Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018100 | XP_013448483.1 | 92.466 | 292 | 15 | 1 | 1 | 292 | 1 | 285 | 0.0 | 530 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018100 | sp|F4JIP6|LPXD2_ARATH | 67.059 | 255 | 80 | 1 | 36 | 286 | 42 | 296 | 4.80e-121 | 351 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018100 | A2Q2M3 | 92.466 | 292 | 15 | 1 | 1 | 292 | 1 | 285 | 0.0 | 530 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001240 | Msa1018100 | 0.811315 | 7.446662e-51 | -8.615850e-47 |
| Msa0011170 | Msa1018100 | 0.805205 | 1.493337e-49 | -8.615850e-47 |
| Msa0020930 | Msa1018100 | 0.832803 | 7.672577e-56 | -8.615850e-47 |
| Msa0034110 | Msa1018100 | 0.823904 | 1.077406e-53 | -8.615850e-47 |
| Msa0044260 | Msa1018100 | 0.806866 | 6.680369e-50 | -8.615850e-47 |
| Msa0068680 | Msa1018100 | 0.821691 | 3.528856e-53 | -8.615850e-47 |
| Msa0077610 | Msa1018100 | 0.807582 | 4.710466e-50 | -8.615850e-47 |
| Msa0114060 | Msa1018100 | 0.823000 | 1.753099e-53 | -8.615850e-47 |
| Msa0119960 | Msa1018100 | 0.800237 | 1.583388e-48 | -8.615850e-47 |
| Msa0616160 | Msa1018100 | 0.806867 | 6.676275e-50 | -8.615850e-47 |
| Msa0621490 | Msa1018100 | 0.821884 | 3.184562e-53 | -8.615850e-47 |
| Msa0657970 | Msa1018100 | 0.804642 | 1.958402e-49 | -8.615850e-47 |
| Msa0688480 | Msa1018100 | 0.806879 | 6.639538e-50 | -8.615850e-47 |
| Msa0697390 | Msa1018100 | 0.824751 | 6.810585e-54 | -8.615850e-47 |
| Msa0698400 | Msa1018100 | 0.809428 | 1.901597e-50 | -8.615850e-47 |
| Msa0796700 | Msa1018100 | 0.808100 | 3.655266e-50 | -8.615850e-47 |
| Msa0806250 | Msa1018100 | 0.809568 | 1.774742e-50 | -8.615850e-47 |
| Msa0824960 | Msa1018100 | 0.802617 | 5.153951e-49 | -8.615850e-47 |
| Msa0157310 | Msa1018100 | 0.803355 | 3.627321e-49 | -8.615850e-47 |
| Msa0159930 | Msa1018100 | 0.811875 | 5.626253e-51 | -8.615850e-47 |
| Msa0174110 | Msa1018100 | 0.816835 | 4.506380e-52 | -8.615850e-47 |
| Msa0179580 | Msa1018100 | 0.819080 | 1.401015e-52 | -8.615850e-47 |
| Msa0188900 | Msa1018100 | 0.811536 | 6.665577e-51 | -8.615850e-47 |
| Msa0189320 | Msa1018100 | 0.814911 | 1.210162e-51 | -8.615850e-47 |
| Msa0211110 | Msa1018100 | 0.802366 | 5.804086e-49 | -8.615850e-47 |
| Msa0220580 | Msa1018100 | 0.811206 | 7.860980e-51 | -8.615850e-47 |
| Msa0231370 | Msa1018100 | 0.802020 | 6.840146e-49 | -8.615850e-47 |
| Msa0392400 | Msa1018100 | 0.815515 | 8.888059e-52 | -8.615850e-47 |
| Msa0392440 | Msa1018100 | 0.807544 | 4.800338e-50 | -8.615850e-47 |
| Msa0424790 | Msa1018100 | 0.804554 | 2.043447e-49 | -8.615850e-47 |
| Msa0428080 | Msa1018100 | 0.809124 | 2.209188e-50 | -8.615850e-47 |
| Msa0432300 | Msa1018100 | 0.804285 | 2.324924e-49 | -8.615850e-47 |
| Msa0440750 | Msa1018100 | 0.818007 | 2.453299e-52 | -8.615850e-47 |
| Msa0981590 | Msa1018100 | 0.819515 | 1.115428e-52 | -8.615850e-47 |
| Msa1014540 | Msa1018100 | 0.803593 | 3.237706e-49 | -8.615850e-47 |
| Msa1018100 | Msa1018980 | 0.811200 | 7.886676e-51 | -8.615850e-47 |
| Msa1018100 | Msa1082500 | 0.822503 | 2.287503e-53 | -8.615850e-47 |
| Msa1018100 | Msa1124960 | 0.804646 | 1.955156e-49 | -8.615850e-47 |
| Msa1018100 | Msa1128060 | 0.805097 | 1.573849e-49 | -8.615850e-47 |
| Msa1018100 | Msa1147710 | 0.802243 | 6.152202e-49 | -8.615850e-47 |
| Msa1018100 | Msa1162270 | 0.807762 | 4.314472e-50 | -8.615850e-47 |
| Msa1018100 | Msa1170410 | 0.807973 | 3.890483e-50 | -8.615850e-47 |
| Msa1018100 | Msa1203250 | 0.812091 | 5.047362e-51 | -8.615850e-47 |
| Msa1018100 | Msa1246510 | 0.807832 | 4.169572e-50 | -8.615850e-47 |
| Msa1018100 | Msa1270610 | 0.803943 | 2.738712e-49 | -8.615850e-47 |
| Msa1018100 | Msa1331000 | 0.804288 | 2.321399e-49 | -8.615850e-47 |
| Msa1018100 | Msa1411020 | 0.811996 | 5.294194e-51 | -8.615850e-47 |
| Msa1018100 | Msa1424290 | 0.813845 | 2.082861e-51 | -8.615850e-47 |
| Msa1018100 | Msa1426030 | 0.814963 | 1.178663e-51 | -8.615850e-47 |
| Msa1018100 | Msa1434350 | 0.812146 | 4.910495e-51 | -8.615850e-47 |
| Msa1018100 | Msa1439320 | 0.813254 | 2.809215e-51 | -8.615850e-47 |
| Msa1018100 | Msa1440810 | 0.801607 | 8.315375e-49 | -8.615850e-47 |
| Msa1018100 | Msa1460020 | 0.802512 | 5.416210e-49 | -8.615850e-47 |
| Msa1018100 | Msa1460050 | 0.832351 | 9.932847e-56 | -8.615850e-47 |
| Msa1018100 | Msa1464900 | 0.806772 | 6.992402e-50 | -8.615850e-47 |
| Msa0265380 | Msa1018100 | 0.809398 | 1.930353e-50 | -8.615850e-47 |
| Msa0280090 | Msa1018100 | 0.808743 | 2.666193e-50 | -8.615850e-47 |
| Msa0285670 | Msa1018100 | 0.807358 | 5.256611e-50 | -8.615850e-47 |
| Msa0289510 | Msa1018100 | 0.831266 | 1.839958e-55 | -8.615850e-47 |
| Msa0303360 | Msa1018100 | 0.806476 | 8.076904e-50 | -8.615850e-47 |
| Msa0309770 | Msa1018100 | 0.841889 | 3.613212e-58 | -8.615850e-47 |
| Msa0345970 | Msa1018100 | 0.826141 | 3.192776e-54 | -8.615850e-47 |
| Msa0487550 | Msa1018100 | 0.800680 | 1.286693e-48 | -8.615850e-47 |
| Msa0515010 | Msa1018100 | 0.802924 | 4.453465e-49 | -8.615850e-47 |
| Msa0532060 | Msa1018100 | 0.834606 | 2.720287e-56 | -8.615850e-47 |
| Msa0532170 | Msa1018100 | 0.834463 | 2.953738e-56 | -8.615850e-47 |
| Msa0596800 | Msa1018100 | 0.806821 | 6.829428e-50 | -8.615850e-47 |
| Msa0602390 | Msa1018100 | 0.809738 | 1.631537e-50 | -8.615850e-47 |
| Msa0871270 | Msa1018100 | 0.813784 | 2.147785e-51 | -8.615850e-47 |
| Msa0895120 | Msa1018100 | 0.824911 | 6.243514e-54 | -8.615850e-47 |
| Msa0918220 | Msa1018100 | 0.810076 | 1.379789e-50 | -8.615850e-47 |
| Msa0935670 | Msa1018100 | 0.805764 | 1.140148e-49 | -8.615850e-47 |
| Msa0938220 | Msa1018100 | 0.818373 | 2.027732e-52 | -8.615850e-47 |
| Msa0945970 | Msa1018100 | 0.820165 | 7.922646e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018100 | MtrunA17_Chr7g0233641 | 92.466 | 292 | 15 | 1 | 1 | 292 | 1 | 285 | 0.0 | 530 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018100 | AT4G05210.2 | 69.512 | 246 | 67 | 1 | 41 | 286 | 48 | 285 | 5.08e-124 | 356 |
| Msa1018100 | AT4G05210.3 | 73.128 | 227 | 61 | 0 | 60 | 286 | 77 | 303 | 4.08e-123 | 354 |
| Msa1018100 | AT4G21220.1 | 67.059 | 255 | 80 | 1 | 36 | 286 | 42 | 296 | 4.88e-122 | 351 |
| Msa1018100 | AT4G05210.1 | 65.462 | 249 | 55 | 2 | 63 | 286 | 80 | 322 | 5.68e-112 | 327 |
Find 100 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCTCATTCAACGATAAT+TGG | 0.126270 | 7_1:-37937584 | Msa1018100:CDS |
| TCAAGATCAGAGGATAATTT+TGG | 0.162212 | 7_1:-37937782 | Msa1018100:intron |
| AGCAATCTTCTAATAATATT+TGG | 0.203658 | 7_1:-37938126 | Msa1018100:five_prime_UTR |
| GGAAGTGATTCCGGTGATTA+TGG | 0.212429 | 7_1:+37938795 | None:intergenic |
| AAGCTTGGATACTGGGTAAT+TGG | 0.231336 | 7_1:+37938091 | None:intergenic |
| AGCTGGAGAGATACATTTAT+TGG | 0.239574 | 7_1:-37935566 | Msa1018100:CDS |
| ATTGGCCACAATGTAGTTAT+TGG | 0.252137 | 7_1:-37935433 | Msa1018100:CDS |
| ATTCCCGCGAGTTGGGTTTC+TGG | 0.263405 | 7_1:+37938832 | None:intergenic |
| TGTGGACAAGTTGGGATTGC+AGG | 0.275865 | 7_1:-37935394 | Msa1018100:CDS |
| ATCACAGAACCTGGAGATTA+TGG | 0.315331 | 7_1:-37934635 | Msa1018100:CDS |
| ATACTTACATATACATTAAA+AGG | 0.324291 | 7_1:+37938906 | None:intergenic |
| TCAAATGTTCGTATTGGTTC+CGG | 0.350732 | 7_1:-37937632 | Msa1018100:CDS |
| ACTACTTCTTCTTCTTGTTC+CGG | 0.351569 | 7_1:-37937905 | Msa1018100:intron |
| CAGAAGCTCAATGTAATAGT+AGG | 0.355997 | 7_1:-37935945 | Msa1018100:CDS |
| TTCTGGCAAGCCACTGGAAT+CGG | 0.366979 | 7_1:+37938849 | None:intergenic |
| GTAGGGAACAATGTGGAAAT+TGG | 0.367733 | 7_1:-37935927 | Msa1018100:CDS |
| TGTTGGAGCTATTGTTCATT+CGG | 0.368691 | 7_1:-37937669 | Msa1018100:CDS |
| GAAGATAGATAATTTAGTTC+AGG | 0.370626 | 7_1:-37935534 | Msa1018100:intron |
| GCTGGAGAGATACATTTATT+GGG | 0.371063 | 7_1:-37935565 | Msa1018100:CDS |
| TTGGCCACAATGTAGTTATT+GGG | 0.373724 | 7_1:-37935432 | Msa1018100:CDS |
| ATTGAGTGTGATTGAGAAAA+GGG | 0.377757 | 7_1:+37937975 | None:intergenic |
| AGTCAATACAAGCTGATTCA+TGG | 0.378580 | 7_1:+37937708 | None:intergenic |
| GCCATTGTCATCGTTCACTA+TGG | 0.382657 | 7_1:+37938049 | None:intergenic |
| GCTCCGATAAGCTTGGATAC+TGG | 0.383927 | 7_1:+37938083 | None:intergenic |
| GAAGTGATTCCGGTGATTAT+GGG | 0.391062 | 7_1:+37938796 | None:intergenic |
| GAAAACCAGCATTACCATCT+TGG | 0.393680 | 7_1:+37936430 | None:intergenic |
| GTTCATTCGGGATCTGTTGT+TGG | 0.393972 | 7_1:-37937656 | Msa1018100:CDS |
| GTTGGAGCTATTGTTCATTC+GGG | 0.400498 | 7_1:-37937668 | Msa1018100:CDS |
| GGAAGTGATTCCCGCGAGTT+GGG | 0.414860 | 7_1:+37938825 | None:intergenic |
| ATTGGTTCCGGAACTGTGAT+TGG | 0.416082 | 7_1:-37937620 | Msa1018100:CDS |
| TCACTTAGTAATTGCAGTAT+AGG | 0.425405 | 7_1:-37936489 | Msa1018100:CDS |
| CGTTCACTATGGAGAAGATC+GGG | 0.426444 | 7_1:+37938060 | None:intergenic |
| CTCCGATAAGCTTGGATACT+GGG | 0.428173 | 7_1:+37938084 | None:intergenic |
| GTTGGTTCAAATGTTCGTAT+TGG | 0.436861 | 7_1:-37937638 | Msa1018100:CDS |
| ATTTCAATCTTGCAATGTAA+TGG | 0.441872 | 7_1:+37934330 | None:intergenic |
| TACCCAGTATCCAAGCTTAT+CGG | 0.446479 | 7_1:-37938086 | Msa1018100:five_prime_UTR |
| TTGCTCATTCAACGATAATT+GGG | 0.448245 | 7_1:-37937583 | Msa1018100:intron |
| ATATGTAAGTATTTATGTAA+TGG | 0.452508 | 7_1:-37938895 | Msa1018100:five_prime_UTR |
| TCCAGGTTCTGTGATGTCCT+TGG | 0.461823 | 7_1:+37934643 | None:intergenic |
| TTGGGTTTCTGGCAAGCCAC+TGG | 0.462913 | 7_1:+37938843 | None:intergenic |
| GTGCAAATACATGCATTGAC+AGG | 0.462960 | 7_1:-37935905 | Msa1018100:CDS |
| GCTGATGGAGGAAGTGATTC+CGG | 0.465925 | 7_1:+37938786 | None:intergenic |
| TCTGGCAAGCCACTGGAATC+GGG | 0.468973 | 7_1:+37938850 | None:intergenic |
| ATTATGTGACGATGGGAGGA+AGG | 0.470760 | 7_1:-37935233 | Msa1018100:CDS |
| TGTAGGTTTCTATTCACAAA+TGG | 0.471353 | 7_1:-37934473 | Msa1018100:intron |
| GGGAAGAATTGCATGCTTTG+TGG | 0.489093 | 7_1:-37935412 | Msa1018100:CDS |
| GCATGCTTTGTGGACAAGTT+GGG | 0.495459 | 7_1:-37935402 | Msa1018100:CDS |
| ACCAAGGACATCACAGAACC+TGG | 0.502358 | 7_1:-37934644 | Msa1018100:CDS |
| CAATCTTGCAATGTAATGGT+CGG | 0.509839 | 7_1:+37934334 | None:intergenic |
| TGAATTATTTGTGTTCCATA+CGG | 0.510151 | 7_1:-37934294 | Msa1018100:three_prime_UTR |
| TCCTCTAACTGCAAAACTGC+TGG | 0.516609 | 7_1:+37934437 | None:intergenic |
| TCATGTATCGATTGCATCAA+AGG | 0.517806 | 7_1:-37935196 | Msa1018100:intron |
| TATTGAGTGTGATTGAGAAA+AGG | 0.518335 | 7_1:+37937974 | None:intergenic |
| TGCATGCTTTGTGGACAAGT+TGG | 0.519011 | 7_1:-37935403 | Msa1018100:CDS |
| AGGAAGTGATTCCCGCGAGT+TGG | 0.526595 | 7_1:+37938824 | None:intergenic |
| AGAGGGGAAGAGTGAGCTGA+TGG | 0.526912 | 7_1:+37938771 | None:intergenic |
| GGGGAAGAGTGAGCTGATGG+AGG | 0.528436 | 7_1:+37938774 | None:intergenic |
| GTACAACATAATTTCTTACA+TGG | 0.529007 | 7_1:-37934257 | Msa1018100:three_prime_UTR |
| CATATAATGTGTAAACCGTA+TGG | 0.530070 | 7_1:+37934279 | None:intergenic |
| AGAAGGTCCAATCACAGTTC+CGG | 0.533227 | 7_1:+37937613 | None:intergenic |
| ATACATGCATTGACAGGGGC+AGG | 0.537225 | 7_1:-37935899 | Msa1018100:intron |
| TCGTTCACTATGGAGAAGAT+CGG | 0.539655 | 7_1:+37938059 | None:intergenic |
| CTCTTGTTATCAAATAAGTA+AGG | 0.543483 | 7_1:-37938745 | Msa1018100:intron |
| GATCGGGGCTCCGATAAGCT+TGG | 0.547077 | 7_1:+37938076 | None:intergenic |
| AGAAGCTCAATGTAATAGTA+GGG | 0.553263 | 7_1:-37935944 | Msa1018100:CDS |
| GAAGAAGTAGTAGAGAAATG+AGG | 0.553809 | 7_1:+37937917 | None:intergenic |
| GGAGTCTGCATCGGCCAAGA+TGG | 0.554140 | 7_1:-37936444 | Msa1018100:intron |
| GGAAAGCCACCATAATCTCC+AGG | 0.557434 | 7_1:+37934626 | None:intergenic |
| TGCAAATACATGCATTGACA+GGG | 0.560693 | 7_1:-37935904 | Msa1018100:CDS |
| AAGTGATTCCGGTGATTATG+GGG | 0.567478 | 7_1:+37938797 | None:intergenic |
| TTGCCAGAAACCCAACTCGC+GGG | 0.571612 | 7_1:-37938835 | Msa1018100:five_prime_UTR |
| GGAGATTATGTGACGATGGG+AGG | 0.576832 | 7_1:-37935237 | Msa1018100:CDS |
| TTTGATAACAAGAGACGAGA+GGG | 0.576877 | 7_1:+37938754 | None:intergenic |
| ATCAGCTTGTATTGACTCAA+CGG | 0.577465 | 7_1:-37937702 | Msa1018100:CDS |
| CATAGGAGATTATGTGACGA+TGG | 0.588173 | 7_1:-37935241 | Msa1018100:CDS |
| TTATGTGACGATGGGAGGAA+GGG | 0.590326 | 7_1:-37935232 | Msa1018100:CDS |
| AGGTTTCTATTCACAAATGG+CGG | 0.594531 | 7_1:-37934470 | Msa1018100:CDS |
| TGTTGAAGTTGAACGAACAA+AGG | 0.594744 | 7_1:+37938000 | None:intergenic |
| ATAGGAGATTATGTGACGAT+GGG | 0.605328 | 7_1:-37935240 | Msa1018100:CDS |
| GAAGCTTGTCCCGATTCCAG+TGG | 0.606912 | 7_1:-37938859 | Msa1018100:five_prime_UTR |
| CTGGAGAGATACATTTATTG+GGG | 0.609991 | 7_1:-37935564 | Msa1018100:CDS |
| ATTCACAATGGAGTCTGCAT+CGG | 0.617437 | 7_1:-37936453 | Msa1018100:CDS |
| CTTGCCAGAAACCCAACTCG+CGG | 0.628683 | 7_1:-37938836 | Msa1018100:five_prime_UTR |
| TGCGTTAAGTTGTGTAACCA+AGG | 0.629797 | 7_1:-37934660 | Msa1018100:CDS |
| GGGCTAAAGAGATATTGAGG+GGG | 0.632559 | 7_1:-37938156 | Msa1018100:five_prime_UTR |
| GGGGCTAAAGAGATATTGAG+GGG | 0.635239 | 7_1:-37938157 | Msa1018100:five_prime_UTR |
| GAATGAGCAATAGAAACAGA+AGG | 0.635454 | 7_1:+37937596 | None:intergenic |
| TAACATGATAAAGAAGCCAC+AGG | 0.643538 | 7_1:-37936089 | Msa1018100:intron |
| TCCATAGTGAACGATGACAA+TGG | 0.647356 | 7_1:-37938050 | Msa1018100:exon |
| TCTTCCCAATAACTACATTG+TGG | 0.648401 | 7_1:+37935428 | None:intergenic |
| TTGAGTGTGATTGAGAAAAG+GGG | 0.651941 | 7_1:+37937976 | None:intergenic |
| ATTTGATAACAAGAGACGAG+AGG | 0.655276 | 7_1:+37938753 | None:intergenic |
| TTGATAACAAGAGACGAGAG+GGG | 0.664130 | 7_1:+37938755 | None:intergenic |
| TTAAATTTATCATCACTGAG+AGG | 0.667137 | 7_1:+37937758 | None:intergenic |
| ACAGAACCTGGAGATTATGG+TGG | 0.680720 | 7_1:-37934632 | Msa1018100:CDS |
| AGTGATTCCGGTGATTATGG+GGG | 0.689929 | 7_1:+37938798 | None:intergenic |
| GATTCATGTGTAATTCACAA+TGG | 0.714443 | 7_1:-37936465 | Msa1018100:CDS |
| TGTAATAGTAGGGAACAATG+TGG | 0.718516 | 7_1:-37935934 | Msa1018100:CDS |
| GCAAATACATGCATTGACAG+GGG | 0.723551 | 7_1:-37935903 | Msa1018100:CDS |
| GTTCACTATGGAGAAGATCG+GGG | 0.729092 | 7_1:+37938061 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATTAAAAAGAAAGAA+AGG | + | chr7_1:37935325-37935344 | None:intergenic | 10.0% |
| !! | AAATTTAAAAAATGGAAAAA+TGG | - | chr7_1:37935426-37935445 | Msa1018100:CDS | 10.0% |
| !! | TAATATTTATTATATTACCT+TGG | - | chr7_1:37935700-37935719 | Msa1018100:intron | 10.0% |
| !! | AGTATAAATAAATAAATAAC+CGG | + | chr7_1:37936130-37936149 | None:intergenic | 10.0% |
| !! | TATTTATTTATACTTTACAT+TGG | - | chr7_1:37936136-37936155 | Msa1018100:intron | 10.0% |
| !! | ATACTTACATATACATTAAA+AGG | + | chr7_1:37934266-37934285 | None:intergenic | 15.0% |
| !! | ATATGTAAGTATTTATGTAA+TGG | - | chr7_1:37934274-37934293 | Msa1018100:three_prime_UTR | 15.0% |
| !!! | AAATTTTTTTTTTAAGCTTC+CGG | + | chr7_1:37934818-37934837 | None:intergenic | 15.0% |
| !! | AAAAATGAAAATTAACTTAC+CGG | + | chr7_1:37935286-37935305 | None:intergenic | 15.0% |
| !! | GTGATGATAAATTTAAAAAA+TGG | - | chr7_1:37935418-37935437 | Msa1018100:CDS | 15.0% |
| !! | AGTGAAATTCAATAAATAAA+TGG | + | chr7_1:37935735-37935754 | None:intergenic | 15.0% |
| !! | TTAAATTTGATACATTAAGA+GGG | + | chr7_1:37935917-37935936 | None:intergenic | 15.0% |
| !! | TTTAAATTTGATACATTAAG+AGG | + | chr7_1:37935918-37935937 | None:intergenic | 15.0% |
| !! | TTAAGTGTAATTATATATGT+TGG | + | chr7_1:37936301-37936320 | None:intergenic | 15.0% |
| !! | TTATTTGTAATTATGTATAG+AGG | - | chr7_1:37936525-37936544 | Msa1018100:intron | 15.0% |
| !!! | TATTTTTACTGTTTGTAAAT+TGG | - | chr7_1:37938429-37938448 | Msa1018100:intron | 15.0% |
| !!! | ATTTTTACTGTTTGTAAATT+GGG | - | chr7_1:37938430-37938449 | Msa1018100:intron | 15.0% |
| !! | AAATTTGAAAAATGTTCATC+CGG | - | chr7_1:37934832-37934851 | Msa1018100:intron | 20.0% |
| !! | AGCAATCTTCTAATAATATT+TGG | - | chr7_1:37935043-37935062 | Msa1018100:intron | 20.0% |
| !! | TTTAAAAAATGGAAAAATGG+TGG | - | chr7_1:37935429-37935448 | Msa1018100:CDS | 20.0% |
| !!! | TCGTAATTTTAATACATTCA+AGG | - | chr7_1:37936056-37936075 | Msa1018100:intron | 20.0% |
| !! | TATACTTTACATTGGAAATA+TGG | - | chr7_1:37936144-37936163 | Msa1018100:intron | 20.0% |
| !!! | ATTGGAAATATGGTTTTAAA+TGG | - | chr7_1:37936154-37936173 | Msa1018100:intron | 20.0% |
| !! | TATGATTCTTTGCAATATTT+AGG | + | chr7_1:37936201-37936220 | None:intergenic | 20.0% |
| !! | AATTTGTAATTGTATTGAAG+AGG | - | chr7_1:37936621-37936640 | Msa1018100:intron | 20.0% |
| !!! | TGCTTGTTTTTTAATAGTTA+AGG | - | chr7_1:37936768-37936787 | Msa1018100:intron | 20.0% |
| !! | CACAAAATACATATTATATG+TGG | - | chr7_1:37936885-37936904 | Msa1018100:intron | 20.0% |
| !! | AAGAAACTTTCAACATATAT+AGG | + | chr7_1:37937136-37937155 | None:intergenic | 20.0% |
| !!! | GTTTAACAATAATTTTCAAC+TGG | - | chr7_1:37937159-37937178 | Msa1018100:intron | 20.0% |
| !! | ATTAGTTAGAAAATTACAAG+AGG | - | chr7_1:37937387-37937406 | Msa1018100:intron | 20.0% |
| !! | AACTAATTATATTCACTCAT+TGG | - | chr7_1:37937574-37937593 | Msa1018100:intron | 20.0% |
| !!! | TGTTGTTATGTAGTAAATTT+TGG | - | chr7_1:37937828-37937847 | Msa1018100:intron | 20.0% |
| !!! | GTTGTTATGTAGTAAATTTT+GGG | - | chr7_1:37937829-37937848 | Msa1018100:intron | 20.0% |
| !! | ATATCAAACTATAATGATCT+TGG | - | chr7_1:37938094-37938113 | Msa1018100:five_prime_UTR | 20.0% |
| !! | TTAAAGATTTGAAAGACATT+GGG | - | chr7_1:37938131-37938150 | Msa1018100:five_prime_UTR | 20.0% |
| !!! | ATGTTTTTTTTTTTGACTAG+AGG | - | chr7_1:37938163-37938182 | Msa1018100:intron | 20.0% |
| !! | CTCTTGTTATCAAATAAGTA+AGG | - | chr7_1:37934424-37934443 | Msa1018100:exon | 25.0% |
| !! | TTCTCCAATTGATTGATTTA+GGG | - | chr7_1:37934478-37934497 | Msa1018100:intron | 25.0% |
| ! | AAGCAAAGTGAGTTAAAAAT+GGG | + | chr7_1:37934558-37934577 | None:intergenic | 25.0% |
| ! | TAAGCAAAGTGAGTTAAAAA+TGG | + | chr7_1:37934559-37934578 | None:intergenic | 25.0% |
| ! | TATACTAGCTACTTGTAATA+CGG | - | chr7_1:37934782-37934801 | Msa1018100:intron | 25.0% |
| !!! | GAATTTGCAATTTTAACTTC+CGG | + | chr7_1:37934868-37934887 | None:intergenic | 25.0% |
| ! | TAAAAATACGAAATTAACCC+TGG | + | chr7_1:37934990-37935009 | None:intergenic | 25.0% |
| !! | AGGGTTAATTTCGTATTTTT+AGG | - | chr7_1:37934989-37935008 | Msa1018100:intron | 25.0% |
| !!! | GGGTTAATTTCGTATTTTTA+GGG | - | chr7_1:37934990-37935009 | Msa1018100:intron | 25.0% |
| !!! | GGTTAATTTCGTATTTTTAG+GGG | - | chr7_1:37934991-37935010 | Msa1018100:intron | 25.0% |
| !!! | GTTAATTTCGTATTTTTAGG+GGG | - | chr7_1:37934992-37935011 | Msa1018100:intron | 25.0% |
| !!! | TTAATTTCGTATTTTTAGGG+GGG | - | chr7_1:37934993-37935012 | Msa1018100:intron | 25.0% |
| !! | AAAGGAAACTAATTTTCTTC+TGG | + | chr7_1:37935154-37935173 | None:intergenic | 25.0% |
| ! | TTAAATTTATCATCACTGAG+AGG | + | chr7_1:37935414-37935433 | None:intergenic | 25.0% |
| !!! | ATTTTGCTTTTCAATGTGAT+AGG | - | chr7_1:37935665-37935684 | Msa1018100:intron | 25.0% |
| ! | ATAAATGGTATATTAGTCCA+AGG | + | chr7_1:37935720-37935739 | None:intergenic | 25.0% |
| ! | ACAAACAGAAGATATATTCA+AGG | - | chr7_1:37935958-37935977 | Msa1018100:intron | 25.0% |
| !!! | ATTTTGAGAAACAAACTAAC+TGG | - | chr7_1:37936005-37936024 | Msa1018100:intron | 25.0% |
| ! | GTAATTATATATGTTGGTGT+CGG | + | chr7_1:37936295-37936314 | None:intergenic | 25.0% |
| !! | AGACAATATATTTTCGATCA+AGG | + | chr7_1:37936499-37936518 | None:intergenic | 25.0% |
| ! | AATACAATGCACTAATGTTA+CGG | + | chr7_1:37937022-37937041 | None:intergenic | 25.0% |
| ! | ATCATGAAGCTAAATAGAAA+AGG | + | chr7_1:37937318-37937337 | None:intergenic | 25.0% |
| ! | TCAAAAAATGTATGAGTGAA+AGG | - | chr7_1:37937341-37937360 | Msa1018100:intron | 25.0% |
| !! | GAAGATAGATAATTTAGTTC+AGG | - | chr7_1:37937635-37937654 | Msa1018100:CDS | 25.0% |
| !!! | AAATTTTGGGATGATATATC+TGG | - | chr7_1:37937842-37937861 | Msa1018100:intron | 25.0% |
| ! | TTGATTAGCGAATGAATAAT+TGG | - | chr7_1:37938037-37938056 | Msa1018100:CDS | 25.0% |
| ! | GTTAAAGATTTGAAAGACAT+TGG | - | chr7_1:37938130-37938149 | Msa1018100:five_prime_UTR | 25.0% |
| ! | TATGAAAAGAGCTAAATTTC+AGG | + | chr7_1:37938209-37938228 | None:intergenic | 25.0% |
| ! | TCAATTGATCATTTGAATAG+CGG | + | chr7_1:37938380-37938399 | None:intergenic | 25.0% |
| ! | ATTTCAATCTTGCAATGTAA+TGG | + | chr7_1:37938842-37938861 | None:intergenic | 25.0% |
| ! | TGAATTATTTGTGTTCCATA+CGG | - | chr7_1:37938875-37938894 | Msa1018100:five_prime_UTR | 25.0% |
| ! | GTACAACATAATTTCTTACA+TGG | - | chr7_1:37938912-37938931 | Msa1018100:five_prime_UTR | 25.0% |
| CTAAATCAATCAATTGGAGA+AGG | + | chr7_1:37934479-37934498 | None:intergenic | 30.0% | |
| ! | CTTCTCCAATTGATTGATTT+AGG | - | chr7_1:37934477-37934496 | Msa1018100:intron | 30.0% |
| GAAACCCTAAATCAATCAAT+TGG | + | chr7_1:37934485-37934504 | None:intergenic | 30.0% | |
| ! | TTGATTTAGGGTTTCAGAAT+TGG | - | chr7_1:37934490-37934509 | Msa1018100:intron | 30.0% |
| ! | TGATTTAGGGTTTCAGAATT+GGG | - | chr7_1:37934491-37934510 | Msa1018100:intron | 30.0% |
| TGAACAAAAACATGATAAGC+AGG | + | chr7_1:37934631-37934650 | None:intergenic | 30.0% | |
| TATCAATGCATATAGTAAGC+AGG | - | chr7_1:37934711-37934730 | Msa1018100:intron | 30.0% | |
| GTAATACGGTATGTATATAC+CGG | - | chr7_1:37934796-37934815 | Msa1018100:intron | 30.0% | |
| ! | AACTACCAGATTTTATGTAC+CGG | - | chr7_1:37934945-37934964 | Msa1018100:intron | 30.0% |
| TACTTAAAAACTTGAACCTC+CGG | + | chr7_1:37934967-37934986 | None:intergenic | 30.0% | |
| !!! | GTTCAAGTTTTTAAGTACCA+GGG | - | chr7_1:37934970-37934989 | Msa1018100:intron | 30.0% |
| ATTGAGTGTGATTGAGAAAA+GGG | + | chr7_1:37935197-37935216 | None:intergenic | 30.0% | |
| TATTGAGTGTGATTGAGAAA+AGG | + | chr7_1:37935198-37935217 | None:intergenic | 30.0% | |
| ! | TCAAGATCAGAGGATAATTT+TGG | - | chr7_1:37935387-37935406 | Msa1018100:CDS | 30.0% |
| AAAAAATGGAAAAATGGTGG+TGG | - | chr7_1:37935432-37935451 | Msa1018100:CDS | 30.0% | |
| ATTGCTCATTCAACGATAAT+TGG | - | chr7_1:37935585-37935604 | Msa1018100:intron | 30.0% | |
| TTGCTCATTCAACGATAATT+GGG | - | chr7_1:37935586-37935605 | Msa1018100:intron | 30.0% | |
| TATGCAAAAACAAAAGTGAG+AGG | + | chr7_1:37935635-37935654 | None:intergenic | 30.0% | |
| !!! | CTCACTTTTGTTTTTGCATA+AGG | - | chr7_1:37935635-37935654 | Msa1018100:intron | 30.0% |
| TTATTCCAGGAGTAATTAAG+TGG | + | chr7_1:37935758-37935777 | None:intergenic | 30.0% | |
| CTTAATTACTCCTGGAATAA+TGG | - | chr7_1:37935758-37935777 | Msa1018100:intron | 30.0% | |
| ATTGAATCAACTCAACTGAT+CGG | - | chr7_1:37935801-37935820 | Msa1018100:intron | 30.0% | |
| ! | ATTCAAGGAGTATAATGACA+TGG | - | chr7_1:37936071-37936090 | Msa1018100:intron | 30.0% |
| ! | TTCAAGGAGTATAATGACAT+GGG | - | chr7_1:37936072-37936091 | Msa1018100:intron | 30.0% |
| !!! | GGAAATATGGTTTTAAATGG+TGG | - | chr7_1:37936157-37936176 | Msa1018100:intron | 30.0% |
| TCTCAAATTATTAGCAGTGT+CGG | - | chr7_1:37936331-37936350 | Msa1018100:intron | 30.0% | |
| ! | ACAAGTTTTCAGACATAAAC+AGG | + | chr7_1:37936559-37936578 | None:intergenic | 30.0% |
| TGTCTGAAAACTTGTATATG+TGG | - | chr7_1:37936564-37936583 | Msa1018100:intron | 30.0% | |
| !!! | GATGCTAGTATATTTTTTCC+AGG | - | chr7_1:37936648-37936667 | Msa1018100:intron | 30.0% |
| TCACTTAGTAATTGCAGTAT+AGG | - | chr7_1:37936680-37936699 | Msa1018100:intron | 30.0% | |
| GATTCATGTGTAATTCACAA+TGG | - | chr7_1:37936704-37936723 | Msa1018100:intron | 30.0% | |
| TTGACAAAAATACAGTGACA+CGG | + | chr7_1:37936841-37936860 | None:intergenic | 30.0% | |
| ! | ATGTATTTTGTGTGCATGTT+TGG | + | chr7_1:37936877-37936896 | None:intergenic | 30.0% |
| ! | CATTTAACTTTAGCAGTAGA+TGG | - | chr7_1:37936916-37936935 | Msa1018100:intron | 30.0% |
| ! | TGTATTTTACATGCAGGATT+TGG | - | chr7_1:37937036-37937055 | Msa1018100:intron | 30.0% |
| AGAAGCTCAATGTAATAGTA+GGG | - | chr7_1:37937225-37937244 | Msa1018100:intron | 30.0% | |
| !!! | AGGTATGCTTTTGTTTTACT+TGG | - | chr7_1:37937993-37938012 | Msa1018100:CDS | 30.0% |
| TTGACATGCATACATGTTAT+TGG | - | chr7_1:37938637-37938656 | Msa1018100:intron | 30.0% | |
| TGACATGCATACATGTTATT+GGG | - | chr7_1:37938638-37938657 | Msa1018100:intron | 30.0% | |
| TGTAGGTTTCTATTCACAAA+TGG | - | chr7_1:37938696-37938715 | Msa1018100:intron | 30.0% | |
| CATATAATGTGTAAACCGTA+TGG | + | chr7_1:37938893-37938912 | None:intergenic | 30.0% | |
| ! | TTTGATAACAAGAGACGAGA+GGG | + | chr7_1:37934418-37934437 | None:intergenic | 35.0% |
| ! | ATTTGATAACAAGAGACGAG+AGG | + | chr7_1:37934419-37934438 | None:intergenic | 35.0% |
| TTGGAGAAGGAATGAGATAT+GGG | + | chr7_1:37934466-37934485 | None:intergenic | 35.0% | |
| ATTGGAGAAGGAATGAGATA+TGG | + | chr7_1:37934467-37934486 | None:intergenic | 35.0% | |
| ! | GATTTAGGGTTTCAGAATTG+GGG | - | chr7_1:37934492-37934511 | Msa1018100:intron | 35.0% |
| CAAATTCCAAAATGTGCATC+CGG | - | chr7_1:37934881-37934900 | Msa1018100:intron | 35.0% | |
| !!! | GGTTCAAGTTTTTAAGTACC+AGG | - | chr7_1:37934969-37934988 | Msa1018100:intron | 35.0% |
| TGTTGAAGTTGAACGAACAA+AGG | + | chr7_1:37935172-37935191 | None:intergenic | 35.0% | |
| TTGAGTGTGATTGAGAAAAG+GGG | + | chr7_1:37935196-37935215 | None:intergenic | 35.0% | |
| GAAGAAGTAGTAGAGAAATG+AGG | + | chr7_1:37935255-37935274 | None:intergenic | 35.0% | |
| ACTACTTCTTCTTCTTGTTC+CGG | - | chr7_1:37935264-37935283 | Msa1018100:intron | 35.0% | |
| ! | AGTCAATACAAGCTGATTCA+TGG | + | chr7_1:37935464-37935483 | None:intergenic | 35.0% |
| !! | ATCAGCTTGTATTGACTCAA+CGG | - | chr7_1:37935467-37935486 | Msa1018100:intron | 35.0% |
| TGTTGGAGCTATTGTTCATT+CGG | - | chr7_1:37935500-37935519 | Msa1018100:intron | 35.0% | |
| ! | GTTGGTTCAAATGTTCGTAT+TGG | - | chr7_1:37935531-37935550 | Msa1018100:intron | 35.0% |
| !! | TCAAATGTTCGTATTGGTTC+CGG | - | chr7_1:37935537-37935556 | Msa1018100:CDS | 35.0% |
| GAATGAGCAATAGAAACAGA+AGG | + | chr7_1:37935576-37935595 | None:intergenic | 35.0% | |
| !! | GATCAGTTGAGTTGATTCAA+TGG | + | chr7_1:37935802-37935821 | None:intergenic | 35.0% |
| ! | TCAAGGAGTATAATGACATG+GGG | - | chr7_1:37936073-37936092 | Msa1018100:intron | 35.0% |
| GGATCAAAGTGATTCTTTAC+CGG | - | chr7_1:37936108-37936127 | Msa1018100:CDS | 35.0% | |
| !!! | ATGGTTTTAAATGGTGGTCA+TGG | - | chr7_1:37936163-37936182 | Msa1018100:intron | 35.0% |
| AGCTTATGCTGCCTAAAAAA+TGG | - | chr7_1:37936400-37936419 | Msa1018100:intron | 35.0% | |
| CCTAAAAAATGGTTGCATTG+CGG | - | chr7_1:37936411-37936430 | Msa1018100:intron | 35.0% | |
| AATGTCCGTGACAACAATAT+GGG | + | chr7_1:37936468-37936487 | None:intergenic | 35.0% | |
| TAATGTCCGTGACAACAATA+TGG | + | chr7_1:37936469-37936488 | None:intergenic | 35.0% | |
| ACTAAGTGAGATGTTAAACC+TGG | + | chr7_1:37936669-37936688 | None:intergenic | 35.0% | |
| ! | TTTTGTGTGCATGTTTGGAT+TGG | + | chr7_1:37936872-37936891 | None:intergenic | 35.0% |
| ! | GTGCATTGTATTTTACATGC+AGG | - | chr7_1:37937030-37937049 | Msa1018100:intron | 35.0% |
| ! | TGCAGGATTTGGATTTTATG+CGG | - | chr7_1:37937047-37937066 | Msa1018100:intron | 35.0% |
| TAACATGATAAAGAAGCCAC+AGG | - | chr7_1:37937080-37937099 | Msa1018100:intron | 35.0% | |
| CAAGACAAATTATCAACCTG+TGG | + | chr7_1:37937099-37937118 | None:intergenic | 35.0% | |
| CAGAAGCTCAATGTAATAGT+AGG | - | chr7_1:37937224-37937243 | Msa1018100:intron | 35.0% | |
| TGTAATAGTAGGGAACAATG+TGG | - | chr7_1:37937235-37937254 | Msa1018100:intron | 35.0% | |
| ! | TGCAAATACATGCATTGACA+GGG | - | chr7_1:37937265-37937284 | Msa1018100:intron | 35.0% |
| AGCTGGAGAGATACATTTAT+TGG | - | chr7_1:37937603-37937622 | Msa1018100:CDS | 35.0% | |
| GCTGGAGAGATACATTTATT+GGG | - | chr7_1:37937604-37937623 | Msa1018100:CDS | 35.0% | |
| CTGGAGAGATACATTTATTG+GGG | - | chr7_1:37937605-37937624 | Msa1018100:CDS | 35.0% | |
| !! | TTCTGATTAGTTCTGCAGAT+TGG | - | chr7_1:37937718-37937737 | Msa1018100:CDS | 35.0% |
| ATTGGCCACAATGTAGTTAT+TGG | - | chr7_1:37937736-37937755 | Msa1018100:CDS | 35.0% | |
| TTGGCCACAATGTAGTTATT+GGG | - | chr7_1:37937737-37937756 | Msa1018100:CDS | 35.0% | |
| TCTTCCCAATAACTACATTG+TGG | + | chr7_1:37937744-37937763 | None:intergenic | 35.0% | |
| TAGAACTAAAGTTATTGCCG+AGG | - | chr7_1:37937877-37937896 | Msa1018100:intron | 35.0% | |
| ATAGGAGATTATGTGACGAT+GGG | - | chr7_1:37937929-37937948 | Msa1018100:CDS | 35.0% | |
| !! | TCATGTATCGATTGCATCAA+AGG | - | chr7_1:37937973-37937992 | Msa1018100:CDS | 35.0% |
| !!! | TTGTTTTACTTGGTGCATTG+AGG | - | chr7_1:37938003-37938022 | Msa1018100:CDS | 35.0% |
| ! | AGTTTTCATCTTCACACTCA+CGG | - | chr7_1:37938250-37938269 | Msa1018100:intron | 35.0% |
| TGTTTGTAAATTGGGTGCTT+GGG | - | chr7_1:37938438-37938457 | Msa1018100:intron | 35.0% | |
| ATGCATACATGTTATTGGGT+TGG | - | chr7_1:37938642-37938661 | Msa1018100:intron | 35.0% | |
| TGCATACATGTTATTGGGTT+GGG | - | chr7_1:37938643-37938662 | Msa1018100:intron | 35.0% | |
| TAGAAACCTACAAAGCAACA+AGG | + | chr7_1:37938688-37938707 | None:intergenic | 35.0% | |
| AGGTTTCTATTCACAAATGG+CGG | - | chr7_1:37938699-37938718 | Msa1018100:intron | 35.0% | |
| CAATCTTGCAATGTAATGGT+CGG | + | chr7_1:37938838-37938857 | None:intergenic | 35.0% | |
| AAGTGATTCCGGTGATTATG+GGG | + | chr7_1:37934375-37934394 | None:intergenic | 40.0% | |
| GAAGTGATTCCGGTGATTAT+GGG | + | chr7_1:37934376-37934395 | None:intergenic | 40.0% | |
| ! | TTGATAACAAGAGACGAGAG+GGG | + | chr7_1:37934417-37934436 | None:intergenic | 40.0% |
| TGAGATATGGGAGAATCGAT+TGG | + | chr7_1:37934454-37934473 | None:intergenic | 40.0% | |
| TTCATCCGGATTCTAACTTC+CGG | - | chr7_1:37934846-37934865 | Msa1018100:intron | 40.0% | |
| AACTTCCGGAAGTTAGAATC+CGG | + | chr7_1:37934854-37934873 | None:intergenic | 40.0% | |
| ! | TATCTACCGGATGCACATTT+TGG | + | chr7_1:37934890-37934909 | None:intergenic | 40.0% |
| ! | TATTCCACATTTTGCACCTC+CGG | + | chr7_1:37934917-37934936 | None:intergenic | 40.0% |
| ! | TACCAGATTTTATGTACCGG+AGG | - | chr7_1:37934948-37934967 | Msa1018100:intron | 40.0% |
| AACCTCCGGTACATAAAATC+TGG | + | chr7_1:37934953-37934972 | None:intergenic | 40.0% | |
| AAGCTTGGATACTGGGTAAT+TGG | + | chr7_1:37935081-37935100 | None:intergenic | 40.0% | |
| TACCCAGTATCCAAGCTTAT+CGG | - | chr7_1:37935083-37935102 | Msa1018100:intron | 40.0% | |
| TCGTTCACTATGGAGAAGAT+CGG | + | chr7_1:37935113-37935132 | None:intergenic | 40.0% | |
| TCCATAGTGAACGATGACAA+TGG | - | chr7_1:37935119-37935138 | Msa1018100:intron | 40.0% | |
| GTCTTGTGTTTCAAGATCAG+AGG | - | chr7_1:37935377-37935396 | Msa1018100:intron | 40.0% | |
| ! | TCAACGGCTTTTCTAGATGT+TGG | - | chr7_1:37935483-37935502 | Msa1018100:intron | 40.0% |
| GTTGGAGCTATTGTTCATTC+GGG | - | chr7_1:37935501-37935520 | Msa1018100:intron | 40.0% | |
| TCACTCCACTTAATTACTCC+TGG | - | chr7_1:37935750-37935769 | Msa1018100:intron | 40.0% | |
| GTGTCAAACACCATTATTCC+AGG | + | chr7_1:37935771-37935790 | None:intergenic | 40.0% | |
| GTGACATTTAAACTGAGACG+AGG | - | chr7_1:37935852-37935871 | Msa1018100:intron | 40.0% | |
| ACATTTAAACTGAGACGAGG+CGG | - | chr7_1:37935855-37935874 | Msa1018100:intron | 40.0% | |
| TTCTGTTTGTCAGTGACGTA+GGG | + | chr7_1:37935948-37935967 | None:intergenic | 40.0% | |
| GACATGGGGTAACACATTTA+AGG | - | chr7_1:37936087-37936106 | Msa1018100:intron | 40.0% | |
| !!! | CCGCAATGCAACCATTTTTT+AGG | + | chr7_1:37936414-37936433 | None:intergenic | 40.0% |
| ! | AAATGGTTGCATTGCGGTTT+TGG | - | chr7_1:37936417-37936436 | Msa1018100:intron | 40.0% |
| ACAATATGGGTCACGCATAA+CGG | + | chr7_1:37936455-37936474 | None:intergenic | 40.0% | |
| ATTCACAATGGAGTCTGCAT+CGG | - | chr7_1:37936716-37936735 | Msa1018100:intron | 40.0% | |
| GAAAACCAGCATTACCATCT+TGG | + | chr7_1:37936742-37936761 | None:intergenic | 40.0% | |
| ! | GGATTTTATGCGGATAGTGA+CGG | - | chr7_1:37937057-37937076 | Msa1018100:intron | 40.0% |
| GTAGGGAACAATGTGGAAAT+TGG | - | chr7_1:37937242-37937261 | Msa1018100:intron | 40.0% | |
| ! | GTGCAAATACATGCATTGAC+AGG | - | chr7_1:37937264-37937283 | Msa1018100:intron | 40.0% |
| ! | GCAAATACATGCATTGACAG+GGG | - | chr7_1:37937266-37937285 | Msa1018100:intron | 40.0% |
| !!! | GGGGCAGGTTATTTTTTTGA+TGG | - | chr7_1:37937285-37937304 | Msa1018100:intron | 40.0% |
| TTAGAAACTCTGTGATGAGC+TGG | + | chr7_1:37937439-37937458 | None:intergenic | 40.0% | |
| ACAGAGAAACATGTAAGCCT+CGG | + | chr7_1:37937897-37937916 | None:intergenic | 40.0% | |
| CTCTGTTATGTGTTCAGCAT+AGG | - | chr7_1:37937911-37937930 | Msa1018100:CDS | 40.0% | |
| CATAGGAGATTATGTGACGA+TGG | - | chr7_1:37937928-37937947 | Msa1018100:CDS | 40.0% | |
| !! | TTTACTTGGTGCATTGAGGA+TGG | - | chr7_1:37938007-37938026 | Msa1018100:CDS | 40.0% |
| TACAACCTGTAATTCCTTGC+TGG | - | chr7_1:37938279-37938298 | Msa1018100:intron | 40.0% | |
| TACCAAGTGCATGTTTGCTT+TGG | - | chr7_1:37938305-37938324 | Msa1018100:intron | 40.0% | |
| TGAGTATGACAAAATCACGG+TGG | + | chr7_1:37938357-37938376 | None:intergenic | 40.0% | |
| CGGTGAGTATGACAAAATCA+CGG | + | chr7_1:37938360-37938379 | None:intergenic | 40.0% | |
| CTGTTTGTAAATTGGGTGCT+TGG | - | chr7_1:37938437-37938456 | Msa1018100:intron | 40.0% | |
| GTTTGTAAATTGGGTGCTTG+GGG | - | chr7_1:37938439-37938458 | Msa1018100:intron | 40.0% | |
| ! | TGCGTTAAGTTGTGTAACCA+AGG | - | chr7_1:37938509-37938528 | Msa1018100:intron | 40.0% |
| ATCACAGAACCTGGAGATTA+TGG | - | chr7_1:37938534-37938553 | Msa1018100:intron | 40.0% | |
| GACTAGTAGATCATTACAGC+AGG | + | chr7_1:37938567-37938586 | None:intergenic | 40.0% | |
| ! | CAAGGAAGCTGGTTTATGAA+TGG | + | chr7_1:37938670-37938689 | None:intergenic | 40.0% |
| AGTGATTCCGGTGATTATGG+GGG | + | chr7_1:37934374-37934393 | None:intergenic | 45.0% | |
| GGAAGTGATTCCGGTGATTA+TGG | + | chr7_1:37934377-37934396 | None:intergenic | 45.0% | |
| AGGGTTTCAGAATTGGGGAT+TGG | - | chr7_1:37934497-37934516 | Msa1018100:intron | 45.0% | |
| GGGTTTCAGAATTGGGGATT+GGG | - | chr7_1:37934498-37934517 | Msa1018100:intron | 45.0% | |
| TGCATCCGGTAGATACATTC+CGG | - | chr7_1:37934895-37934914 | Msa1018100:intron | 45.0% | |
| GGGGGCTAAAGAGATATTGA+GGG | - | chr7_1:37935011-37935030 | Msa1018100:intron | 45.0% | |
| GGGGCTAAAGAGATATTGAG+GGG | - | chr7_1:37935012-37935031 | Msa1018100:intron | 45.0% | |
| GGGCTAAAGAGATATTGAGG+GGG | - | chr7_1:37935013-37935032 | Msa1018100:intron | 45.0% | |
| CTCCGATAAGCTTGGATACT+GGG | + | chr7_1:37935088-37935107 | None:intergenic | 45.0% | |
| GTTCACTATGGAGAAGATCG+GGG | + | chr7_1:37935111-37935130 | None:intergenic | 45.0% | |
| CGTTCACTATGGAGAAGATC+GGG | + | chr7_1:37935112-37935131 | None:intergenic | 45.0% | |
| GCCATTGTCATCGTTCACTA+TGG | + | chr7_1:37935123-37935142 | None:intergenic | 45.0% | |
| GTTCATTCGGGATCTGTTGT+TGG | - | chr7_1:37935513-37935532 | Msa1018100:intron | 45.0% | |
| ! | ATTGGTTCCGGAACTGTGAT+TGG | - | chr7_1:37935549-37935568 | Msa1018100:CDS | 45.0% |
| AGAAGGTCCAATCACAGTTC+CGG | + | chr7_1:37935559-37935578 | None:intergenic | 45.0% | |
| ! | AGAGGGTGTAACGATTCTCT+CGG | + | chr7_1:37935900-37935919 | None:intergenic | 45.0% |
| CTTCTGTTTGTCAGTGACGT+AGG | + | chr7_1:37935949-37935968 | None:intergenic | 45.0% | |
| GCACAGATACAAACACGACA+CGG | + | chr7_1:37936368-37936387 | None:intergenic | 45.0% | |
| CGTGACCCATATTGTTGTCA+CGG | - | chr7_1:37936460-37936479 | Msa1018100:CDS | 45.0% | |
| GGACACCAAGTGTCATGTTA+TGG | - | chr7_1:37936789-37936808 | Msa1018100:intron | 45.0% | |
| CAGGTCCATAACATGACACT+TGG | + | chr7_1:37936797-37936816 | None:intergenic | 45.0% | |
| CAAGTGTCATGTTATGGACC+TGG | - | chr7_1:37936795-37936814 | Msa1018100:intron | 45.0% | |
| TATGGACCTGGCAGTAAGTT+TGG | - | chr7_1:37936807-37936826 | Msa1018100:intron | 45.0% | |
| ATTACGCCAAACTTACTGCC+AGG | + | chr7_1:37936816-37936835 | None:intergenic | 45.0% | |
| AATGTATCTCTCCAGCTGCA+TGG | + | chr7_1:37937600-37937619 | None:intergenic | 45.0% | |
| GGGAAGAATTGCATGCTTTG+TGG | - | chr7_1:37937757-37937776 | Msa1018100:CDS | 45.0% | |
| TGCATGCTTTGTGGACAAGT+TGG | - | chr7_1:37937766-37937785 | Msa1018100:CDS | 45.0% | |
| GCATGCTTTGTGGACAAGTT+GGG | - | chr7_1:37937767-37937786 | Msa1018100:CDS | 45.0% | |
| ATTATGTGACGATGGGAGGA+AGG | - | chr7_1:37937936-37937955 | Msa1018100:CDS | 45.0% | |
| TTATGTGACGATGGGAGGAA+GGG | - | chr7_1:37937937-37937956 | Msa1018100:CDS | 45.0% | |
| TACAGCCAGCAAGGAATTAC+AGG | + | chr7_1:37938287-37938306 | None:intergenic | 45.0% | |
| CACCAAAGCAAACATGCACT+TGG | + | chr7_1:37938310-37938329 | None:intergenic | 45.0% | |
| CAAGTGCATGTTTGCTTTGG+TGG | - | chr7_1:37938308-37938327 | Msa1018100:intron | 45.0% | |
| ACAGAACCTGGAGATTATGG+TGG | - | chr7_1:37938537-37938556 | Msa1018100:intron | 45.0% | |
| CTACAAAGCAACAAGGAAGC+TGG | + | chr7_1:37938681-37938700 | None:intergenic | 45.0% | |
| !! | CAGCTTCCTTGTTGCTTTGT+AGG | - | chr7_1:37938679-37938698 | Msa1018100:intron | 45.0% |
| TCCTCTAACTGCAAAACTGC+TGG | + | chr7_1:37938735-37938754 | None:intergenic | 45.0% | |
| TTCTGGCAAGCCACTGGAAT+CGG | + | chr7_1:37934323-37934342 | None:intergenic | 50.0% | |
| TCCTTCACCCCCATAATCAC+CGG | - | chr7_1:37934364-37934383 | Msa1018100:three_prime_UTR | 50.0% | |
| GCTGATGGAGGAAGTGATTC+CGG | + | chr7_1:37934386-37934405 | None:intergenic | 50.0% | |
| ATCCGGTAGATACATTCCGG+AGG | - | chr7_1:37934898-37934917 | Msa1018100:intron | 50.0% | |
| CACCTCCGGAATGTATCTAC+CGG | + | chr7_1:37934903-37934922 | None:intergenic | 50.0% | |
| ! | CATTCCGGAGGTGCAAAATG+TGG | - | chr7_1:37934910-37934929 | Msa1018100:intron | 50.0% |
| GGGGGGCTAAAGAGATATTG+AGG | - | chr7_1:37935010-37935029 | Msa1018100:intron | 50.0% | |
| GCTCCGATAAGCTTGGATAC+TGG | + | chr7_1:37935089-37935108 | None:intergenic | 50.0% | |
| TTTAAACTGAGACGAGGCGG+AGG | - | chr7_1:37935858-37935877 | Msa1018100:intron | 50.0% | |
| TTAAACTGAGACGAGGCGGA+GGG | - | chr7_1:37935859-37935878 | Msa1018100:intron | 50.0% | |
| !! | AAGGAGTGTTCGTGCTTCGT+AGG | + | chr7_1:37936235-37936254 | None:intergenic | 50.0% |
| TACGAAGCACGAACACTCCT+TGG | - | chr7_1:37936234-37936253 | Msa1018100:intron | 50.0% | |
| GCACGAACACTCCTTGGATT+AGG | - | chr7_1:37936240-37936259 | Msa1018100:intron | 50.0% | |
| ! | TCCTTGGATTAGGTGTGTCC+TGG | - | chr7_1:37936250-37936269 | Msa1018100:intron | 50.0% |
| ACCAGGACACACCTAATCCA+AGG | + | chr7_1:37936254-37936273 | None:intergenic | 50.0% | |
| GATTAGGTGTGTCCTGGTGT+CGG | - | chr7_1:37936256-37936275 | Msa1018100:intron | 50.0% | |
| ! | ATCGGCCAAGATGGTAATGC+TGG | - | chr7_1:37936734-37936753 | Msa1018100:intron | 50.0% |
| ! | ATACATGCATTGACAGGGGC+AGG | - | chr7_1:37937270-37937289 | Msa1018100:intron | 50.0% |
| ACTCTGTGATGAGCTGGCAT+AGG | + | chr7_1:37937433-37937452 | None:intergenic | 50.0% | |
| ! | TGTGGACAAGTTGGGATTGC+AGG | - | chr7_1:37937775-37937794 | Msa1018100:CDS | 50.0% |
| GGAGATTATGTGACGATGGG+AGG | - | chr7_1:37937932-37937951 | Msa1018100:CDS | 50.0% | |
| ! | CTTGGTGCATTGAGGATGGT+TGG | - | chr7_1:37938011-37938030 | Msa1018100:CDS | 50.0% |
| GGTGAGTTCAGCAGAATCAC+TGG | - | chr7_1:37938329-37938348 | Msa1018100:intron | 50.0% | |
| TCTGATTGCAACGTGCTTGC+AGG | - | chr7_1:37938476-37938495 | Msa1018100:intron | 50.0% | |
| ACCAAGGACATCACAGAACC+TGG | - | chr7_1:37938525-37938544 | Msa1018100:intron | 50.0% | |
| TCCAGGTTCTGTGATGTCCT+TGG | + | chr7_1:37938529-37938548 | None:intergenic | 50.0% | |
| GGAAAGCCACCATAATCTCC+AGG | + | chr7_1:37938546-37938565 | None:intergenic | 50.0% | |
| ! | GCCAGCAGTTTTGCAGTTAG+AGG | - | chr7_1:37938731-37938750 | Msa1018100:intron | 50.0% |
| GAAGCTTGTCCCGATTCCAG+TGG | - | chr7_1:37934310-37934329 | Msa1018100:three_prime_UTR | 55.0% | |
| TCTGGCAAGCCACTGGAATC+GGG | + | chr7_1:37934322-37934341 | None:intergenic | 55.0% | |
| !! | TTGGGTTTCTGGCAAGCCAC+TGG | + | chr7_1:37934329-37934348 | None:intergenic | 55.0% |
| CTTGCCAGAAACCCAACTCG+CGG | - | chr7_1:37934333-37934352 | Msa1018100:three_prime_UTR | 55.0% | |
| TTGCCAGAAACCCAACTCGC+GGG | - | chr7_1:37934334-37934353 | Msa1018100:three_prime_UTR | 55.0% | |
| ! | ATTCCCGCGAGTTGGGTTTC+TGG | + | chr7_1:37934340-37934359 | None:intergenic | 55.0% |
| GGAAGTGATTCCCGCGAGTT+GGG | + | chr7_1:37934347-37934366 | None:intergenic | 55.0% | |
| AGGAAGTGATTCCCGCGAGT+TGG | + | chr7_1:37934348-37934367 | None:intergenic | 55.0% | |
| TCCGGTGATTATGGGGGTGA+AGG | + | chr7_1:37934368-37934387 | None:intergenic | 55.0% | |
| AGAGGGGAAGAGTGAGCTGA+TGG | + | chr7_1:37934401-37934420 | None:intergenic | 55.0% | |
| AACACGACACGGACACTGAC+AGG | + | chr7_1:37936357-37936376 | None:intergenic | 55.0% | |
| TCACTCATTGGCCATGCAGC+TGG | - | chr7_1:37937586-37937605 | Msa1018100:CDS | 55.0% | |
| TGCACTTGGTACAGCCAGCA+AGG | + | chr7_1:37938296-37938315 | None:intergenic | 55.0% | |
| GGGGAAGAGTGAGCTGATGG+AGG | + | chr7_1:37934398-37934417 | None:intergenic | 60.0% | |
| GATCGGGGCTCCGATAAGCT+TGG | + | chr7_1:37935096-37935115 | None:intergenic | 60.0% | |
| CACGACACGTATCCGACACC+AGG | + | chr7_1:37936271-37936290 | None:intergenic | 60.0% | |
| ! | GGAGTCTGCATCGGCCAAGA+TGG | - | chr7_1:37936725-37936744 | Msa1018100:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 37934232 | 37938959 | 37934232 | ID=Msa1018100;Name=Msa1018100 |
| chr7_1 | mRNA | 37934232 | 37938959 | 37934232 | ID=Msa1018100-mRNA-1;Parent=Msa1018100;Name=Msa1018100-mRNA-1;_AED=0.21;_eAED=0.21;_QI=335|1|1|1|0.9|0.81|11|199|292 |
| chr7_1 | exon | 37934232 | 37934490 | 37934232 | ID=Msa1018100-mRNA-1:exon:7317;Parent=Msa1018100-mRNA-1 |
| chr7_1 | exon | 37934622 | 37934693 | 37934622 | ID=Msa1018100-mRNA-1:exon:7316;Parent=Msa1018100-mRNA-1 |
| chr7_1 | exon | 37935197 | 37935263 | 37935197 | ID=Msa1018100-mRNA-1:exon:7315;Parent=Msa1018100-mRNA-1 |
| chr7_1 | exon | 37935385 | 37935455 | 37935385 | ID=Msa1018100-mRNA-1:exon:7314;Parent=Msa1018100-mRNA-1 |
| chr7_1 | exon | 37935535 | 37935586 | 37935535 | ID=Msa1018100-mRNA-1:exon:7313;Parent=Msa1018100-mRNA-1 |
| chr7_1 | exon | 37935900 | 37935964 | 37935900 | ID=Msa1018100-mRNA-1:exon:7312;Parent=Msa1018100-mRNA-1 |
| chr7_1 | exon | 37936090 | 37936139 | 37936090 | ID=Msa1018100-mRNA-1:exon:7311;Parent=Msa1018100-mRNA-1 |
| chr7_1 | exon | 37936445 | 37936521 | 37936445 | ID=Msa1018100-mRNA-1:exon:7310;Parent=Msa1018100-mRNA-1 |
| chr7_1 | exon | 37937584 | 37937794 | 37937584 | ID=Msa1018100-mRNA-1:exon:7309;Parent=Msa1018100-mRNA-1 |
| chr7_1 | exon | 37937906 | 37938180 | 37937906 | ID=Msa1018100-mRNA-1:exon:7308;Parent=Msa1018100-mRNA-1 |
| chr7_1 | exon | 37938746 | 37938959 | 37938746 | ID=Msa1018100-mRNA-1:exon:7307;Parent=Msa1018100-mRNA-1 |
| chr7_1 | five_prime_UTR | 37938746 | 37938959 | 37938746 | ID=Msa1018100-mRNA-1:five_prime_utr;Parent=Msa1018100-mRNA-1 |
| chr7_1 | five_prime_UTR | 37938060 | 37938180 | 37938060 | ID=Msa1018100-mRNA-1:five_prime_utr;Parent=Msa1018100-mRNA-1 |
| chr7_1 | CDS | 37937906 | 37938059 | 37937906 | ID=Msa1018100-mRNA-1:cds;Parent=Msa1018100-mRNA-1 |
| chr7_1 | CDS | 37937584 | 37937794 | 37937584 | ID=Msa1018100-mRNA-1:cds;Parent=Msa1018100-mRNA-1 |
| chr7_1 | CDS | 37936445 | 37936521 | 37936445 | ID=Msa1018100-mRNA-1:cds;Parent=Msa1018100-mRNA-1 |
| chr7_1 | CDS | 37936090 | 37936139 | 37936090 | ID=Msa1018100-mRNA-1:cds;Parent=Msa1018100-mRNA-1 |
| chr7_1 | CDS | 37935900 | 37935964 | 37935900 | ID=Msa1018100-mRNA-1:cds;Parent=Msa1018100-mRNA-1 |
| chr7_1 | CDS | 37935535 | 37935586 | 37935535 | ID=Msa1018100-mRNA-1:cds;Parent=Msa1018100-mRNA-1 |
| chr7_1 | CDS | 37935385 | 37935455 | 37935385 | ID=Msa1018100-mRNA-1:cds;Parent=Msa1018100-mRNA-1 |
| chr7_1 | CDS | 37935197 | 37935263 | 37935197 | ID=Msa1018100-mRNA-1:cds;Parent=Msa1018100-mRNA-1 |
| chr7_1 | CDS | 37934622 | 37934693 | 37934622 | ID=Msa1018100-mRNA-1:cds;Parent=Msa1018100-mRNA-1 |
| chr7_1 | CDS | 37934431 | 37934490 | 37934431 | ID=Msa1018100-mRNA-1:cds;Parent=Msa1018100-mRNA-1 |
| chr7_1 | three_prime_UTR | 37934232 | 37934430 | 37934232 | ID=Msa1018100-mRNA-1:three_prime_utr;Parent=Msa1018100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
