AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0806270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0806270 MtrunA17_Chr1g0170261 97.973 148 3 0 1 148 299 446 2.95e-98 306
Msa0806270 MtrunA17_Chr5g0439971 92.568 148 11 0 1 148 302 449 1.62e-93 293
Msa0806270 MtrunA17_Chr3g0119031 92.568 148 11 0 1 148 297 444 2.68e-93 292
Msa0806270 MtrunA17_Chr3g0138791 34.746 118 73 2 10 123 213 330 1.32e-12 64.7
Msa0806270 MtrunA17_Chr1g0148321 33.051 118 75 2 10 123 213 330 1.20e-11 62.0
Msa0806270 MtrunA17_Chr5g0427301 31.061 132 81 4 14 143 666 789 2.08e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0806270 AT5G06600.3 89.189 148 16 0 1 148 297 444 4.16e-91 285
Msa0806270 AT5G06600.2 89.189 148 16 0 1 148 296 443 2.00e-90 285
Msa0806270 AT5G06600.1 89.189 148 16 0 1 148 297 444 2.13e-90 285
Msa0806270 AT3G11910.3 89.189 148 16 0 1 148 296 443 5.50e-90 284
Msa0806270 AT3G11910.1 89.189 148 16 0 1 148 296 443 5.50e-90 284
Msa0806270 AT3G11910.4 89.189 148 16 0 1 148 295 442 5.68e-90 284
Msa0806270 AT3G11910.2 89.189 148 16 0 1 148 295 442 5.68e-90 284
Msa0806270 AT3G49600.3 32.000 125 81 2 3 123 204 328 1.54e-12 65.1
Msa0806270 AT3G49600.2 32.000 125 81 2 3 123 204 328 1.54e-12 65.1
Msa0806270 AT3G49600.1 32.000 125 81 2 3 123 204 328 1.54e-12 65.1
Msa0806270 AT2G22310.2 28.455 123 87 1 10 131 130 252 8.79e-11 59.3
Msa0806270 AT2G22310.3 28.455 123 87 1 10 131 135 257 9.82e-11 59.3

Find 120 sgRNAs with CRISPR-Local

Find 765 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATCATTTCAATATTCTT+TGG 0.266276 5_3:-24283305 None:intergenic
TCACTATTGGTGGCTATAAA+TGG 0.267592 5_3:+24276918 Msa0806270:five_prime_UTR
AAAGAGTTAACCAAATCTTT+TGG 0.276067 5_3:+24281486 Msa0806270:five_prime_UTR
CCTTACAATTAGATCTTGAT+AGG 0.285562 5_3:+24282579 Msa0806270:CDS
TGACTAACCTTTCTGAAATA+AGG 0.285682 5_3:-24281283 None:intergenic
GCAACCACTTCTGTTTATAT+CGG 0.291404 5_3:+24283271 Msa0806270:three_prime_UTR
ATGATGTCTAAGAACTTAAC+AGG 0.300249 5_3:+24281538 Msa0806270:five_prime_UTR
GAATTCTGAAGACATAAATA+AGG 0.300558 5_3:+24287764 Msa0806270:three_prime_UTR
AAGAAGGGGAAGATGGGTTT+TGG 0.304871 5_3:-24275877 None:intergenic
AGACATAAATAAGGGTAATA+TGG 0.305906 5_3:+24287773 Msa0806270:three_prime_UTR
TTAGATCTTGATAGGGATAA+TGG 0.306686 5_3:+24282587 Msa0806270:CDS
CACCACCACTCCTCCGTTAG+AGG 0.318183 5_3:+24276030 Msa0806270:five_prime_UTR
CCATATGTACATATTTCTAT+TGG 0.319865 5_3:+24287731 Msa0806270:three_prime_UTR
TGCAGAGCAGTATGGTTTAC+AGG 0.343261 5_3:+24282006 Msa0806270:CDS
TCTGATGCTGTTGTTGTTGA+AGG 0.347454 5_3:+24276291 Msa0806270:five_prime_UTR
AATACCTGTGAAGTGTATAA+AGG 0.350377 5_3:-24282649 None:intergenic
CAGCTTAACTGTGGTCAATC+AGG 0.357604 5_3:+24277160 Msa0806270:five_prime_UTR
GATGAATGCAAAATATTAGA+TGG 0.360835 5_3:-24283217 None:intergenic
TGCATTCAATATAGTTCATA+TGG 0.361714 5_3:-24281760 None:intergenic
TGTATCCCATCCAAAAGATT+TGG 0.366228 5_3:-24281496 None:intergenic
ATCTTATATATTAGTTAAGA+TGG 0.371000 5_3:+24283385 Msa0806270:three_prime_UTR
GATGCAGGTTCGATGCCTTA+TGG 0.373749 5_3:+24277116 Msa0806270:five_prime_UTR
GATGAAGCGAGCGAAGAAAC+TGG 0.382439 5_3:-24275986 None:intergenic
GTAAAGCTTGTGCACTTCAT+AGG 0.391326 5_3:+24283175 Msa0806270:three_prime_UTR
TTAATGCGCGTGAGAGTGAT+TGG 0.411208 5_3:+24281047 Msa0806270:five_prime_UTR
CAACCACTTCTGTTTATATC+GGG 0.418388 5_3:+24283272 Msa0806270:three_prime_UTR
ACAACAACAGCATCAGAGTT+AGG 0.423777 5_3:-24276285 None:intergenic
CCAATAGAAATATGTACATA+TGG 0.426098 5_3:-24287731 None:intergenic
CCTATCAAGATCTAATTGTA+AGG 0.427249 5_3:-24282579 None:intergenic
CGAATACTTCTATCTGCGTT+AGG 0.429494 5_3:-24282623 None:intergenic
ACATCGGAATAATGTTTCTT+CGG 0.432526 5_3:-24276893 None:intergenic
TAGATCTTGATAGGGATAAT+GGG 0.437845 5_3:+24282588 Msa0806270:CDS
CTCCTAACTGAACATGATAT+CGG 0.438360 5_3:+24282831 Msa0806270:three_prime_UTR
GCAGTTGAAGATCCGCCAAT+TGG 0.442781 5_3:+24276833 Msa0806270:five_prime_UTR
TTCCGATATCATGTTCAGTT+AGG 0.442966 5_3:-24282833 None:intergenic
TTCTTCAGCTTCAGTTAAAA+CGG 0.445451 5_3:+24282190 Msa0806270:CDS
TTAAGATGGATGGTAAGTTA+TGG 0.451746 5_3:+24283399 Msa0806270:three_prime_UTR
AAGTATCATGCAGAGCAGTA+TGG 0.452897 5_3:+24281998 Msa0806270:CDS
TAATGCGCGTGAGAGTGATT+GGG 0.455780 5_3:+24281048 Msa0806270:five_prime_UTR
TATATAGATGTTACAGATGC+AGG 0.456399 5_3:+24277101 Msa0806270:five_prime_UTR
ACTGAAAATGATATGCCATC+TGG 0.457124 5_3:+24281396 Msa0806270:five_prime_UTR
GCCATCTGGGAGCATCCCTC+TGG 0.463909 5_3:+24281410 Msa0806270:five_prime_UTR
TGTTCAGCATTGTTCCCCTT+CGG 0.468250 5_3:-24277068 None:intergenic
AGTAAATATTCCGTCAGAAA+AGG 0.469439 5_3:+24277188 Msa0806270:five_prime_UTR
TTTAACTGAAGCTGAAGAAC+AGG 0.471336 5_3:-24282186 None:intergenic
ATAAGCGAAGAAGGGGAAGA+TGG 0.472328 5_3:-24275884 None:intergenic
GTCCATGTGAATCTCCCAAT+TGG 0.481266 5_3:-24276848 None:intergenic
CAGTTGAAGATCCGCCAATT+GGG 0.486788 5_3:+24276834 Msa0806270:five_prime_UTR
TCACATTCCTTATTTCAGAA+AGG 0.489887 5_3:+24281276 Msa0806270:five_prime_UTR
TCATGTAACAAGTAGCTCCT+TGG 0.493061 5_3:-24281231 None:intergenic
TAAGCGAAGAAGGGGAAGAT+GGG 0.495142 5_3:-24275883 None:intergenic
GCATTACCTTCCATAGGTTG+AGG 0.497016 5_3:-24276315 None:intergenic
TGTTGAAGGTCCTCAACCTA+TGG 0.497121 5_3:+24276305 Msa0806270:five_prime_UTR
TATCTTACATGTGGCGATGT+AGG 0.501672 5_3:+24283120 Msa0806270:three_prime_UTR
AGTTGCGTTTACTACGGAAA+AGG 0.504159 5_3:-24275832 None:intergenic
TGCGCGAGACACTATGGTAA+AGG 0.504586 5_3:+24282227 Msa0806270:CDS
GCCTTCAAACAACTTCTGTA+TGG 0.514735 5_3:-24281735 None:intergenic
CAGGTTCGATGCCTTATGGT+TGG 0.516574 5_3:+24277120 Msa0806270:five_prime_UTR
AGCATCAGTTGCGTTTACTA+CGG 0.521612 5_3:-24275838 None:intergenic
ATGAAGCGAGCGAAGAAACT+GGG 0.526969 5_3:-24275985 None:intergenic
TATATATTAGTTAAGATGGA+TGG 0.538285 5_3:+24283389 Msa0806270:three_prime_UTR
GCAACCTTTATACACTTCAC+AGG 0.539923 5_3:+24282645 Msa0806270:CDS
ACCATACAGAAGTTGTTTGA+AGG 0.540530 5_3:+24281734 Msa0806270:CDS
AATTCTGAAGACATAAATAA+GGG 0.540626 5_3:+24287765 Msa0806270:three_prime_UTR
GCAAATCTAGTCCAACCATA+AGG 0.541036 5_3:-24277131 None:intergenic
CTTACAATTAGATCTTGATA+GGG 0.543468 5_3:+24282580 Msa0806270:CDS
CTGAAAATGATATGCCATCT+GGG 0.544979 5_3:+24281397 Msa0806270:five_prime_UTR
GGGGTTTGCGAATGATGAAA+GGG 0.545894 5_3:-24275965 None:intergenic
CATGATATCGGAAGCTGCAG+TGG 0.546090 5_3:+24282843 Msa0806270:three_prime_UTR
CTATCAAGATCTAATTGTAA+GGG 0.549176 5_3:-24282578 None:intergenic
TCGCCACATGTAAGATAGAC+AGG 0.550072 5_3:-24283114 None:intergenic
AACAAACTCTGTAATGCCAG+AGG 0.550134 5_3:-24281426 None:intergenic
TGGGGTTTGCGAATGATGAA+AGG 0.558121 5_3:-24275966 None:intergenic
GTGGAAGTAGAACAGCTTGA+GGG 0.565647 5_3:+24281968 Msa0806270:CDS
GATCTTCAGCTTGATGTCAA+AGG 0.567722 5_3:+24281911 Msa0806270:intron
CACATTGCATTACCTTCCAT+AGG 0.574604 5_3:-24276321 None:intergenic
AACTGAAGCTGAAGAACAGG+TGG 0.576147 5_3:-24282183 None:intergenic
TTTCAGGGAACTGTTGTGGA+AGG 0.577078 5_3:+24281710 Msa0806270:intron
CGCCAATTGGGAGATTCACA+TGG 0.581165 5_3:+24276846 Msa0806270:five_prime_UTR
AATGCGCGTGAGAGTGATTG+GGG 0.581175 5_3:+24281049 Msa0806270:five_prime_UTR
TTTCAGAACAAATTAAGATG+GGG 0.584112 5_3:-24283350 None:intergenic
TCCACAACATAGCCTCTACT+AGG 0.596783 5_3:-24281109 None:intergenic
TTTCCCGATATAAACAGAAG+TGG 0.597045 5_3:-24283275 None:intergenic
GCGGATACTGATCTTTCCGA+AGG 0.601985 5_3:+24277052 Msa0806270:five_prime_UTR
CACAAGTACAGTGGATGCTG+TGG 0.605419 5_3:+24276811 Msa0806270:five_prime_UTR
AAAGCTAGAAGACAAAATGA+AGG 0.607281 5_3:+24281572 Msa0806270:exon
CGGATACTGATCTTTCCGAA+GGG 0.607412 5_3:+24277053 Msa0806270:five_prime_UTR
CATGTGAATCTCCCAATTGG+CGG 0.608755 5_3:-24276845 None:intergenic
TGTGGAAGTAGAACAGCTTG+AGG 0.609687 5_3:+24281967 Msa0806270:CDS
TACCTCTAACGGAGGAGTGG+TGG 0.610470 5_3:-24276032 None:intergenic
TATCAAGATCTAATTGTAAG+GGG 0.610556 5_3:-24282577 None:intergenic
GCCAGAGGGATGCTCCCAGA+TGG 0.612314 5_3:-24281411 None:intergenic
GGATCATACAATTCAGCAAG+AGG 0.617299 5_3:-24281088 None:intergenic
ACGCGATTGATTACCTCTAA+CGG 0.618741 5_3:-24276043 None:intergenic
AGTATATGCATCAGAAACAC+AGG 0.622310 5_3:-24287854 None:intergenic
ACAAACTCTGTAATGCCAGA+GGG 0.625922 5_3:-24281425 None:intergenic
TCCTAGTAGAGGCTATGTTG+TGG 0.625984 5_3:+24281108 Msa0806270:five_prime_UTR
GAAGGTCCTCAACCTATGGA+AGG 0.631259 5_3:+24276309 Msa0806270:five_prime_UTR
TCTAGCGGTGCGGATGCAAG+TGG 0.635527 5_3:-24282786 None:intergenic
TGCACAGTTCAGCTTAACTG+TGG 0.636127 5_3:+24277151 Msa0806270:five_prime_UTR
AGGAGTGGTGGTGATAGTCA+TGG 0.638641 5_3:-24276020 None:intergenic
TGTAGGCTTTGAAGAGACGT+TGG 0.640799 5_3:+24283137 Msa0806270:three_prime_UTR
GAATTGTATGATCCTAGTAG+AGG 0.640831 5_3:+24281097 Msa0806270:five_prime_UTR
GATTACCTCTAACGGAGGAG+TGG 0.641206 5_3:-24276035 None:intergenic
GTAGCAACAGAATCTTGAAG+TGG 0.641625 5_3:+24276245 Msa0806270:intron
CTATATTGAATGCATGAATG+TGG 0.644705 5_3:+24281769 Msa0806270:CDS
ATTCAATATAGTTCATATGG+TGG 0.646922 5_3:-24281757 None:intergenic
GGAGATTGATGCTCTTGCAG+AGG 0.647925 5_3:+24282864 Msa0806270:three_prime_UTR
AGCAGAAAACACAAGTACAG+TGG 0.653432 5_3:+24276802 Msa0806270:five_prime_UTR
CGATTGATTACCTCTAACGG+AGG 0.662494 5_3:-24276040 None:intergenic
ATACCTGTCTATCTTACATG+TGG 0.666277 5_3:+24283111 Msa0806270:three_prime_UTR
CACTGATGCATCTAGCGGTG+CGG 0.684294 5_3:-24282796 None:intergenic
GCCACCAATAGTGAAAACAT+CGG 0.685681 5_3:-24276909 None:intergenic
TGAAGCGAGCGAAGAAACTG+GGG 0.693799 5_3:-24275984 None:intergenic
ATTGTAAGGGGAACTCATAG+CGG 0.696550 5_3:-24282565 None:intergenic
AAATCAAAAGAAGAGAACAA+TGG 0.698409 5_3:-24287904 None:intergenic
CTTGACACTGATGCATCTAG+CGG 0.700615 5_3:-24282801 None:intergenic
GGATACTGATCTTTCCGAAG+GGG 0.700894 5_3:+24277054 Msa0806270:five_prime_UTR
TGATGTCTAAGAACTTAACA+GGG 0.721619 5_3:+24281539 Msa0806270:five_prime_UTR
GGAAGACAGATGCATACTTG+AGG 0.749512 5_3:+24281129 Msa0806270:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTAAAAAATAATA+AGG + chr5_3:24282711-24282730 Msa0806270:intron 0.0%
!! TAAATATTGAATATTATACA+TGG - chr5_3:24276973-24276992 None:intergenic 10.0%
!! ATTTATATTCAAAACTATTA+AGG + chr5_3:24277588-24277607 Msa0806270:intron 10.0%
!! TATGAACTAAATAAAAATTT+GGG + chr5_3:24278209-24278228 Msa0806270:intron 10.0%
!!! TTTAGTATTAAATTTTTTTG+TGG + chr5_3:24278962-24278981 Msa0806270:intron 10.0%
!! TTAATAATACAATTTATTTC+TGG + chr5_3:24280589-24280608 Msa0806270:intron 10.0%
!!! GTTAAAATAAAAAGTATAAA+TGG - chr5_3:24282307-24282326 None:intergenic 10.0%
!!! TATTAAACTAAAATCATTTT+CGG - chr5_3:24285055-24285074 None:intergenic 10.0%
!!! TATTAAACTAAAATCATTTT+CGG - chr5_3:24285055-24285074 None:intergenic 10.0%
!!! AGTGTCAATTTAATTTTTTT+AGG + chr5_3:24276703-24276722 Msa0806270:intron 15.0%
!!! GTGTCAATTTAATTTTTTTA+GGG + chr5_3:24276704-24276723 Msa0806270:intron 15.0%
!! TGTAAAAATTAAGAAATGAA+GGG + chr5_3:24277338-24277357 Msa0806270:intron 15.0%
!!! CTTTTGAAATTGATTTATTA+TGG + chr5_3:24277415-24277434 Msa0806270:intron 15.0%
!!! GTTTTGAATATAAATTTTCT+TGG - chr5_3:24277583-24277602 None:intergenic 15.0%
!! AAGAAATAAATCATACAATA+AGG + chr5_3:24278101-24278120 Msa0806270:intron 15.0%
!! GTATGAACTAAATAAAAATT+TGG + chr5_3:24278208-24278227 Msa0806270:intron 15.0%
!!! CTTTTTTCTCTTATATATTA+CGG + chr5_3:24279171-24279190 Msa0806270:intron 15.0%
!! ACATTTACAAAAAAATTGTT+TGG - chr5_3:24279432-24279451 None:intergenic 15.0%
!! TTAGTACAATAAAAATACAT+AGG + chr5_3:24279992-24280011 Msa0806270:intron 15.0%
!!! CAATAATAAATATCCATTTT+GGG + chr5_3:24282331-24282350 Msa0806270:intron 15.0%
!!! CTTTGTTGATTTTAAATATA+AGG + chr5_3:24282682-24282701 Msa0806270:intron 15.0%
!! ATCTTATATATTAGTTAAGA+TGG + chr5_3:24283385-24283404 Msa0806270:three_prime_UTR 15.0%
!! ATACAGTAAAATGAAATTAT+TGG + chr5_3:24283733-24283752 Msa0806270:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24284070-24284089 Msa0806270:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24284070-24284089 Msa0806270:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24284070-24284089 Msa0806270:intron 15.0%
!!! TACAAAATTTAAAACCAAAT+AGG - chr5_3:24284527-24284546 None:intergenic 15.0%
!! TACAAGTTTGATAAATATAA+AGG + chr5_3:24284603-24284622 Msa0806270:intron 15.0%
!!! AACCTATTTTGTTTTAAATT+TGG + chr5_3:24284814-24284833 Msa0806270:intron 15.0%
!!! TACCAAATTTAAAACAAAAT+AGG - chr5_3:24284819-24284838 None:intergenic 15.0%
!! TTGATTAGAAATTTGAAAAA+TGG + chr5_3:24285234-24285253 Msa0806270:intron 15.0%
!! TGATTAGAAATTTGAAAAAT+GGG + chr5_3:24285235-24285254 Msa0806270:intron 15.0%
!!! ATTTAGTAAAATGAAAGTAT+TGG + chr5_3:24285838-24285857 Msa0806270:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24284070-24284089 Msa0806270:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24284070-24284089 Msa0806270:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24284070-24284089 Msa0806270:intron 15.0%
!! ATATGATATATGAAACTATT+TGG + chr5_3:24284070-24284089 Msa0806270:intron 15.0%
!!! TACAAAATTTAAAACCAAAT+AGG - chr5_3:24284527-24284546 None:intergenic 15.0%
!! TACAAGTTTGATAAATATAA+AGG + chr5_3:24284603-24284622 Msa0806270:intron 15.0%
!!! TACCAAATTTAAAACAAAAT+AGG - chr5_3:24284819-24284838 None:intergenic 15.0%
!! TTGATTAGAAATTTGAAAAA+TGG + chr5_3:24285234-24285253 Msa0806270:intron 15.0%
!! TGATTAGAAATTTGAAAAAT+GGG + chr5_3:24285235-24285254 Msa0806270:intron 15.0%
!!! GAATTTTTGTGATTTTTTTG+TGG + chr5_3:24276212-24276231 Msa0806270:intron 20.0%
!!! TTTCTTTTGAATTCATGTTA+TGG + chr5_3:24276425-24276444 Msa0806270:intron 20.0%
!!! TTTTGTTATTGGAAATGTTA+GGG + chr5_3:24276448-24276467 Msa0806270:intron 20.0%
!!! ATTCTTTTGAATTCTTGTTA+TGG + chr5_3:24276551-24276570 Msa0806270:intron 20.0%
!! TTGATTATGTTGTATTTAAG+TGG + chr5_3:24277249-24277268 Msa0806270:intron 20.0%
!! GTGTAAAAATTAAGAAATGA+AGG + chr5_3:24277337-24277356 Msa0806270:intron 20.0%
!! TTATGTTATGTTGAAATACT+AGG + chr5_3:24277445-24277464 Msa0806270:intron 20.0%
!! AGATCATCAAAAATCTTATT+TGG + chr5_3:24277808-24277827 Msa0806270:intron 20.0%
!!! TATTTATTTAAACCGTTTTG+CGG - chr5_3:24277847-24277866 None:intergenic 20.0%
!! GAGAAAAAAGAAAAAAATAG+AGG + chr5_3:24278133-24278152 Msa0806270:intron 20.0%
!!! CATAAAAAGTACATTAAGAT+TGG + chr5_3:24278238-24278257 Msa0806270:intron 20.0%
!!! AGGAATTATCAATTTTTTAG+CGG - chr5_3:24278268-24278287 None:intergenic 20.0%
!!! AAAAGGTTTTAAGTGAATAT+CGG - chr5_3:24278741-24278760 None:intergenic 20.0%
!! TAAATTCCTATACAATATAG+CGG + chr5_3:24279062-24279081 Msa0806270:intron 20.0%
!! ATTGGATATTTAATAACACT+CGG + chr5_3:24279099-24279118 Msa0806270:intron 20.0%
!! ATATATAAGAGAAAAAAGCA+AGG - chr5_3:24279169-24279188 None:intergenic 20.0%
!! TTAGATTGTATCATTGTAAT+TGG + chr5_3:24279587-24279606 Msa0806270:intron 20.0%
!! GAAATTCAGTAAAGAAAAAA+TGG - chr5_3:24280848-24280867 None:intergenic 20.0%
!!! TTTAATTTTTTTCCGAAAGA+AGG + chr5_3:24281321-24281340 Msa0806270:intron 20.0%
!! ATGTTTAATATTGTTTGTTC+AGG + chr5_3:24281353-24281372 Msa0806270:intron 20.0%
!!! ACAAGAAAAGAATCATTTTA+TGG + chr5_3:24281803-24281822 Msa0806270:CDS 20.0%
!!! ATTTTATGGTAGGTATTTTT+TGG + chr5_3:24281817-24281836 Msa0806270:intron 20.0%
!! TGAAATAATTGAAATTCAGA+AGG - chr5_3:24281886-24281905 None:intergenic 20.0%
!! AAATATGAAGGAAAAATAGT+AGG - chr5_3:24282085-24282104 None:intergenic 20.0%
!!! TTTTCCTTCATATTTTAGAT+TGG + chr5_3:24282090-24282109 Msa0806270:intron 20.0%
!!! ATAACCAATCTAAAATATGA+AGG - chr5_3:24282097-24282116 None:intergenic 20.0%
!! CCAAAATGGATATTTATTAT+TGG - chr5_3:24282333-24282352 None:intergenic 20.0%
!!! CCAATAATAAATATCCATTT+TGG + chr5_3:24282330-24282349 Msa0806270:intron 20.0%
!! TTAATTCAGTGATTCATAAA+AGG - chr5_3:24283070-24283089 None:intergenic 20.0%
!! TGTATCATTTCAATATTCTT+TGG - chr5_3:24283308-24283327 None:intergenic 20.0%
!!! TTTTCAGAACAAATTAAGAT+GGG - chr5_3:24283354-24283373 None:intergenic 20.0%
!! TATATATTAGTTAAGATGGA+TGG + chr5_3:24283389-24283408 Msa0806270:three_prime_UTR 20.0%
!!! AATTCTGAAGACATAAATAA+GGG + chr5_3:24283508-24283527 Msa0806270:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24284060-24284079 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24284061-24284080 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24284082-24284101 Msa0806270:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24284060-24284079 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24284061-24284080 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24284082-24284101 Msa0806270:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24284060-24284079 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24284061-24284080 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24284082-24284101 Msa0806270:intron 20.0%
!! AACATAATATTGAACCTATT+TGG + chr5_3:24284510-24284529 Msa0806270:intron 20.0%
!! TAGAAGTTTGATAAATATGA+AGG + chr5_3:24284746-24284765 Msa0806270:intron 20.0%
!! TACAAAAATGATAAATGAGA+AGG + chr5_3:24284921-24284940 Msa0806270:intron 20.0%
!!! GAAGGTTTTAAAAGATAAAT+TGG + chr5_3:24285148-24285167 Msa0806270:intron 20.0%
!! ATAGTCTAAATTCAGTAAAT+TGG + chr5_3:24285310-24285329 Msa0806270:intron 20.0%
!! TTTATCAAACTTCAAAACAA+TGG - chr5_3:24285360-24285379 None:intergenic 20.0%
!! TGATACGAAAATTGATATTT+AGG + chr5_3:24285399-24285418 Msa0806270:intron 20.0%
!!! AATTCTGAAGACATAAATAA+GGG + chr5_3:24283508-24283527 Msa0806270:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24284060-24284079 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24284061-24284080 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24284082-24284101 Msa0806270:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24284060-24284079 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24284061-24284080 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24284082-24284101 Msa0806270:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24284060-24284079 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24284061-24284080 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24284082-24284101 Msa0806270:intron 20.0%
!!! TATATCATATTTTGCATCAA+GGG - chr5_3:24284060-24284079 None:intergenic 20.0%
!!! ATATATCATATTTTGCATCA+AGG - chr5_3:24284061-24284080 None:intergenic 20.0%
!!! AAACTATTTGGTTTTGTATT+CGG + chr5_3:24284082-24284101 Msa0806270:intron 20.0%
!! AACATAATATTGAACCTATT+TGG + chr5_3:24284510-24284529 Msa0806270:intron 20.0%
!! TAGAAGTTTGATAAATATGA+AGG + chr5_3:24284746-24284765 Msa0806270:intron 20.0%
!!! GACCTATTTTGTTTTAAATT+TGG + chr5_3:24287060-24287079 Msa0806270:intron 20.0%
!! TACAAAAATGATAAATGAGA+AGG + chr5_3:24284921-24284940 Msa0806270:intron 20.0%
!!! GAAGGTTTTAAAAGATAAAT+TGG + chr5_3:24285148-24285167 Msa0806270:intron 20.0%
!! ATAGTCTAAATTCAGTAAAT+TGG + chr5_3:24285310-24285329 Msa0806270:intron 20.0%
!! TTTATCAAACTTCAAAACAA+TGG - chr5_3:24285360-24285379 None:intergenic 20.0%
!! TGATACGAAAATTGATATTT+AGG + chr5_3:24285399-24285418 Msa0806270:intron 20.0%
!!! AATTCTGAAGACATAAATAA+GGG + chr5_3:24283508-24283527 Msa0806270:intron 20.0%
!!! TTTGTTTGATGATGATTACT+AGG + chr5_3:24276170-24276189 Msa0806270:intron 25.0%
!!! TTGTTTGATGATGATTACTA+GGG + chr5_3:24276171-24276190 Msa0806270:intron 25.0%
!!! TTTTTGGAGAAGAAGTTTAT+TGG + chr5_3:24276352-24276371 Msa0806270:intron 25.0%
!!! TCATGTTATGGTTTTGTTAT+TGG + chr5_3:24276437-24276456 Msa0806270:intron 25.0%
!!! GTTTTGTTATTGGAAATGTT+AGG + chr5_3:24276447-24276466 Msa0806270:intron 25.0%
!!! TTTGTTATTGGAAATGTTAG+GGG + chr5_3:24276449-24276468 Msa0806270:intron 25.0%
!!! TCTTGTTATGGTTTTGTTAT+TGG + chr5_3:24276563-24276582 Msa0806270:intron 25.0%
!! ATTTTTGTCCTTTTCGTATT+TGG + chr5_3:24276769-24276788 Msa0806270:intron 25.0%
! TCAATATTTATGCGTATCAT+AGG + chr5_3:24276983-24277002 Msa0806270:intron 25.0%
! CAATATTTATGCGTATCATA+GGG + chr5_3:24276984-24277003 Msa0806270:intron 25.0%
! AATATTTATGCGTATCATAG+GGG + chr5_3:24276985-24277004 Msa0806270:intron 25.0%
!!! TTATATTGATTTAAACGTGC+AGG + chr5_3:24277030-24277049 Msa0806270:intron 25.0%
! AAATGTTTGAGAACCTTAAT+AGG + chr5_3:24277309-24277328 Msa0806270:intron 25.0%
! TCTATATATATTGCTTTGAC+TGG + chr5_3:24277385-24277404 Msa0806270:intron 25.0%
! TTTCAACATAACATAACCTA+GGG - chr5_3:24277441-24277460 None:intergenic 25.0%
! ATTTCAACATAACATAACCT+AGG - chr5_3:24277442-24277461 None:intergenic 25.0%
! GATAACATTAGAGTAAGTTA+AGG + chr5_3:24277486-24277505 Msa0806270:intron 25.0%
!! AAATCTTATTTGGCAAATAG+TGG + chr5_3:24277818-24277837 Msa0806270:intron 25.0%
! TAGTTCATACAATTTCTCAT+CGG - chr5_3:24278198-24278217 None:intergenic 25.0%
! GTATCATAGCTTATCAATTT+GGG - chr5_3:24278549-24278568 None:intergenic 25.0%
!!! TCACTTAAAACCTTTTTTCA+TGG + chr5_3:24278745-24278764 Msa0806270:intron 25.0%
! AGATTGTTTGTTTAATAGCA+TGG + chr5_3:24278936-24278955 Msa0806270:intron 25.0%
! TTGGATATTTAATAACACTC+GGG + chr5_3:24279100-24279119 Msa0806270:intron 25.0%
! ATACTTCAATCACACTTAAT+TGG - chr5_3:24279266-24279285 None:intergenic 25.0%
!! TAAAAATACTAGGGACTTTT+GGG - chr5_3:24279354-24279373 None:intergenic 25.0%
!! ATTTTATGTGTGAATGTGTA+TGG - chr5_3:24279389-24279408 None:intergenic 25.0%
!!! ATGTTGTTGTAGGTTATTTT+GGG + chr5_3:24279556-24279575 Msa0806270:intron 25.0%
! ATTGTATCATTGTAATTGGA+AGG + chr5_3:24279591-24279610 Msa0806270:intron 25.0%
! AATTGGAATAGAAATTCACA+GGG - chr5_3:24279657-24279676 None:intergenic 25.0%
! AAATTGGAATAGAAATTCAC+AGG - chr5_3:24279658-24279677 None:intergenic 25.0%
!! ACTCAAATTTAAGATGACAA+AGG + chr5_3:24279681-24279700 Msa0806270:intron 25.0%
! TGCAAATAATTAGTGTGTTT+AGG - chr5_3:24279860-24279879 None:intergenic 25.0%
!!! AAATACATAGGAGTTTTAGT+TGG + chr5_3:24280004-24280023 Msa0806270:intron 25.0%
!! ACATCTACATGTGATTTTTA+AGG + chr5_3:24280119-24280138 Msa0806270:intron 25.0%
!! CATCTACATGTGATTTTTAA+GGG + chr5_3:24280120-24280139 Msa0806270:intron 25.0%
!!! ATGTGATTTTTAAGGGATAT+TGG + chr5_3:24280127-24280146 Msa0806270:intron 25.0%
! TTGGTTACAAATTACAATTG+AGG + chr5_3:24280146-24280165 Msa0806270:intron 25.0%
!! CATTCAGAATAATCTTTTGT+TGG + chr5_3:24280468-24280487 Msa0806270:intron 25.0%
! GAAGATAACATTTCTAATGT+CGG - chr5_3:24280549-24280568 None:intergenic 25.0%
! TCTTGAAAAGTGAACATTTA+TGG - chr5_3:24280742-24280761 None:intergenic 25.0%
!! AAAGAGTTAACCAAATCTTT+TGG + chr5_3:24281486-24281505 Msa0806270:five_prime_UTR 25.0%
!!! TGAAGGTAAAGGTTTTTTAA+TGG + chr5_3:24281589-24281608 Msa0806270:intron 25.0%
!!! GTTTCTCATAGTTATTTTGT+AGG + chr5_3:24281614-24281633 Msa0806270:intron 25.0%
! ATTCAATATAGTTCATATGG+TGG - chr5_3:24281760-24281779 None:intergenic 25.0%
! TGCATTCAATATAGTTCATA+TGG - chr5_3:24281763-24281782 None:intergenic 25.0%
!! GAAAAGAATCATTTTATGGT+AGG + chr5_3:24281807-24281826 Msa0806270:intron 25.0%
!!! TAACCATGTATTTTAGCTTT+TGG + chr5_3:24282038-24282057 Msa0806270:intron 25.0%
!! ATGATTGTGATTTCATTTTC+AGG + chr5_3:24282128-24282147 Msa0806270:intron 25.0%
! ACAAGAATATAGAAAGTGAA+GGG - chr5_3:24282282-24282301 None:intergenic 25.0%
! TACAAGAATATAGAAAGTGA+AGG - chr5_3:24282283-24282302 None:intergenic 25.0%
! AAATATTTAAACACCAGAGT+AGG - chr5_3:24282406-24282425 None:intergenic 25.0%
!!! TTTGATGATTATTTTGCCAT+TGG + chr5_3:24282440-24282459 Msa0806270:intron 25.0%
! TATCAAGATCTAATTGTAAG+GGG - chr5_3:24282580-24282599 None:intergenic 25.0%
! CTATCAAGATCTAATTGTAA+GGG - chr5_3:24282581-24282600 None:intergenic 25.0%
! CTTACAATTAGATCTTGATA+GGG + chr5_3:24282580-24282599 Msa0806270:CDS 25.0%
!!! TCTTCTTGAAATGTGTTTTT+TGG + chr5_3:24283035-24283054 Msa0806270:intron 25.0%
! GATGAATGCAAAATATTAGA+TGG - chr5_3:24283220-24283239 None:intergenic 25.0%
! TTTCAGAACAAATTAAGATG+GGG - chr5_3:24283353-24283372 None:intergenic 25.0%
!! CTTTTCAGAACAAATTAAGA+TGG - chr5_3:24283355-24283374 None:intergenic 25.0%
! CCAATAGAAATATGTACATA+TGG - chr5_3:24283477-24283496 None:intergenic 25.0%
!! CCATATGTACATATTTCTAT+TGG + chr5_3:24283474-24283493 Msa0806270:intron 25.0%
!! GAATTCTGAAGACATAAATA+AGG + chr5_3:24283507-24283526 Msa0806270:intron 25.0%
! AGACATAAATAAGGGTAATA+TGG + chr5_3:24283516-24283535 Msa0806270:intron 25.0%
! AAATCAAAAGAAGAGAACAA+TGG - chr5_3:24283650-24283669 None:intergenic 25.0%
! TACTGTATACAAAACCAAAT+AGG - chr5_3:24283721-24283740 None:intergenic 25.0%
!!! GGTAAAATGAAAGTATTAGA+AGG + chr5_3:24283886-24283905 Msa0806270:intron 25.0%
!! TTGCTATTCATCAAACTTAT+AGG - chr5_3:24283947-24283966 None:intergenic 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24284003-24284022 Msa0806270:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24284003-24284022 Msa0806270:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24284158-24284177 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr5_3:24284159-24284178 Msa0806270:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24284003-24284022 Msa0806270:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24284158-24284177 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr5_3:24284159-24284178 Msa0806270:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24284003-24284022 Msa0806270:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24284158-24284177 None:intergenic 25.0%
! TAGAAGTTTGATAAACATGA+AGG + chr5_3:24284455-24284474 Msa0806270:intron 25.0%
! AATATTATGTTACGCATCAA+AGG - chr5_3:24284501-24284520 None:intergenic 25.0%
!! AACCTATTTGGTTTCATATT+CGG + chr5_3:24284666-24284685 Msa0806270:intron 25.0%
!! ATTCGGTAAAATGAAAGTAT+TGG + chr5_3:24283882-24283901 Msa0806270:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24284158-24284177 None:intergenic 25.0%
! AATATCATGTTTCGCATAAA+GGG - chr5_3:24284792-24284811 None:intergenic 25.0%
! AAATATCATGTTTCGCATAA+AGG - chr5_3:24284793-24284812 None:intergenic 25.0%
!!! AAATGAGGTTTTAGCATTTA+TGG + chr5_3:24284897-24284916 Msa0806270:intron 25.0%
!! AAACTGAAAGTATGAAAATG+TGG + chr5_3:24285013-24285032 Msa0806270:intron 25.0%
!!! GTTTTGAAGTTTGATAAAGA+AGG + chr5_3:24285362-24285381 Msa0806270:intron 25.0%
!!! TTGATATTTAGGACTAGTTA+TGG + chr5_3:24285410-24285429 Msa0806270:intron 25.0%
! CCAATAGAAATATGTACATA+TGG - chr5_3:24283477-24283496 None:intergenic 25.0%
!! CCATATGTACATATTTCTAT+TGG + chr5_3:24283474-24283493 Msa0806270:intron 25.0%
!! GAATTCTGAAGACATAAATA+AGG + chr5_3:24283507-24283526 Msa0806270:intron 25.0%
! AGACATAAATAAGGGTAATA+TGG + chr5_3:24283516-24283535 Msa0806270:intron 25.0%
! AAATCAAAAGAAGAGAACAA+TGG - chr5_3:24283650-24283669 None:intergenic 25.0%
! AAATCAAAAGAAGAGAACAA+TGG - chr5_3:24283650-24283669 None:intergenic 25.0%
!! TGTTCACATATCATGTTTTA+TGG - chr5_3:24285805-24285824 None:intergenic 25.0%
! ACATGATATGTGAACATATT+TGG + chr5_3:24285809-24285828 Msa0806270:intron 25.0%
!! TTGCTATTCATCAAACTTAT+AGG - chr5_3:24283947-24283966 None:intergenic 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24284003-24284022 Msa0806270:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24284003-24284022 Msa0806270:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24284158-24284177 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr5_3:24284159-24284178 Msa0806270:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24284003-24284022 Msa0806270:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24284158-24284177 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr5_3:24284159-24284178 Msa0806270:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24284003-24284022 Msa0806270:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24284158-24284177 None:intergenic 25.0%
! TATGGTTAGAAGTTTGATAA+AGG + chr5_3:24284159-24284178 Msa0806270:intron 25.0%
!!! AAATGAGATTTTAGCCTATA+TGG + chr5_3:24284003-24284022 Msa0806270:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24284158-24284177 None:intergenic 25.0%
! TAGAAGTTTGATAAACATGA+AGG + chr5_3:24284455-24284474 Msa0806270:intron 25.0%
! AATATTATGTTACGCATCAA+AGG - chr5_3:24284501-24284520 None:intergenic 25.0%
!! AACCTATTTGGTTTCATATT+CGG + chr5_3:24284666-24284685 Msa0806270:intron 25.0%
!! ATTCGGTAAAATGAAAGTAT+TGG + chr5_3:24283882-24283901 Msa0806270:intron 25.0%
! TATCAAACTTCTAACCATAT+AGG - chr5_3:24284158-24284177 None:intergenic 25.0%
! AATATCATGTTTCGCATAAA+GGG - chr5_3:24284792-24284811 None:intergenic 25.0%
! AAATATCATGTTTCGCATAA+AGG - chr5_3:24284793-24284812 None:intergenic 25.0%
! TTTATGCGAAACATGATATT+TGG + chr5_3:24284792-24284811 Msa0806270:intron 25.0%
!!! AAATGAGGTTTTAGCATTTA+TGG + chr5_3:24284897-24284916 Msa0806270:intron 25.0%
! AAAATCATATTTCGCATCAA+GGG - chr5_3:24287213-24287232 None:intergenic 25.0%
! AAAAATCATATTTCGCATCA+AGG - chr5_3:24287214-24287233 None:intergenic 25.0%
!!! ATTTTTAAGCTGAGTTTGTT+TGG + chr5_3:24287228-24287247 Msa0806270:intron 25.0%
!!! GTTTTGAAGTTTGATAAAGA+AGG + chr5_3:24285362-24285381 Msa0806270:intron 25.0%
!!! TTGATATTTAGGACTAGTTA+TGG + chr5_3:24285410-24285429 Msa0806270:intron 25.0%
! CCAATAGAAATATGTACATA+TGG - chr5_3:24283477-24283496 None:intergenic 25.0%
!! CCATATGTACATATTTCTAT+TGG + chr5_3:24283474-24283493 Msa0806270:intron 25.0%
!! GAATTCTGAAGACATAAATA+AGG + chr5_3:24283507-24283526 Msa0806270:intron 25.0%
! AGACATAAATAAGGGTAATA+TGG + chr5_3:24283516-24283535 Msa0806270:intron 25.0%
! AAATCAAAAGAAGAGAACAA+TGG - chr5_3:24283650-24283669 None:intergenic 25.0%
TGTGAATAATAAGCGAAGAA+GGG - chr5_3:24275895-24275914 None:intergenic 30.0%
ATGTGAATAATAAGCGAAGA+AGG - chr5_3:24275896-24275915 None:intergenic 30.0%
! TTACTAGGGTTTAAGATATC+TGG + chr5_3:24276185-24276204 Msa0806270:intron 30.0%
!!! GCAATGTGATGGTTATTTTT+TGG + chr5_3:24276336-24276355 Msa0806270:intron 30.0%
!! GGTGTCAACTTAATTTGTAA+CGG + chr5_3:24276492-24276511 Msa0806270:intron 30.0%
AAGGACAAAAATCAAACTAG+CGG - chr5_3:24276761-24276780 None:intergenic 30.0%
AACTACTACCAAATACGAAA+AGG - chr5_3:24276780-24276799 None:intergenic 30.0%
ACATCGGAATAATGTTTCTT+CGG - chr5_3:24276896-24276915 None:intergenic 30.0%
! TATTCCGATGTTTTCACTAT+TGG + chr5_3:24276905-24276924 Msa0806270:five_prime_UTR 30.0%
TATATAGATGTTACAGATGC+AGG + chr5_3:24277101-24277120 Msa0806270:five_prime_UTR 30.0%
AGTAAATATTCCGTCAGAAA+AGG + chr5_3:24277188-24277207 Msa0806270:five_prime_UTR 30.0%
! AGAAGAATAACCTTTTCTGA+CGG - chr5_3:24277201-24277220 None:intergenic 30.0%
! TTTTACACGAACTCCTATTA+AGG - chr5_3:24277325-24277344 None:intergenic 30.0%
ATTAAGAAATGAAGGGCAAT+AGG + chr5_3:24277345-24277364 Msa0806270:intron 30.0%
TTAAGAAATGAAGGGCAATA+GGG + chr5_3:24277346-24277365 Msa0806270:intron 30.0%
! AATTGATTTATTATGGCCCT+AGG + chr5_3:24277422-24277441 Msa0806270:intron 30.0%
TAGTTAAGGGATTAATCAGA+TGG + chr5_3:24277525-24277544 Msa0806270:intron 30.0%
CCAAACATGGAACTAATAAT+AGG - chr5_3:24277623-24277642 None:intergenic 30.0%
CCTATTATTAGTTCCATGTT+TGG + chr5_3:24277620-24277639 Msa0806270:intron 30.0%
TCAATTCTACCTTAAAGCTA+AGG + chr5_3:24277763-24277782 Msa0806270:intron 30.0%
CAATTCTACCTTAAAGCTAA+GGG + chr5_3:24277764-24277783 Msa0806270:intron 30.0%
TGATCTGATATAAGTAACAC+TGG - chr5_3:24277794-24277813 None:intergenic 30.0%
CTTCGATATTTCCAAAATAG+CGG - chr5_3:24278327-24278346 None:intergenic 30.0%
TCGAAGTTGCTAAATCATAT+CGG + chr5_3:24278341-24278360 Msa0806270:intron 30.0%
ATAACTCATCCTTACAAAAC+AGG + chr5_3:24278391-24278410 Msa0806270:intron 30.0%
! CTCTTTTCACAAATTCTCAT+CGG + chr5_3:24278435-24278454 Msa0806270:intron 30.0%
GGTATCATAGCTTATCAATT+TGG - chr5_3:24278550-24278569 None:intergenic 30.0%
!! ACGATTTTGACCATGAAAAA+AGG - chr5_3:24278758-24278777 None:intergenic 30.0%
! CTAAAAATACTAGGGACTTT+TGG - chr5_3:24279355-24279374 None:intergenic 30.0%
CTTGGAAGCTAAAAATACTA+GGG - chr5_3:24279363-24279382 None:intergenic 30.0%
ACTTGGAAGCTAAAAATACT+AGG - chr5_3:24279364-24279383 None:intergenic 30.0%
GAACGTAAAGTGATTATGTT+TGG - chr5_3:24279457-24279476 None:intergenic 30.0%
TAAAGTTAGGATGTTGTTGT+AGG + chr5_3:24279546-24279565 Msa0806270:intron 30.0%
! GATGTTGTTGTAGGTTATTT+TGG + chr5_3:24279555-24279574 Msa0806270:intron 30.0%
ATTGGAATAGAAATTCACAG+GGG - chr5_3:24279656-24279675 None:intergenic 30.0%
CTTAAATTTGAGTGCGAAAT+TGG - chr5_3:24279674-24279693 None:intergenic 30.0%
! ACAAAGCACTTAAACTTGTA+TGG - chr5_3:24279727-24279746 None:intergenic 30.0%
TTTGAACAACTATTCTTAGC+AGG + chr5_3:24279746-24279765 Msa0806270:intron 30.0%
TTGTGTTTGCATCAAAAAGA+GGG - chr5_3:24279831-24279850 None:intergenic 30.0%
!! TTTTTCAATTGCATGAACAC+TGG + chr5_3:24279940-24279959 Msa0806270:intron 30.0%
! AGTTGGTGCTTTAATGAAAT+AGG + chr5_3:24280021-24280040 Msa0806270:intron 30.0%
!! GACCAATTACTTTTCTTGTA+AGG + chr5_3:24280093-24280112 Msa0806270:intron 30.0%
GTCCTTACAAGAAAAGTAAT+TGG - chr5_3:24280098-24280117 None:intergenic 30.0%
TTACAATTGAGGTTATTCCA+TGG + chr5_3:24280157-24280176 Msa0806270:intron 30.0%
!!! TTTTTTTTATCACAGCCTTG+AGG + chr5_3:24280290-24280309 Msa0806270:intron 30.0%
!!! TTTTTTTATCACAGCCTTGA+GGG + chr5_3:24280291-24280310 Msa0806270:intron 30.0%
TAGTGTTAGATATCCAGTTT+GGG + chr5_3:24280338-24280357 Msa0806270:intron 30.0%
! TATAACATAGTTCTGTTGTG+TGG + chr5_3:24280657-24280676 Msa0806270:intron 30.0%
! TTATGGATTGTTGAGAGAAA+AGG - chr5_3:24280725-24280744 None:intergenic 30.0%
AGAACAGAAATACAAGGAAA+TGG - chr5_3:24280809-24280828 None:intergenic 30.0%
CTGAATTTCTCTGTTTGATA+AGG + chr5_3:24280859-24280878 Msa0806270:intron 30.0%
!!! TCATGTTTTTTGTCTTTCTG+AGG + chr5_3:24280940-24280959 Msa0806270:intron 30.0%
! TGTGTTTCTGCAATATCAAA+AGG - chr5_3:24281019-24281038 None:intergenic 30.0%
AAAAAAGAAACTGGTTGTGT+CGG + chr5_3:24281199-24281218 Msa0806270:five_prime_UTR 30.0%
! TCACATTCCTTATTTCAGAA+AGG + chr5_3:24281276-24281295 Msa0806270:five_prime_UTR 30.0%
!! TGACTAACCTTTCTGAAATA+AGG - chr5_3:24281286-24281305 None:intergenic 30.0%
! AGTTAACCAAATCTTTTGGA+TGG + chr5_3:24281490-24281509 Msa0806270:five_prime_UTR 30.0%
! GTTAACCAAATCTTTTGGAT+GGG + chr5_3:24281491-24281510 Msa0806270:five_prime_UTR 30.0%
ATGATGTCTAAGAACTTAAC+AGG + chr5_3:24281538-24281557 Msa0806270:five_prime_UTR 30.0%
TGATGTCTAAGAACTTAACA+GGG + chr5_3:24281539-24281558 Msa0806270:five_prime_UTR 30.0%
AAAGCTAGAAGACAAAATGA+AGG + chr5_3:24281572-24281591 Msa0806270:exon 30.0%
AGAAGACAAAATGAAGGTAA+AGG + chr5_3:24281578-24281597 Msa0806270:intron 30.0%
GTCTCGAAGATTATTTATTG+AGG + chr5_3:24281679-24281698 Msa0806270:intron 30.0%
CTATATTGAATGCATGAATG+TGG + chr5_3:24281769-24281788 Msa0806270:CDS 30.0%
GAAGAATGATGTGTAAACAA+TGG - chr5_3:24281853-24281872 None:intergenic 30.0%
! TGCTTCTTTTGATAAGTATG+TGG + chr5_3:24281949-24281968 Msa0806270:CDS 30.0%
CAACCAAAAGCTAAAATACA+TGG - chr5_3:24282044-24282063 None:intergenic 30.0%
TTCTTCAGCTTCAGTTAAAA+CGG + chr5_3:24282190-24282209 Msa0806270:CDS 30.0%
GGTGAGAAACAAATATTACA+GGG - chr5_3:24282372-24282391 None:intergenic 30.0%
TGGTGAGAAACAAATATTAC+AGG - chr5_3:24282373-24282392 None:intergenic 30.0%
CAAAACAAAATCACATCCAA+TGG - chr5_3:24282459-24282478 None:intergenic 30.0%
!!! TGGATGTGATTTTGTTTTGT+TGG + chr5_3:24282460-24282479 Msa0806270:intron 30.0%
TCTGTTTGCAATCAAGTTAA+TGG - chr5_3:24282538-24282557 None:intergenic 30.0%
CCTATCAAGATCTAATTGTA+AGG - chr5_3:24282582-24282601 None:intergenic 30.0%
CCTTACAATTAGATCTTGAT+AGG + chr5_3:24282579-24282598 Msa0806270:CDS 30.0%
TTAGATCTTGATAGGGATAA+TGG + chr5_3:24282587-24282606 Msa0806270:CDS 30.0%
TAGATCTTGATAGGGATAAT+GGG + chr5_3:24282588-24282607 Msa0806270:CDS 30.0%
AATACCTGTGAAGTGTATAA+AGG - chr5_3:24282652-24282671 None:intergenic 30.0%
CAGAAAATGAGAAAAACATG+AGG - chr5_3:24282979-24282998 None:intergenic 30.0%
! GTATTATTTGAAACTTCCCA+GGG - chr5_3:24283006-24283025 None:intergenic 30.0%
! AGTATTATTTGAAACTTCCC+AGG - chr5_3:24283007-24283026 None:intergenic 30.0%
TTAAGATGGATGGTAAGTTA+TGG + chr5_3:24283399-24283418 Msa0806270:three_prime_UTR 30.0%
ACATGATATGTGAACCTATT+TGG + chr5_3:24283704-24283723 Msa0806270:intron 30.0%
!! AAATCTCATTTTCGAGACAA+GGG - chr5_3:24283764-24283783 None:intergenic 30.0%
!! AAAATCTCATTTTCGAGACA+AGG - chr5_3:24283765-24283784 None:intergenic 30.0%
! TTGTCTCGAAAATGAGATTT+TGG + chr5_3:24283764-24283783 Msa0806270:intron 30.0%
! TGGCTACAAGTTTGATAATT+AGG + chr5_3:24283793-24283812 Msa0806270:intron 30.0%
ACATATCATGTTTCGCATTA+AGG - chr5_3:24283844-24283863 None:intergenic 30.0%
!!! ACCCTATTTGGTTTTGTATT+CGG + chr5_3:24283865-24283884 Msa0806270:intron 30.0%
ACCGAATACAAAACCAAATA+GGG - chr5_3:24283869-24283888 None:intergenic 30.0%
TACCGAATACAAAACCAAAT+AGG - chr5_3:24283870-24283889 None:intergenic 30.0%
TAGCCTATATGGTTAGATAA+AGG + chr5_3:24284014-24284033 Msa0806270:intron 30.0%
CAACCTTTATCTAACCATAT+AGG - chr5_3:24284020-24284039 None:intergenic 30.0%
TCGGTAAAATGTAAGTGTAT+TGG + chr5_3:24284101-24284120 Msa0806270:intron 30.0%
!! AAATCTCATTTTTGCGACAA+GGG - chr5_3:24284132-24284151 None:intergenic 30.0%
!! AAAATCTCATTTTTGCGACA+AGG - chr5_3:24284133-24284152 None:intergenic 30.0%
! TCGGTAAAATGAAAGTGTAT+TGG + chr5_3:24284246-24284265 Msa0806270:intron 30.0%
!! AAATCTCATTTTTGCGACAA+GGG - chr5_3:24284132-24284151 None:intergenic 30.0%
!! AAAATCTCATTTTTGCGACA+AGG - chr5_3:24284133-24284152 None:intergenic 30.0%
! TCGGTAAAATGAAAGTGTAT+TGG + chr5_3:24284246-24284265 Msa0806270:intron 30.0%
!! AAATCTCATTTTTGCGACAA+GGG - chr5_3:24284132-24284151 None:intergenic 30.0%
!! AAAATCTCATTTTTGCGACA+AGG - chr5_3:24284133-24284152 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr5_3:24283704-24283723 Msa0806270:intron 30.0%
TACCGAATATGAAACCAAAT+AGG - chr5_3:24284671-24284690 None:intergenic 30.0%
AAACGAGAATTTAGCCTATA+TGG + chr5_3:24284722-24284741 Msa0806270:intron 30.0%
TTCGCATAAAGGGATATATA+GGG - chr5_3:24284782-24284801 None:intergenic 30.0%
TTTCGCATAAAGGGATATAT+AGG - chr5_3:24284783-24284802 None:intergenic 30.0%
GAAATCATATTTCGCATCAA+GGG - chr5_3:24284967-24284986 None:intergenic 30.0%
AGAAATCATATTTCGCATCA+AGG - chr5_3:24284968-24284987 None:intergenic 30.0%
! ATTTCTAAGCTGAGTTTGTT+TGG + chr5_3:24284982-24285001 Msa0806270:intron 30.0%
!! CTAAAATCATTTTCGGTTTG+AGG - chr5_3:24285048-24285067 None:intergenic 30.0%
ATGTGATATTTGAGCATAGA+AGG + chr5_3:24285130-24285149 Msa0806270:intron 30.0%
CTTCAAAACAATGGTCATAA+AGG - chr5_3:24285351-24285370 None:intergenic 30.0%
ATAAAGAAGGTTGAACTTGT+CGG + chr5_3:24285375-24285394 Msa0806270:intron 30.0%
AGTATATGCATCAAAAACAC+AGG - chr5_3:24285611-24285630 None:intergenic 30.0%
!! AAATCTCATTTTCGAGACAA+GGG - chr5_3:24283764-24283783 None:intergenic 30.0%
!! AAAATCTCATTTTCGAGACA+AGG - chr5_3:24283765-24283784 None:intergenic 30.0%
! TTGTCTCGAAAATGAGATTT+TGG + chr5_3:24283764-24283783 Msa0806270:intron 30.0%
! TGGCTACAAGTTTGATAATT+AGG + chr5_3:24283793-24283812 Msa0806270:intron 30.0%
CATATCATGTTTCGCATTAA+GGG - chr5_3:24283843-24283862 None:intergenic 30.0%
ACATATCATGTTTCGCATTA+AGG - chr5_3:24283844-24283863 None:intergenic 30.0%
!!! ACCCTATTTGGTTTTGTATT+CGG + chr5_3:24283865-24283884 Msa0806270:intron 30.0%
ACCGAATACAAAACCAAATA+GGG - chr5_3:24283869-24283888 None:intergenic 30.0%
TACCGAATACAAAACCAAAT+AGG - chr5_3:24283870-24283889 None:intergenic 30.0%
TAGCCTATATGGTTAGATAA+AGG + chr5_3:24284014-24284033 Msa0806270:intron 30.0%
CAACCTTTATCTAACCATAT+AGG - chr5_3:24284020-24284039 None:intergenic 30.0%
! TCGGTAAAATGAAAGTGTAT+TGG + chr5_3:24284246-24284265 Msa0806270:intron 30.0%
!! AAATCTCATTTTTGCGACAA+GGG - chr5_3:24284132-24284151 None:intergenic 30.0%
!! AAAATCTCATTTTTGCGACA+AGG - chr5_3:24284133-24284152 None:intergenic 30.0%
! TCGGTAAAATGAAAGTGTAT+TGG + chr5_3:24284246-24284265 Msa0806270:intron 30.0%
!! AAATCTCATTTTTGCGACAA+GGG - chr5_3:24284132-24284151 None:intergenic 30.0%
!! AAAATCTCATTTTTGCGACA+AGG - chr5_3:24284133-24284152 None:intergenic 30.0%
!! AGGCTAAAATCTCATTTTTG+CGG - chr5_3:24284138-24284157 None:intergenic 30.0%
! TCGGTAAAATGAAAGTGTAT+TGG + chr5_3:24284246-24284265 Msa0806270:intron 30.0%
!! AAATCTCATTTTTGCGACAA+GGG - chr5_3:24284132-24284151 None:intergenic 30.0%
!! AAAATCTCATTTTTGCGACA+AGG - chr5_3:24284133-24284152 None:intergenic 30.0%
ACATGATATGTGAACCTATT+TGG + chr5_3:24283704-24283723 Msa0806270:intron 30.0%
TACCGAATATGAAACCAAAT+AGG - chr5_3:24284671-24284690 None:intergenic 30.0%
!! AAACGAGATTTTAGCCTATA+TGG + chr5_3:24286968-24286987 Msa0806270:intron 30.0%
TTCGCATAAAGGGATATATA+GGG - chr5_3:24284782-24284801 None:intergenic 30.0%
TTTCGCATAAAGGGATATAT+AGG - chr5_3:24284783-24284802 None:intergenic 30.0%
! AAACTGGAAGTATGAAAATG+TGG + chr5_3:24287259-24287278 Msa0806270:intron 30.0%
!! CTAAAATCATTTTCGGTTTG+AGG - chr5_3:24285048-24285067 None:intergenic 30.0%
ATGTGATATTTGAGCATAGA+AGG + chr5_3:24285130-24285149 Msa0806270:intron 30.0%
CTTCAAAACAATGGTCATAA+AGG - chr5_3:24285351-24285370 None:intergenic 30.0%
ATAAAGAAGGTTGAACTTGT+CGG + chr5_3:24285375-24285394 Msa0806270:intron 30.0%
GTGAATAATAAGCGAAGAAG+GGG - chr5_3:24275894-24275913 None:intergenic 35.0%
ATGCGGAAATCGAAATCTTT+CGG - chr5_3:24276095-24276114 None:intergenic 35.0%
ATTGCAAGAACAACGAAATG+CGG - chr5_3:24276112-24276131 None:intergenic 35.0%
GATTTCAGTGAATGAATGTG+TGG + chr5_3:24276672-24276691 Msa0806270:intron 35.0%
! GGACTATTGACAATTTTTCG+AGG + chr5_3:24276867-24276886 Msa0806270:five_prime_UTR 35.0%
! TCACTATTGGTGGCTATAAA+TGG + chr5_3:24276918-24276937 Msa0806270:five_prime_UTR 35.0%
!! TATTGATTTAAACGTGCAGG+CGG + chr5_3:24277033-24277052 Msa0806270:intron 35.0%
!! TGAAATTTGCTCCCTTTTGT+GGG + chr5_3:24277281-24277300 Msa0806270:intron 35.0%
!! ACCCATTGATTCTGTAGTTA+AGG + chr5_3:24277511-24277530 Msa0806270:intron 35.0%
CCCTTAACTACAGAATCAAT+GGG - chr5_3:24277515-24277534 None:intergenic 35.0%
!! CCCATTGATTCTGTAGTTAA+GGG + chr5_3:24277512-24277531 Msa0806270:intron 35.0%
TCCCTTAACTACAGAATCAA+TGG - chr5_3:24277516-24277535 None:intergenic 35.0%
TTAAGGGATTAATCAGATGG+AGG + chr5_3:24277528-24277547 Msa0806270:intron 35.0%
! ATAGTCTATTTGCTAGACGT+TGG + chr5_3:24277551-24277570 Msa0806270:intron 35.0%
! TAGTCTATTTGCTAGACGTT+GGG + chr5_3:24277552-24277571 Msa0806270:intron 35.0%
GATTTGACCACACATTTGTT+AGG + chr5_3:24277676-24277695 Msa0806270:intron 35.0%
TTAGCTTCCAACTTCAACAT+TGG + chr5_3:24277726-24277745 Msa0806270:intron 35.0%
TTCCTCTATTCATGCCATTA+TGG + chr5_3:24278283-24278302 Msa0806270:intron 35.0%
TCCTCTATTCATGCCATTAT+GGG + chr5_3:24278284-24278303 Msa0806270:intron 35.0%
! CATATCGGTTATACCCATAA+TGG - chr5_3:24278300-24278319 None:intergenic 35.0%
! TTACAAAGGCCTGTTTTGTA+AGG - chr5_3:24278403-24278422 None:intergenic 35.0%
TTACAAAACAGGCCTTTGTA+AGG + chr5_3:24278402-24278421 Msa0806270:intron 35.0%
CGATGAGAATTTGTGAAAAG+AGG - chr5_3:24278437-24278456 None:intergenic 35.0%
ACCATGTTGAGATTGTATCT+CGG + chr5_3:24278567-24278586 Msa0806270:intron 35.0%
TGTATCTCGGTTGTTAATAG+CGG + chr5_3:24278580-24278599 Msa0806270:intron 35.0%
CATGGTCAAAATCGTACAAT+CGG + chr5_3:24278763-24278782 Msa0806270:intron 35.0%
GATTGTACTGTGAAAAACTG+AGG + chr5_3:24278894-24278913 Msa0806270:intron 35.0%
CATTTCAGCATTGTTAACAG+AGG + chr5_3:24279030-24279049 Msa0806270:intron 35.0%
GCTATACCGCTATATTGTAT+AGG - chr5_3:24279071-24279090 None:intergenic 35.0%
ATAACACTCGGGTATATGTT+TGG + chr5_3:24279111-24279130 Msa0806270:intron 35.0%
TGTGAATGTGTATGGTAACT+TGG - chr5_3:24279381-24279400 None:intergenic 35.0%
TTATCGAGAGTGGTAAAGTT+AGG + chr5_3:24279533-24279552 Msa0806270:intron 35.0%
TATGGAGGATATTGTCAAGA+AGG - chr5_3:24279709-24279728 None:intergenic 35.0%
AAGCACTTAAACTTGTATGG+AGG - chr5_3:24279724-24279743 None:intergenic 35.0%
TGTGTTTGCATCAAAAAGAG+GGG - chr5_3:24279830-24279849 None:intergenic 35.0%
CTTGTGTTTGCATCAAAAAG+AGG - chr5_3:24279832-24279851 None:intergenic 35.0%
GGTGCTTTAATGAAATAGGA+TGG + chr5_3:24280025-24280044 Msa0806270:intron 35.0%
CCTATACATGACATCTTCTA+CGG - chr5_3:24280072-24280091 None:intergenic 35.0%
TGACTCTTCTTAAAGTAACC+CGG - chr5_3:24280189-24280208 None:intergenic 35.0%
GTAGTGTTAGATATCCAGTT+TGG + chr5_3:24280337-24280356 Msa0806270:intron 35.0%
! ATCTTTTGTTGGAACCTAAG+AGG + chr5_3:24280479-24280498 Msa0806270:intron 35.0%
GGAGAGTTGAATACTTATGT+TGG + chr5_3:24280880-24280899 Msa0806270:intron 35.0%
!! CTTTCTGAGGATAACTTGTT+TGG + chr5_3:24280953-24280972 Msa0806270:intron 35.0%
GAATTGTATGATCCTAGTAG+AGG + chr5_3:24281097-24281116 Msa0806270:five_prime_UTR 35.0%
TGCGCAAAAATCTTGATTAC+TGG + chr5_3:24281164-24281183 Msa0806270:five_prime_UTR 35.0%
GCGCAAAAATCTTGATTACT+GGG + chr5_3:24281165-24281184 Msa0806270:five_prime_UTR 35.0%
CGTGACTCAAAAAAAGAAAC+TGG + chr5_3:24281190-24281209 Msa0806270:five_prime_UTR 35.0%
! TTTCAGAAAGGTTAGTCAGT+AGG + chr5_3:24281288-24281307 Msa0806270:intron 35.0%
! TTCAGAAAGGTTAGTCAGTA+GGG + chr5_3:24281289-24281308 Msa0806270:intron 35.0%
CATAAGACACATCCTTCTTT+CGG - chr5_3:24281336-24281355 None:intergenic 35.0%
ACTGAAAATGATATGCCATC+TGG + chr5_3:24281396-24281415 Msa0806270:five_prime_UTR 35.0%
CTGAAAATGATATGCCATCT+GGG + chr5_3:24281397-24281416 Msa0806270:five_prime_UTR 35.0%
TGTATCCCATCCAAAAGATT+TGG - chr5_3:24281499-24281518 None:intergenic 35.0%
ACCATACAGAAGTTGTTTGA+AGG + chr5_3:24281734-24281753 Msa0806270:CDS 35.0%
!!! GGTAGGTATTTTTTGGCTTT+AGG + chr5_3:24281824-24281843 Msa0806270:intron 35.0%
!! TCATTTTCAGGAAGCAAGAA+AGG + chr5_3:24282140-24282159 Msa0806270:intron 35.0%
!! CATTTTCAGGAAGCAAGAAA+GGG + chr5_3:24282141-24282160 Msa0806270:intron 35.0%
TTTAACTGAAGCTGAAGAAC+AGG - chr5_3:24282189-24282208 None:intergenic 35.0%
AAATTCACAGAAGCCCAAAA+TGG - chr5_3:24282347-24282366 None:intergenic 35.0%
TTAATGGCCATTACAGTTAC+AGG - chr5_3:24282522-24282541 None:intergenic 35.0%
CTCCTAACTGAACATGATAT+CGG + chr5_3:24282831-24282850 Msa0806270:three_prime_UTR 35.0%
TTCCGATATCATGTTCAGTT+AGG - chr5_3:24282836-24282855 None:intergenic 35.0%
TGCAGACATAAGTTGTCAAT+CGG + chr5_3:24282906-24282925 Msa0806270:intron 35.0%
ATACCTGTCTATCTTACATG+TGG + chr5_3:24283111-24283130 Msa0806270:three_prime_UTR 35.0%
GCAACCACTTCTGTTTATAT+CGG + chr5_3:24283271-24283290 Msa0806270:three_prime_UTR 35.0%
CAACCACTTCTGTTTATATC+GGG + chr5_3:24283272-24283291 Msa0806270:three_prime_UTR 35.0%
TTTCCCGATATAAACAGAAG+TGG - chr5_3:24283278-24283297 None:intergenic 35.0%
!!! TGGTAAGTTATGGTTTTAGC+AGG + chr5_3:24283409-24283428 Msa0806270:three_prime_UTR 35.0%
CTCTTATAGAGTAGATGCAT+CGG - chr5_3:24283609-24283628 None:intergenic 35.0%
GGTTCACATATCATGTTTCA+TGG - chr5_3:24283700-24283719 None:intergenic 35.0%
!! AAATGAGATTTTGGCCTACA+TGG + chr5_3:24283773-24283792 Msa0806270:intron 35.0%
TATCAAACTTGTAGCCATGT+AGG - chr5_3:24283790-24283809 None:intergenic 35.0%
TTCGCATTAAGGAACATCAA+GGG - chr5_3:24283833-24283852 None:intergenic 35.0%
TTTCGCATTAAGGAACATCA+AGG - chr5_3:24283834-24283853 None:intergenic 35.0%
ACATGATATGTGACCCTATT+TGG + chr5_3:24283853-24283872 Msa0806270:intron 35.0%
! AAAATCTCATTTTCGCGACA+AGG - chr5_3:24283914-24283933 None:intergenic 35.0%
! TTGTCGCGAAAATGAGATTT+TGG + chr5_3:24283913-24283932 Msa0806270:intron 35.0%
CATATCATGTTTCGCATCAA+GGG - chr5_3:24284644-24284663 None:intergenic 35.0%
ACATATCATGTTTCGCATCA+AGG - chr5_3:24284645-24284664 None:intergenic 35.0%
!! AAATGAGATTTTGGCCTACA+TGG + chr5_3:24283773-24283792 Msa0806270:intron 35.0%
TATCAAACTTGTAGCCATGT+AGG - chr5_3:24283790-24283809 None:intergenic 35.0%
ACATGATATGTGACCCTATT+TGG + chr5_3:24283853-24283872 Msa0806270:intron 35.0%
! AAAATCTCATTTTCGCGACA+AGG - chr5_3:24283914-24283933 None:intergenic 35.0%
! TTGTCGCGAAAATGAGATTT+TGG + chr5_3:24283913-24283932 Msa0806270:intron 35.0%
! TCGGTAAACTGAAAGTGTAT+TGG + chr5_3:24286496-24286515 Msa0806270:intron 35.0%
!! GGCTAAAATCTCATTTTTGC+GGG - chr5_3:24284137-24284156 None:intergenic 35.0%
CATATCATGTTTCGCATCAA+GGG - chr5_3:24284644-24284663 None:intergenic 35.0%
ACATATCATGTTTCGCATCA+AGG - chr5_3:24284645-24284664 None:intergenic 35.0%
TTGTTTGGATTTCGCTAAAC+TGG + chr5_3:24284997-24285016 Msa0806270:intron 35.0%
AGTATATGCATCAGAAACAC+AGG - chr5_3:24285705-24285724 None:intergenic 35.0%
AGCATCAGTTGCGTTTACTA+CGG - chr5_3:24275841-24275860 None:intergenic 40.0%
ACGCGATTGATTACCTCTAA+CGG - chr5_3:24276046-24276065 None:intergenic 40.0%
GTAGCAACAGAATCTTGAAG+TGG + chr5_3:24276245-24276264 Msa0806270:intron 40.0%
ACAACAACAGCATCAGAGTT+AGG - chr5_3:24276288-24276307 None:intergenic 40.0%
! TCTGATGCTGTTGTTGTTGA+AGG + chr5_3:24276291-24276310 Msa0806270:five_prime_UTR 40.0%
CACATTGCATTACCTTCCAT+AGG - chr5_3:24276324-24276343 None:intergenic 40.0%
TGGAAGGTAATGCAATGTGA+TGG + chr5_3:24276325-24276344 Msa0806270:intron 40.0%
AGCAGAAAACACAAGTACAG+TGG + chr5_3:24276802-24276821 Msa0806270:five_prime_UTR 40.0%
! TCCGATGTTTTCACTATTGG+TGG + chr5_3:24276908-24276927 Msa0806270:five_prime_UTR 40.0%
GCCACCAATAGTGAAAACAT+CGG - chr5_3:24276912-24276931 None:intergenic 40.0%
GCAAATCTAGTCCAACCATA+AGG - chr5_3:24277134-24277153 None:intergenic 40.0%
!! CTGAAATTTGCTCCCTTTTG+TGG + chr5_3:24277280-24277299 Msa0806270:intron 40.0%
!! GAAATTTGCTCCCTTTTGTG+GGG + chr5_3:24277282-24277301 Msa0806270:intron 40.0%
ACATTTAGCACCCCACAAAA+GGG - chr5_3:24277295-24277314 None:intergenic 40.0%
AACATTTAGCACCCCACAAA+AGG - chr5_3:24277296-24277315 None:intergenic 40.0%
! AGTCTATTTGCTAGACGTTG+GGG + chr5_3:24277553-24277572 Msa0806270:intron 40.0%
TAACCCAAAGTGAATCTAGG+TGG - chr5_3:24277647-24277666 None:intergenic 40.0%
GACTAACCCAAAGTGAATCT+AGG - chr5_3:24277650-24277669 None:intergenic 40.0%
! GACCACACATTTGTTAGGTT+TGG + chr5_3:24277681-24277700 Msa0806270:intron 40.0%
AGCCAAACCTAACAAATGTG+TGG - chr5_3:24277686-24277705 None:intergenic 40.0%
GCAAGAACCAATGTTGAAGT+TGG - chr5_3:24277736-24277755 None:intergenic 40.0%
! AAATAGTGGAAGCCGCAAAA+CGG + chr5_3:24277832-24277851 Msa0806270:intron 40.0%
! TTCTCATCGGACTTTTGTCT+CGG - chr5_3:24278185-24278204 None:intergenic 40.0%
ACCCATAATGGCATGAATAG+AGG - chr5_3:24278288-24278307 None:intergenic 40.0%
CAAAATAGCGGCAAGCATAT+CGG - chr5_3:24278315-24278334 None:intergenic 40.0%
TTTGTATCGTCCGTTGAAGT+TGG + chr5_3:24278366-24278385 Msa0806270:intron 40.0%
TTGTATCGTCCGTTGAAGTT+GGG + chr5_3:24278367-24278386 Msa0806270:intron 40.0%
TGAGTTATGCCCAACTTCAA+CGG - chr5_3:24278379-24278398 None:intergenic 40.0%
TGAGAAAAGCCCAATAGTGT+AGG - chr5_3:24278466-24278485 None:intergenic 40.0%
ACCGAGATACAATCTCAACA+TGG - chr5_3:24278571-24278590 None:intergenic 40.0%
!!! GCATCGCGTTTTGTCATTTT+AGG - chr5_3:24278632-24278651 None:intergenic 40.0%
!! GTACCCTTCATCCTTTTTCA+CGG + chr5_3:24278811-24278830 Msa0806270:intron 40.0%
TGACCGTGAAAAAGGATGAA+GGG - chr5_3:24278817-24278836 None:intergenic 40.0%
TTGACCGTGAAAAAGGATGA+AGG - chr5_3:24278818-24278837 None:intergenic 40.0%
TCTTCTCTTGACCGTGAAAA+AGG - chr5_3:24278825-24278844 None:intergenic 40.0%
TGTACTGTGAAAAACTGAGG+AGG + chr5_3:24278897-24278916 Msa0806270:intron 40.0%
AACAATGCTGAAATGCAGCA+CGG - chr5_3:24279025-24279044 None:intergenic 40.0%
TATGTTTGGATGGAAGGTCT+TGG + chr5_3:24279125-24279144 Msa0806270:intron 40.0%
! TTTGGGAGGAGAATTTTGGA+GGG - chr5_3:24279337-24279356 None:intergenic 40.0%
!! TTTTGGGAGGAGAATTTTGG+AGG - chr5_3:24279338-24279357 None:intergenic 40.0%
!! GACTTTTGGGAGGAGAATTT+TGG - chr5_3:24279341-24279360 None:intergenic 40.0%
! AAATACTAGGGACTTTTGGG+AGG - chr5_3:24279351-24279370 None:intergenic 40.0%
CTTTACCACTCTCGATAATC+TGG - chr5_3:24279531-24279550 None:intergenic 40.0%
ACTATTCTTAGCAGGAATGC+AGG + chr5_3:24279754-24279773 Msa0806270:intron 40.0%
GTGTTTGCATCAAAAAGAGG+GGG - chr5_3:24279829-24279848 None:intergenic 40.0%
CCGTAGAAGATGTCATGTAT+AGG + chr5_3:24280069-24280088 Msa0806270:intron 40.0%
GACTCTTCTTAAAGTAACCC+GGG - chr5_3:24280188-24280207 None:intergenic 40.0%
!! TGATGTGACCAGTTTGTTAC+AGG + chr5_3:24280406-24280425 Msa0806270:intron 40.0%
TGTTGGAACCTAAGAGGTTT+AGG + chr5_3:24280485-24280504 Msa0806270:intron 40.0%
TCTCTCTTCCTAAACCTCTT+AGG - chr5_3:24280496-24280515 None:intergenic 40.0%
AGAGAGACATGTCTCTTCTT+TGG + chr5_3:24280511-24280530 Msa0806270:intron 40.0%
GAGAGACATGTCTCTTCTTT+GGG + chr5_3:24280512-24280531 Msa0806270:intron 40.0%
AGAGACATGTCTCTTCTTTG+GGG + chr5_3:24280513-24280532 Msa0806270:intron 40.0%
GGATCATACAATTCAGCAAG+AGG - chr5_3:24281091-24281110 None:intergenic 40.0%
!! TGTGTCGGTTTGAAAAACCA+AGG + chr5_3:24281214-24281233 Msa0806270:five_prime_UTR 40.0%
TCATGTAACAAGTAGCTCCT+TGG - chr5_3:24281234-24281253 None:intergenic 40.0%
! GGCATATCATTTTCAGTCGT+GGG - chr5_3:24281393-24281412 None:intergenic 40.0%
! TGGCATATCATTTTCAGTCG+TGG - chr5_3:24281394-24281413 None:intergenic 40.0%
ACAAACTCTGTAATGCCAGA+GGG - chr5_3:24281428-24281447 None:intergenic 40.0%
AACAAACTCTGTAATGCCAG+AGG - chr5_3:24281429-24281448 None:intergenic 40.0%
!! TATTGAGGCTTCCACTTTTC+AGG + chr5_3:24281694-24281713 Msa0806270:intron 40.0%
!! ATTGAGGCTTCCACTTTTCA+GGG + chr5_3:24281695-24281714 Msa0806270:intron 40.0%
GCCTTCAAACAACTTCTGTA+TGG - chr5_3:24281738-24281757 None:intergenic 40.0%
GATCTTCAGCTTGATGTCAA+AGG + chr5_3:24281911-24281930 Msa0806270:intron 40.0%
AAGTATCATGCAGAGCAGTA+TGG + chr5_3:24281998-24282017 Msa0806270:CDS 40.0%
CCAGAGTAGGAAAAGAAGTT+TGG - chr5_3:24282393-24282412 None:intergenic 40.0%
! CCAAACTTCTTTTCCTACTC+TGG + chr5_3:24282390-24282409 Msa0806270:intron 40.0%
ATTGTAAGGGGAACTCATAG+CGG - chr5_3:24282568-24282587 None:intergenic 40.0%
CGAATACTTCTATCTGCGTT+AGG - chr5_3:24282626-24282645 None:intergenic 40.0%
GCAACCTTTATACACTTCAC+AGG + chr5_3:24282645-24282664 Msa0806270:CDS 40.0%
CATAAGTTGTCAATCGGAAG+TGG + chr5_3:24282912-24282931 Msa0806270:intron 40.0%
CAACTTAGCTATCTCTGACT+CGG - chr5_3:24282956-24282975 None:intergenic 40.0%
! TTCTCATTTTCTGACTTCCC+TGG + chr5_3:24282986-24283005 Msa0806270:intron 40.0%
! TCTCATTTTCTGACTTCCCT+GGG + chr5_3:24282987-24283006 Msa0806270:intron 40.0%
TATCTTACATGTGGCGATGT+AGG + chr5_3:24283120-24283139 Msa0806270:three_prime_UTR 40.0%
GTAAAGCTTGTGCACTTCAT+AGG + chr5_3:24283175-24283194 Msa0806270:three_prime_UTR 40.0%
! AAAATCTCGTTTTCGCAGCA+AGG - chr5_3:24284571-24284590 None:intergenic 40.0%
TATAAAGGTTGAACCCTCGA+TGG + chr5_3:24284618-24284637 Msa0806270:intron 40.0%
! AAATTCTCGTTTTCGCGACA+AGG - chr5_3:24284714-24284733 None:intergenic 40.0%
! GTTTCCAATTTTCGCGTCAA+GGG - chr5_3:24285214-24285233 None:intergenic 40.0%
! AGTTTCCAATTTTCGCGTCA+AGG - chr5_3:24285215-24285234 None:intergenic 40.0%
TTCACATCAACTGACATCGA+GGG - chr5_3:24285275-24285294 None:intergenic 40.0%
TTTCACATCAACTGACATCG+AGG - chr5_3:24285276-24285295 None:intergenic 40.0%
!!! GGACTAGTTATGGTTTTAGC+AGG + chr5_3:24285420-24285439 Msa0806270:intron 40.0%
TTCGCATTAAGGGACATCAA+GGG - chr5_3:24285938-24285957 None:intergenic 40.0%
TTTCGCATTAAGGGACATCA+AGG - chr5_3:24285939-24285958 None:intergenic 40.0%
! AAAATCTCGTTTTCGCAGCA+AGG - chr5_3:24284571-24284590 None:intergenic 40.0%
TATAAAGGTTGAACCCTCGA+TGG + chr5_3:24284618-24284637 Msa0806270:intron 40.0%
! AAATCTCGTTTTCGCGACAA+GGG - chr5_3:24286959-24286978 None:intergenic 40.0%
! AAAATCTCGTTTTCGCGACA+AGG - chr5_3:24286960-24286979 None:intergenic 40.0%
TGATTCTTGTCGCGAAAATG+AGG + chr5_3:24287128-24287147 Msa0806270:intron 40.0%
! GTTTCCAATTTTCGCGTCAA+GGG - chr5_3:24285214-24285233 None:intergenic 40.0%
! AGTTTCCAATTTTCGCGTCA+AGG - chr5_3:24285215-24285234 None:intergenic 40.0%
TTCACATCAACTGACATCGA+GGG - chr5_3:24285275-24285294 None:intergenic 40.0%
TTTCACATCAACTGACATCG+AGG - chr5_3:24285276-24285295 None:intergenic 40.0%
!!! GGACTAGTTATGGTTTTAGC+AGG + chr5_3:24285420-24285439 Msa0806270:intron 40.0%
!!! GGGAAGATGGGTTTTGGTTT+GGG - chr5_3:24275874-24275893 None:intergenic 45.0%
!! AAGAAGGGGAAGATGGGTTT+TGG - chr5_3:24275880-24275899 None:intergenic 45.0%
TAAGCGAAGAAGGGGAAGAT+GGG - chr5_3:24275886-24275905 None:intergenic 45.0%
ATAAGCGAAGAAGGGGAAGA+TGG - chr5_3:24275887-24275906 None:intergenic 45.0%
GGGGTTTGCGAATGATGAAA+GGG - chr5_3:24275968-24275987 None:intergenic 45.0%
TGGGGTTTGCGAATGATGAA+AGG - chr5_3:24275969-24275988 None:intergenic 45.0%
ATGAAGCGAGCGAAGAAACT+GGG - chr5_3:24275988-24276007 None:intergenic 45.0%
CGATTGATTACCTCTAACGG+AGG - chr5_3:24276043-24276062 None:intergenic 45.0%
TGTTGAAGGTCCTCAACCTA+TGG + chr5_3:24276305-24276324 Msa0806270:five_prime_UTR 45.0%
GCATTACCTTCCATAGGTTG+AGG - chr5_3:24276318-24276337 None:intergenic 45.0%
GATGAATGTGCGCAACGAAA+TGG + chr5_3:24276471-24276490 Msa0806270:intron 45.0%
CAGTTGAAGATCCGCCAATT+GGG + chr5_3:24276834-24276853 Msa0806270:five_prime_UTR 45.0%
CATGTGAATCTCCCAATTGG+CGG - chr5_3:24276848-24276867 None:intergenic 45.0%
GTCCATGTGAATCTCCCAAT+TGG - chr5_3:24276851-24276870 None:intergenic 45.0%
TGGATTAACAGCGTCAGAAG+TGG - chr5_3:24276953-24276972 None:intergenic 45.0%
CGGATACTGATCTTTCCGAA+GGG + chr5_3:24277053-24277072 Msa0806270:five_prime_UTR 45.0%
GGATACTGATCTTTCCGAAG+GGG + chr5_3:24277054-24277073 Msa0806270:five_prime_UTR 45.0%
TGTTCAGCATTGTTCCCCTT+CGG - chr5_3:24277071-24277090 None:intergenic 45.0%
TGCACAGTTCAGCTTAACTG+TGG + chr5_3:24277151-24277170 Msa0806270:five_prime_UTR 45.0%
CAGCTTAACTGTGGTCAATC+AGG + chr5_3:24277160-24277179 Msa0806270:five_prime_UTR 45.0%
AATGAAGGGCAATAGGGTCT+TGG + chr5_3:24277352-24277371 Msa0806270:intron 45.0%
GAATCTAGGTGGTCCAAACA+TGG - chr5_3:24277636-24277655 None:intergenic 45.0%
TGGACCACCTAGATTCACTT+TGG + chr5_3:24277640-24277659 Msa0806270:intron 45.0%
GGACCACCTAGATTCACTTT+GGG + chr5_3:24277641-24277660 Msa0806270:intron 45.0%
!! CTGGCATACCCTTAGCTTTA+AGG - chr5_3:24277775-24277794 None:intergenic 45.0%
! TCTCATCGGACTTTTGTCTC+GGG - chr5_3:24278184-24278203 None:intergenic 45.0%
! CGATATGCTTGCCGCTATTT+TGG + chr5_3:24278313-24278332 Msa0806270:intron 45.0%
AAACAGGCCTTTGTAAGGTG+AGG + chr5_3:24278407-24278426 Msa0806270:intron 45.0%
AGGTACTCCTCACCTTACAA+AGG - chr5_3:24278417-24278436 None:intergenic 45.0%
ATCGGAGAGTCCTACACTAT+TGG + chr5_3:24278453-24278472 Msa0806270:intron 45.0%
TCGGAGAGTCCTACACTATT+GGG + chr5_3:24278454-24278473 Msa0806270:intron 45.0%
!! GCTTGGTGCGTGTGTATAAT+TGG + chr5_3:24278516-24278535 Msa0806270:intron 45.0%
GGTGCGTGTGTATAATTGGT+CGG + chr5_3:24278520-24278539 Msa0806270:intron 45.0%
GAGGAGGAGAAGTGAATGAA+AGG + chr5_3:24278913-24278932 Msa0806270:intron 45.0%
!! GCGGTATAGCGCTGATATAT+TGG + chr5_3:24279081-24279100 Msa0806270:intron 45.0%
CACTCGGGTATATGTTTGGA+TGG + chr5_3:24279115-24279134 Msa0806270:intron 45.0%
CGGGTATATGTTTGGATGGA+AGG + chr5_3:24279119-24279138 Msa0806270:intron 45.0%
TTTGGATGGAAGGTCTTGGA+GGG + chr5_3:24279129-24279148 Msa0806270:intron 45.0%
!! TTGGGAGGAGAATTTTGGAG+GGG - chr5_3:24279336-24279355 None:intergenic 45.0%
TGTTGCCAGATTATCGAGAG+TGG + chr5_3:24279523-24279542 Msa0806270:intron 45.0%
GTCACAAAGATCTCTTCCTC+TGG + chr5_3:24280205-24280224 Msa0806270:intron 45.0%
AGATCTCTTCCTCTGGTCAT+AGG + chr5_3:24280212-24280231 Msa0806270:intron 45.0%
! CAAAAATAGCCTTGCCCTCA+AGG - chr5_3:24280308-24280327 None:intergenic 45.0%
!!! GGGCAAGGCTATTTTTGTAG+CGG + chr5_3:24280311-24280330 Msa0806270:intron 45.0%
!!! AAGGCTATTTTTGTAGCGGC+AGG + chr5_3:24280315-24280334 Msa0806270:intron 45.0%
!! AAGTGGGCTGGATAGGAAAT+GGG + chr5_3:24280373-24280392 Msa0806270:intron 45.0%
!! TGTGACCAGTTTGTTACAGG+AGG + chr5_3:24280409-24280428 Msa0806270:intron 45.0%
!! CAGTTTGTTACAGGAGGATC+CGG + chr5_3:24280415-24280434 Msa0806270:intron 45.0%
!! AGTTTGTTACAGGAGGATCC+GGG + chr5_3:24280416-24280435 Msa0806270:intron 45.0%
TTAATGCGCGTGAGAGTGAT+TGG + chr5_3:24281047-24281066 Msa0806270:five_prime_UTR 45.0%
TAATGCGCGTGAGAGTGATT+GGG + chr5_3:24281048-24281067 Msa0806270:five_prime_UTR 45.0%
TCCTAGTAGAGGCTATGTTG+TGG + chr5_3:24281108-24281127 Msa0806270:five_prime_UTR 45.0%
TCCACAACATAGCCTCTACT+AGG - chr5_3:24281112-24281131 None:intergenic 45.0%
GGAAGACAGATGCATACTTG+AGG + chr5_3:24281129-24281148 Msa0806270:five_prime_UTR 45.0%
CACAACAGTTCCCTGAAAAG+TGG - chr5_3:24281708-24281727 None:intergenic 45.0%
!! CACTTTTCAGGGAACTGTTG+TGG + chr5_3:24281706-24281725 Msa0806270:intron 45.0%
TTTCAGGGAACTGTTGTGGA+AGG + chr5_3:24281710-24281729 Msa0806270:intron 45.0%
TGTGGAAGTAGAACAGCTTG+AGG + chr5_3:24281967-24281986 Msa0806270:CDS 45.0%
GTGGAAGTAGAACAGCTTGA+GGG + chr5_3:24281968-24281987 Msa0806270:CDS 45.0%
TGCAGAGCAGTATGGTTTAC+AGG + chr5_3:24282006-24282025 Msa0806270:CDS 45.0%
AACTGAAGCTGAAGAACAGG+TGG - chr5_3:24282186-24282205 None:intergenic 45.0%
! TGATTTTGCGCGAGACACTA+TGG + chr5_3:24282221-24282240 Msa0806270:CDS 45.0%
TTCGACGCCTGTAACTGTAA+TGG + chr5_3:24282512-24282531 Msa0806270:intron 45.0%
CTTGACACTGATGCATCTAG+CGG - chr5_3:24282804-24282823 None:intergenic 45.0%
TTGTCAATCGGAAGTGGAGA+TGG + chr5_3:24282918-24282937 Msa0806270:intron 45.0%
TCGCCACATGTAAGATAGAC+AGG - chr5_3:24283117-24283136 None:intergenic 45.0%
!! TGTAGGCTTTGAAGAGACGT+TGG + chr5_3:24283137-24283156 Msa0806270:three_prime_UTR 45.0%
AGTAGATGCATCGGAAACAC+AGG - chr5_3:24283600-24283619 None:intergenic 45.0%
CGCATCATGTTTCGCATCAA+GGG - chr5_3:24283982-24284001 None:intergenic 45.0%
TCGCATCATGTTTCGCATCA+AGG - chr5_3:24283983-24284002 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24284050-24284069 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24284051-24284070 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24284050-24284069 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24284051-24284070 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24284050-24284069 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24284051-24284070 None:intergenic 45.0%
TACGCATCAAAGGACATCGA+GGG - chr5_3:24284491-24284510 None:intergenic 45.0%
TTACGCATCAAAGGACATCG+AGG - chr5_3:24284492-24284511 None:intergenic 45.0%
TGACTCTTGTCGCGAAAATG+AGG + chr5_3:24284882-24284901 Msa0806270:intron 45.0%
ATGACCCTTGACGCGAAAAT+TGG + chr5_3:24285207-24285226 Msa0806270:intron 45.0%
CGCATCATGTTTCGCATCAA+GGG - chr5_3:24283982-24284001 None:intergenic 45.0%
TCGCATCATGTTTCGCATCA+AGG - chr5_3:24283983-24284002 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24284050-24284069 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24284051-24284070 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24284050-24284069 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24284051-24284070 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24284050-24284069 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24284051-24284070 None:intergenic 45.0%
TTTGCATCAAGGGACATCGA+GGG - chr5_3:24284050-24284069 None:intergenic 45.0%
! TTTTGCATCAAGGGACATCG+AGG - chr5_3:24284051-24284070 None:intergenic 45.0%
TACGCATCAAAGGACATCGA+GGG - chr5_3:24284491-24284510 None:intergenic 45.0%
TTACGCATCAAAGGACATCG+AGG - chr5_3:24284492-24284511 None:intergenic 45.0%
ATGACCCTTGACGCGAAAAT+TGG + chr5_3:24285207-24285226 Msa0806270:intron 45.0%
!! TTAATATAAATTTGATAAAT+AGG + chr5_3:24285069-24285088 Msa0806270:intron 5.0%
!! TTAATATAAATTTGATAAAT+AGG + chr5_3:24285069-24285088 Msa0806270:intron 5.0%
!!! GGGGAAGATGGGTTTTGGTT+TGG - chr5_3:24275875-24275894 None:intergenic 50.0%
TGAAGCGAGCGAAGAAACTG+GGG - chr5_3:24275987-24276006 None:intergenic 50.0%
GATGAAGCGAGCGAAGAAAC+TGG - chr5_3:24275989-24276008 None:intergenic 50.0%
! AGGAGTGGTGGTGATAGTCA+TGG - chr5_3:24276023-24276042 None:intergenic 50.0%
GATTACCTCTAACGGAGGAG+TGG - chr5_3:24276038-24276057 None:intergenic 50.0%
GAAGGTCCTCAACCTATGGA+AGG + chr5_3:24276309-24276328 Msa0806270:five_prime_UTR 50.0%
CACAAGTACAGTGGATGCTG+TGG + chr5_3:24276811-24276830 Msa0806270:five_prime_UTR 50.0%
GCAGTTGAAGATCCGCCAAT+TGG + chr5_3:24276833-24276852 Msa0806270:five_prime_UTR 50.0%
CGCCAATTGGGAGATTCACA+TGG + chr5_3:24276846-24276865 Msa0806270:five_prime_UTR 50.0%
GCGGATACTGATCTTTCCGA+AGG + chr5_3:24277052-24277071 Msa0806270:five_prime_UTR 50.0%
GATGCAGGTTCGATGCCTTA+TGG + chr5_3:24277116-24277135 Msa0806270:five_prime_UTR 50.0%
CAGGTTCGATGCCTTATGGT+TGG + chr5_3:24277120-24277139 Msa0806270:five_prime_UTR 50.0%
GCAATAGGGTCTTGGCAGTT+TGG + chr5_3:24277360-24277379 Msa0806270:intron 50.0%
! AATAGTGTTGGGCGCAAGGA+GGG - chr5_3:24278494-24278513 None:intergenic 50.0%
TCCTTGCGCCCAACACTATT+GGG + chr5_3:24278494-24278513 Msa0806270:intron 50.0%
GCACCAAGCCCAATAGTGTT+GGG - chr5_3:24278505-24278524 None:intergenic 50.0%
GCGTGTGTATAATTGGTCGG+TGG + chr5_3:24278523-24278542 Msa0806270:intron 50.0%
TTGTTAATAGCGGCCGCTAC+CGG + chr5_3:24278590-24278609 Msa0806270:intron 50.0%
GTTGGAGAAAGCGAGTGAAG+CGG + chr5_3:24278671-24278690 Msa0806270:intron 50.0%
TGGCCAAAATCGGGTCTAAG+CGG + chr5_3:24278715-24278734 Msa0806270:intron 50.0%
AAGCGTATACTCCGATCCAG+CGG - chr5_3:24278791-24278810 None:intergenic 50.0%
GTTTGGATGGAAGGTCTTGG+AGG + chr5_3:24279128-24279147 Msa0806270:intron 50.0%
TTGGATGGAAGGTCTTGGAG+GGG + chr5_3:24279130-24279149 Msa0806270:intron 50.0%
!! GAGGAGAATTTTGGAGGGGA+GGG - chr5_3:24279332-24279351 None:intergenic 50.0%
CACAGGGGAACAAAACAGAC+TGG - chr5_3:24279641-24279660 None:intergenic 50.0%
GGTTATTCCATGGTCATGCC+CGG + chr5_3:24280167-24280186 Msa0806270:intron 50.0%
GTTATTCCATGGTCATGCCC+GGG + chr5_3:24280168-24280187 Msa0806270:intron 50.0%
TTATCACAGCCTTGAGGGCA+AGG + chr5_3:24280296-24280315 Msa0806270:intron 50.0%
TCCTATCCAGCCCACTTGTT+GGG - chr5_3:24280370-24280389 None:intergenic 50.0%
TTCCTATCCAGCCCACTTGT+TGG - chr5_3:24280371-24280390 None:intergenic 50.0%
!! CAAGTGGGCTGGATAGGAAA+TGG + chr5_3:24280372-24280391 Msa0806270:intron 50.0%
CGGATCCTCCTGTAACAAAC+TGG - chr5_3:24280417-24280436 None:intergenic 50.0%
AATGCGCGTGAGAGTGATTG+GGG + chr5_3:24281049-24281068 Msa0806270:five_prime_UTR 50.0%
TGCGCGAGACACTATGGTAA+AGG + chr5_3:24282227-24282246 Msa0806270:CDS 50.0%
CATGATATCGGAAGCTGCAG+TGG + chr5_3:24282843-24282862 Msa0806270:three_prime_UTR 50.0%
GGAGATTGATGCTCTTGCAG+AGG + chr5_3:24282864-24282883 Msa0806270:three_prime_UTR 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr5_3:24284958-24284977 None:intergenic 50.0%
TTTCGCATCAAGGGACATCG+AGG - chr5_3:24284958-24284977 None:intergenic 50.0%
TACCTCTAACGGAGGAGTGG+TGG - chr5_3:24276035-24276054 None:intergenic 55.0%
! CAATAGTGTTGGGCGCAAGG+AGG - chr5_3:24278495-24278514 None:intergenic 55.0%
CTCCTTGCGCCCAACACTAT+TGG + chr5_3:24278493-24278512 Msa0806270:intron 55.0%
CGCACCAAGCCCAATAGTGT+TGG - chr5_3:24278506-24278525 None:intergenic 55.0%
AAACGCGATGCAGCGCTACA+AGG + chr5_3:24278641-24278660 Msa0806270:intron 55.0%
CGAGTGAAGCGGCCGATATT+CGG + chr5_3:24278682-24278701 Msa0806270:intron 55.0%
!! AATCGTACAATCGGTGCCGC+TGG + chr5_3:24278772-24278791 Msa0806270:intron 55.0%
!! TACAATCGGTGCCGCTGGAT+CGG + chr5_3:24278777-24278796 Msa0806270:intron 55.0%
!! GGAGGAGAATTTTGGAGGGG+AGG - chr5_3:24279333-24279352 None:intergenic 55.0%
GAGGGGGAAAGAACTGTGTG+AGG - chr5_3:24279813-24279832 None:intergenic 55.0%
AAGTAACCCGGGCATGACCA+TGG - chr5_3:24280177-24280196 None:intergenic 55.0%
CTCTTCCTCTGGTCATAGGC+TGG + chr5_3:24280216-24280235 Msa0806270:intron 55.0%
TCTGTCCAGCCTATGACCAG+AGG - chr5_3:24280224-24280243 None:intergenic 55.0%
ACAGGAGGATCCGGGCATTT+AGG + chr5_3:24280424-24280443 Msa0806270:intron 55.0%
CAGGAGGATCCGGGCATTTA+GGG + chr5_3:24280425-24280444 Msa0806270:intron 55.0%
GATCCGGGCATTTAGGGAGA+GGG + chr5_3:24280431-24280450 Msa0806270:intron 55.0%
ATCCGGGCATTTAGGGAGAG+GGG + chr5_3:24280432-24280451 Msa0806270:intron 55.0%
ATCCCCTCTCCCTAAATGCC+CGG - chr5_3:24280437-24280456 None:intergenic 55.0%
CACTGATGCATCTAGCGGTG+CGG - chr5_3:24282799-24282818 None:intergenic 55.0%
TTCGCATCAAGGGCCATCGA+GGG - chr5_3:24284634-24284653 None:intergenic 55.0%
TTTCGCATCAAGGGCCATCG+AGG - chr5_3:24284635-24284654 None:intergenic 55.0%
TTCGCATCAAGGGCCATCGA+GGG - chr5_3:24284634-24284653 None:intergenic 55.0%
TTTCGCATCAAGGGCCATCG+AGG - chr5_3:24284635-24284654 None:intergenic 55.0%
CACCACCACTCCTCCGTTAG+AGG + chr5_3:24276030-24276049 Msa0806270:five_prime_UTR 60.0%
! GCCCAATAGTGTTGGGCGCA+AGG - chr5_3:24278498-24278517 None:intergenic 60.0%
GCGCCCAACACTATTGGGCT+TGG + chr5_3:24278499-24278518 Msa0806270:intron 60.0%
GTGAAGCGGCCGATATTCGG+TGG + chr5_3:24278685-24278704 Msa0806270:intron 60.0%
CACCCCGCTCCACCGAATAT+CGG - chr5_3:24278697-24278716 None:intergenic 60.0%
TGGAGCGGGGTGGCCAAAAT+CGG + chr5_3:24278705-24278724 Msa0806270:intron 60.0%
! CGGCCGCTTAGACCCGATTT+TGG - chr5_3:24278721-24278740 None:intergenic 60.0%
! CGTAGCAGGCGCTATTTCGG+CGG - chr5_3:24278993-24279012 None:intergenic 60.0%
GCGCGTAGCAGGCGCTATTT+CGG - chr5_3:24278996-24279015 None:intergenic 60.0%
GATGGAAGGTCTTGGAGGGG+AGG + chr5_3:24279133-24279152 Msa0806270:intron 60.0%
!! CTTGGAGGGGAGGCGTCATT+AGG + chr5_3:24279143-24279162 Msa0806270:intron 60.0%
!! GCCCAACAAGTGGGCTGGAT+AGG + chr5_3:24280366-24280385 Msa0806270:intron 60.0%
GGATCCGGGCATTTAGGGAG+AGG + chr5_3:24280430-24280449 Msa0806270:intron 60.0%
GGGCATTTAGGGAGAGGGGA+TGG + chr5_3:24280436-24280455 Msa0806270:intron 60.0%
GGGAGAGGGGATGGAGAGAA+AGG + chr5_3:24280445-24280464 Msa0806270:intron 60.0%
TCTAGCGGTGCGGATGCAAG+TGG - chr5_3:24282789-24282808 None:intergenic 60.0%
CGCGATGCAGCGCTACAAGG+CGG + chr5_3:24278644-24278663 Msa0806270:intron 65.0%
TGCAGCGCTACAAGGCGGAG+CGG + chr5_3:24278649-24278668 Msa0806270:intron 65.0%
! GCGGCCGATATTCGGTGGAG+CGG + chr5_3:24278690-24278709 Msa0806270:intron 65.0%
! CGGCCGATATTCGGTGGAGC+GGG + chr5_3:24278691-24278710 Msa0806270:intron 65.0%
! GGCCGATATTCGGTGGAGCG+GGG + chr5_3:24278692-24278711 Msa0806270:intron 65.0%
! CGATATTCGGTGGAGCGGGG+TGG + chr5_3:24278695-24278714 Msa0806270:intron 65.0%
GGAGCGGGGTGGCCAAAATC+GGG + chr5_3:24278706-24278725 Msa0806270:intron 65.0%
CTGAAATGCAGCACGGCGCG+TGG - chr5_3:24279018-24279037 None:intergenic 65.0%
!! TGTTGGGCGTCGGCCCAAAC+TGG - chr5_3:24280354-24280373 None:intergenic 65.0%
TTGGGCCGACGCCCAACAAG+TGG + chr5_3:24280356-24280375 Msa0806270:intron 65.0%
TGGGCCGACGCCCAACAAGT+GGG + chr5_3:24280357-24280376 Msa0806270:intron 65.0%
! CCAGCCCACTTGTTGGGCGT+CGG - chr5_3:24280364-24280383 None:intergenic 65.0%
!! GCCATCTGGGAGCATCCCTC+TGG + chr5_3:24281410-24281429 Msa0806270:five_prime_UTR 65.0%
GCCAGAGGGATGCTCCCAGA+TGG - chr5_3:24281414-24281433 None:intergenic 65.0%
!! GGCCGCTACCGGTGCTATCG+CGG + chr5_3:24278601-24278620 Msa0806270:intron 70.0%
!! CGCCGCGATAGCACCGGTAG+CGG - chr5_3:24278606-24278625 None:intergenic 70.0%
!! CTACCGGTGCTATCGCGGCG+CGG + chr5_3:24278606-24278625 Msa0806270:intron 70.0%
GCGCTACAAGGCGGAGCGGT+TGG + chr5_3:24278653-24278672 Msa0806270:intron 70.0%
CCGACGCCCAACAAGTGGGC+TGG + chr5_3:24280361-24280380 Msa0806270:intron 70.0%
AGGCCGCGCCGCGATAGCAC+CGG - chr5_3:24278612-24278631 None:intergenic 75.0%
! CACGGCGCGTGGCGCGTAGC+AGG - chr5_3:24279007-24279026 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 24275833 24287950 24275833 ID=Msa0806270;Name=Msa0806270
chr5_3 mRNA 24275833 24287950 24275833 ID=Msa0806270-mRNA-1;Parent=Msa0806270;Name=Msa0806270-mRNA-1;_AED=0.14;_eAED=0.14;_QI=1063|1|1|1|0.53|0.42|14|639|164
chr5_3 exon 24275833 24275893 24275833 ID=Msa0806270-mRNA-1:exon:9365;Parent=Msa0806270-mRNA-1
chr5_3 exon 24275914 24276051 24275914 ID=Msa0806270-mRNA-1:exon:9366;Parent=Msa0806270-mRNA-1
chr5_3 exon 24276249 24276330 24276249 ID=Msa0806270-mRNA-1:exon:9367;Parent=Msa0806270-mRNA-1
chr5_3 exon 24276795 24276939 24276795 ID=Msa0806270-mRNA-1:exon:9368;Parent=Msa0806270-mRNA-1
chr5_3 exon 24277052 24277209 24277052 ID=Msa0806270-mRNA-1:exon:9369;Parent=Msa0806270-mRNA-1
chr5_3 exon 24281032 24281297 24281032 ID=Msa0806270-mRNA-1:exon:9370;Parent=Msa0806270-mRNA-1
chr5_3 exon 24281375 24281593 24281375 ID=Msa0806270-mRNA-1:exon:9371;Parent=Msa0806270-mRNA-1
chr5_3 exon 24281716 24281824 24281716 ID=Msa0806270-mRNA-1:exon:9372;Parent=Msa0806270-mRNA-1
chr5_3 exon 24281912 24282027 24281912 ID=Msa0806270-mRNA-1:exon:9373;Parent=Msa0806270-mRNA-1
chr5_3 exon 24282150 24282248 24282150 ID=Msa0806270-mRNA-1:exon:9374;Parent=Msa0806270-mRNA-1
chr5_3 exon 24282557 24282666 24282557 ID=Msa0806270-mRNA-1:exon:9375;Parent=Msa0806270-mRNA-1
chr5_3 exon 24282775 24282885 24282775 ID=Msa0806270-mRNA-1:exon:9376;Parent=Msa0806270-mRNA-1
chr5_3 exon 24283111 24283430 24283111 ID=Msa0806270-mRNA-1:exon:9377;Parent=Msa0806270-mRNA-1
chr5_3 exon 24287688 24287950 24287688 ID=Msa0806270-mRNA-1:exon:9378;Parent=Msa0806270-mRNA-1
chr5_3 five_prime_UTR 24275833 24275893 24275833 ID=Msa0806270-mRNA-1:five_prime_utr;Parent=Msa0806270-mRNA-1
chr5_3 five_prime_UTR 24275914 24276051 24275914 ID=Msa0806270-mRNA-1:five_prime_utr;Parent=Msa0806270-mRNA-1
chr5_3 five_prime_UTR 24276249 24276330 24276249 ID=Msa0806270-mRNA-1:five_prime_utr;Parent=Msa0806270-mRNA-1
chr5_3 five_prime_UTR 24276795 24276939 24276795 ID=Msa0806270-mRNA-1:five_prime_utr;Parent=Msa0806270-mRNA-1
chr5_3 five_prime_UTR 24277052 24277209 24277052 ID=Msa0806270-mRNA-1:five_prime_utr;Parent=Msa0806270-mRNA-1
chr5_3 five_prime_UTR 24281032 24281297 24281032 ID=Msa0806270-mRNA-1:five_prime_utr;Parent=Msa0806270-mRNA-1
chr5_3 five_prime_UTR 24281375 24281587 24281375 ID=Msa0806270-mRNA-1:five_prime_utr;Parent=Msa0806270-mRNA-1
chr5_3 CDS 24281588 24281593 24281588 ID=Msa0806270-mRNA-1:cds;Parent=Msa0806270-mRNA-1
chr5_3 CDS 24281716 24281824 24281716 ID=Msa0806270-mRNA-1:cds;Parent=Msa0806270-mRNA-1
chr5_3 CDS 24281912 24282027 24281912 ID=Msa0806270-mRNA-1:cds;Parent=Msa0806270-mRNA-1
chr5_3 CDS 24282150 24282248 24282150 ID=Msa0806270-mRNA-1:cds;Parent=Msa0806270-mRNA-1
chr5_3 CDS 24282557 24282666 24282557 ID=Msa0806270-mRNA-1:cds;Parent=Msa0806270-mRNA-1
chr5_3 CDS 24282775 24282829 24282775 ID=Msa0806270-mRNA-1:cds;Parent=Msa0806270-mRNA-1
chr5_3 three_prime_UTR 24282830 24282885 24282830 ID=Msa0806270-mRNA-1:three_prime_utr;Parent=Msa0806270-mRNA-1
chr5_3 three_prime_UTR 24283111 24283430 24283111 ID=Msa0806270-mRNA-1:three_prime_utr;Parent=Msa0806270-mRNA-1
chr5_3 three_prime_UTR 24287688 24287950 24287688 ID=Msa0806270-mRNA-1:three_prime_utr;Parent=Msa0806270-mRNA-1
Gene Sequence

>Msa0806270

ATGAAGGGAACTGTTGTGGAAGGCACCATACAGAAGTTGTTTGAAGGCCACCATATGAACTATATTGAATGCATGAATGTGGATTATAAATCAACAAGAAAAGAATCATTTTATGATCTTCAGCTTGATGTCAAAGGCTGTACAGATGTGTATGCTTCTTTTGATAAGTATGTGGAAGTAGAACAGCTTGAGGGTGATAACAAGTATCATGCAGAGCAGTATGGTTTACAGGAAGCAAGAAAGGGTGTATTGTTCATTGATTTTCCACCTGTTCTTCAGCTTCAGTTAAAACGGTTTGAGTATGATTTTGCGCGAGACACTATGGTAAAGATCAATGACCGCTATGAGTTCCCCTTACAATTAGATCTTGATAGGGATAATGGGAAGTATCTATCTCCTAACGCAGATAGAAGTATTCGCAACCTTTATACACTTCACAGTTGTTACAGAACCACTTGCATCCGCACCGCTAGATGCATCAGTGTCAAGTTTTGA
Protein sequence

>Msa0806270

MKGTVVEGTIQKLFEGHHMNYIECMNVDYKSTRKESFYDLQLDVKGCTDVYASFDKYVEVEQLEGDNKYHAEQYGLQEARKGVLFIDFPPVLQLQLKRFEYDFARDTMVKINDRYEFPLQLDLDRDNGKYLSPNADRSIRNLYTLHSCYRTTCIRTARCISVKF*