AlfalfaGEDB | Msa0807680

M. sativa cultivar zhongmu-4 / Msa0807680

KEGG: -
GO: -
PFAM: PF06880.14

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0807680	XP_013452693.1	97.243	399	11	0	1	399	1	399	0.0	812

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0807680	A0A072UB96	97.243	399	11	0	1	399	1	399	0.0	812

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001380	Msa0807680	0.816941	4.265939e-52	-8.615850e-47
Msa0004480	Msa0807680	0.835671	1.464736e-56	-8.615850e-47
Msa0005260	Msa0807680	0.842728	2.165326e-58	-8.615850e-47
Msa0059900	Msa0807680	0.836588	8.569912e-57	-8.615850e-47
Msa0071470	Msa0807680	0.840993	6.220267e-58	-8.615850e-47
Msa0086560	Msa0807680	0.807857	4.118205e-50	-8.615850e-47
Msa0090380	Msa0807680	0.817715	2.856400e-52	-8.615850e-47
Msa0104810	Msa0807680	0.856577	2.927871e-62	-8.615850e-47
Msa0119430	Msa0807680	0.844332	8.072893e-59	-8.615850e-47
Msa0604570	Msa0807680	0.829358	5.383322e-55	-8.615850e-47
Msa0628810	Msa0807680	0.836677	8.132486e-57	-8.615850e-47
Msa0645560	Msa0807680	0.836185	1.085480e-56	-8.615850e-47
Msa0685240	Msa0807680	0.810411	1.168473e-50	-8.615850e-47
Msa0696100	Msa0807680	0.807707	4.432081e-50	-8.615850e-47
Msa0729350	Msa0807680	0.882929	6.897848e-71	-8.615850e-47
Msa0734940	Msa0807680	0.838543	2.702072e-57	-8.615850e-47
Msa0769720	Msa0807680	0.879969	8.068812e-70	-8.615850e-47
Msa0807670	Msa0807680	0.994061	2.866017e-204	-8.615850e-47
Msa0807680	Msa0814080	0.833330	5.675498e-56	-8.615850e-47
Msa0807680	Msa0848440	0.826805	2.217292e-54	-8.615850e-47
Msa0807680	Msa0860250	0.818253	2.158178e-52	-8.615850e-47
Msa0807680	Msa0945130	0.820656	6.112678e-53	-8.615850e-47
Msa0807680	Msa0968050	0.846874	1.651485e-59	-8.615850e-47
Msa0807680	Msa1025750	0.831902	1.282713e-55	-8.615850e-47
Msa0807680	Msa1064510	0.840256	9.701805e-58	-8.615850e-47
Msa0807680	Msa1082520	0.814653	1.380972e-51	-8.615850e-47
Msa0807680	Msa1089190	0.855332	6.772008e-62	-8.615850e-47
Msa0807680	Msa1108720	0.803651	3.148368e-49	-8.615850e-47
Msa0807680	Msa1109670	0.831432	1.674630e-55	-8.615850e-47
Msa0807680	Msa1131790	0.842050	3.275603e-58	-8.615850e-47
Msa0807680	Msa1153230	0.817406	3.353512e-52	-8.615850e-47
Msa0807680	Msa1165430	0.818783	1.636953e-52	-8.615850e-47
Msa0807680	Msa1184400	0.802808	4.706189e-49	-8.615850e-47
Msa0807680	Msa1188350	0.808692	2.733699e-50	-8.615850e-47
Msa0807680	Msa1212470	0.810668	1.028202e-50	-8.615850e-47
Msa0807680	Msa1214170	0.800300	1.537375e-48	-8.615850e-47
Msa0807680	Msa1218160	0.840980	6.269165e-58	-8.615850e-47
Msa0807680	Msa1225580	0.851823	6.904386e-61	-8.615850e-47
Msa0807680	Msa1246780	0.819046	1.426619e-52	-8.615850e-47
Msa0807680	Msa1246790	0.841252	5.317303e-58	-8.615850e-47
Msa0807680	Msa1260060	0.800008	1.762781e-48	-8.615850e-47
Msa0807680	Msa1286220	0.837111	6.303859e-57	-8.615850e-47
Msa0807680	Msa1299780	0.828230	1.009265e-54	-8.615850e-47
Msa0807680	Msa1329900	0.807349	5.280308e-50	-8.615850e-47
Msa0807680	Msa1355510	0.841736	3.965510e-58	-8.615850e-47
Msa0807680	Msa1360020	0.800414	1.457725e-48	-8.615850e-47
Msa0807680	Msa1364080	0.860101	2.612540e-63	-8.615850e-47
Msa0807680	Msa1367530	0.837460	5.131995e-57	-8.615850e-47
Msa0807680	Msa1369320	0.806966	6.363481e-50	-8.615850e-47
Msa0807680	Msa1389760	0.846114	2.662281e-59	-8.615850e-47
Msa0807680	Msa1420930	0.835947	1.247190e-56	-8.615850e-47
Msa0807680	Msa1422230	0.831967	1.236195e-55	-8.615850e-47
Msa0807680	Msa1424580	0.853705	2.003078e-61	-8.615850e-47
Msa0807680	Msa1433410	0.818854	1.577113e-52	-8.615850e-47
Msa0807680	Msa1443620	0.809460	1.871246e-50	-8.615850e-47
Msa0807680	Msa1452540	0.822075	2.876156e-53	-8.615850e-47
Msa0133100	Msa0807680	0.831967	1.236403e-55	-8.615850e-47
Msa0137860	Msa0807680	0.821731	3.454177e-53	-8.615850e-47
Msa0147790	Msa0807680	0.805098	1.572681e-49	-8.615850e-47
Msa0151170	Msa0807680	0.830350	3.085231e-55	-8.615850e-47
Msa0151220	Msa0807680	0.834954	2.222411e-56	-8.615850e-47
Msa0187310	Msa0807680	0.821407	4.103585e-53	-8.615850e-47
Msa0196880	Msa0807680	0.853533	2.243780e-61	-8.615850e-47
Msa0223140	Msa0807680	0.857817	1.260135e-62	-8.615850e-47
Msa0224130	Msa0807680	0.862410	5.168399e-64	-8.615850e-47
Msa0225840	Msa0807680	0.827786	1.290634e-54	-8.615850e-47
Msa0364790	Msa0807680	0.861235	1.183374e-63	-8.615850e-47
Msa0365950	Msa0807680	0.829205	5.865092e-55	-8.615850e-47
Msa0393100	Msa0807680	0.802528	5.375366e-49	-8.615850e-47
Msa0412260	Msa0807680	0.856156	3.890854e-62	-8.615850e-47
Msa0413870	Msa0807680	0.829205	5.862757e-55	-8.615850e-47
Msa0456770	Msa0807680	0.868707	5.346337e-66	-8.615850e-47
Msa0458940	Msa0807680	0.814894	1.220841e-51	-8.615850e-47
Msa0259440	Msa0807680	0.815642	8.328491e-52	-8.615850e-47
Msa0259580	Msa0807680	0.805108	1.565461e-49	-8.615850e-47
Msa0260530	Msa0807680	0.843953	1.020468e-58	-8.615850e-47
Msa0264500	Msa0807680	0.805761	1.142220e-49	-8.615850e-47
Msa0264680	Msa0807680	0.841499	4.580376e-58	-8.615850e-47
Msa0265270	Msa0807680	0.861176	1.233074e-63	-8.615850e-47
Msa0276430	Msa0807680	0.863472	2.430078e-64	-8.615850e-47
Msa0302510	Msa0807680	0.841537	4.474504e-58	-8.615850e-47
Msa0302730	Msa0807680	0.852698	3.891841e-61	-8.615850e-47
Msa0305620	Msa0807680	0.838883	2.207220e-57	-8.615850e-47
Msa0316470	Msa0807680	0.857256	1.847170e-62	-8.615850e-47
Msa0339720	Msa0807680	0.856765	2.579205e-62	-8.615850e-47
Msa0524330	Msa0807680	0.835991	1.215454e-56	-8.615850e-47
Msa0524440	Msa0807680	0.846776	1.756577e-59	-8.615850e-47
Msa0542530	Msa0807680	0.815572	8.628863e-52	-8.615850e-47
Msa0544640	Msa0807680	0.802334	5.894806e-49	-8.615850e-47
Msa0549140	Msa0807680	0.819130	1.365259e-52	-8.615850e-47
Msa0584580	Msa0807680	0.821484	3.940585e-53	-8.615850e-47
Msa0584600	Msa0807680	0.829823	4.149279e-55	-8.615850e-47
Msa0588670	Msa0807680	0.813321	2.715742e-51	-8.615850e-47
Msa0588710	Msa0807680	0.829919	3.931535e-55	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0807680	MtrunA17_Chr0c01g0489311	97.243	399	11	0	1	399	1	399	0.0	812
Msa0807680	MtrunA17_Chr5g0414421	50.739	406	173	12	1	399	31	416	1.06e-129	379
Msa0807680	MtrunA17_Chr5g0414371	50.250	400	177	9	1	399	1	379	2.36e-127	372
Msa0807680	MtrunA17_Chr5g0414441	49.010	404	184	10	1	399	1	387	9.17e-125	365
Msa0807680	MtrunA17_Chr5g0414461	49.127	401	181	11	1	399	1	380	1.39e-120	354
Msa0807680	MtrunA17_Chr5g0414391	48.500	400	186	8	1	399	1	381	5.78e-120	353
Msa0807680	MtrunA17_Chr6g0456421	41.809	409	217	10	1	399	1	398	1.30e-101	306
Msa0807680	MtrunA17_Chr5g0414451	46.154	104	48	3	120	221	2	99	2.81e-16	73.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0807680	AT1G13480.1	43.532	402	209	8	1	399	1	387	1.45e-103	311
Msa0807680	AT1G13520.1	44.307	404	203	10	1	399	1	387	1.43e-102	309
Msa0807680	AT1G13530.1	44.802	404	199	10	1	399	1	385	5.84e-98	297
Msa0807680	AT1G13500.1	45.098	408	193	12	1	399	1	386	1.27e-92	283
Msa0807680	AT1G13490.2	42.680	403	206	8	1	399	1	382	3.86e-91	280
Msa0807680	AT1G13470.1	44.554	404	193	14	1	399	1	378	4.32e-91	280
Msa0807680	AT1G13540.1	40.686	408	206	14	1	399	1	381	6.27e-86	266
Msa0807680	AT1G13490.1	42.040	402	191	9	1	399	1	363	7.43e-86	265
Msa0807680	AT1G13510.1	41.769	407	202	15	1	399	1	380	1.87e-83	260
Msa0807680	AT1G61600.1	38.372	430	225	11	1	399	1	421	2.75e-83	261
Msa0807680	AT1G13550.1	39.109	404	219	9	1	396	1	385	1.06e-77	245

Find 93 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTACCAAAACACCAGAATT+AGG	0.174233	5_3:+30663163	None:intergenic
AGAATTTGAAGGGACTAATA+AGG	0.248217	5_3:-30661519	Msa0807680:CDS
TGATAATGATGATGGTAAAA+AGG	0.249854	5_3:-30661786	Msa0807680:CDS
TCAAACACCATCATCAATTA+AGG	0.264161	5_3:-30661412	Msa0807680:CDS
TTGAAACCAACATCTTGTTT+TGG	0.266282	5_3:-30663127	Msa0807680:CDS
GATAATAAAAGTAGAAGTTT+TGG	0.283238	5_3:+30661164	None:intergenic
AGGCCCTAATTCTGGTGTTT+TGG	0.301149	5_3:-30663167	Msa0807680:CDS
GTTATAGAGAAATTGAATTC+TGG	0.308679	5_3:+30661962	None:intergenic
CCACCAGAAGGCCCTAATTC+TGG	0.339823	5_3:-30663175	Msa0807680:CDS
CAATCTCTGAAATATCAAAA+TGG	0.343971	5_3:+30661253	None:intergenic
GTCCATGAGAATGAAAATAA+TGG	0.353217	5_3:-30661367	Msa0807680:three_prime_UTR
CTGATATCTAAAGGATGAAT+TGG	0.361943	5_3:+30662184	None:intergenic
ACACCAGAATTAGGGCCTTC+TGG	0.363127	5_3:+30663172	None:intergenic
GAAATTGAATTCTGGTTTCC+CGG	0.363971	5_3:+30661970	None:intergenic
AGATTACACTAGAGCAGAAA+TGG	0.366742	5_3:-30661826	Msa0807680:CDS
ATCATCAATTAAGGAGCAAA+TGG	0.366805	5_3:-30661403	Msa0807680:CDS
TTGATATTTCAGAGATTGTA+AGG	0.367213	5_3:-30661248	Msa0807680:three_prime_UTR
CAGGAGAGGGTTGGATGGCT+TGG	0.376011	5_3:-30661578	Msa0807680:CDS
GAACAATGTGGGTTTGAGTA+TGG	0.379078	5_3:-30661627	Msa0807680:CDS
GGGAGAGTACCATGAAGTTA+AGG	0.382423	5_3:-30663101	Msa0807680:CDS
TACTATGTCATACATCTTCA+TGG	0.383281	5_3:-30662950	Msa0807680:CDS
CCCTTCATGTTTATCAAAGA+AGG	0.391686	5_3:-30661896	Msa0807680:CDS
AAAGTGTTGTTGTGGGAAAA+TGG	0.398385	5_3:-30661925	Msa0807680:CDS
ACATCAAGTGATTCAAGTCT+TGG	0.402196	5_3:-30662025	Msa0807680:CDS
GGAGAGTACCATGAAGTTAA+GGG	0.402330	5_3:-30663100	Msa0807680:CDS
GTAGAAGCAAAGTTACATTA+AGG	0.416879	5_3:-30662129	Msa0807680:CDS
TTACCAAAACACCAGAATTA+GGG	0.422217	5_3:+30663164	None:intergenic
AAAGAAGTGGTTGTAATTGC+TGG	0.422244	5_3:-30661731	Msa0807680:CDS
TGAGAGAATGAAGTGGGAGC+AGG	0.430736	5_3:-30661597	Msa0807680:CDS
GCTAAATCTGTTGCTGAAGA+TGG	0.430828	5_3:-30662094	Msa0807680:CDS
GGAATTTCAAGTTAAGAAAG+TGG	0.435170	5_3:-30661543	Msa0807680:CDS
AAGGCAAACCCTTAACTTCA+TGG	0.449187	5_3:+30663092	None:intergenic
AAGAAAGTGGAAGAATTTGA+AGG	0.451778	5_3:-30661530	Msa0807680:CDS
GAATGAAGTGGGAGCAGGAG+AGG	0.455395	5_3:-30661592	Msa0807680:CDS
TTTAATAGTATCAATAATGT+TGG	0.466830	5_3:-30661656	Msa0807680:CDS
AGCAAATGGGAATGAATGTC+TGG	0.470727	5_3:-30661389	Msa0807680:exon
GTGGATGATTCCCTCCGTGC+CGG	0.471168	5_3:-30661989	Msa0807680:CDS
ATTTGCTCCTTAATTGATGA+TGG	0.471685	5_3:+30661405	None:intergenic
GACAATGGCTGATTAAGAAC+TGG	0.473764	5_3:+30662983	None:intergenic
AATGAAGTGGGAGCAGGAGA+GGG	0.474655	5_3:-30661591	Msa0807680:CDS
GACTTCTTGTACAAAGAAAG+AGG	0.484167	5_3:+30663220	None:intergenic
GAATTTGAAGGGACTAATAA+GGG	0.485288	5_3:-30661518	Msa0807680:CDS
GAGAGGGTTGGATGGCTTGG+TGG	0.489813	5_3:-30661575	Msa0807680:CDS
TGCTGGGTGGGAAGCTATGA+TGG	0.490086	5_3:-30661714	Msa0807680:CDS
TATTTGTCACTGATATCTAA+AGG	0.492371	5_3:+30662175	None:intergenic
TCAAGTCTTGGAGAAGCATC+AGG	0.497137	5_3:-30662013	Msa0807680:CDS
TCCTTCTTTGATAAACATGA+AGG	0.498261	5_3:+30661895	None:intergenic
ATGTATGACATAGTATTGAT+TGG	0.499829	5_3:+30662958	None:intergenic
CATCTTCATGGCAAGAAAAG+AGG	0.503885	5_3:-30662938	Msa0807680:CDS
TGGATGATTCCCTCCGTGCC+GGG	0.510450	5_3:-30661988	Msa0807680:CDS
TTTGTTATAAAGAGATTGGA+TGG	0.511821	5_3:-30661458	Msa0807680:CDS
AAGTGGGAGCAGGAGAGGGT+TGG	0.525230	5_3:-30661587	Msa0807680:CDS
TTCTGGTTTCCCGGCACGGA+GGG	0.529376	5_3:+30661979	None:intergenic
CTGATTAAGAACTGGAATGA+AGG	0.530740	5_3:+30662991	None:intergenic
GAATTAGGGCCTTCTGGTGG+AGG	0.531123	5_3:+30663178	None:intergenic
TGAATTCTGGTTTCCCGGCA+CGG	0.533001	5_3:+30661975	None:intergenic
GTTGGAGAAAAGAACAATGT+GGG	0.534106	5_3:-30661638	Msa0807680:CDS
ATGGCTTGGTGGGAAAGAAA+AGG	0.534199	5_3:-30661564	Msa0807680:CDS
TCATCAATTAAGGAGCAAAT+GGG	0.535072	5_3:-30661402	Msa0807680:CDS
AGCTATGATGGATAATAAGA+TGG	0.539308	5_3:-30661702	Msa0807680:CDS
TGAGAATGAAAATAATGGAT+AGG	0.546966	5_3:-30661362	Msa0807680:three_prime_UTR
AGAGGGTTGGATGGCTTGGT+GGG	0.548797	5_3:-30661574	Msa0807680:CDS
CCCAACCCAAAACAAGATGT+TGG	0.552661	5_3:+30663121	None:intergenic
GATTACACTAGAGCAGAAAT+GGG	0.553713	5_3:-30661825	Msa0807680:CDS
TTTGTACAAGAAGTCTGAAG+AGG	0.555051	5_3:-30663212	Msa0807680:CDS
GGGAGCAGGAGAGGGTTGGA+TGG	0.555243	5_3:-30661583	Msa0807680:CDS
CTGATCTATAAAACAGCTCA+AGG	0.565699	5_3:+30663053	None:intergenic
ATCTTCATGGCAAGAAAAGA+GGG	0.569344	5_3:-30662937	Msa0807680:intron
AGTGGTTGTAATTGCTGGGT+GGG	0.569655	5_3:-30661726	Msa0807680:CDS
TTGAAGGGACTAATAAGGGA+TGG	0.569939	5_3:-30661514	Msa0807680:CDS
TGTTCAGAAAGTGTTGTTGT+GGG	0.572278	5_3:-30661932	Msa0807680:CDS
AGCAAAGTTACATTAAGGAG+TGG	0.577098	5_3:-30662124	Msa0807680:CDS
AAAATTTGGATGTTATGTGT+TGG	0.578946	5_3:-30661489	Msa0807680:CDS
AGAAAGTGGAAGAATTTGAA+GGG	0.580351	5_3:-30661529	Msa0807680:CDS
TATGACATAGTATTGATTGG+AGG	0.584322	5_3:+30662961	None:intergenic
CCTTCTTTGATAAACATGAA+GGG	0.590946	5_3:+30661896	None:intergenic
CTGAAGATGGATACCCTCCA+AGG	0.601083	5_3:-30662081	Msa0807680:CDS
TGTTGGAGAAAAGAACAATG+TGG	0.611466	5_3:-30661639	Msa0807680:CDS
CAATAGTTGAGAGAATGAAG+TGG	0.612002	5_3:-30661604	Msa0807680:CDS
TAACTCAAAGGATGAAGATG+TGG	0.613245	5_3:-30662242	Msa0807680:CDS
ATGTTCAGAAAGTGTTGTTG+TGG	0.614049	5_3:-30661933	Msa0807680:CDS
GGAAGCATACAATAACTCAA+AGG	0.617419	5_3:-30662254	Msa0807680:CDS
CTCTCATTACCTCCACCAGA+AGG	0.619265	5_3:-30663187	Msa0807680:CDS
AATAGTTGAGAGAATGAAGT+GGG	0.629735	5_3:-30661603	Msa0807680:CDS
AAGAAGTGGTTGTAATTGCT+GGG	0.631620	5_3:-30661730	Msa0807680:CDS
TATAGAATATGTATGTGACT+AGG	0.634027	5_3:-30663243	Msa0807680:exon
TAGTATTGATTGGAGGACAA+TGG	0.649023	5_3:+30662968	None:intergenic
CCAGAATTAGGGCCTTCTGG+TGG	0.656141	5_3:+30663175	None:intergenic
TCTTGGAGAAGCATCAGGTG+TGG	0.658129	5_3:-30662008	Msa0807680:CDS
AATGTAACTTTGCTTCTACG+AGG	0.675300	5_3:+30662133	None:intergenic
AAGTGGTTGTAATTGCTGGG+TGG	0.699538	5_3:-30661727	Msa0807680:CDS
ATTCTGGTTTCCCGGCACGG+AGG	0.720641	5_3:+30661978	None:intergenic
ATGATGGTGTTTGAAAGCAT+AGG	0.724364	5_3:+30661421	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TCATGTCAAAAATTTAAAAT+TGG	+	chr5_3:30662107-30662126	None:intergenic	15.0%
!!	TTTAATAGTATCAATAATGT+TGG	-	chr5_3:30662792-30662811	Msa0807680:intron	15.0%
!!!	TCATGTCAAAAATTTAAAAT+TGG	+	chr5_3:30662107-30662126	None:intergenic	15.0%
!!	TTTAATAGTATCAATAATGT+TGG	-	chr5_3:30662792-30662811	Msa0807680:intron	15.0%
!!!	TAAATTTTTCCTCTGTTATT+TGG	+	chr5_3:30661764-30661783	None:intergenic	20.0%
!!!	TTTTCTAGTATTGTAGTATA+AGG	-	chr5_3:30661876-30661895	Msa0807680:CDS	20.0%
!!!	TTTCTAGTATTGTAGTATAA+GGG	-	chr5_3:30661877-30661896	Msa0807680:CDS	20.0%
!!!	AATTTAAAATTGGTTCAACA+CGG	+	chr5_3:30662097-30662116	None:intergenic	20.0%
!!	AGTATTATACTGATGTAATT+TGG	-	chr5_3:30662157-30662176	Msa0807680:CDS	20.0%
!!!	GATAATAAAAGTAGAAGTTT+TGG	+	chr5_3:30663287-30663306	None:intergenic	20.0%
!!!	TAAATTTTTCCTCTGTTATT+TGG	+	chr5_3:30661764-30661783	None:intergenic	20.0%
!!!	TTTTCTAGTATTGTAGTATA+AGG	-	chr5_3:30661876-30661895	Msa0807680:CDS	20.0%
!!!	TTTCTAGTATTGTAGTATAA+GGG	-	chr5_3:30661877-30661896	Msa0807680:CDS	20.0%
!!!	AATTTAAAATTGGTTCAACA+CGG	+	chr5_3:30662097-30662116	None:intergenic	20.0%
!!	AGTATTATACTGATGTAATT+TGG	-	chr5_3:30662157-30662176	Msa0807680:CDS	20.0%
!!!	GATAATAAAAGTAGAAGTTT+TGG	+	chr5_3:30663287-30663306	None:intergenic	20.0%
!	TATAGAATATGTATGTGACT+AGG	-	chr5_3:30661205-30661224	Msa0807680:three_prime_UTR	25.0%
!!!	ATGTATGACATAGTATTGAT+TGG	+	chr5_3:30661493-30661512	None:intergenic	25.0%
!	AGTACTATATAACTCACATT+TGG	+	chr5_3:30661610-30661629	None:intergenic	25.0%
!	TATATAGTACTACTGACATA+AGG	-	chr5_3:30661619-30661638	Msa0807680:CDS	25.0%
!!	ACTTTGAATTTCGATGATTT+TGG	-	chr5_3:30661670-30661689	Msa0807680:CDS	25.0%
!	TGTTAGATTTGAATACAAGT+TGG	-	chr5_3:30662012-30662031	Msa0807680:CDS	25.0%
!!!	TAATTTGGTTTTTCTTCTGT+AGG	-	chr5_3:30662172-30662191	Msa0807680:CDS	25.0%
!!!	AATTTGGTTTTTCTTCTGTA+GGG	-	chr5_3:30662173-30662192	Msa0807680:CDS	25.0%
!	TATTTGTCACTGATATCTAA+AGG	+	chr5_3:30662276-30662295	None:intergenic	25.0%
!	GTTATAGAGAAATTGAATTC+TGG	+	chr5_3:30662489-30662508	None:intergenic	25.0%
!!!	TTTTCATGTGATAATGATGA+TGG	-	chr5_3:30662654-30662673	Msa0807680:intron	25.0%
!!!	TGATAATGATGATGGTAAAA+AGG	-	chr5_3:30662662-30662681	Msa0807680:intron	25.0%
!!!	GATAATGATGATGGTAAAAA+GGG	-	chr5_3:30662663-30662682	Msa0807680:intron	25.0%
!	AATAAGGGATGGAAAAAATT+TGG	-	chr5_3:30662945-30662964	Msa0807680:CDS	25.0%
!	AAAATTTGGATGTTATGTGT+TGG	-	chr5_3:30662959-30662978	Msa0807680:CDS	25.0%
!!!	GACTTTTGTTATAAAGAGAT+TGG	-	chr5_3:30662986-30663005	Msa0807680:CDS	25.0%
!!	TTTGTTATAAAGAGATTGGA+TGG	-	chr5_3:30662990-30663009	Msa0807680:CDS	25.0%
!!	ATCCATTATTTTCATTCTCA+TGG	+	chr5_3:30663086-30663105	None:intergenic	25.0%
!!!	TGAGAATGAAAATAATGGAT+AGG	-	chr5_3:30663086-30663105	Msa0807680:CDS	25.0%
!!!	CAATCTCTGAAATATCAAAA+TGG	+	chr5_3:30663198-30663217	None:intergenic	25.0%
!	TTGATATTTCAGAGATTGTA+AGG	-	chr5_3:30663200-30663219	Msa0807680:CDS	25.0%
!	GCTTTATATTCAAGAATAAC+TGG	+	chr5_3:30661133-30661152	None:intergenic	25.0%
!	TATAGAATATGTATGTGACT+AGG	-	chr5_3:30661205-30661224	Msa0807680:three_prime_UTR	25.0%
!!!	ATGTATGACATAGTATTGAT+TGG	+	chr5_3:30661493-30661512	None:intergenic	25.0%
!	AGTACTATATAACTCACATT+TGG	+	chr5_3:30661610-30661629	None:intergenic	25.0%
!	TATATAGTACTACTGACATA+AGG	-	chr5_3:30661619-30661638	Msa0807680:CDS	25.0%
!!	ACTTTGAATTTCGATGATTT+TGG	-	chr5_3:30661670-30661689	Msa0807680:CDS	25.0%
!	TGTTAGATTTGAATACAAGT+TGG	-	chr5_3:30662012-30662031	Msa0807680:CDS	25.0%
!!!	TAATTTGGTTTTTCTTCTGT+AGG	-	chr5_3:30662172-30662191	Msa0807680:CDS	25.0%
!!!	AATTTGGTTTTTCTTCTGTA+GGG	-	chr5_3:30662173-30662192	Msa0807680:CDS	25.0%
!	TATTTGTCACTGATATCTAA+AGG	+	chr5_3:30662276-30662295	None:intergenic	25.0%
!	GTTATAGAGAAATTGAATTC+TGG	+	chr5_3:30662489-30662508	None:intergenic	25.0%
!!!	TTTTCATGTGATAATGATGA+TGG	-	chr5_3:30662654-30662673	Msa0807680:intron	25.0%
!!!	TGATAATGATGATGGTAAAA+AGG	-	chr5_3:30662662-30662681	Msa0807680:intron	25.0%
!!!	GATAATGATGATGGTAAAAA+GGG	-	chr5_3:30662663-30662682	Msa0807680:intron	25.0%
!	AATAAGGGATGGAAAAAATT+TGG	-	chr5_3:30662945-30662964	Msa0807680:CDS	25.0%
!	AAAATTTGGATGTTATGTGT+TGG	-	chr5_3:30662959-30662978	Msa0807680:CDS	25.0%
!!!	GACTTTTGTTATAAAGAGAT+TGG	-	chr5_3:30662986-30663005	Msa0807680:CDS	25.0%
!!	TTTGTTATAAAGAGATTGGA+TGG	-	chr5_3:30662990-30663009	Msa0807680:CDS	25.0%
!!	ATCCATTATTTTCATTCTCA+TGG	+	chr5_3:30663086-30663105	None:intergenic	25.0%
!!!	TGAGAATGAAAATAATGGAT+AGG	-	chr5_3:30663086-30663105	Msa0807680:CDS	25.0%
!!!	CAATCTCTGAAATATCAAAA+TGG	+	chr5_3:30663198-30663217	None:intergenic	25.0%
!	TTGATATTTCAGAGATTGTA+AGG	-	chr5_3:30663200-30663219	Msa0807680:CDS	25.0%
	TTACCAAAACACCAGAATTA+GGG	+	chr5_3:30661287-30661306	None:intergenic	30.0%
	ATTACCAAAACACCAGAATT+AGG	+	chr5_3:30661288-30661307	None:intergenic	30.0%
!!	TTGAAACCAACATCTTGTTT+TGG	-	chr5_3:30661321-30661340	Msa0807680:three_prime_UTR	30.0%
!!!	TGAAACCAACATCTTGTTTT+GGG	-	chr5_3:30661322-30661341	Msa0807680:three_prime_UTR	30.0%
!!	TATGACATAGTATTGATTGG+AGG	+	chr5_3:30661490-30661509	None:intergenic	30.0%
	TACTATGTCATACATCTTCA+TGG	-	chr5_3:30661498-30661517	Msa0807680:CDS	30.0%
	CTGACATAAGGTTGAAATAA+CGG	-	chr5_3:30661631-30661650	Msa0807680:CDS	30.0%
	TGACATAAGGTTGAAATAAC+GGG	-	chr5_3:30661632-30661651	Msa0807680:CDS	30.0%
!	AAATAACGGGGAATATACTT+GGG	-	chr5_3:30661645-30661664	Msa0807680:CDS	30.0%
!!!	GACATCAACGTATTTTGATA+AGG	-	chr5_3:30661694-30661713	Msa0807680:CDS	30.0%
	TTAAACTTGATCATCAAAGC+AGG	-	chr5_3:30661781-30661800	Msa0807680:CDS	30.0%
	CTGATATCTAAAGGATGAAT+TGG	+	chr5_3:30662267-30662286	None:intergenic	30.0%
	GTAGAAGCAAAGTTACATTA+AGG	-	chr5_3:30662319-30662338	Msa0807680:intron	30.0%
	TTCTACTTAAAAACCTTGGA+GGG	+	chr5_3:30662383-30662402	None:intergenic	30.0%
	CCTTCTTTGATAAACATGAA+GGG	+	chr5_3:30662555-30662574	None:intergenic	30.0%
	TCCTTCTTTGATAAACATGA+AGG	+	chr5_3:30662556-30662575	None:intergenic	30.0%
!!	AGCTATGATGGATAATAAGA+TGG	-	chr5_3:30662746-30662765	Msa0807680:intron	30.0%
!!!	ATGTAGCTGAAAGTTTTTTG+TGG	-	chr5_3:30662769-30662788	Msa0807680:intron	30.0%
	AATAGTTGAGAGAATGAAGT+GGG	-	chr5_3:30662845-30662864	Msa0807680:intron	30.0%
!!	GGAATTTCAAGTTAAGAAAG+TGG	-	chr5_3:30662905-30662924	Msa0807680:intron	30.0%
	AAGAAAGTGGAAGAATTTGA+AGG	-	chr5_3:30662918-30662937	Msa0807680:intron	30.0%
	AGAAAGTGGAAGAATTTGAA+GGG	-	chr5_3:30662919-30662938	Msa0807680:intron	30.0%
	AGAATTTGAAGGGACTAATA+AGG	-	chr5_3:30662929-30662948	Msa0807680:intron	30.0%
	GAATTTGAAGGGACTAATAA+GGG	-	chr5_3:30662930-30662949	Msa0807680:intron	30.0%
	TCAAACACCATCATCAATTA+AGG	-	chr5_3:30663036-30663055	Msa0807680:CDS	30.0%
	ATTTGCTCCTTAATTGATGA+TGG	+	chr5_3:30663046-30663065	None:intergenic	30.0%
	ATCATCAATTAAGGAGCAAA+TGG	-	chr5_3:30663045-30663064	Msa0807680:CDS	30.0%
	TCATCAATTAAGGAGCAAAT+GGG	-	chr5_3:30663046-30663065	Msa0807680:CDS	30.0%
	GTCCATGAGAATGAAAATAA+TGG	-	chr5_3:30663081-30663100	Msa0807680:CDS	30.0%
	TTACCAAAACACCAGAATTA+GGG	+	chr5_3:30661287-30661306	None:intergenic	30.0%
	ATTACCAAAACACCAGAATT+AGG	+	chr5_3:30661288-30661307	None:intergenic	30.0%
!!	TTGAAACCAACATCTTGTTT+TGG	-	chr5_3:30661321-30661340	Msa0807680:three_prime_UTR	30.0%
!!!	TGAAACCAACATCTTGTTTT+GGG	-	chr5_3:30661322-30661341	Msa0807680:three_prime_UTR	30.0%
!!	TATGACATAGTATTGATTGG+AGG	+	chr5_3:30661490-30661509	None:intergenic	30.0%
	TACTATGTCATACATCTTCA+TGG	-	chr5_3:30661498-30661517	Msa0807680:CDS	30.0%
	CTGACATAAGGTTGAAATAA+CGG	-	chr5_3:30661631-30661650	Msa0807680:CDS	30.0%
	TGACATAAGGTTGAAATAAC+GGG	-	chr5_3:30661632-30661651	Msa0807680:CDS	30.0%
!	AAATAACGGGGAATATACTT+GGG	-	chr5_3:30661645-30661664	Msa0807680:CDS	30.0%
!!!	GACATCAACGTATTTTGATA+AGG	-	chr5_3:30661694-30661713	Msa0807680:CDS	30.0%
	TTAAACTTGATCATCAAAGC+AGG	-	chr5_3:30661781-30661800	Msa0807680:CDS	30.0%
	CTGATATCTAAAGGATGAAT+TGG	+	chr5_3:30662267-30662286	None:intergenic	30.0%
	GTAGAAGCAAAGTTACATTA+AGG	-	chr5_3:30662319-30662338	Msa0807680:intron	30.0%
	TTCTACTTAAAAACCTTGGA+GGG	+	chr5_3:30662383-30662402	None:intergenic	30.0%
	CCTTCTTTGATAAACATGAA+GGG	+	chr5_3:30662555-30662574	None:intergenic	30.0%
	TCCTTCTTTGATAAACATGA+AGG	+	chr5_3:30662556-30662575	None:intergenic	30.0%
!!	AGCTATGATGGATAATAAGA+TGG	-	chr5_3:30662746-30662765	Msa0807680:intron	30.0%
!!!	ATGTAGCTGAAAGTTTTTTG+TGG	-	chr5_3:30662769-30662788	Msa0807680:intron	30.0%
	AATAGTTGAGAGAATGAAGT+GGG	-	chr5_3:30662845-30662864	Msa0807680:intron	30.0%
!!	GGAATTTCAAGTTAAGAAAG+TGG	-	chr5_3:30662905-30662924	Msa0807680:intron	30.0%
	AAGAAAGTGGAAGAATTTGA+AGG	-	chr5_3:30662918-30662937	Msa0807680:intron	30.0%
	AGAAAGTGGAAGAATTTGAA+GGG	-	chr5_3:30662919-30662938	Msa0807680:intron	30.0%
	AGAATTTGAAGGGACTAATA+AGG	-	chr5_3:30662929-30662948	Msa0807680:intron	30.0%
	GAATTTGAAGGGACTAATAA+GGG	-	chr5_3:30662930-30662949	Msa0807680:intron	30.0%
	TCAAACACCATCATCAATTA+AGG	-	chr5_3:30663036-30663055	Msa0807680:CDS	30.0%
	ATTTGCTCCTTAATTGATGA+TGG	+	chr5_3:30663046-30663065	None:intergenic	30.0%
	ATCATCAATTAAGGAGCAAA+TGG	-	chr5_3:30663045-30663064	Msa0807680:CDS	30.0%
	TCATCAATTAAGGAGCAAAT+GGG	-	chr5_3:30663046-30663065	Msa0807680:CDS	30.0%
	GTCCATGAGAATGAAAATAA+TGG	-	chr5_3:30663081-30663100	Msa0807680:CDS	30.0%
	GACTTCTTGTACAAAGAAAG+AGG	+	chr5_3:30661231-30661250	None:intergenic	35.0%
	TTTGTACAAGAAGTCTGAAG+AGG	-	chr5_3:30661236-30661255	Msa0807680:three_prime_UTR	35.0%
	CTGATCTATAAAACAGCTCA+AGG	+	chr5_3:30661398-30661417	None:intergenic	35.0%
!!	CTTGAGCTGTTTTATAGATC+AGG	-	chr5_3:30661396-30661415	Msa0807680:exon	35.0%
	CTGATTAAGAACTGGAATGA+AGG	+	chr5_3:30661460-30661479	None:intergenic	35.0%
!!	TAGTATTGATTGGAGGACAA+TGG	+	chr5_3:30661483-30661502	None:intergenic	35.0%
	ATCTTCATGGCAAGAAAAGA+GGG	-	chr5_3:30661511-30661530	Msa0807680:CDS	35.0%
	TAACTCACATTTGGTTGAAC+TGG	+	chr5_3:30661601-30661620	None:intergenic	35.0%
	GACATAAGGTTGAAATAACG+GGG	-	chr5_3:30661633-30661652	Msa0807680:CDS	35.0%
!	GAAATAACGGGGAATATACT+TGG	-	chr5_3:30661644-30661663	Msa0807680:CDS	35.0%
!!	GCTTCAGTGACTTTGATTTT+CGG	+	chr5_3:30661736-30661755	None:intergenic	35.0%
	GAAAATCAAAGTCACTGAAG+CGG	-	chr5_3:30661735-30661754	Msa0807680:CDS	35.0%
	TTGAAGTCTTGAACATGTCA+AGG	+	chr5_3:30662138-30662157	None:intergenic	35.0%
!	GGAAGCATACAATAACTCAA+AGG	-	chr5_3:30662194-30662213	Msa0807680:CDS	35.0%
	TAACTCAAAGGATGAAGATG+TGG	-	chr5_3:30662206-30662225	Msa0807680:CDS	35.0%
	AATGTAACTTTGCTTCTACG+AGG	+	chr5_3:30662318-30662337	None:intergenic	35.0%
	AGCAAAGTTACATTAAGGAG+TGG	-	chr5_3:30662324-30662343	Msa0807680:intron	35.0%
	CTTCTACTTAAAAACCTTGG+AGG	+	chr5_3:30662384-30662403	None:intergenic	35.0%
!!!	CTCCAAGGTTTTTAAGTAGA+AGG	-	chr5_3:30662382-30662401	Msa0807680:intron	35.0%
	CACCTTCTACTTAAAAACCT+TGG	+	chr5_3:30662387-30662406	None:intergenic	35.0%
!!!	CAAGGTTTTTAAGTAGAAGG+TGG	-	chr5_3:30662385-30662404	Msa0807680:intron	35.0%
	ACATCAAGTGATTCAAGTCT+TGG	-	chr5_3:30662423-30662442	Msa0807680:intron	35.0%
!!	GAAATTGAATTCTGGTTTCC+CGG	+	chr5_3:30662481-30662500	None:intergenic	35.0%
!!	ATGTTCAGAAAGTGTTGTTG+TGG	-	chr5_3:30662515-30662534	Msa0807680:intron	35.0%
!!	TGTTCAGAAAGTGTTGTTGT+GGG	-	chr5_3:30662516-30662535	Msa0807680:intron	35.0%
!!	AAAGTGTTGTTGTGGGAAAA+TGG	-	chr5_3:30662523-30662542	Msa0807680:intron	35.0%
	CCCTTCATGTTTATCAAAGA+AGG	-	chr5_3:30662552-30662571	Msa0807680:intron	35.0%
	AGATTACACTAGAGCAGAAA+TGG	-	chr5_3:30662622-30662641	Msa0807680:intron	35.0%
	GATTACACTAGAGCAGAAAT+GGG	-	chr5_3:30662623-30662642	Msa0807680:intron	35.0%
	AAAGAAGTGGTTGTAATTGC+TGG	-	chr5_3:30662717-30662736	Msa0807680:intron	35.0%
	AAGAAGTGGTTGTAATTGCT+GGG	-	chr5_3:30662718-30662737	Msa0807680:intron	35.0%
	TGTTGGAGAAAAGAACAATG+TGG	-	chr5_3:30662809-30662828	Msa0807680:intron	35.0%
	GTTGGAGAAAAGAACAATGT+GGG	-	chr5_3:30662810-30662829	Msa0807680:intron	35.0%
	CAATAGTTGAGAGAATGAAG+TGG	-	chr5_3:30662844-30662863	Msa0807680:intron	35.0%
!	ATGATGGTGTTTGAAAGCAT+AGG	+	chr5_3:30663030-30663049	None:intergenic	35.0%
!!!	GTAGAAGTTTTGGTTTGCTT+GGG	+	chr5_3:30663277-30663296	None:intergenic	35.0%
!!!	AGTAGAAGTTTTGGTTTGCT+TGG	+	chr5_3:30663278-30663297	None:intergenic	35.0%
	GACTTCTTGTACAAAGAAAG+AGG	+	chr5_3:30661231-30661250	None:intergenic	35.0%
	TTTGTACAAGAAGTCTGAAG+AGG	-	chr5_3:30661236-30661255	Msa0807680:three_prime_UTR	35.0%
	CTGATCTATAAAACAGCTCA+AGG	+	chr5_3:30661398-30661417	None:intergenic	35.0%
!!	CTTGAGCTGTTTTATAGATC+AGG	-	chr5_3:30661396-30661415	Msa0807680:exon	35.0%
	CTGATTAAGAACTGGAATGA+AGG	+	chr5_3:30661460-30661479	None:intergenic	35.0%
!!	TAGTATTGATTGGAGGACAA+TGG	+	chr5_3:30661483-30661502	None:intergenic	35.0%
	ATCTTCATGGCAAGAAAAGA+GGG	-	chr5_3:30661511-30661530	Msa0807680:CDS	35.0%
	TAACTCACATTTGGTTGAAC+TGG	+	chr5_3:30661601-30661620	None:intergenic	35.0%
	GACATAAGGTTGAAATAACG+GGG	-	chr5_3:30661633-30661652	Msa0807680:CDS	35.0%
!	GAAATAACGGGGAATATACT+TGG	-	chr5_3:30661644-30661663	Msa0807680:CDS	35.0%
!!	GCTTCAGTGACTTTGATTTT+CGG	+	chr5_3:30661736-30661755	None:intergenic	35.0%
	GAAAATCAAAGTCACTGAAG+CGG	-	chr5_3:30661735-30661754	Msa0807680:CDS	35.0%
	TTGAAGTCTTGAACATGTCA+AGG	+	chr5_3:30662138-30662157	None:intergenic	35.0%
!	GGAAGCATACAATAACTCAA+AGG	-	chr5_3:30662194-30662213	Msa0807680:CDS	35.0%
	TAACTCAAAGGATGAAGATG+TGG	-	chr5_3:30662206-30662225	Msa0807680:CDS	35.0%
	AATGTAACTTTGCTTCTACG+AGG	+	chr5_3:30662318-30662337	None:intergenic	35.0%
	AGCAAAGTTACATTAAGGAG+TGG	-	chr5_3:30662324-30662343	Msa0807680:intron	35.0%
	CTTCTACTTAAAAACCTTGG+AGG	+	chr5_3:30662384-30662403	None:intergenic	35.0%
!!!	CTCCAAGGTTTTTAAGTAGA+AGG	-	chr5_3:30662382-30662401	Msa0807680:intron	35.0%
	CACCTTCTACTTAAAAACCT+TGG	+	chr5_3:30662387-30662406	None:intergenic	35.0%
!!!	CAAGGTTTTTAAGTAGAAGG+TGG	-	chr5_3:30662385-30662404	Msa0807680:intron	35.0%
	ACATCAAGTGATTCAAGTCT+TGG	-	chr5_3:30662423-30662442	Msa0807680:intron	35.0%
!!	GAAATTGAATTCTGGTTTCC+CGG	+	chr5_3:30662481-30662500	None:intergenic	35.0%
!!	ATGTTCAGAAAGTGTTGTTG+TGG	-	chr5_3:30662515-30662534	Msa0807680:intron	35.0%
!!	TGTTCAGAAAGTGTTGTTGT+GGG	-	chr5_3:30662516-30662535	Msa0807680:intron	35.0%
!!	AAAGTGTTGTTGTGGGAAAA+TGG	-	chr5_3:30662523-30662542	Msa0807680:intron	35.0%
	CCCTTCATGTTTATCAAAGA+AGG	-	chr5_3:30662552-30662571	Msa0807680:intron	35.0%
	AGATTACACTAGAGCAGAAA+TGG	-	chr5_3:30662622-30662641	Msa0807680:intron	35.0%
	GATTACACTAGAGCAGAAAT+GGG	-	chr5_3:30662623-30662642	Msa0807680:intron	35.0%
	AAAGAAGTGGTTGTAATTGC+TGG	-	chr5_3:30662717-30662736	Msa0807680:intron	35.0%
	AAGAAGTGGTTGTAATTGCT+GGG	-	chr5_3:30662718-30662737	Msa0807680:intron	35.0%
	TGTTGGAGAAAAGAACAATG+TGG	-	chr5_3:30662809-30662828	Msa0807680:intron	35.0%
	GTTGGAGAAAAGAACAATGT+GGG	-	chr5_3:30662810-30662829	Msa0807680:intron	35.0%
	CAATAGTTGAGAGAATGAAG+TGG	-	chr5_3:30662844-30662863	Msa0807680:intron	35.0%
!	ATGATGGTGTTTGAAAGCAT+AGG	+	chr5_3:30663030-30663049	None:intergenic	35.0%
!!!	GTAGAAGTTTTGGTTTGCTT+GGG	+	chr5_3:30663277-30663296	None:intergenic	35.0%
!!!	AGTAGAAGTTTTGGTTTGCT+TGG	+	chr5_3:30663278-30663297	None:intergenic	35.0%
!!!	ACCAACATCTTGTTTTGGGT+TGG	-	chr5_3:30661326-30661345	Msa0807680:three_prime_UTR	40.0%
!!!	CCAACATCTTGTTTTGGGTT+GGG	-	chr5_3:30661327-30661346	Msa0807680:three_prime_UTR	40.0%
!!	GGAGAGTACCATGAAGTTAA+GGG	-	chr5_3:30661348-30661367	Msa0807680:three_prime_UTR	40.0%
	AAGGCAAACCCTTAACTTCA+TGG	+	chr5_3:30661359-30661378	None:intergenic	40.0%
!!!	AGGTTCATGTTTTGAGGGAA+AGG	+	chr5_3:30661378-30661397	None:intergenic	40.0%
!!	GCTCAAGGTTCATGTTTTGA+GGG	+	chr5_3:30661383-30661402	None:intergenic	40.0%
!	AGCTCAAGGTTCATGTTTTG+AGG	+	chr5_3:30661384-30661403	None:intergenic	40.0%
	GACAATGGCTGATTAAGAAC+TGG	+	chr5_3:30661468-30661487	None:intergenic	40.0%
	CATCTTCATGGCAAGAAAAG+AGG	-	chr5_3:30661510-30661529	Msa0807680:CDS	40.0%
	AAGCGGAATCCAAATAACAG+AGG	-	chr5_3:30661752-30661771	Msa0807680:CDS	40.0%
	CTTAAGGGCGGAATTAAAGA+TGG	-	chr5_3:30661809-30661828	Msa0807680:CDS	40.0%
	AACTCATGCACATGTACTCA+CGG	+	chr5_3:30661949-30661968	None:intergenic	40.0%
	TATCTCTATTACCCTGAACG+TGG	+	chr5_3:30662073-30662092	None:intergenic	40.0%
	GCTAAATCTGTTGCTGAAGA+TGG	-	chr5_3:30662354-30662373	Msa0807680:intron	40.0%
	CGCTGTTGTTCAAAAAGAAG+TGG	-	chr5_3:30662704-30662723	Msa0807680:intron	40.0%
	GAACAATGTGGGTTTGAGTA+TGG	-	chr5_3:30662821-30662840	Msa0807680:intron	40.0%
	TTGAAGGGACTAATAAGGGA+TGG	-	chr5_3:30662934-30662953	Msa0807680:intron	40.0%
	AGCAAATGGGAATGAATGTC+TGG	-	chr5_3:30663059-30663078	Msa0807680:CDS	40.0%
!!!	ACCAACATCTTGTTTTGGGT+TGG	-	chr5_3:30661326-30661345	Msa0807680:three_prime_UTR	40.0%
!!!	CCAACATCTTGTTTTGGGTT+GGG	-	chr5_3:30661327-30661346	Msa0807680:three_prime_UTR	40.0%
!!	GGAGAGTACCATGAAGTTAA+GGG	-	chr5_3:30661348-30661367	Msa0807680:three_prime_UTR	40.0%
	AAGGCAAACCCTTAACTTCA+TGG	+	chr5_3:30661359-30661378	None:intergenic	40.0%
!!!	AGGTTCATGTTTTGAGGGAA+AGG	+	chr5_3:30661378-30661397	None:intergenic	40.0%
!!	GCTCAAGGTTCATGTTTTGA+GGG	+	chr5_3:30661383-30661402	None:intergenic	40.0%
!	AGCTCAAGGTTCATGTTTTG+AGG	+	chr5_3:30661384-30661403	None:intergenic	40.0%
	GACAATGGCTGATTAAGAAC+TGG	+	chr5_3:30661468-30661487	None:intergenic	40.0%
	CATCTTCATGGCAAGAAAAG+AGG	-	chr5_3:30661510-30661529	Msa0807680:CDS	40.0%
	AAGCGGAATCCAAATAACAG+AGG	-	chr5_3:30661752-30661771	Msa0807680:CDS	40.0%
	CTTAAGGGCGGAATTAAAGA+TGG	-	chr5_3:30661809-30661828	Msa0807680:CDS	40.0%
	AACTCATGCACATGTACTCA+CGG	+	chr5_3:30661949-30661968	None:intergenic	40.0%
	TATCTCTATTACCCTGAACG+TGG	+	chr5_3:30662073-30662092	None:intergenic	40.0%
	GCTAAATCTGTTGCTGAAGA+TGG	-	chr5_3:30662354-30662373	Msa0807680:intron	40.0%
	CGCTGTTGTTCAAAAAGAAG+TGG	-	chr5_3:30662704-30662723	Msa0807680:intron	40.0%
	GAACAATGTGGGTTTGAGTA+TGG	-	chr5_3:30662821-30662840	Msa0807680:intron	40.0%
	TTGAAGGGACTAATAAGGGA+TGG	-	chr5_3:30662934-30662953	Msa0807680:intron	40.0%
	AGCAAATGGGAATGAATGTC+TGG	-	chr5_3:30663059-30663078	Msa0807680:CDS	40.0%
!	AGGCCCTAATTCTGGTGTTT+TGG	-	chr5_3:30661281-30661300	Msa0807680:three_prime_UTR	45.0%
	CCCAACCCAAAACAAGATGT+TGG	+	chr5_3:30661330-30661349	None:intergenic	45.0%
!!	GGGAGAGTACCATGAAGTTA+AGG	-	chr5_3:30661347-30661366	Msa0807680:three_prime_UTR	45.0%
	ATCAAAGCAGGCGTCACTTA+AGG	-	chr5_3:30661793-30661812	Msa0807680:CDS	45.0%
	TCAAAGCAGGCGTCACTTAA+GGG	-	chr5_3:30661794-30661813	Msa0807680:CDS	45.0%
!!	TCAAGTCTTGGAGAAGCATC+AGG	-	chr5_3:30662435-30662454	Msa0807680:intron	45.0%
	AAGTGGTTGTAATTGCTGGG+TGG	-	chr5_3:30662721-30662740	Msa0807680:intron	45.0%
	AGTGGTTGTAATTGCTGGGT+GGG	-	chr5_3:30662722-30662741	Msa0807680:intron	45.0%
!!	ATGGCTTGGTGGGAAAGAAA+AGG	-	chr5_3:30662884-30662903	Msa0807680:intron	45.0%
!	AGGCCCTAATTCTGGTGTTT+TGG	-	chr5_3:30661281-30661300	Msa0807680:three_prime_UTR	45.0%
	CCCAACCCAAAACAAGATGT+TGG	+	chr5_3:30661330-30661349	None:intergenic	45.0%
!!	GGGAGAGTACCATGAAGTTA+AGG	-	chr5_3:30661347-30661366	Msa0807680:three_prime_UTR	45.0%
	ATCAAAGCAGGCGTCACTTA+AGG	-	chr5_3:30661793-30661812	Msa0807680:CDS	45.0%
	TCAAAGCAGGCGTCACTTAA+GGG	-	chr5_3:30661794-30661813	Msa0807680:CDS	45.0%
!!	TCAAGTCTTGGAGAAGCATC+AGG	-	chr5_3:30662435-30662454	Msa0807680:intron	45.0%
	AAGTGGTTGTAATTGCTGGG+TGG	-	chr5_3:30662721-30662740	Msa0807680:intron	45.0%
	AGTGGTTGTAATTGCTGGGT+GGG	-	chr5_3:30662722-30662741	Msa0807680:intron	45.0%
!!	ATGGCTTGGTGGGAAAGAAA+AGG	-	chr5_3:30662884-30662903	Msa0807680:intron	45.0%
	CTCTCATTACCTCCACCAGA+AGG	-	chr5_3:30661261-30661280	Msa0807680:three_prime_UTR	50.0%
	ACACCAGAATTAGGGCCTTC+TGG	+	chr5_3:30661279-30661298	None:intergenic	50.0%
	GCATCGTGCAACAGAGTTAG+AGG	+	chr5_3:30661977-30661996	None:intergenic	50.0%
	AACTCTGTTGCACGATGCAG+CGG	-	chr5_3:30661979-30661998	Msa0807680:CDS	50.0%
	CTGAAGATGGATACCCTCCA+AGG	-	chr5_3:30662367-30662386	Msa0807680:intron	50.0%
!!	TCTTGGAGAAGCATCAGGTG+TGG	-	chr5_3:30662440-30662459	Msa0807680:intron	50.0%
!!	TGAATTCTGGTTTCCCGGCA+CGG	+	chr5_3:30662476-30662495	None:intergenic	50.0%
	TGAGAGAATGAAGTGGGAGC+AGG	-	chr5_3:30662851-30662870	Msa0807680:intron	50.0%
	AATGAAGTGGGAGCAGGAGA+GGG	-	chr5_3:30662857-30662876	Msa0807680:intron	50.0%
	CTCTCATTACCTCCACCAGA+AGG	-	chr5_3:30661261-30661280	Msa0807680:three_prime_UTR	50.0%
	ACACCAGAATTAGGGCCTTC+TGG	+	chr5_3:30661279-30661298	None:intergenic	50.0%
	GCATCGTGCAACAGAGTTAG+AGG	+	chr5_3:30661977-30661996	None:intergenic	50.0%
	AACTCTGTTGCACGATGCAG+CGG	-	chr5_3:30661979-30661998	Msa0807680:CDS	50.0%
	CTGAAGATGGATACCCTCCA+AGG	-	chr5_3:30662367-30662386	Msa0807680:intron	50.0%
!!	TCTTGGAGAAGCATCAGGTG+TGG	-	chr5_3:30662440-30662459	Msa0807680:intron	50.0%
!!	TGAATTCTGGTTTCCCGGCA+CGG	+	chr5_3:30662476-30662495	None:intergenic	50.0%
	TGAGAGAATGAAGTGGGAGC+AGG	-	chr5_3:30662851-30662870	Msa0807680:intron	50.0%
	AATGAAGTGGGAGCAGGAGA+GGG	-	chr5_3:30662857-30662876	Msa0807680:intron	50.0%
	GAATTAGGGCCTTCTGGTGG+AGG	+	chr5_3:30661273-30661292	None:intergenic	55.0%
	CCAGAATTAGGGCCTTCTGG+TGG	+	chr5_3:30661276-30661295	None:intergenic	55.0%
	CCACCAGAAGGCCCTAATTC+TGG	-	chr5_3:30661273-30661292	Msa0807680:three_prime_UTR	55.0%
	AAGCAGGCGTCACTTAAGGG+CGG	-	chr5_3:30661797-30661816	Msa0807680:CDS	55.0%
	GCAGCGACTGCTAGAACTGT+TGG	+	chr5_3:30662051-30662070	None:intergenic	55.0%
	TGCTGGGTGGGAAGCTATGA+TGG	-	chr5_3:30662734-30662753	Msa0807680:intron	55.0%
	GAATGAAGTGGGAGCAGGAG+AGG	-	chr5_3:30662856-30662875	Msa0807680:intron	55.0%
!!	AGAGGGTTGGATGGCTTGGT+GGG	-	chr5_3:30662874-30662893	Msa0807680:intron	55.0%
	GAATTAGGGCCTTCTGGTGG+AGG	+	chr5_3:30661273-30661292	None:intergenic	55.0%
	CCAGAATTAGGGCCTTCTGG+TGG	+	chr5_3:30661276-30661295	None:intergenic	55.0%
	CCACCAGAAGGCCCTAATTC+TGG	-	chr5_3:30661273-30661292	Msa0807680:three_prime_UTR	55.0%
	AAGCAGGCGTCACTTAAGGG+CGG	-	chr5_3:30661797-30661816	Msa0807680:CDS	55.0%
	GCAGCGACTGCTAGAACTGT+TGG	+	chr5_3:30662051-30662070	None:intergenic	55.0%
	TGCTGGGTGGGAAGCTATGA+TGG	-	chr5_3:30662734-30662753	Msa0807680:intron	55.0%
	GAATGAAGTGGGAGCAGGAG+AGG	-	chr5_3:30662856-30662875	Msa0807680:intron	55.0%
!!	AGAGGGTTGGATGGCTTGGT+GGG	-	chr5_3:30662874-30662893	Msa0807680:intron	55.0%
	TAGCAGTCGCTGCCACGTTC+AGG	-	chr5_3:30662058-30662077	Msa0807680:CDS	60.0%
	AGCAGTCGCTGCCACGTTCA+GGG	-	chr5_3:30662059-30662078	Msa0807680:CDS	60.0%
	GTGGATGATTCCCTCCGTGC+CGG	-	chr5_3:30662459-30662478	Msa0807680:intron	60.0%
	TGGATGATTCCCTCCGTGCC+GGG	-	chr5_3:30662460-30662479	Msa0807680:intron	60.0%
!!	TTCTGGTTTCCCGGCACGGA+GGG	+	chr5_3:30662472-30662491	None:intergenic	60.0%
!!	ATTCTGGTTTCCCGGCACGG+AGG	+	chr5_3:30662473-30662492	None:intergenic	60.0%
	AAGTGGGAGCAGGAGAGGGT+TGG	-	chr5_3:30662861-30662880	Msa0807680:intron	60.0%
	CAGGAGAGGGTTGGATGGCT+TGG	-	chr5_3:30662870-30662889	Msa0807680:intron	60.0%
!	GAGAGGGTTGGATGGCTTGG+TGG	-	chr5_3:30662873-30662892	Msa0807680:intron	60.0%
	TAGCAGTCGCTGCCACGTTC+AGG	-	chr5_3:30662058-30662077	Msa0807680:CDS	60.0%
	AGCAGTCGCTGCCACGTTCA+GGG	-	chr5_3:30662059-30662078	Msa0807680:CDS	60.0%
	GTGGATGATTCCCTCCGTGC+CGG	-	chr5_3:30662459-30662478	Msa0807680:intron	60.0%
	TGGATGATTCCCTCCGTGCC+GGG	-	chr5_3:30662460-30662479	Msa0807680:intron	60.0%
!!	TTCTGGTTTCCCGGCACGGA+GGG	+	chr5_3:30662472-30662491	None:intergenic	60.0%
!!	ATTCTGGTTTCCCGGCACGG+AGG	+	chr5_3:30662473-30662492	None:intergenic	60.0%
	AAGTGGGAGCAGGAGAGGGT+TGG	-	chr5_3:30662861-30662880	Msa0807680:intron	60.0%
	CAGGAGAGGGTTGGATGGCT+TGG	-	chr5_3:30662870-30662889	Msa0807680:intron	60.0%
!	GAGAGGGTTGGATGGCTTGG+TGG	-	chr5_3:30662873-30662892	Msa0807680:intron	60.0%
	GGGAGCAGGAGAGGGTTGGA+TGG	-	chr5_3:30662865-30662884	Msa0807680:intron	65.0%
	GGGAGCAGGAGAGGGTTGGA+TGG	-	chr5_3:30662865-30662884	Msa0807680:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_3	gene	30661132	30663338	30661132	ID=Msa0807680;Name=Msa0807680
chr5_3	mRNA	30661132	30663338	30661132	ID=Msa0807680-mRNA-1;Parent=Msa0807680;Name=Msa0807680-mRNA-1;_AED=0.00;_eAED=0.00;_QI=81\|1\|1\|1\|1\|1\|2\|265\|399
chr5_3	exon	30661132	30662276	30661132	ID=Msa0807680-mRNA-1:exon:10231;Parent=Msa0807680-mRNA-1
chr5_3	exon	30662938	30663338	30662938	ID=Msa0807680-mRNA-1:exon:10230;Parent=Msa0807680-mRNA-1
chr5_3	five_prime_UTR	30663258	30663338	30663258	ID=Msa0807680-mRNA-1:five_prime_utr;Parent=Msa0807680-mRNA-1
chr5_3	CDS	30662938	30663257	30662938	ID=Msa0807680-mRNA-1:cds;Parent=Msa0807680-mRNA-1
chr5_3	CDS	30661397	30662276	30661397	ID=Msa0807680-mRNA-1:cds;Parent=Msa0807680-mRNA-1
chr5_3	three_prime_UTR	30661132	30661396	30661132	ID=Msa0807680-mRNA-1:three_prime_utr;Parent=Msa0807680-mRNA-1

Gene Sequence

>Msa0807680

ATGTATGTGACTAGGCCTCTTTCTTTGTACAAGAAGTCTGAAGAGGCTCTCTCATTACCTCCACCAGAAGGCCCTAATTCTGGTGTTTTGGTAATTCAAGATGATGATTTGAAACCAACATCTTGTTTTGGGTTGGGAGAGTACCATGAAGTTAAGGGTTTGCCTTTCCCTCAAAACATGAACCTTGAGCTGTTTTATAGATCAGGCATTTCTCTTAACAGAACTACTCATAAACACAATGTTGCCTTCATTCCAGTTCTTAATCAGCCATTGTCCTCCAATCAATACTATGTCATACATCTTCATGGCAAGAAAAGAGGGGAAGCATACAATAACTCAAAGGATGAAGATGTGGACACATTCTGTTTCTACAATTCTGTCTCTGAAGTACCAATTCATCCTTTAGATATCAGTGACAAATATCAAGAGTTCGAGATCTATCCTCGTAGAAGCAAAGTTACATTAAGGAGTGGTTTCTCAGCTAAATCTGTTGCTGAAGATGGATACCCTCCAAGGTTTTTAAGTAGAAGGTGGAAATTGAGTGCTTCAACATCAAGTGATTCAAGTCTTGGAGAAGCATCAGGTGTGGATGATTCCCTCCGTGCCGGGAAACCAGAATTCAATTTCTCTATAACAAACAGATGTTCAGAAAGTGTTGTTGTGGGAAAATGGTATTGTCCCTTCATGTTTATCAAAGAAGGAACTCACAGAACATTGAAAGAAGAAATGAGAAAATCAATGTTTTATGAGATTACACTAGAGCAGAAATGGGAACAAGTGTTTTCATGTGATAATGATGATGGTAAAAAGGGAAACATTGTGAATGTTGACGCTGTTGTTCAAAAAGAAGTGGTTGTAATTGCTGGGTGGGAAGCTATGATGGATAATAAGATGGATGTAGCTGAAAGTTTTTTGTGGTTTAATAGTATCAATAATGTTGGAGAAAAGAACAATGTGGGTTTGAGTATGGCAATAGTTGAGAGAATGAAGTGGGAGCAGGAGAGGGTTGGATGGCTTGGTGGGAAAGAAAAGGAATTTCAAGTTAAGAAAGTGGAAGAATTTGAAGGGACTAATAAGGGATGGAAAAAATTTGGATGTTATGTGTTGGTTGAGACTTTTGTTATAAAGAGATTGGATGGAAGCATAGTATTGACCTATGCTTTCAAACACCATCATCAATTAAGGAGCAAATGGGAATGA

Protein sequence

>Msa0807680

MYVTRPLSLYKKSEEALSLPPPEGPNSGVLVIQDDDLKPTSCFGLGEYHEVKGLPFPQNMNLELFYRSGISLNRTTHKHNVAFIPVLNQPLSSNQYYVIHLHGKKRGEAYNNSKDEDVDTFCFYNSVSEVPIHPLDISDKYQEFEIYPRRSKVTLRSGFSAKSVAEDGYPPRFLSRRWKLSASTSSDSSLGEASGVDDSLRAGKPEFNFSITNRCSESVVVGKWYCPFMFIKEGTHRTLKEEMRKSMFYEITLEQKWEQVFSCDNDDGKKGNIVNVDAVVQKEVVVIAGWEAMMDNKMDVAESFLWFNSINNVGEKNNVGLSMAIVERMKWEQERVGWLGGKEKEFQVKKVEEFEGTNKGWKKFGCYVLVETFVIKRLDGSIVLTYAFKHHHQLRSKWE*