5_3:24233818-24233837 Msa0806260:intron 45.0%
TCGGAGAGTCCTACACTATT+GGG + chr5_3:24233819-24233838 Msa0806260:intron 45.0%
!! GCTTGGTGCGTGTGTATAAT+TGG + chr5_3:24233881-24233900 Msa0806260:intron 45.0%
GGTGCGTGTGTATAATTGGT+CGG + chr5_3:24233885-24233904 Msa0806260:intron 45.0%
TGTACTGTGAAAAACCGAGG+AGG + chr5_3:24234262-24234281 Msa0806260:intron 45.0%
GAGGAGGAGAAGTGAATGAA+AGG + chr5_3:24234278-24234297 Msa0806260:intron 45.0%
!! GCGGTATAGCGCTGATATAT+TGG + chr5_3:24234445-24234464 Msa0806260:intron 45.0%
CACTCGGGTATATGTTTGGA+TGG + chr5_3:24234479-24234498 Msa0806260:intron 45.0%
CGGGTATATGTTTGGATGGA+AGG + chr5_3:24234483-24234502 Msa0806260:intron 45.0%
TTTGGATGGAAGGTCTTGGA+GGG + chr5_3:24234493-24234512 Msa0806260:intron 45.0%
!! TTGGGAGGAGAATTTTGGAG+GGG - chr5_3:24234699-24234718 None:intergenic 45.0%
TCACTAGGGGAACAAAACAC+TGG - chr5_3:24234998-24235017 None:intergenic 45.0%
CTTGAAGGACGACATCTACA+TGG + chr5_3:24235459-24235478 Msa0806260:intron 45.0%
GTCACAAAGATCTCTTCCTC+TGG + chr5_3:24235548-24235567 Msa0806260:intron 45.0%
AGATCTCTTCCTCTGGTCAT+AGG + chr5_3:24235555-24235574 Msa0806260:intron 45.0%
! CAAAAATAGCCTTGCCCTCA+AGG - chr5_3:24235653-24235672 None:intergenic 45.0%
!!! GGGCAAGGCTATTTTTGTAG+CGG + chr5_3:24235656-24235675 Msa0806260:intron 45.0%
!!! AAGGCTATTTTTGTAGCGGC+AGG + chr5_3:24235660-24235679 Msa0806260:intron 45.0%
!! AAGTGGGCTGGATAGGAAAT+GGG + chr5_3:24235718-24235737 Msa0806260:intron 45.0%
!! TGTGACCAGTTTGTTACAGG+AGG + chr5_3:24235754-24235773 Msa0806260:intron 45.0%
!! CAGTTTGTTACAGGAGGATC+CGG + chr5_3:24235760-24235779 Msa0806260:intron 45.0%
!! AGTTTGTTACAGGAGGATCC+GGG + chr5_3:24235761-24235780 Msa0806260:intron 45.0%
TTAATGCGCGTGAGAGTGAT+TGG + chr5_3:24236392-24236411 Msa0806260:five_prime_UTR 45.0%
TAATGCGCGTGAGAGTGATT+GGG + chr5_3:24236393-24236412 Msa0806260:five_prime_UTR 45.0%
TCCTAGTAGAGGCTATGTTG+TGG + chr5_3:24236453-24236472 Msa0806260:five_prime_UTR 45.0%
TCCACAACATAGCCTCTACT+AGG - chr5_3:24236457-24236476 None:intergenic 45.0%
GGAAGACAGATGCATACTTG+AGG + chr5_3:24236474-24236493 Msa0806260:five_prime_UTR 45.0%
CACAACAGTTCCCTGAAAAG+TGG - chr5_3:24237053-24237072 None:intergenic 45.0%
!! CACTTTTCAGGGAACTGTTG+TGG + chr5_3:24237051-24237070 Msa0806260:intron 45.0%
TTTCAGGGAACTGTTGTGGA+AGG + chr5_3:24237055-24237074 Msa0806260:intron 45.0%
TGTGGAAGTAGAACAGCTTG+AGG + chr5_3:24237312-24237331 Msa0806260:CDS 45.0%
GTGGAAGTAGAACAGCTTGA+GGG + chr5_3:24237313-24237332 Msa0806260:CDS 45.0%
TGCAGAGCAGTATGGTTTAC+AGG + chr5_3:24237351-24237370 Msa0806260:CDS 45.0%
AACTGAAGCTGAAGAACAGG+TGG - chr5_3:24237531-24237550 None:intergenic 45.0%
! TGATTTTGCGCGAGACACTA+TGG + chr5_3:24237566-24237585 Msa0806260:CDS 45.0%
TTCGACGCCTGTAACTGTAA+TGG + chr5_3:24237857-24237876 Msa0806260:intron 45.0%
CTTGACACTGATGCATCTAG+CGG - chr5_3:24238151-24238170 None:intergenic 45.0%
! AGTACTGAAACTGAAGCTGC+AGG + chr5_3:24238236-24238255 Msa0806260:intron 45.0%
TTGTCAATCGGAAGTGGAGA+TGG + chr5_3:24238265-24238284 Msa0806260:intron 45.0%
TCGCCACATGTAAGATAGAC+AGG - chr5_3:24238464-24238483 None:intergenic 45.0%
!! TGTAGGCTTTGAAGAGACGT+TGG + chr5_3:24238484-24238503 Msa0806260:three_prime_UTR 45.0%
AGTAGATGCATCGGAAACAC+AGG - chr5_3:24238947-24238966 None:intergenic 45.0%
CGCATCATGTTTCGCATCAA+GGG - chr5_3:24239329-24239348 None:intergenic 45.0%
TCGCATCATGTTTCGCATCA+AGG - chr5_3:24239330-24239349 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24239397-24239416 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24239398-24239417 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24239397-24239416 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24239398-24239417 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24239397-24239416 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24239398-24239417 None:intergenic 45.0%
TACGCATCAAAGGACATCGA+GGG - chr5_3:24239838-24239857 None:intergenic 45.0%
TTACGCATCAAAGGACATCG+AGG - chr5_3:24239839-24239858 None:intergenic 45.0%
TGACTCTTGTCGCGAAAATG+AGG + chr5_3:24240230-24240249 Msa0806260:intron 45.0%
ATGACCCTTGACGCGAAAAT+TGG + chr5_3:24240555-24240574 Msa0806260:intron 45.0%
CGCATCATGTTTCGCATCAA+GGG - chr5_3:24239329-24239348 None:intergenic 45.0%
TCGCATCATGTTTCGCATCA+AGG - chr5_3:24239330-24239349 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+AGG - chr5_3:24239397-24239416 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24239397-24239416 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24239398-24239417 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24239397-24239416 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24239398-24239417 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24239397-24239416 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24239398-24239417 None:intergenic 45.0%
TACGCATCAAAGGACATCGA+GGG - chr5_3:24239838-24239857 None:intergenic 45.0%
TTACGCATCAAAGGACATCG+AGG - chr5_3:24239839-24239858 None:intergenic 45.0%
ATGACCCTTGACGCGAAAAT+TGG + chr5_3:24240555-24240574 Msa0806260:intron 45.0%
!! TTAATATAAATTTGATAAAT+AGG + chr5_3:24240417-24240436 Msa0806260:intron 5.0%
!! TTAATATAAATTTGATAAAT+AGG + chr5_3:24240417-24240436 Msa0806260:intron 5.0%
!!! GGGGAAGATGGGTTTTGGTT+TGG - chr5_3:24231243-24231262 None:intergenic 50.0%
TGAAGCGAGCGAAGAAACTG+GGG - chr5_3:24231355-24231374 None:intergenic 50.0%
GATGAAGCGAGCGAAGAAAC+TGG - chr5_3:24231357-24231376 None:intergenic 50.0%
! AGGAGTGGTGGTGATAGTCA+TGG - chr5_3:24231391-24231410 None:intergenic 50.0%
GATTACCTCTAACGGAGGAG+TGG - chr5_3:24231406-24231425 None:intergenic 50.0%
GAAGGTCCTCAACCTATGGA+AGG + chr5_3:24231677-24231696 Msa0806260:five_prime_UTR 50.0%
CACAAGTACAGTGGATGCTG+TGG + chr5_3:24232179-24232198 Msa0806260:five_prime_UTR 50.0%
GCAGTTGAAGATCCGCCAAT+TGG + chr5_3:24232201-24232220 Msa0806260:five_prime_UTR 50.0%
CGCCAATTGGGAGATTCACA+TGG + chr5_3:24232214-24232233 Msa0806260:five_prime_UTR 50.0%
GCGGATACTGATCTTTCCGA+AGG + chr5_3:24232420-24232439 Msa0806260:five_prime_UTR 50.0%
GATGCAGGTTCGATGCCTTA+TGG + chr5_3:24232484-24232503 Msa0806260:five_prime_UTR 50.0%
CAGGTTCGATGCCTTATGGT+TGG + chr5_3:24232488-24232507 Msa0806260:five_prime_UTR 50.0%
GCAATAGGGTCTTGGCAGTT+TGG + chr5_3:24232728-24232747 Msa0806260:intron 50.0%
! AATAGTGTTGGGCGCAAGGA+GGG - chr5_3:24233859-24233878 None:intergenic 50.0%
TCCTTGCGCCCAACACTATT+GGG + chr5_3:24233859-24233878 Msa0806260:intron 50.0%
GCACCAAGCCCAATAGTGTT+GGG - chr5_3:24233870-24233889 None:intergenic 50.0%
GCGTGTGTATAATTGGTCGG+TGG + chr5_3:24233888-24233907 Msa0806260:intron 50.0%
TTGTTAATAGCGGCCGCTAC+CGG + chr5_3:24233955-24233974 Msa0806260:intron 50.0%
GTTGGAGAAAGCGAGTGAAG+CGG + chr5_3:24234036-24234055 Msa0806260:intron 50.0%
TGGCCAAAATCGGGTCTAAG+CGG + chr5_3:24234080-24234099 Msa0806260:intron 50.0%
AAGCGTATACTCCGATCCAG+CGG - chr5_3:24234156-24234175 None:intergenic 50.0%
GTTTGGATGGAAGGTCTTGG+AGG + chr5_3:24234492-24234511 Msa0806260:intron 50.0%
TTGGATGGAAGGTCTTGGAG+GGG + chr5_3:24234494-24234513 Msa0806260:intron 50.0%
!! GAGGAGAATTTTGGAGGGGA+GGG - chr5_3:24234695-24234714 None:intergenic 50.0%
GGTTATTCCATGGTCATGCC+CGG + chr5_3:24235510-24235529 Msa0806260:intron 50.0%
GTTATTCCATGGTCATGCCC+GGG + chr5_3:24235511-24235530 Msa0806260:intron 50.0%
TTATCACAGCCTTGAGGGCA+AGG + chr5_3:24235641-24235660 Msa0806260:intron 50.0%
TCCTATCCAGCCCACTTGTT+GGG - chr5_3:24235715-24235734 None:intergenic 50.0%
TTCCTATCCAGCCCACTTGT+TGG - chr5_3:24235716-24235735 None:intergenic 50.0%
!! CAAGTGGGCTGGATAGGAAA+TGG + chr5_3:24235717-24235736 Msa0806260:intron 50.0%
CGGATCCTCCTGTAACAAAC+TGG - chr5_3:24235762-24235781 None:intergenic 50.0%
AATGCGCGTGAGAGTGATTG+GGG + chr5_3:24236394-24236413 Msa0806260:five_prime_UTR 50.0%
TGCGCGAGACACTATGGTAA+AGG + chr5_3:24237572-24237591 Msa0806260:CDS 50.0%
CATGATATCGGAAGCTGCAG+TGG + chr5_3:24238190-24238209 Msa0806260:three_prime_UTR 50.0%
GGAGATTGATGCTCTTGCAG+AGG + chr5_3:24238211-24238230 Msa0806260:three_prime_UTR 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr5_3:24240306-24240325 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr5_3:24240306-24240325 None:intergenic 50.0%
TACCTCTAACGGAGGAGTGG+TGG - chr5_3:24231403-24231422 None:intergenic 55.0%
! CAATAGTGTTGGGCGCAAGG+AGG - chr5_3:24233860-24233879 None:intergenic 55.0%
CTCCTTGCGCCCAACACTAT+TGG + chr5_3:24233858-24233877 Msa0806260:intron 55.0%
CGCACCAAGCCCAATAGTGT+TGG - chr5_3:24233871-24233890 None:intergenic 55.0%
AAACGCGATGCAGCGCTACA+AGG + chr5_3:24234006-24234025 Msa0806260:intron 55.0%
CGAGTGAAGCGGCCGATATT+CGG + chr5_3:24234047-24234066 Msa0806260:intron 55.0%
!! AATCGTACAATCGGTGCCGC+TGG + chr5_3:24234137-24234156 Msa0806260:intron 55.0%
!! TACAATCGGTGCCGCTGGAT+CGG + chr5_3:24234142-24234161 Msa0806260:intron 55.0%
!! GGAGGAGAATTTTGGAGGGG+AGG - chr5_3:24234696-24234715 None:intergenic 55.0%
GAGGGGGAAAGAACTGTGTG+AGG - chr5_3:24235160-24235179 None:intergenic 55.0%
AAGTAACCCGGGCATGACCA+TGG - chr5_3:24235520-24235539 None:intergenic 55.0%
CTCTTCCTCTGGTCATAGGC+TGG + chr5_3:24235559-24235578 Msa0806260:intron 55.0%
TCTGTCCAGCCTATGACCAG+AGG - chr5_3:24235567-24235586 None:intergenic 55.0%
ACAGGAGGATCCGGGCATTT+AGG + chr5_3:24235769-24235788 Msa0806260:intron 55.0%
CAGGAGGATCCGGGCATTTA+GGG + chr5_3:24235770-24235789 Msa0806260:intron 55.0%
GATCCGGGCATTTAGGGAGA+GGG + chr5_3:24235776-24235795 Msa0806260:intron 55.0%
ATCCGGGCATTTAGGGAGAG+GGG + chr5_3:24235777-24235796 Msa0806260:intron 55.0%
ATCCCCTCTCCCTAAATGCC+CGG - chr5_3:24235782-24235801 None:intergenic 55.0%
CACTGATGCATCTAGCGGTG+CGG - chr5_3:24238146-24238165 None:intergenic 55.0%
TTCGCATCAAGGGCCATCGA+GGG - chr5_3:24239981-24240000 None:intergenic 55.0%
TTTCGCATCAAGGGCCATCG+AGG - chr5_3:24239982-24240001 None:intergenic 55.0%
TTCGCATCAAGGGCCATCGA+GGG - chr5_3:24239981-24240000 None:intergenic 55.0%
TTTCGCATCAAGGGCCATCG+AGG - chr5_3:24239982-24240001 None:intergenic 55.0%
CACCACCACTCCTCCGTTAG+AGG + chr5_3:24231398-24231417 Msa0806260:five_prime_UTR 60.0%
! GCCCAATAGTGTTGGGCGCA+AGG - chr5_3:24233863-24233882 None:intergenic 60.0%
GCGCCCAACACTATTGGGCT+TGG + chr5_3:24233864-24233883 Msa0806260:intron 60.0%
GTGAAGCGGCCGATATTCGG+TGG + chr5_3:24234050-24234069 Msa0806260:intron 60.0%
CACCCCGCTCCACCGAATAT+CGG - chr5_3:24234062-24234081 None:intergenic 60.0%
TGGAGCGGGGTGGCCAAAAT+CGG + chr5_3:24234070-24234089 Msa0806260:intron 60.0%
! CGGCCGCTTAGACCCGATTT+TGG - chr5_3:24234086-24234105 None:intergenic 60.0%
! CGTAGCAGGCGCTATTTCGG+CGG - chr5_3:24234357-24234376 None:intergenic 60.0%
GCGCGTAGCAGGCGCTATTT+CGG - chr5_3:24234360-24234379 None:intergenic 60.0%
GATGGAAGGTCTTGGAGGGG+AGG + chr5_3:24234497-24234516 Msa0806260:intron 60.0%
!! CTTGGAGGGGAGGCGTCATT+AGG + chr5_3:24234507-24234526 Msa0806260:intron 60.0%
!! GCCCAACAAGTGGGCTGGAT+AGG + chr5_3:24235711-24235730 Msa0806260:intron 60.0%
GGATCCGGGCATTTAGGGAG+AGG + chr5_3:24235775-24235794 Msa0806260:intron 60.0%
GGGCATTTAGGGAGAGGGGA+TGG + chr5_3:24235781-24235800 Msa0806260:intron 60.0%
GGGAGAGGGGATGGAGAGAA+AGG + chr5_3:24235790-24235809 Msa0806260:intron 60.0%
TCTAGCGGTGCGGATGCAAG+TGG - chr5_3:24238136-24238155 None:intergenic 60.0%
CGCGATGCAGCGCTACAAGG+CGG + chr5_3:24234009-24234028 Msa0806260:intron 65.0%
TGCAGCGCTACAAGGCGGAG+CGG + chr5_3:24234014-24234033 Msa0806260:intron 65.0%
! GCGGCCGATATTCGGTGGAG+CGG + chr5_3:24234055-24234074 Msa0806260:intron 65.0%
! CGGCCGATATTCGGTGGAGC+GGG + chr5_3:24234056-24234075 Msa0806260:intron 65.0%
! GGCCGATATTCGGTGGAGCG+GGG + chr5_3:24234057-24234076 Msa0806260:intron 65.0%
! CGATATTCGGTGGAGCGGGG+TGG + chr5_3:24234060-24234079 Msa0806260:intron 65.0%
GGAGCGGGGTGGCCAAAATC+GGG + chr5_3:24234071-24234090 Msa0806260:intron 65.0%
CTGAAATGCAGCACGGCGCG+TGG - chr5_3:24234382-24234401 None:intergenic 65.0%
!! TGTTGGGCGTCGGCCCAAAC+TGG - chr5_3:24235699-24235718 None:intergenic 65.0%
TTGGGCCGACGCCCAACAAG+TGG + chr5_3:24235701-24235720 Msa0806260:intron 65.0%
TGGGCCGACGCCCAACAAGT+GGG + chr5_3:24235702-24235721 Msa0806260:intron 65.0%
! CCAGCCCACTTGTTGGGCGT+CGG - chr5_3:24235709-24235728 None:intergenic 65.0%
!! GCCATCTGGGAGCATCCCTC+TGG + chr5_3:24236755-24236774 Msa0806260:five_prime_UTR 65.0%
GCCAGAGGGATGCTCCCAGA+TGG - chr5_3:24236759-24236778 None:intergenic 65.0%
!! GGCCGCTACCGGTGCTATCG+CGG + chr5_3:24233966-24233985 Msa0806260:intron 70.0%
!! CGCCGCGATAGCACCGGTAG+CGG - chr5_3:24233971-24233990 None:intergenic 70.0%
!! CTACCGGTGCTATCGCGGCG+CGG + chr5_3:24233971-24233990 Msa0806260:intron 70.0%
GCGCTACAAGGCGGAGCGGT+TGG + chr5_3:24234018-24234037 Msa0806260:intron 70.0%
CCGACGCCCAACAAGTGGGC+TGG + chr5_3:24235706-24235725 Msa0806260:intron 70.0%
AGGCCGCGCCGCGATAGCAC+CGG - chr5_3:24233977-24233996 None:intergenic 75.0%
! CACGGCGCGTGGCGCGTAGC+AGG - chr5_3:24234371-24234390 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 24231201 24243296 24231201 ID=Msa0806260;Name=Msa0806260
chr5_3 mRNA 24231201 24243296 24231201 ID=Msa0806260-mRNA-1;Parent=Msa0806260;Name=Msa0806260-mRNA-1;_AED=0.17;_eAED=0.17;_QI=1063|1|1|1|0.53|0.35|14|639|164
chr5_3 exon 24231201 24231261 24231201 ID=Msa0806260-mRNA-1:exon:9351;Parent=Msa0806260-mRNA-1
chr5_3 exon 24231282 24231419 24231282 ID=Msa0806260-mRNA-1:exon:9352;Parent=Msa0806260-mRNA-1
chr5_3 exon 24231617 24231698 24231617 ID=Msa0806260-mRNA-1:exon:9353;Parent=Msa0806260-mRNA-1
chr5_3 exon 24232163 24232307 24232163 ID=Msa0806260-mRNA-1:exon:9354;Parent=Msa0806260-mRNA-1
chr5_3 exon 24232420 24232577 24232420 ID=Msa0806260-mRNA-1:exon:9355;Parent=Msa0806260-mRNA-1
chr5_3 exon 24236377 24236642 24236377 ID=Msa0806260-mRNA-1:exon:9356;Parent=Msa0806260-mRNA-1
chr5_3 exon 24236720 24236938 24236720 ID=Msa0806260-mRNA-1:exon:9357;Parent=Msa0806260-mRNA-1
chr5_3 exon 24237061 24237169 24237061 ID=Msa0806260-mRNA-1:exon:9358;Parent=Msa0806260-mRNA-1
chr5_3 exon 24237257 24237372 24237257 ID=Msa0806260-mRNA-1:exon:9359;Parent=Msa0806260-mRNA-1
chr5_3 exon 24237495 24237593 24237495 ID=Msa0806260-mRNA-1:exon:9360;Parent=Msa0806260-mRNA-1
chr5_3 exon 24237902 24238011 24237902 ID=Msa0806260-mRNA-1:exon:9361;Parent=Msa0806260-mRNA-1
chr5_3 exon 24238122 24238232 24238122 ID=Msa0806260-mRNA-1:exon:9362;Parent=Msa0806260-mRNA-1
chr5_3 exon 24238458 24238777 24238458 ID=Msa0806260-mRNA-1:exon:9363;Parent=Msa0806260-mRNA-1
chr5_3 exon 24243034 24243296 24243034 ID=Msa0806260-mRNA-1:exon:9364;Parent=Msa0806260-mRNA-1
chr5_3 five_prime_UTR 24231201 24231261 24231201 ID=Msa0806260-mRNA-1:five_prime_utr;Parent=Msa0806260-mRNA-1
chr5_3 five_prime_UTR 24231282 24231419 24231282 ID=Msa0806260-mRNA-1:five_prime_utr;Parent=Msa0806260-mRNA-1
chr5_3 five_prime_UTR 24231617 24231698 24231617 ID=Msa0806260-mRNA-1:five_prime_utr;Parent=Msa0806260-mRNA-1
chr5_3 five_prime_UTR 24232163 24232307 24232163 ID=Msa0806260-mRNA-1:five_prime_utr;Parent=Msa0806260-mRNA-1
chr5_3 five_prime_UTR 24232420 24232577 24232420 ID=Msa0806260-mRNA-1:five_prime_utr;Parent=Msa0806260-mRNA-1
chr5_3 five_prime_UTR 24236377 24236642 24236377 ID=Msa0806260-mRNA-1:five_prime_utr;Parent=Msa0806260-mRNA-1
chr5_3 five_prime_UTR 24236720 24236932 24236720 ID=Msa0806260-mRNA-1:five_prime_utr;Parent=Msa0806260-mRNA-1
chr5_3 CDS 24236933 24236938 24236933 ID=Msa0806260-mRNA-1:cds;Parent=Msa0806260-mRNA-1
chr5_3 CDS 24237061 24237169 24237061 ID=Msa0806260-mRNA-1:cds;Parent=Msa0806260-mRNA-1
chr5_3 CDS 24237257 24237372 24237257 ID=Msa0806260-mRNA-1:cds;Parent=Msa0806260-mRNA-1
chr5_3 CDS 24237495 24237593 24237495 ID=Msa0806260-mRNA-1:cds;Parent=Msa0806260-mRNA-1
chr5_3 CDS 24237902 24238011 24237902 ID=Msa0806260-mRNA-1:cds;Parent=Msa0806260-mRNA-1
chr5_3 CDS 24238122 24238176 24238122 ID=Msa0806260-mRNA-1:cds;Parent=Msa0806260-mRNA-1
chr5_3 three_prime_UTR 24238177 24238232 24238177 ID=Msa0806260-mRNA-1:three_prime_utr;Parent=Msa0806260-mRNA-1
chr5_3 three_prime_UTR 24238458 24238777 24238458 ID=Msa0806260-mRNA-1:three_prime_utr;Parent=Msa0806260-mRNA-1
chr5_3 three_prime_UTR 24243034 24243296 24243034 ID=Msa0806260-mRNA-1:three_prime_utr;Parent=Msa0806260-mRNA-1
Gene Sequence

>Msa0806260

ATGAAGGGAACTGTTGTGGAAGGCACCATACAGAAGTTGTTTGAAGGCCACCATATGAACTATATTGAATGCATGAATGTGGATTATAAATCAACAAGAAAAGAATCATTTTATGATCTTCAGCTTGATGTCAAAGGCTGTACAGATGTGTATGCTTCTTTTGATAAGTATGTGGAAGTAGAACAGCTTGAGGGTGATAACAAGTATCATGCAGAGCAGTATGGTTTACAGGAAGCAAGAAAGGGTGTATTGTTCATTGATTTTCCACCTGTTCTTCAGCTTCAGTTAAAACGGTTTGAGTATGATTTTGCGCGAGACACTATGGTAAAGATCAATGACCGCTATGAGTTCCCCTTACAATTAGATCTTGATAGGGATAATGGGAAGTATCTATCTCCTAACGCAGATAGAAGTATTCGCAACCTTTATACACTTCACAGTTGTTACAGAACCACTTGCATCCGCACCGCTAGATGCATCAGTGTCAAGTTTTGA
Protein sequence

>Msa0806260

MKGTVVEGTIQKLFEGHHMNYIECMNVDYKSTRKESFYDLQLDVKGCTDVYASFDKYVEVEQLEGDNKYHAEQYGLQEARKGVLFIDFPPVLQLQLKRFEYDFARDTMVKINDRYEFPLQLDLDRDNGKYLSPNADRSIRNLYTLHSCYRTTCIRTARCISVKF*