Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0824310 | sp|F4K3G5|EDM2_ARATH | 50.469 | 426 | 181 | 10 | 23 | 426 | 18 | 435 | 1.48e-128 | 428 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0824310 | G7K4B2 | 90.500 | 1179 | 91 | 5 | 1 | 1168 | 1 | 1169 | 0.0 | 2127 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0101810 | Msa0824310 | -0.800137 | 1.659919e-48 | -8.615850e-47 |
Msa0697200 | Msa0824310 | 0.809086 | 2.250756e-50 | -8.615850e-47 |
Msa0736060 | Msa0824310 | 0.811763 | 5.948339e-51 | -8.615850e-47 |
Msa0787480 | Msa0824310 | 0.846619 | 1.938329e-59 | -8.615850e-47 |
Msa0815180 | Msa0824310 | 0.801024 | 1.094133e-48 | -8.615850e-47 |
Msa0824310 | Msa0844900 | 0.803879 | 2.823626e-49 | -8.615850e-47 |
Msa0824310 | Msa0961420 | -0.805177 | 1.513972e-49 | -8.615850e-47 |
Msa0824310 | Msa1083410 | 0.808297 | 3.318472e-50 | -8.615850e-47 |
Msa0448550 | Msa0824310 | -0.804651 | 1.950549e-49 | -8.615850e-47 |
Msa0465680 | Msa0824310 | -0.807252 | 5.534957e-50 | -8.615850e-47 |
Msa0566500 | Msa0824310 | -0.801921 | 7.168428e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0824310 | MtrunA17_Chr5g0445101 | 90.500 | 1179 | 91 | 5 | 1 | 1168 | 1 | 1169 | 0.0 | 2127 |
Msa0824310 | MtrunA17_Chr3g0100331 | 52.305 | 499 | 187 | 10 | 15 | 480 | 7 | 487 | 4.14e-159 | 506 |
Msa0824310 | MtrunA17_Chr3g0100331 | 38.365 | 159 | 77 | 7 | 867 | 1006 | 492 | 648 | 2.41e-12 | 71.6 |
Msa0824310 | MtrunA17_Chr8g0336661 | 46.718 | 259 | 111 | 4 | 213 | 445 | 306 | 563 | 4.91e-72 | 261 |
Msa0824310 | MtrunA17_Chr8g0336661 | 38.272 | 162 | 94 | 2 | 61 | 216 | 49 | 210 | 1.38e-26 | 118 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0824310 | AT5G55390.3 | 50.469 | 426 | 181 | 10 | 23 | 426 | 18 | 435 | 1.50e-129 | 428 |
Msa0824310 | AT5G55390.2 | 50.469 | 426 | 181 | 10 | 23 | 426 | 18 | 435 | 1.50e-129 | 428 |
Msa0824310 | AT5G55390.1 | 50.469 | 426 | 181 | 10 | 23 | 426 | 18 | 435 | 1.50e-129 | 428 |
Msa0824310 | AT5G48090.1 | 33.762 | 311 | 134 | 11 | 168 | 426 | 3 | 293 | 5.54e-41 | 162 |
Msa0824310 | AT5G48090.3 | 36.214 | 243 | 103 | 8 | 217 | 426 | 29 | 252 | 1.65e-39 | 157 |
Msa0824310 | AT5G48090.2 | 36.214 | 243 | 103 | 8 | 217 | 426 | 29 | 252 | 1.65e-39 | 157 |
Find 215 sgRNAs with CRISPR-Local
Find 456 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTAATGTACATTTAGATTT+TGG | 0.149061 | 5_3:-63452601 | Msa0824310:three_prime_UTR |
TCAGATCTTTCATTTGATTT+TGG | 0.177111 | 5_3:+63453691 | None:intergenic |
GCCTTCACAGAAGGATTTAT+TGG | 0.186595 | 5_3:-63458850 | Msa0824310:CDS |
GTAGGCTTCATCTTCTTATT+AGG | 0.208478 | 5_3:+63455020 | None:intergenic |
AATATTATGGATGGTGATTC+TGG | 0.211883 | 5_3:-63452990 | Msa0824310:CDS |
AATGCTGTTTGTAGCTCTTA+TGG | 0.220957 | 5_3:-63458879 | Msa0824310:intron |
GCAAGATATCTGACTAATTT+AGG | 0.224313 | 5_3:+63452567 | None:intergenic |
CCTGATTGTCGTGCTTTATT+TGG | 0.234766 | 5_3:+63453572 | None:intergenic |
TTGTCTGGGAAAGTGATTTC+TGG | 0.236951 | 5_3:-63453733 | Msa0824310:CDS |
GCTACTCGTAAATCAAAATT+TGG | 0.248096 | 5_3:-63452720 | Msa0824310:CDS |
AACTTATTTGATTTGATTCC+GGG | 0.250788 | 5_3:+63453788 | None:intergenic |
TTATTAGAAGTATTGATTTC+CGG | 0.256914 | 5_3:+63454087 | None:intergenic |
TTATTAGAAGTATTGATTTC+CGG | 0.256914 | 5_3:+63454324 | None:intergenic |
TTATTAGAAGTATTGATTTC+CGG | 0.256914 | 5_3:+63454561 | None:intergenic |
TTATTAGAAGTATTGATTTC+CGG | 0.256914 | 5_3:+63454798 | None:intergenic |
AAAGGAAATCCACGACATTA+AGG | 0.268743 | 5_3:-63459756 | Msa0824310:CDS |
ACATACATCAACTTCCTTCT+TGG | 0.270303 | 5_3:+63456805 | None:intergenic |
AAACTGCCTTCTAGTAAAAT+TGG | 0.274549 | 5_3:-63454198 | Msa0824310:CDS |
AAACTGCCTTCTAGTAAAAT+TGG | 0.274549 | 5_3:-63454672 | Msa0824310:CDS |
AAACTGCCTTCTAGTAAAAT+TGG | 0.274549 | 5_3:-63454909 | Msa0824310:CDS |
ATGCTGTTTGTAGCTCTTAT+GGG | 0.294420 | 5_3:-63458878 | Msa0824310:intron |
TTGTGTGCTTCTATGAATAA+AGG | 0.301317 | 5_3:-63453601 | Msa0824310:CDS |
GTTTAAATGGAGCGCTTCTA+AGG | 0.301906 | 5_3:-63459635 | Msa0824310:CDS |
AAACTGCCTTCTAGCAAAAT+TGG | 0.302139 | 5_3:-63454435 | Msa0824310:CDS |
TATTGGCTTAGCTAATTCTA+AGG | 0.304463 | 5_3:-63458790 | Msa0824310:intron |
CTTGACATTTCCTTTGATTC+CGG | 0.305090 | 5_3:+63453889 | None:intergenic |
TTGCATGGATCTGCTGATAA+TGG | 0.306430 | 5_3:-63459571 | Msa0824310:CDS |
AAATTTGCACCCATCCATTC+AGG | 0.309814 | 5_3:-63452681 | Msa0824310:CDS |
CGGAAACATGCTTAACTAAT+GGG | 0.315501 | 5_3:+63455554 | None:intergenic |
GTTGGCTGCTGAAAATATTA+TGG | 0.320999 | 5_3:-63453003 | Msa0824310:CDS |
GTTGGCTTTGTTAAATCATC+TGG | 0.325538 | 5_3:-63454018 | Msa0824310:CDS |
GCATGGAAGTTTGATCTAAC+TGG | 0.326461 | 5_3:-63459520 | Msa0824310:CDS |
TCGGAAACATGCTTAACTAA+TGG | 0.342529 | 5_3:+63455553 | None:intergenic |
ATGATATTGCAACAAGGGCT+TGG | 0.360196 | 5_3:-63455260 | Msa0824310:CDS |
AAACTTATTTGATTTGATTC+CGG | 0.367262 | 5_3:+63453787 | None:intergenic |
CGTTGTTGTCGAAAGATAAA+AGG | 0.370169 | 5_3:-63459480 | Msa0824310:CDS |
AAGTCAAATTCAAATTTGTC+TGG | 0.370296 | 5_3:-63453748 | Msa0824310:CDS |
CACCCATCCATTCAGGTGGT+TGG | 0.371904 | 5_3:-63452674 | Msa0824310:CDS |
CGTACATGTGACCATGCTCC+TGG | 0.380370 | 5_3:+63453033 | None:intergenic |
CCTGTTTGTCTTGAGTCTCC+TGG | 0.383586 | 5_3:+63452871 | None:intergenic |
ACACTTACAAGCAATATATA+AGG | 0.388898 | 5_3:+63455211 | None:intergenic |
TATATAAGGATACGATTGTT+TGG | 0.390253 | 5_3:+63455225 | None:intergenic |
GGAAAACTGCCTTCTAAAAC+TGG | 0.394213 | 5_3:-63453964 | Msa0824310:CDS |
TCAACTCTCTCTGTAGTTGT+AGG | 0.394419 | 5_3:+63454291 | None:intergenic |
GTTGGCTCTGTTAAATCATC+TGG | 0.398623 | 5_3:-63454255 | Msa0824310:CDS |
GTTGGCTCTGTTAAATCATC+TGG | 0.398623 | 5_3:-63454729 | Msa0824310:CDS |
TGCATGGATCTGCTGATAAT+GGG | 0.399149 | 5_3:-63459570 | Msa0824310:CDS |
TCAACGCTCTCTGTAGTTGT+AGG | 0.402831 | 5_3:+63454528 | None:intergenic |
TTTCTTGTTCAGATATTTCA+AGG | 0.404687 | 5_3:-63453813 | Msa0824310:CDS |
GAAGCTACTACAAGAGATAT+TGG | 0.409358 | 5_3:-63458807 | Msa0824310:CDS |
TTCTAACAGGCATGATCGAC+AGG | 0.411514 | 5_3:+63453527 | None:intergenic |
GGAACAGTGGCTCTAGTGTC+GGG | 0.412789 | 5_3:+63454345 | None:intergenic |
GGAACAGTGGCTCTAGTGTC+GGG | 0.412789 | 5_3:+63454819 | None:intergenic |
AAAGTTGATGATAGCGAAAA+GGG | 0.419421 | 5_3:-63459607 | Msa0824310:CDS |
TCTACTGAAAAGATCGAATC+TGG | 0.422460 | 5_3:-63453931 | Msa0824310:CDS |
GAATCTTTATGTGATTCTCT+TGG | 0.422617 | 5_3:-63456833 | Msa0824310:CDS |
CATTTGCGATGATATGACTT+TGG | 0.424216 | 5_3:+63455406 | None:intergenic |
GGAACAGTAGCTCTAGTGTT+GGG | 0.424954 | 5_3:+63454108 | None:intergenic |
TTTACCTCACACTTGGCCAT+TGG | 0.425784 | 5_3:+63453646 | None:intergenic |
TGCTTTGCATGTGGCGAGCT+GGG | 0.428860 | 5_3:-63456642 | Msa0824310:CDS |
GTTGGCTCTGTTAAATCATC+TGG | 0.429177 | 5_3:-63454492 | Msa0824310:CDS |
ATGCTTTGCATGTGGCGAGC+TGG | 0.434494 | 5_3:-63456643 | Msa0824310:CDS |
TGATATTGCAACAAGGGCTT+GGG | 0.436796 | 5_3:-63455259 | Msa0824310:CDS |
AACGCTTTATTGAGATGAAA+AGG | 0.436927 | 5_3:-63459774 | None:intergenic |
CAAAGTTGATGATAGCGAAA+AGG | 0.440091 | 5_3:-63459608 | Msa0824310:CDS |
AAGGAAATCCACGACATTAA+GGG | 0.440617 | 5_3:-63459755 | Msa0824310:CDS |
TGCTAGATCCTCAATATTGT+TGG | 0.443141 | 5_3:-63453267 | Msa0824310:CDS |
GGAGGCAATACACTTCTAAC+AGG | 0.443800 | 5_3:+63453514 | None:intergenic |
TTAGAAGCGCTCCATTTAAA+CGG | 0.444864 | 5_3:+63459637 | None:intergenic |
GTTGGGAGATGTTGAGGATA+AGG | 0.445980 | 5_3:-63453222 | Msa0824310:CDS |
ACAACGCTCTCTGTAGTTGT+AGG | 0.446925 | 5_3:+63454765 | None:intergenic |
CGACACTAGAGCCACTGTTC+CGG | 0.451598 | 5_3:-63454343 | Msa0824310:CDS |
CGACACTAGAGCCACTGTTC+CGG | 0.451598 | 5_3:-63454817 | Msa0824310:CDS |
CTCAAAGAATTCGTCTGAAA+AGG | 0.454422 | 5_3:-63453839 | Msa0824310:CDS |
CTGGATGCTGATTCAGAGAA+AGG | 0.455585 | 5_3:-63453490 | Msa0824310:CDS |
CCAAATAAAGCACGACAATC+AGG | 0.457304 | 5_3:-63453572 | Msa0824310:CDS |
AATCTGGTTCAGATATTTCA+AGG | 0.457360 | 5_3:-63453915 | Msa0824310:CDS |
TTGGATCATATGTCTCTGAT+TGG | 0.460855 | 5_3:-63458831 | Msa0824310:CDS |
TGCTACTAAGGCGGATGGTA+GGG | 0.466724 | 5_3:-63456855 | Msa0824310:CDS |
CAAATTTCTTGCAGGTGTGA+TGG | 0.470181 | 5_3:-63456899 | Msa0824310:intron |
CCGACACTAGATATAGTGTT+CGG | 0.474683 | 5_3:-63455055 | Msa0824310:CDS |
TTTAATATATTAACGTAAGA+GGG | 0.476473 | 5_3:-63452627 | Msa0824310:three_prime_UTR |
GGAACAGTGTCTCTAGTGTC+GGG | 0.479680 | 5_3:+63454582 | None:intergenic |
AAATATTACGGAGAGTAAGC+TGG | 0.480063 | 5_3:-63453096 | Msa0824310:CDS |
AAATCAATACTTCTAATAAG+AGG | 0.480522 | 5_3:-63454320 | Msa0824310:CDS |
AAATCAATACTTCTAATAAG+AGG | 0.480522 | 5_3:-63454557 | Msa0824310:CDS |
AAATCAATACTTCTAATAAG+AGG | 0.480522 | 5_3:-63454794 | Msa0824310:CDS |
CGGAACAGTGTCTCTAGTGT+CGG | 0.481130 | 5_3:+63454581 | None:intergenic |
CGACACTAGATATAGTGTTC+GGG | 0.482018 | 5_3:-63455054 | Msa0824310:CDS |
AAAACGAGCTGGATGCTTGT+TGG | 0.482114 | 5_3:+63452746 | None:intergenic |
CAACACTAGAGCTACTGTTC+CGG | 0.482229 | 5_3:-63454106 | Msa0824310:CDS |
TTGCTGTGTCTGTGAAGGCT+TGG | 0.483076 | 5_3:-63455476 | Msa0824310:CDS |
GACTTTAAGAGATCATGATT+CGG | 0.484219 | 5_3:+63452954 | None:intergenic |
AGGTCGACGATGCAGATAAT+CGG | 0.485330 | 5_3:-63453552 | Msa0824310:CDS |
CCAGGAGACTCAAGACAAAC+AGG | 0.485498 | 5_3:-63452871 | Msa0824310:CDS |
CGAACACTATATCTAGTGTC+GGG | 0.489317 | 5_3:+63455056 | None:intergenic |
ATATTATGGATGGTGATTCT+GGG | 0.490562 | 5_3:-63452989 | Msa0824310:CDS |
ATGCTACTAAGGCGGATGGT+AGG | 0.492844 | 5_3:-63456856 | Msa0824310:CDS |
GGCCATTACAATGAGGAAGC+TGG | 0.493545 | 5_3:-63453201 | Msa0824310:CDS |
ATCAAATGAAAGATCTGAAA+CGG | 0.494136 | 5_3:-63453686 | Msa0824310:CDS |
GTTGAATTGAAGAACAATGT+TGG | 0.496363 | 5_3:-63454036 | Msa0824310:CDS |
GAGCCAACCACCTGAATGGA+TGG | 0.496619 | 5_3:+63452671 | None:intergenic |
ATGAGATCAGTGATGAGCTT+GGG | 0.498461 | 5_3:-63455106 | Msa0824310:CDS |
CGGAACAGTGGCTCTAGTGT+CGG | 0.498689 | 5_3:+63454344 | None:intergenic |
CGGAACAGTGGCTCTAGTGT+CGG | 0.498689 | 5_3:+63454818 | None:intergenic |
CGAGTAGCTGCAAAACGAGC+TGG | 0.499101 | 5_3:+63452735 | None:intergenic |
CTTCGAGCCAACCACCTGAA+TGG | 0.501610 | 5_3:+63452667 | None:intergenic |
CAAACTGCAAATTGCAACTC+AGG | 0.505005 | 5_3:+63455439 | None:intergenic |
CGACACTAGAGACACTGTTC+CGG | 0.505654 | 5_3:-63454580 | Msa0824310:CDS |
ATCCAGCTTCCTCATTGTAA+TGG | 0.510430 | 5_3:+63453199 | None:intergenic |
ATACTTCTAATAAGAGGAAG+AGG | 0.512282 | 5_3:-63454551 | Msa0824310:CDS |
TTCAAGGACACCGGAATCAA+AGG | 0.514134 | 5_3:-63453899 | Msa0824310:CDS |
CAATACTTCTAATAAGAGGA+TGG | 0.514603 | 5_3:-63454790 | Msa0824310:CDS |
GAGGTCATTTCATGCTACTA+AGG | 0.515381 | 5_3:-63456867 | Msa0824310:CDS |
AGTTTCATCCCTTAATGTCG+TGG | 0.516017 | 5_3:+63459747 | None:intergenic |
TGAAGGCTTGGAAAATAAGA+TGG | 0.518997 | 5_3:-63455464 | Msa0824310:CDS |
TCAACTCTCTCTGTAGATGT+AGG | 0.522483 | 5_3:+63454054 | None:intergenic |
AGTCAAATTCAAATTTGTCT+GGG | 0.523249 | 5_3:-63453747 | Msa0824310:CDS |
GTTGAATTGAAGAACAATGT+TGG | 0.525380 | 5_3:-63454273 | Msa0824310:CDS |
GCAGAAGGATCTAAAGTGAC+TGG | 0.527295 | 5_3:-63454459 | Msa0824310:CDS |
GCAGAAGGATCTAAAGTGAC+TGG | 0.527295 | 5_3:-63454696 | Msa0824310:CDS |
GCACACAATTTCTGACCAGT+TGG | 0.529045 | 5_3:+63453616 | None:intergenic |
GCAGAAGGATCTAAAGTGAC+TGG | 0.529446 | 5_3:-63454222 | Msa0824310:CDS |
GCAGAAGGATCTAAAGTGAC+TGG | 0.529446 | 5_3:-63454933 | Msa0824310:CDS |
TTCAGATATTTCAAGGAACC+CGG | 0.530643 | 5_3:-63453806 | Msa0824310:CDS |
TGTACATGTGACCATGCTCC+TGG | 0.533097 | 5_3:+63453138 | None:intergenic |
CACACAATTTCTGACCAGTT+GGG | 0.534596 | 5_3:+63453617 | None:intergenic |
CTTATCACTGGCCTCTTCAA+AGG | 0.538365 | 5_3:+63454401 | None:intergenic |
ATACTTCTAATAAGAGGATG+AGG | 0.539745 | 5_3:-63454314 | Msa0824310:CDS |
TTCGACAACAACGATACCTC+GGG | 0.542400 | 5_3:+63459490 | None:intergenic |
GTTGTATTGAAGAACAATGT+TGG | 0.542736 | 5_3:-63454747 | Msa0824310:CDS |
TAGATCCTCAATATTGTTGG+AGG | 0.547376 | 5_3:-63453264 | Msa0824310:CDS |
CGGAACAGTAGCTCTAGTGT+TGG | 0.550429 | 5_3:+63454107 | None:intergenic |
TGGGTTTAAGCCTTCACAGA+AGG | 0.553969 | 5_3:-63458859 | Msa0824310:CDS |
ACATGATGGTAACGCTGACC+AGG | 0.555035 | 5_3:-63452889 | Msa0824310:CDS |
TGGATGCTGATTCAGAGAAA+GGG | 0.555256 | 5_3:-63453489 | Msa0824310:intron |
CATTGATGATATTGCAACAA+GGG | 0.560467 | 5_3:-63455265 | Msa0824310:CDS |
TAGAAGTGTATTGCCTCCAC+TGG | 0.561132 | 5_3:-63453509 | Msa0824310:CDS |
CACACCCTCCAACAATATTG+AGG | 0.562258 | 5_3:+63453259 | None:intergenic |
TCCAATAAATCCTTCTGTGA+AGG | 0.562858 | 5_3:+63458849 | None:intergenic |
ATCAGATGGTTTCTGATACC+CGG | 0.566808 | 5_3:+63457737 | None:intergenic |
CATGAGATCAGTGATGAGCT+TGG | 0.567016 | 5_3:-63455107 | Msa0824310:CDS |
AGGAGTCTCAAGCTTATCAC+TGG | 0.567487 | 5_3:+63454152 | None:intergenic |
AGGAGTCTCAAGCTTATCAC+TGG | 0.567487 | 5_3:+63454389 | None:intergenic |
AGGAGTCTCAAGCTTATCAC+TGG | 0.567487 | 5_3:+63454626 | None:intergenic |
CAGGAGCATGGTCACATGTA+CGG | 0.568783 | 5_3:-63453032 | Msa0824310:CDS |
AGGAGTCTCAAGCTTATCAC+TGG | 0.569049 | 5_3:+63454863 | None:intergenic |
AATACTTCTAATAAGAGGAT+GGG | 0.569208 | 5_3:-63454789 | Msa0824310:CDS |
GCACAAGTTGGGAGATGTTG+AGG | 0.575629 | 5_3:-63453228 | Msa0824310:CDS |
TGCAATGTGGATGATAGAAA+CGG | 0.577256 | 5_3:+63455581 | None:intergenic |
TTCTCTGAATCAGCATCCAG+TGG | 0.578278 | 5_3:+63453493 | None:intergenic |
GCACATAGATCTAATGTGAC+CGG | 0.583259 | 5_3:-63453985 | Msa0824310:CDS |
TCTGGCAAGAGCACTGCAGA+AGG | 0.583541 | 5_3:-63454237 | Msa0824310:CDS |
CTTATCACTGGCCTCTTCAG+AGG | 0.587077 | 5_3:+63454164 | None:intergenic |
CTTATCACTGGCCTCTTCAG+AGG | 0.587077 | 5_3:+63454638 | None:intergenic |
TCTGACAAGAGCACTGCAGA+AGG | 0.590358 | 5_3:-63454948 | Msa0824310:CDS |
ATGCAACAAACCTCATCAGA+TGG | 0.590404 | 5_3:+63457723 | None:intergenic |
TTCAGATATTTCAAGGACAC+CGG | 0.592573 | 5_3:-63453908 | Msa0824310:CDS |
CCGAACACTATATCTAGTGT+CGG | 0.592728 | 5_3:+63455055 | None:intergenic |
GTACATGTGACCATGCTCCT+GGG | 0.597289 | 5_3:+63453034 | None:intergenic |
TAAACAGAAGGTAGTAGACC+AGG | 0.600048 | 5_3:-63453156 | Msa0824310:CDS |
ATGAAGCCTACAACTACAGA+GGG | 0.601758 | 5_3:-63455008 | Msa0824310:CDS |
TGATGAAGACTCAAAAGTAG+AGG | 0.606537 | 5_3:-63457538 | Msa0824310:CDS |
TGTTGTCGAAAGATAAAAGG+TGG | 0.608701 | 5_3:-63459477 | Msa0824310:CDS |
TATTATGGATGGTGATTCTG+GGG | 0.611629 | 5_3:-63452988 | Msa0824310:CDS |
CAGCATCAATGCTTTGCATG+TGG | 0.612556 | 5_3:-63456651 | Msa0824310:CDS |
TTTCGACAACAACGATACCT+CGG | 0.613923 | 5_3:+63459489 | None:intergenic |
AAAGTCATAGCCCAGGAGCA+TGG | 0.615793 | 5_3:-63453044 | Msa0824310:CDS |
AGAAAGGCAATTGAAAAGCA+TGG | 0.615795 | 5_3:-63452786 | Msa0824310:CDS |
TGATAAAGATAAAGATGCTG+AGG | 0.617526 | 5_3:-63456613 | Msa0824310:intron |
AGCCAACCACCTGAATGGAT+GGG | 0.618326 | 5_3:+63452672 | None:intergenic |
TGGATGATAGAAACGGTCAC+AGG | 0.618593 | 5_3:+63455588 | None:intergenic |
TCTGGCAAGAGCATTGCAGA+AGG | 0.620198 | 5_3:-63454474 | Msa0824310:CDS |
TCTGGCAAGAGCATTGCAGA+AGG | 0.620198 | 5_3:-63454711 | Msa0824310:CDS |
TTTGCACCCATCCATTCAGG+TGG | 0.621598 | 5_3:-63452678 | Msa0824310:CDS |
ATTAGTTAAGCATGTTTCCG+AGG | 0.622307 | 5_3:-63455551 | Msa0824310:CDS |
AAGGTAGTAGACCAGGAGCA+TGG | 0.623141 | 5_3:-63453149 | Msa0824310:CDS |
GAACAGTAGCTCTAGTGTTG+GGG | 0.624834 | 5_3:+63454109 | None:intergenic |
AGTATTGATTTCCGGAACAG+TGG | 0.628769 | 5_3:+63454332 | None:intergenic |
AGTATTGATTTCCGGAACAG+TGG | 0.628769 | 5_3:+63454806 | None:intergenic |
TGACTTGACTACTAAACAGA+AGG | 0.634313 | 5_3:-63453168 | Msa0824310:CDS |
TTTCATGCTACTAAGGCGGA+TGG | 0.635516 | 5_3:-63456860 | Msa0824310:CDS |
AGATCCTCAATATTGTTGGA+GGG | 0.636517 | 5_3:-63453263 | Msa0824310:CDS |
GCTGCTGAAAATATTATGGA+TGG | 0.638442 | 5_3:-63452999 | Msa0824310:CDS |
GTCATTTCATGCTACTAAGG+CGG | 0.639994 | 5_3:-63456864 | Msa0824310:CDS |
CAAGCCAATGGCCAAGTGTG+AGG | 0.640616 | 5_3:-63453650 | Msa0824310:CDS |
AATGTCAAGTAAGTGTGTGA+CGG | 0.642271 | 5_3:-63453875 | Msa0824310:CDS |
GTTGAATTGAAGAACAACGT+TGG | 0.643408 | 5_3:-63454510 | Msa0824310:CDS |
AAACTGCAAATTGCAACTCA+GGG | 0.647686 | 5_3:+63455440 | None:intergenic |
CTTATCACTGGTCTCTCCAG+AGG | 0.650001 | 5_3:+63454875 | None:intergenic |
ATTGCAACAAGGGCTTGGGA+AGG | 0.650225 | 5_3:-63455255 | Msa0824310:CDS |
GGAAACATGCTTAACTAATG+GGG | 0.652661 | 5_3:+63455555 | None:intergenic |
TCTGAATCAGCATCCAGTGG+AGG | 0.655053 | 5_3:+63453496 | None:intergenic |
GTATCAGAAACCATCTGATG+AGG | 0.656415 | 5_3:-63457733 | Msa0824310:intron |
GAACAGTGGCTCTAGTGTCG+GGG | 0.663261 | 5_3:+63454346 | None:intergenic |
GAACAGTGTCTCTAGTGTCG+GGG | 0.663261 | 5_3:+63454583 | None:intergenic |
GAACAGTGGCTCTAGTGTCG+GGG | 0.663261 | 5_3:+63454820 | None:intergenic |
TGTGCATTGTGCGACAATGG+TGG | 0.663369 | 5_3:-63457495 | Msa0824310:CDS |
TATCATCTCGAAGACAACGA+TGG | 0.663743 | 5_3:-63459685 | Msa0824310:CDS |
GAACACTATATCTAGTGTCG+GGG | 0.663913 | 5_3:+63455057 | None:intergenic |
GATGATATGACTTTGGACAA+CGG | 0.668026 | 5_3:+63455413 | None:intergenic |
TCACATGTACAGTGACAAGT+TGG | 0.674269 | 5_3:-63453126 | Msa0824310:CDS |
GGATCAAGCTTCAGAAACCG+AGG | 0.675718 | 5_3:-63459456 | Msa0824310:CDS |
AAGTTGATGATAGCGAAAAG+GGG | 0.678266 | 5_3:-63459606 | Msa0824310:CDS |
ACATTGATGATATTGCAACA+AGG | 0.679482 | 5_3:-63455266 | Msa0824310:CDS |
GATGAAGCCTACAACTACAG+AGG | 0.681264 | 5_3:-63455009 | Msa0824310:CDS |
AGGATAAGGCCATTACAATG+AGG | 0.684721 | 5_3:-63453208 | Msa0824310:CDS |
TCACATGTACGGTGACAAGT+TGG | 0.688440 | 5_3:-63453021 | Msa0824310:CDS |
ACTAATGGGGCAATGCAATG+TGG | 0.689247 | 5_3:+63455568 | None:intergenic |
AAAGACTCAACAGATAATCG+AGG | 0.689659 | 5_3:+63459364 | None:intergenic |
TCTAACAGGCATGATCGACA+GGG | 0.691509 | 5_3:+63453528 | None:intergenic |
GAAGCCTACAACTACAGAGG+GGG | 0.698643 | 5_3:-63455006 | Msa0824310:CDS |
TCTAACTGGTATGAAACCCG+AGG | 0.718528 | 5_3:-63459506 | Msa0824310:CDS |
GGTGTGATGGAGCATGCATG+AGG | 0.736595 | 5_3:-63456886 | Msa0824310:CDS |
TGAAGCCTACAACTACAGAG+GGG | 0.764333 | 5_3:-63455007 | Msa0824310:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAATTTATAATATATTTA+AGG | - | chr5_3:63454693-63454712 | Msa0824310:CDS | 0.0% |
!! | AAATTTAATCATTCAAAATA+TGG | - | chr5_3:63453589-63453608 | Msa0824310:CDS | 10.0% |
!! | AAATTTAAAAATATTTGTTC+AGG | - | chr5_3:63454438-63454457 | Msa0824310:CDS | 10.0% |
!! | AAAAAAAAATTAGGATATAT+TGG | + | chr5_3:63455362-63455381 | None:intergenic | 10.0% |
!! | TTTCATCTTAATATAAAATT+TGG | + | chr5_3:63455838-63455857 | None:intergenic | 10.0% |
!! | TTTCAATTATCTAATCATAA+TGG | + | chr5_3:63453294-63453313 | None:intergenic | 15.0% |
!! | ATTAGATAATTGAAAATGTT+TGG | - | chr5_3:63453299-63453318 | Msa0824310:intron | 15.0% |
!!! | ATATATGATTTTAGTTTCAT+AGG | - | chr5_3:63453871-63453890 | Msa0824310:CDS | 15.0% |
!!! | TAGTTTTTTGAATTTTGAAT+GGG | - | chr5_3:63453917-63453936 | Msa0824310:CDS | 15.0% |
!!! | CAAGAAATTTTTAAAAAATC+AGG | - | chr5_3:63455057-63455076 | Msa0824310:CDS | 15.0% |
!!! | AAATGGTAAAAACTTTTTAT+GGG | + | chr5_3:63455339-63455358 | None:intergenic | 15.0% |
!! | AAAAACTTTGTCAAAAATTT+AGG | + | chr5_3:63456370-63456389 | None:intergenic | 15.0% |
!! | AAAAAAAAAGACAATTAAAC+AGG | + | chr5_3:63456559-63456578 | None:intergenic | 15.0% |
!!! | TTGTCTTTTTTTTTTTTATC+TGG | - | chr5_3:63456565-63456584 | Msa0824310:intron | 15.0% |
!! | TTGATTGATTAAGATATTAA+TGG | - | chr5_3:63456600-63456619 | Msa0824310:intron | 15.0% |
!!! | ATTAAGATATTAATGGTTTT+TGG | - | chr5_3:63456607-63456626 | Msa0824310:intron | 15.0% |
!! | TAACTTCATTTATCATTATT+TGG | - | chr5_3:63457169-63457188 | Msa0824310:intron | 15.0% |
!! | AATTGATAAAAATGATAGAA+AGG | - | chr5_3:63459506-63459525 | Msa0824310:CDS | 15.0% |
!!! | TTTTAATATATTAACGTAAG+AGG | - | chr5_3:63459680-63459699 | Msa0824310:CDS | 15.0% |
!! | TTTAATATATTAACGTAAGA+GGG | - | chr5_3:63459681-63459700 | Msa0824310:CDS | 15.0% |
!! | ATGCAAATGATTTAGTATTT+GGG | - | chr5_3:63453028-63453047 | Msa0824310:CDS | 20.0% |
!! | AACAATTTATGCAAATAAAC+AGG | + | chr5_3:63453183-63453202 | None:intergenic | 20.0% |
!!! | AAATTTTCATTTTCCTTAAG+TGG | - | chr5_3:63453700-63453719 | Msa0824310:CDS | 20.0% |
!!! | GTAGTTTTTTGAATTTTGAA+TGG | - | chr5_3:63453916-63453935 | Msa0824310:CDS | 20.0% |
!! | TTCAGATTGAATAAAAAATG+AGG | + | chr5_3:63454051-63454070 | None:intergenic | 20.0% |
!!! | TTTTTTATTCAATCTGAATG+AGG | - | chr5_3:63454053-63454072 | Msa0824310:CDS | 20.0% |
!! | ACAAACTATTCGTTAATTTA+AGG | + | chr5_3:63454288-63454307 | None:intergenic | 20.0% |
!!! | AGAACTTTGTTATGAATAAT+AGG | - | chr5_3:63454904-63454923 | Msa0824310:CDS | 20.0% |
!! | ATATAGACAATTCAAATTAG+TGG | + | chr5_3:63455251-63455270 | None:intergenic | 20.0% |
!! | TTATGGGAGATAAATTTAAA+TGG | + | chr5_3:63455323-63455342 | None:intergenic | 20.0% |
!!! | GAAATGGTAAAAACTTTTTA+TGG | + | chr5_3:63455340-63455359 | None:intergenic | 20.0% |
!! | AAATTAGGATATATTGGAAA+TGG | + | chr5_3:63455356-63455375 | None:intergenic | 20.0% |
!!! | TTGTTTTAAAAAGACTAACT+AGG | + | chr5_3:63455804-63455823 | None:intergenic | 20.0% |
!! | TGACTTAATTCATATTGTAT+AGG | - | chr5_3:63456974-63456993 | Msa0824310:intron | 20.0% |
!! | GACTTAATTCATATTGTATA+GGG | - | chr5_3:63456975-63456994 | Msa0824310:intron | 20.0% |
!! | ACTTAATTCATATTGTATAG+GGG | - | chr5_3:63456976-63456995 | Msa0824310:intron | 20.0% |
!!! | AATTTTATATGATCTCTTAC+AGG | + | chr5_3:63457231-63457250 | None:intergenic | 20.0% |
!!! | AATTTTATATGATCTCTTAC+AGG | + | chr5_3:63457231-63457250 | None:intergenic | 20.0% |
!!! | TTATTAGAAGTATTGATTTC+CGG | + | chr5_3:63457513-63457532 | None:intergenic | 20.0% |
!! | AAATCAATACTTCTAATAAG+AGG | - | chr5_3:63457514-63457533 | Msa0824310:CDS | 20.0% |
!!! | AATTTTATATGATCTCTTAC+AGG | + | chr5_3:63457231-63457250 | None:intergenic | 20.0% |
!!! | TTATTAGAAGTATTGATTTC+CGG | + | chr5_3:63457513-63457532 | None:intergenic | 20.0% |
!! | AAATCAATACTTCTAATAAG+AGG | - | chr5_3:63457514-63457533 | Msa0824310:CDS | 20.0% |
!!! | AATTTTATATGAACTCTTAC+AGG | + | chr5_3:63457942-63457961 | None:intergenic | 20.0% |
!!! | TTATTAGAAGTATTGATTTC+CGG | + | chr5_3:63457513-63457532 | None:intergenic | 20.0% |
!! | AAATCAATACTTCTAATAAG+AGG | - | chr5_3:63457514-63457533 | Msa0824310:CDS | 20.0% |
!!! | AATTTTATATGATCTCTTAC+AGG | + | chr5_3:63457231-63457250 | None:intergenic | 20.0% |
!!! | TTATTAGAAGTATTGATTTC+CGG | + | chr5_3:63457513-63457532 | None:intergenic | 20.0% |
!!! | AAACTTATTTGATTTGATTC+CGG | + | chr5_3:63458524-63458543 | None:intergenic | 20.0% |
!!! | TTTTTCTTACTTTCATTTAC+AGG | + | chr5_3:63459393-63459412 | None:intergenic | 20.0% |
!!! | TGTAATGTACATTTAGATTT+TGG | - | chr5_3:63459707-63459726 | Msa0824310:CDS | 20.0% |
!! | TTTCTGTTTTACCGTTTAAA+TGG | - | chr5_3:63452660-63452679 | Msa0824310:exon | 25.0% |
! | GATGCAAATGATTTAGTATT+TGG | - | chr5_3:63453027-63453046 | Msa0824310:CDS | 25.0% |
! | TGCAAATGATTTAGTATTTG+GGG | - | chr5_3:63453029-63453048 | Msa0824310:CDS | 25.0% |
! | AAAAAATAAGCCAATCCAAA+CGG | + | chr5_3:63453055-63453074 | None:intergenic | 25.0% |
!! | TTTTTGAATTTTGAATGGGA+TGG | - | chr5_3:63453921-63453940 | Msa0824310:CDS | 25.0% |
!!! | GTTTACATTGTTATTTGAGT+GGG | - | chr5_3:63453993-63454012 | Msa0824310:CDS | 25.0% |
! | ACTAGCTCAAAGAATAAATA+AGG | + | chr5_3:63454088-63454107 | None:intergenic | 25.0% |
! | AGAATATCAAGTTCAAGAAT+TGG | - | chr5_3:63454134-63454153 | Msa0824310:CDS | 25.0% |
!!! | GATTTTTGATAGTGCTTTAT+TGG | - | chr5_3:63454190-63454209 | Msa0824310:CDS | 25.0% |
!!! | ATTTGCACACATCTTATTTT+TGG | - | chr5_3:63454342-63454361 | Msa0824310:CDS | 25.0% |
!!! | ACACATCTTATTTTTGGATA+AGG | - | chr5_3:63454348-63454367 | Msa0824310:CDS | 25.0% |
!!! | CACATCTTATTTTTGGATAA+GGG | - | chr5_3:63454349-63454368 | Msa0824310:CDS | 25.0% |
! | ATTAAAATGAAGTACACATG+TGG | + | chr5_3:63454501-63454520 | None:intergenic | 25.0% |
! | GTATGAATTCTTCTTCATAT+TGG | - | chr5_3:63454848-63454867 | Msa0824310:CDS | 25.0% |
!!! | TACTAAAAAGCATCATTAGT+CGG | + | chr5_3:63454940-63454959 | None:intergenic | 25.0% |
!!! | ACTAATGATGCTTTTTAGTA+TGG | - | chr5_3:63454940-63454959 | Msa0824310:CDS | 25.0% |
!! | TTATTGTCTGAAACTCATAT+GGG | + | chr5_3:63455152-63455171 | None:intergenic | 25.0% |
!! | TTTATTGTCTGAAACTCATA+TGG | + | chr5_3:63455153-63455172 | None:intergenic | 25.0% |
! | TATAGTTCATCTGTATCTTT+AGG | + | chr5_3:63455214-63455233 | None:intergenic | 25.0% |
! | TTTAGAGATGATTCAAAGTA+GGG | + | chr5_3:63455294-63455313 | None:intergenic | 25.0% |
! | AAAGTTAACAAATTTCTTGC+AGG | - | chr5_3:63455401-63455420 | Msa0824310:CDS | 25.0% |
! | AAAAAGACTAACTAGGATAA+CGG | + | chr5_3:63455797-63455816 | None:intergenic | 25.0% |
!! | TCATGTGTAATTGAAGATTT+TGG | - | chr5_3:63455893-63455912 | Msa0824310:intron | 25.0% |
! | TAATTCAAATTAACCGAATG+AGG | + | chr5_3:63456292-63456311 | None:intergenic | 25.0% |
!!! | ATTATTTTTCTCAAGATCCT+CGG | + | chr5_3:63456777-63456796 | None:intergenic | 25.0% |
! | TTGAGAAAAATAATGCTGAT+GGG | - | chr5_3:63456783-63456802 | Msa0824310:intron | 25.0% |
! | CTTAATTCATATTGTATAGG+GGG | - | chr5_3:63456977-63456996 | Msa0824310:intron | 25.0% |
! | TATATAAGGATACGATTGTT+TGG | + | chr5_3:63457086-63457105 | None:intergenic | 25.0% |
! | ACACTTACAAGCAATATATA+AGG | + | chr5_3:63457100-63457119 | None:intergenic | 25.0% |
! | ATTAACAAGGACAAATTTGA+AGG | + | chr5_3:63457141-63457160 | None:intergenic | 25.0% |
! | ATGATAAATGAAGTTACACA+GGG | + | chr5_3:63457165-63457184 | None:intergenic | 25.0% |
! | AATGATAAATGAAGTTACAC+AGG | + | chr5_3:63457166-63457185 | None:intergenic | 25.0% |
! | AATACTTCTAATAAGAGGAT+GGG | - | chr5_3:63457519-63457538 | Msa0824310:CDS | 25.0% |
! | TTTCTTGTTCAGATATTTCA+AGG | - | chr5_3:63458495-63458514 | Msa0824310:intron | 25.0% |
!!! | AACTTATTTGATTTGATTCC+GGG | + | chr5_3:63458523-63458542 | None:intergenic | 25.0% |
! | AAGTCAAATTCAAATTTGTC+TGG | - | chr5_3:63458560-63458579 | Msa0824310:intron | 25.0% |
! | AGTCAAATTCAAATTTGTCT+GGG | - | chr5_3:63458561-63458580 | Msa0824310:intron | 25.0% |
!!! | TCAGATCTTTCATTTGATTT+TGG | + | chr5_3:63458620-63458639 | None:intergenic | 25.0% |
! | ATCAAATGAAAGATCTGAAA+CGG | - | chr5_3:63458622-63458641 | Msa0824310:intron | 25.0% |
! | TAATATTTGTCACTACAATG+CGG | - | chr5_3:63458917-63458936 | Msa0824310:intron | 25.0% |
!!! | TACATTTAGATTTTGGAGTA+TGG | - | chr5_3:63459714-63459733 | Msa0824310:CDS | 25.0% |
!! | AAAGTTGATGATAGCGAAAA+GGG | - | chr5_3:63452701-63452720 | Msa0824310:CDS | 30.0% |
! | GATTATCTGTTGAGTCTTTT+TGG | - | chr5_3:63452948-63452967 | Msa0824310:CDS | 30.0% |
AAAAATAAGCCAATCCAAAC+AGG | - | chr5_3:63453215-63453234 | Msa0824310:CDS | 30.0% | |
! | TTTAAAGTCAAACACATCAG+CGG | - | chr5_3:63453339-63453358 | Msa0824310:intron | 30.0% |
!! | TATTGGCTTAGCTAATTCTA+AGG | - | chr5_3:63453518-63453537 | Msa0824310:CDS | 30.0% |
AGATATTGTGATGTTGAACT+TGG | - | chr5_3:63453560-63453579 | Msa0824310:CDS | 30.0% | |
ACAAGTACAATTTGAATCTC+AGG | + | chr5_3:63453619-63453638 | None:intergenic | 30.0% | |
AATAAGCCAAAAACAAACAC+AGG | + | chr5_3:63453781-63453800 | None:intergenic | 30.0% | |
!!! | TTTTTGGCTTATTGTCTTCT+TGG | - | chr5_3:63453788-63453807 | Msa0824310:CDS | 30.0% |
GTACAAAATCAGCAATGATA+TGG | - | chr5_3:63453819-63453838 | Msa0824310:CDS | 30.0% | |
! | GTTATTTGAGTCAAAAGCAT+TGG | - | chr5_3:63453971-63453990 | Msa0824310:CDS | 30.0% |
!! | GGTTTACATTGTTATTTGAG+TGG | - | chr5_3:63453992-63454011 | Msa0824310:CDS | 30.0% |
ATGCACGAAACTAAATAACT+CGG | - | chr5_3:63454025-63454044 | Msa0824310:CDS | 30.0% | |
TGAATATTGCAAAGTAGTGT+TGG | - | chr5_3:63454221-63454240 | Msa0824310:CDS | 30.0% | |
GAGCAAAGAGATTGTATTAA+AGG | + | chr5_3:63454264-63454283 | None:intergenic | 30.0% | |
! | CTTTGTTTGATTATGATGCT+GGG | - | chr5_3:63454461-63454480 | Msa0824310:CDS | 30.0% |
! | CTTTAGAGATGATTCAAAGT+AGG | + | chr5_3:63455295-63455314 | None:intergenic | 30.0% |
GAATCTTTATGTGATTCTCT+TGG | - | chr5_3:63455475-63455494 | Msa0824310:CDS | 30.0% | |
AGTTTCTACATCATTATCTG+AGG | + | chr5_3:63455570-63455589 | None:intergenic | 30.0% | |
TGATAAAGATAAAGATGCTG+AGG | - | chr5_3:63455695-63455714 | Msa0824310:intron | 30.0% | |
AAAAGACTAACTAGGATAAC+GGG | + | chr5_3:63455796-63455815 | None:intergenic | 30.0% | |
! | GTTATGTTTGTGACATCTTT+TGG | - | chr5_3:63455915-63455934 | Msa0824310:intron | 30.0% |
TACATATATCCCAAATGAGA+AGG | - | chr5_3:63456073-63456092 | Msa0824310:intron | 30.0% | |
ACATATATCCCAAATGAGAA+GGG | - | chr5_3:63456074-63456093 | Msa0824310:intron | 30.0% | |
!! | TAATTTGTTCTTTGTCCTTC+TGG | - | chr5_3:63456133-63456152 | Msa0824310:intron | 30.0% |
! | AATTTGTTCTTTGTCCTTCT+GGG | - | chr5_3:63456134-63456153 | Msa0824310:intron | 30.0% |
AGAATCAAATACAACCTACA+TGG | + | chr5_3:63456263-63456282 | None:intergenic | 30.0% | |
! | AAGCCTTATATAGAAGTATG+AGG | - | chr5_3:63456321-63456340 | Msa0824310:intron | 30.0% |
TTGCCTCATACTTCTATATA+AGG | + | chr5_3:63456327-63456346 | None:intergenic | 30.0% | |
CTCAACTATTCAAAAACTGT+CGG | + | chr5_3:63456420-63456439 | None:intergenic | 30.0% | |
! | TAGAGCTTTGATATGCTTTA+TGG | - | chr5_3:63456646-63456665 | Msa0824310:CDS | 30.0% |
CTTGAGAAAAATAATGCTGA+TGG | - | chr5_3:63456782-63456801 | Msa0824310:intron | 30.0% | |
GAAAAAGATAGAACTTACGT+AGG | + | chr5_3:63456932-63456951 | None:intergenic | 30.0% | |
!!! | GTTGATTCTGAAGTTGATTT+TGG | - | chr5_3:63456999-63457018 | Msa0824310:intron | 30.0% |
! | ACATTGATGATATTGCAACA+AGG | - | chr5_3:63457042-63457061 | Msa0824310:intron | 30.0% |
! | CATTGATGATATTGCAACAA+GGG | - | chr5_3:63457043-63457062 | Msa0824310:intron | 30.0% |
TATTGCTTGTAAGTGTTATG+TGG | - | chr5_3:63457104-63457123 | Msa0824310:intron | 30.0% | |
AAACTGCCTTCTAGTAAAAT+TGG | - | chr5_3:63457399-63457418 | Msa0824310:intron | 30.0% | |
CAATACTTCTAATAAGAGGA+TGG | - | chr5_3:63457518-63457537 | Msa0824310:CDS | 30.0% | |
GTTGTATTGAAGAACAATGT+TGG | - | chr5_3:63457561-63457580 | Msa0824310:CDS | 30.0% | |
AAACTGCCTTCTAGTAAAAT+TGG | - | chr5_3:63457399-63457418 | Msa0824310:intron | 30.0% | |
ATACTTCTAATAAGAGGAAG+AGG | - | chr5_3:63457757-63457776 | Msa0824310:CDS | 30.0% | |
ATACTTCTAATAAGAGGATG+AGG | - | chr5_3:63457520-63457539 | Msa0824310:CDS | 30.0% | |
GTTGAATTGAAGAACAATGT+TGG | - | chr5_3:63458035-63458054 | Msa0824310:intron | 30.0% | |
AAACTGCCTTCTAGTAAAAT+TGG | - | chr5_3:63457399-63457418 | Msa0824310:intron | 30.0% | |
GTTGAATTGAAGAACAATGT+TGG | - | chr5_3:63458035-63458054 | Msa0824310:intron | 30.0% | |
!!! | TTTTTGCTACCAGTTTTAGA+AGG | + | chr5_3:63458356-63458375 | None:intergenic | 30.0% |
! | AATCTGGTTCAGATATTTCA+AGG | - | chr5_3:63458393-63458412 | Msa0824310:intron | 30.0% |
TTTGACTAAAAACAAGCCAA+TGG | - | chr5_3:63458646-63458665 | Msa0824310:intron | 30.0% | |
TTGTGTGCTTCTATGAATAA+AGG | - | chr5_3:63458707-63458726 | Msa0824310:intron | 30.0% | |
! | TGTGATAAAAAAGCACAAGT+TGG | - | chr5_3:63459068-63459087 | Msa0824310:intron | 30.0% |
! | GTGATAAAAAAGCACAAGTT+GGG | - | chr5_3:63459069-63459088 | Msa0824310:intron | 30.0% |
GTTGGCTGCTAAAAATATTA+CGG | - | chr5_3:63459200-63459219 | Msa0824310:intron | 30.0% | |
AATATTATGGATGGTGATTC+TGG | - | chr5_3:63459318-63459337 | Msa0824310:intron | 30.0% | |
ATATTATGGATGGTGATTCT+GGG | - | chr5_3:63459319-63459338 | Msa0824310:intron | 30.0% | |
! | GACTTTAAGAGATCATGATT+CGG | + | chr5_3:63459357-63459376 | None:intergenic | 30.0% |
AAGAAAAAAAGCTCACATGA+TGG | - | chr5_3:63459405-63459424 | Msa0824310:CDS | 30.0% | |
GCTACTCGTAAATCAAAATT+TGG | - | chr5_3:63459588-63459607 | Msa0824310:CDS | 30.0% | |
GCAAGATATCTGACTAATTT+AGG | + | chr5_3:63459744-63459763 | None:intergenic | 30.0% | |
AAAGGAAATCCACGACATTA+AGG | - | chr5_3:63452552-63452571 | Msa0824310:three_prime_UTR | 35.0% | |
AAGGAAATCCACGACATTAA+GGG | - | chr5_3:63452553-63452572 | Msa0824310:three_prime_UTR | 35.0% | |
GGTAAAACAGAAAAACACAC+AGG | + | chr5_3:63452653-63452672 | None:intergenic | 35.0% | |
!! | TTAGAAGCGCTCCATTTAAA+CGG | + | chr5_3:63452674-63452693 | None:intergenic | 35.0% |
! | CTTTTCGCTATCATCAACTT+TGG | + | chr5_3:63452702-63452721 | None:intergenic | 35.0% |
!! | CAAAGTTGATGATAGCGAAA+AGG | - | chr5_3:63452700-63452719 | Msa0824310:CDS | 35.0% |
!! | AAGTTGATGATAGCGAAAAG+GGG | - | chr5_3:63452702-63452721 | Msa0824310:CDS | 35.0% |
!! | GGGTTGAAGATATTTTTGCA+TGG | - | chr5_3:63452722-63452741 | Msa0824310:CDS | 35.0% |
! | TTTTCATGGAGGTTATTGCA+TGG | - | chr5_3:63452771-63452790 | Msa0824310:CDS | 35.0% |
CGTTGTTGTCGAAAGATAAA+AGG | - | chr5_3:63452828-63452847 | Msa0824310:CDS | 35.0% | |
TGTTGTCGAAAGATAAAAGG+TGG | - | chr5_3:63452831-63452850 | Msa0824310:CDS | 35.0% | |
!! | GTTTTCTGAAAGCTTTTCCT+CGG | + | chr5_3:63452872-63452891 | None:intergenic | 35.0% |
AAAGACTCAACAGATAATCG+AGG | + | chr5_3:63452947-63452966 | None:intergenic | 35.0% | |
! | AAGGATTTGAGGTATTTCTC+TGG | - | chr5_3:63452989-63453008 | Msa0824310:CDS | 35.0% |
! | TAATGGTGATGATTGACTGA+CGG | + | chr5_3:63453277-63453296 | None:intergenic | 35.0% |
! | AATGCTGTTTGTAGCTCTTA+TGG | - | chr5_3:63453429-63453448 | Msa0824310:intron | 35.0% |
! | ATGCTGTTTGTAGCTCTTAT+GGG | - | chr5_3:63453430-63453449 | Msa0824310:intron | 35.0% |
TCCAATAAATCCTTCTGTGA+AGG | + | chr5_3:63453462-63453481 | None:intergenic | 35.0% | |
TTGGATCATATGTCTCTGAT+TGG | - | chr5_3:63453477-63453496 | Msa0824310:intron | 35.0% | |
GAAGCTACTACAAGAGATAT+TGG | - | chr5_3:63453501-63453520 | Msa0824310:CDS | 35.0% | |
!! | AAACCACCTGTGTTTGTTTT+TGG | - | chr5_3:63453772-63453791 | Msa0824310:CDS | 35.0% |
!! | TATTGTCTTCTTGGTTTTCG+AGG | - | chr5_3:63453797-63453816 | Msa0824310:CDS | 35.0% |
TCAAGAATTGGATTCCTTAC+AGG | - | chr5_3:63454146-63454165 | Msa0824310:CDS | 35.0% | |
TTATGCAGTTCAATCCTGTA+AGG | + | chr5_3:63454163-63454182 | None:intergenic | 35.0% | |
TTACAGGATTGAACTGCATA+AGG | - | chr5_3:63454162-63454181 | Msa0824310:CDS | 35.0% | |
!! | TATTGCAAAGTAGTGTTGGT+TGG | - | chr5_3:63454225-63454244 | Msa0824310:CDS | 35.0% |
TGTGCAAAAGAACGACTAAA+AGG | + | chr5_3:63454384-63454403 | None:intergenic | 35.0% | |
!! | GCTTTGTTTGATTATGATGC+TGG | - | chr5_3:63454460-63454479 | Msa0824310:CDS | 35.0% |
! | AGCTTTTGCTCTCAGTTTTA+GGG | - | chr5_3:63454541-63454560 | Msa0824310:CDS | 35.0% |
AGGTTATACGTCTTGATTTC+AGG | - | chr5_3:63454713-63454732 | Msa0824310:CDS | 35.0% | |
TGATGAAGACTCAAAAGTAG+AGG | - | chr5_3:63454770-63454789 | Msa0824310:CDS | 35.0% | |
TAGTATGGTGTGCAATAATC+TGG | - | chr5_3:63454955-63454974 | Msa0824310:CDS | 35.0% | |
AGTATGGTGTGCAATAATCT+GGG | - | chr5_3:63454956-63454975 | Msa0824310:CDS | 35.0% | |
TATGCCCCACATAAATTTAG+TGG | - | chr5_3:63455124-63455143 | Msa0824310:intron | 35.0% | |
ATGCCCCACATAAATTTAGT+GGG | - | chr5_3:63455125-63455144 | Msa0824310:intron | 35.0% | |
! | ATGATTCAAAGTAGGGCATT+TGG | + | chr5_3:63455287-63455306 | None:intergenic | 35.0% |
!!! | TTCTCTTGGTTTTACCAAGA+AGG | - | chr5_3:63455489-63455508 | Msa0824310:CDS | 35.0% |
ACATACATCAACTTCCTTCT+TGG | + | chr5_3:63455506-63455525 | None:intergenic | 35.0% | |
TTCTACATCATTATCTGAGG+TGG | + | chr5_3:63455567-63455586 | None:intergenic | 35.0% | |
!! | TCCTGCAATTATTTTGCAAC+AGG | + | chr5_3:63455600-63455619 | None:intergenic | 35.0% |
AAAGACTAACTAGGATAACG+GGG | + | chr5_3:63455795-63455814 | None:intergenic | 35.0% | |
!!! | CTGATTTTCTTTGACTTGCT+AGG | - | chr5_3:63455995-63456014 | Msa0824310:intron | 35.0% |
CATATATCCCAAATGAGAAG+GGG | - | chr5_3:63456075-63456094 | Msa0824310:intron | 35.0% | |
! | CGACAGTTTTTGAATAGTTG+AGG | - | chr5_3:63456418-63456437 | Msa0824310:intron | 35.0% |
GTATTCTTTCAAGCACAATC+AGG | + | chr5_3:63456460-63456479 | None:intergenic | 35.0% | |
GATATGCTACATAATGTGCA+AGG | + | chr5_3:63456482-63456501 | None:intergenic | 35.0% | |
CATCAAAATCAACACATCAC+AGG | + | chr5_3:63456527-63456546 | None:intergenic | 35.0% | |
! | AGGGGGATTCTCAAAATTTT+AGG | + | chr5_3:63456673-63456692 | None:intergenic | 35.0% |
ACATTTAAAGACCTGAAAGG+GGG | + | chr5_3:63456690-63456709 | None:intergenic | 35.0% | |
CACATTTAAAGACCTGAAAG+GGG | + | chr5_3:63456691-63456710 | None:intergenic | 35.0% | |
GCACATTTAAAGACCTGAAA+GGG | + | chr5_3:63456692-63456711 | None:intergenic | 35.0% | |
AGCACATTTAAAGACCTGAA+AGG | + | chr5_3:63456693-63456712 | None:intergenic | 35.0% | |
TGCAATGTGGATGATAGAAA+CGG | + | chr5_3:63456730-63456749 | None:intergenic | 35.0% | |
GGAAACATGCTTAACTAATG+GGG | + | chr5_3:63456756-63456775 | None:intergenic | 35.0% | |
CGGAAACATGCTTAACTAAT+GGG | + | chr5_3:63456757-63456776 | None:intergenic | 35.0% | |
TCGGAAACATGCTTAACTAA+TGG | + | chr5_3:63456758-63456777 | None:intergenic | 35.0% | |
ATTAGTTAAGCATGTTTCCG+AGG | - | chr5_3:63456757-63456776 | Msa0824310:intron | 35.0% | |
CAGACACAGCAAAAATGAAT+TGG | + | chr5_3:63456824-63456843 | None:intergenic | 35.0% | |
TGAAGGCTTGGAAAATAAGA+TGG | - | chr5_3:63456844-63456863 | Msa0824310:CDS | 35.0% | |
AAACTGCAAATTGCAACTCA+GGG | + | chr5_3:63456871-63456890 | None:intergenic | 35.0% | |
GATGATATGACTTTGGACAA+CGG | + | chr5_3:63456898-63456917 | None:intergenic | 35.0% | |
CATTTGCGATGATATGACTT+TGG | + | chr5_3:63456905-63456924 | None:intergenic | 35.0% | |
GTAGGCTTCATCTTCTTATT+AGG | + | chr5_3:63457291-63457310 | None:intergenic | 35.0% | |
! | TTGCTGCCAATTTTACTAGA+AGG | + | chr5_3:63457408-63457427 | None:intergenic | 35.0% |
! | TTGCTGCCAATTTTACTAGA+AGG | + | chr5_3:63457408-63457427 | None:intergenic | 35.0% |
GTTGAATTGAAGAACAACGT+TGG | - | chr5_3:63457798-63457817 | Msa0824310:intron | 35.0% | |
AAACTGCCTTCTAGCAAAAT+TGG | - | chr5_3:63457873-63457892 | Msa0824310:intron | 35.0% | |
! | TTGCTGCCAATTTTACTAGA+AGG | + | chr5_3:63457408-63457427 | None:intergenic | 35.0% |
!! | GTTGGCTTTGTTAAATCATC+TGG | - | chr5_3:63458290-63458309 | Msa0824310:intron | 35.0% |
!!! | AGTTTTAGAAGGCAGTTTTC+CGG | + | chr5_3:63458345-63458364 | None:intergenic | 35.0% |
TCTACTGAAAAGATCGAATC+TGG | - | chr5_3:63458377-63458396 | Msa0824310:intron | 35.0% | |
TTCAGATATTTCAAGGACAC+CGG | - | chr5_3:63458400-63458419 | Msa0824310:intron | 35.0% | |
CTTGACATTTCCTTTGATTC+CGG | + | chr5_3:63458422-63458441 | None:intergenic | 35.0% | |
AATGTCAAGTAAGTGTGTGA+CGG | - | chr5_3:63458433-63458452 | Msa0824310:intron | 35.0% | |
! | CTTTTCAGACGAATTCTTTG+AGG | + | chr5_3:63458471-63458490 | None:intergenic | 35.0% |
CTCAAAGAATTCGTCTGAAA+AGG | - | chr5_3:63458469-63458488 | Msa0824310:intron | 35.0% | |
TTCAGATATTTCAAGGAACC+CGG | - | chr5_3:63458502-63458521 | Msa0824310:intron | 35.0% | |
ATCCCAAGTACATAAGCTAA+CGG | + | chr5_3:63458983-63459002 | None:intergenic | 35.0% | |
TGCTAGATCCTCAATATTGT+TGG | - | chr5_3:63459041-63459060 | Msa0824310:intron | 35.0% | |
TAGATCCTCAATATTGTTGG+AGG | - | chr5_3:63459044-63459063 | Msa0824310:intron | 35.0% | |
AGATCCTCAATATTGTTGGA+GGG | - | chr5_3:63459045-63459064 | Msa0824310:intron | 35.0% | |
TGACTTGACTACTAAACAGA+AGG | - | chr5_3:63459140-63459159 | Msa0824310:intron | 35.0% | |
AAATATTACGGAGAGTAAGC+TGG | - | chr5_3:63459212-63459231 | Msa0824310:intron | 35.0% | |
TAAACAAAAAGTCATAGCCC+AGG | - | chr5_3:63459257-63459276 | Msa0824310:intron | 35.0% | |
GTTGGCTGCTGAAAATATTA+TGG | - | chr5_3:63459305-63459324 | Msa0824310:intron | 35.0% | |
GCTGCTGAAAATATTATGGA+TGG | - | chr5_3:63459309-63459328 | Msa0824310:intron | 35.0% | |
TATTATGGATGGTGATTCTG+GGG | - | chr5_3:63459320-63459339 | Msa0824310:intron | 35.0% | |
AGAAAGGCAATTGAAAAGCA+TGG | - | chr5_3:63459522-63459541 | Msa0824310:CDS | 35.0% | |
AGTTTCATCCCTTAATGTCG+TGG | + | chr5_3:63452564-63452583 | None:intergenic | 40.0% | |
TATCATCTCGAAGACAACGA+TGG | - | chr5_3:63452623-63452642 | Msa0824310:three_prime_UTR | 40.0% | |
! | GTTTAAATGGAGCGCTTCTA+AGG | - | chr5_3:63452673-63452692 | Msa0824310:CDS | 40.0% |
TTGCATGGATCTGCTGATAA+TGG | - | chr5_3:63452737-63452756 | Msa0824310:CDS | 40.0% | |
TGCATGGATCTGCTGATAAT+GGG | - | chr5_3:63452738-63452757 | Msa0824310:CDS | 40.0% | |
GCATGGAAGTTTGATCTAAC+TGG | - | chr5_3:63452788-63452807 | Msa0824310:CDS | 40.0% | |
TTTCGACAACAACGATACCT+CGG | + | chr5_3:63452822-63452841 | None:intergenic | 40.0% | |
!!! | TTTTTGGAGCAACATGTGCA+AGG | - | chr5_3:63452964-63452983 | Msa0824310:CDS | 40.0% |
TGTGCAAGGATAAGGATTTG+AGG | - | chr5_3:63452978-63452997 | Msa0824310:CDS | 40.0% | |
! | ATTTAGTATTTGGGGCCGTT+TGG | - | chr5_3:63453037-63453056 | Msa0824310:CDS | 40.0% |
GCCTTCACAGAAGGATTTAT+TGG | - | chr5_3:63453458-63453477 | Msa0824310:intron | 40.0% | |
AAGCCAAAAACAAACACAGG+TGG | + | chr5_3:63453778-63453797 | None:intergenic | 40.0% | |
! | ATTTTGAATGGGATGGTGTC+TGG | - | chr5_3:63453928-63453947 | Msa0824310:CDS | 40.0% |
!! | CATTGTTATTTGAGTGGGAG+AGG | - | chr5_3:63453998-63454017 | Msa0824310:CDS | 40.0% |
! | CAGCTTTTGCTCTCAGTTTT+AGG | - | chr5_3:63454540-63454559 | Msa0824310:CDS | 40.0% |
!! | GCTTTTGCTCTCAGTTTTAG+GGG | - | chr5_3:63454542-63454561 | Msa0824310:CDS | 40.0% |
ATCAGATGGTTTCTGATACC+CGG | + | chr5_3:63454574-63454593 | None:intergenic | 40.0% | |
GTATCAGAAACCATCTGATG+AGG | - | chr5_3:63454575-63454594 | Msa0824310:CDS | 40.0% | |
ATGCAACAAACCTCATCAGA+TGG | + | chr5_3:63454588-63454607 | None:intergenic | 40.0% | |
! | TTTTGTGCATTGTGCGACAA+TGG | - | chr5_3:63454810-63454829 | Msa0824310:CDS | 40.0% |
GGTACAAAATGCTAATGCAC+TGG | - | chr5_3:63454977-63454996 | Msa0824310:CDS | 40.0% | |
GGTCCCACTAAATTTATGTG+GGG | + | chr5_3:63455131-63455150 | None:intergenic | 40.0% | |
GGGTCCCACTAAATTTATGT+GGG | + | chr5_3:63455132-63455151 | None:intergenic | 40.0% | |
TGGGTCCCACTAAATTTATG+TGG | + | chr5_3:63455133-63455152 | None:intergenic | 40.0% | |
CAAATTTCTTGCAGGTGTGA+TGG | - | chr5_3:63455409-63455428 | Msa0824310:CDS | 40.0% | |
GAGGTCATTTCATGCTACTA+AGG | - | chr5_3:63455441-63455460 | Msa0824310:CDS | 40.0% | |
GTCATTTCATGCTACTAAGG+CGG | - | chr5_3:63455444-63455463 | Msa0824310:CDS | 40.0% | |
GCCTGTTGCAAAATAATTGC+AGG | - | chr5_3:63455596-63455615 | Msa0824310:CDS | 40.0% | |
ACATGATGACATGAAAGCAG+AGG | + | chr5_3:63455879-63455898 | None:intergenic | 40.0% | |
TGAAATAAACCATCCAGTCC+AGG | - | chr5_3:63455954-63455973 | Msa0824310:intron | 40.0% | |
GAAATAAACCATCCAGTCCA+GGG | - | chr5_3:63455955-63455974 | Msa0824310:intron | 40.0% | |
!! | GAGTTTGTTGAATGGGAAGT+GGG | + | chr5_3:63456046-63456065 | None:intergenic | 40.0% |
CACTTCCCATTCAACAAACT+CGG | - | chr5_3:63456045-63456064 | Msa0824310:intron | 40.0% | |
ACTTCCCATTCAACAAACTC+GGG | - | chr5_3:63456046-63456065 | Msa0824310:intron | 40.0% | |
!! | TTCACCCGAGTTTGTTGAAT+GGG | + | chr5_3:63456053-63456072 | None:intergenic | 40.0% |
!! | ATTCACCCGAGTTTGTTGAA+TGG | + | chr5_3:63456054-63456073 | None:intergenic | 40.0% |
! | CGTGCATGTTTGGGATATAT+GGG | + | chr5_3:63456104-63456123 | None:intergenic | 40.0% |
! | ACGTGCATGTTTGGGATATA+TGG | + | chr5_3:63456105-63456124 | None:intergenic | 40.0% |
AAGATTCGACGTGCATGTTT+GGG | + | chr5_3:63456113-63456132 | None:intergenic | 40.0% | |
AAAGATTCGACGTGCATGTT+TGG | + | chr5_3:63456114-63456133 | None:intergenic | 40.0% | |
TTCATGTAGCAGTTAGCAGA+AGG | - | chr5_3:63456199-63456218 | Msa0824310:intron | 40.0% | |
TCATGTAGCAGTTAGCAGAA+GGG | - | chr5_3:63456200-63456219 | Msa0824310:intron | 40.0% | |
TGATTCTGCGATACCTCATT+CGG | - | chr5_3:63456276-63456295 | Msa0824310:intron | 40.0% | |
!! | AGGCATGTGTCATTTACAAC+AGG | + | chr5_3:63456350-63456369 | None:intergenic | 40.0% |
CTATTCAAAAACTGTCGGCA+AGG | + | chr5_3:63456415-63456434 | None:intergenic | 40.0% | |
AGTGCATTGTAGGAAAACGA+TGG | + | chr5_3:63456504-63456523 | None:intergenic | 40.0% | |
!! | ATTTTGAGAATCCCCCTTTC+AGG | - | chr5_3:63456676-63456695 | Msa0824310:CDS | 40.0% |
!! | CATTTTTGCTGTGTCTGTGA+AGG | - | chr5_3:63456827-63456846 | Msa0824310:CDS | 40.0% |
CAAACTGCAAATTGCAACTC+AGG | + | chr5_3:63456872-63456891 | None:intergenic | 40.0% | |
ATGATATTGCAACAAGGGCT+TGG | - | chr5_3:63457048-63457067 | Msa0824310:intron | 40.0% | |
TGATATTGCAACAAGGGCTT+GGG | - | chr5_3:63457049-63457068 | Msa0824310:intron | 40.0% | |
! | AGTTACACAGGGCATTAACA+AGG | + | chr5_3:63457154-63457173 | None:intergenic | 40.0% |
ATGAGATCAGTGATGAGCTT+GGG | - | chr5_3:63457202-63457221 | Msa0824310:intron | 40.0% | |
GAACACTATATCTAGTGTCG+GGG | + | chr5_3:63457254-63457273 | None:intergenic | 40.0% | |
CGAACACTATATCTAGTGTC+GGG | + | chr5_3:63457255-63457274 | None:intergenic | 40.0% | |
CCGAACACTATATCTAGTGT+CGG | + | chr5_3:63457256-63457275 | None:intergenic | 40.0% | |
CCGACACTAGATATAGTGTT+CGG | - | chr5_3:63457253-63457272 | Msa0824310:intron | 40.0% | |
CGACACTAGATATAGTGTTC+GGG | - | chr5_3:63457254-63457273 | Msa0824310:intron | 40.0% | |
ATGAAGCCTACAACTACAGA+GGG | - | chr5_3:63457300-63457319 | Msa0824310:intron | 40.0% | |
!! | AGTATTGATTTCCGGAACAG+TGG | + | chr5_3:63457505-63457524 | None:intergenic | 40.0% |
!! | GTTGGCTCTGTTAAATCATC+TGG | - | chr5_3:63457579-63457598 | Msa0824310:intron | 40.0% |
!! | GTTGGCTCTGTTAAATCATC+TGG | - | chr5_3:63457579-63457598 | Msa0824310:intron | 40.0% |
! | TTGCTGCCAATTTTGCTAGA+AGG | + | chr5_3:63457882-63457901 | None:intergenic | 40.0% |
! | CAGCAAAAAGTCCTTTGAAG+AGG | - | chr5_3:63457896-63457915 | Msa0824310:intron | 40.0% |
!! | AGTATTGATTTCCGGAACAG+TGG | + | chr5_3:63457505-63457524 | None:intergenic | 40.0% |
TCAACTCTCTCTGTAGTTGT+AGG | + | chr5_3:63458020-63458039 | None:intergenic | 40.0% | |
!! | GTTGGCTCTGTTAAATCATC+TGG | - | chr5_3:63457579-63457598 | Msa0824310:intron | 40.0% |
TCAACTCTCTCTGTAGATGT+AGG | + | chr5_3:63458257-63458276 | None:intergenic | 40.0% | |
GCACATAGATCTAATGTGAC+CGG | - | chr5_3:63458323-63458342 | Msa0824310:intron | 40.0% | |
!! | GGAAAACTGCCTTCTAAAAC+TGG | - | chr5_3:63458344-63458363 | Msa0824310:intron | 40.0% |
TTGTCTGGGAAAGTGATTTC+TGG | - | chr5_3:63458575-63458594 | Msa0824310:intron | 40.0% | |
!!! | GTGCTTTTTTACCTCACACT+TGG | + | chr5_3:63458672-63458691 | None:intergenic | 40.0% |
CACACAATTTCTGACCAGTT+GGG | + | chr5_3:63458694-63458713 | None:intergenic | 40.0% | |
! | CCTGATTGTCGTGCTTTATT+TGG | + | chr5_3:63458739-63458758 | None:intergenic | 40.0% |
CCAAATAAAGCACGACAATC+AGG | - | chr5_3:63458736-63458755 | Msa0824310:intron | 40.0% | |
!! | TGGATGCTGATTCAGAGAAA+GGG | - | chr5_3:63458819-63458838 | Msa0824310:CDS | 40.0% |
CACTACAATGCGGTTATCTT+TGG | - | chr5_3:63458927-63458946 | Msa0824310:intron | 40.0% | |
! | TTGCCGTTAGCTTATGTACT+TGG | - | chr5_3:63458977-63458996 | Msa0824310:intron | 40.0% |
! | TGCCGTTAGCTTATGTACTT+GGG | - | chr5_3:63458978-63458997 | Msa0824310:intron | 40.0% |
AATCCACAAAACTGCACACA+AGG | + | chr5_3:63459011-63459030 | None:intergenic | 40.0% | |
AGGATAAGGCCATTACAATG+AGG | - | chr5_3:63459100-63459119 | Msa0824310:intron | 40.0% | |
ATCCAGCTTCCTCATTGTAA+TGG | + | chr5_3:63459112-63459131 | None:intergenic | 40.0% | |
TAAACAGAAGGTAGTAGACC+AGG | - | chr5_3:63459152-63459171 | Msa0824310:intron | 40.0% | |
TCACATGTACAGTGACAAGT+TGG | - | chr5_3:63459182-63459201 | Msa0824310:intron | 40.0% | |
AAATTTGCACCCATCCATTC+AGG | - | chr5_3:63459627-63459646 | Msa0824310:CDS | 40.0% | |
! | TGGGTTGCAGACGATTTTCA+TGG | - | chr5_3:63452757-63452776 | Msa0824310:CDS | 45.0% |
! | GTTGCAGACGATTTTCATGG+AGG | - | chr5_3:63452760-63452779 | Msa0824310:CDS | 45.0% |
TCTAACTGGTATGAAACCCG+AGG | - | chr5_3:63452802-63452821 | Msa0824310:CDS | 45.0% | |
TTCGACAACAACGATACCTC+GGG | + | chr5_3:63452821-63452840 | None:intergenic | 45.0% | |
GAGCAACATGTGCAAGGATA+AGG | - | chr5_3:63452970-63452989 | Msa0824310:CDS | 45.0% | |
!! | TATCAACGAGAGTGCCTGTT+TGG | + | chr5_3:63453232-63453251 | None:intergenic | 45.0% |
ATGATTGACTGACGGAGTGA+CGG | + | chr5_3:63453269-63453288 | None:intergenic | 45.0% | |
TGGGTTTAAGCCTTCACAGA+AGG | - | chr5_3:63453449-63453468 | Msa0824310:intron | 45.0% | |
!!! | TCAGTTTTAGGGGACAAGTC+CGG | - | chr5_3:63454552-63454571 | Msa0824310:CDS | 45.0% |
TTTCATGCTACTAAGGCGGA+TGG | - | chr5_3:63455448-63455467 | Msa0824310:CDS | 45.0% | |
CAGCATCAATGCTTTGCATG+TGG | - | chr5_3:63455657-63455676 | Msa0824310:intron | 45.0% | |
TTGTTGAATGGGAAGTGGGT+TGG | + | chr5_3:63456042-63456061 | None:intergenic | 45.0% | |
!! | CGAGTTTGTTGAATGGGAAG+TGG | + | chr5_3:63456047-63456066 | None:intergenic | 45.0% |
TGGGATTCCCCTTCTCATTT+GGG | + | chr5_3:63456085-63456104 | None:intergenic | 45.0% | |
ATGGGATTCCCCTTCTCATT+TGG | + | chr5_3:63456086-63456105 | None:intergenic | 45.0% | |
CATGTAGCAGTTAGCAGAAG+GGG | - | chr5_3:63456201-63456220 | Msa0824310:intron | 45.0% | |
ATGTAGCAGTTAGCAGAAGG+GGG | - | chr5_3:63456202-63456221 | Msa0824310:intron | 45.0% | |
CAGAAGGGGGGTAGAAAATT+GGG | - | chr5_3:63456215-63456234 | Msa0824310:intron | 45.0% | |
AGAAGGGGGGTAGAAAATTG+GGG | - | chr5_3:63456216-63456235 | Msa0824310:intron | 45.0% | |
CAAGCACAATCAGGTTAACG+AGG | + | chr5_3:63456451-63456470 | None:intergenic | 45.0% | |
! | ACATCACAGGAGTGCATTGT+AGG | + | chr5_3:63456514-63456533 | None:intergenic | 45.0% |
TGGATGATAGAAACGGTCAC+AGG | + | chr5_3:63456723-63456742 | None:intergenic | 45.0% | |
ACTAATGGGGCAATGCAATG+TGG | + | chr5_3:63456743-63456762 | None:intergenic | 45.0% | |
CATGAGATCAGTGATGAGCT+TGG | - | chr5_3:63457201-63457220 | Msa0824310:intron | 45.0% | |
GATGAAGCCTACAACTACAG+AGG | - | chr5_3:63457299-63457318 | Msa0824310:intron | 45.0% | |
TGAAGCCTACAACTACAGAG+GGG | - | chr5_3:63457301-63457320 | Msa0824310:intron | 45.0% | |
TTAACCCCCTCTGTAGTTGT+AGG | + | chr5_3:63457309-63457328 | None:intergenic | 45.0% | |
! | GCAGAAGGATCTAAAGTGAC+TGG | - | chr5_3:63457375-63457394 | Msa0824310:intron | 45.0% |
ATTGGCAGCAAAAAGTCCTC+TGG | - | chr5_3:63457417-63457436 | Msa0824310:intron | 45.0% | |
AGGAGTCTCAAGCTTATCAC+TGG | + | chr5_3:63457448-63457467 | None:intergenic | 45.0% | |
! | GCAGAAGGATCTAAAGTGAC+TGG | - | chr5_3:63457375-63457394 | Msa0824310:intron | 45.0% |
! | CAGCAAAAAGTCCTCTGAAG+AGG | - | chr5_3:63457659-63457678 | Msa0824310:intron | 45.0% |
AGGAGTCTCAAGCTTATCAC+TGG | + | chr5_3:63457448-63457467 | None:intergenic | 45.0% | |
TCAACGCTCTCTGTAGTTGT+AGG | + | chr5_3:63457783-63457802 | None:intergenic | 45.0% | |
! | GCAGAAGGATCTAAAGTGAC+TGG | - | chr5_3:63457375-63457394 | Msa0824310:intron | 45.0% |
! | CTTATCACTGGCCTCTTCAA+AGG | + | chr5_3:63457910-63457929 | None:intergenic | 45.0% |
AGGAGTCTCAAGCTTATCAC+TGG | + | chr5_3:63457448-63457467 | None:intergenic | 45.0% | |
! | GCAGAAGGATCTAAAGTGAC+TGG | - | chr5_3:63457375-63457394 | Msa0824310:intron | 45.0% |
! | CAGCAAAAAGTCCTCTGAAG+AGG | - | chr5_3:63457659-63457678 | Msa0824310:intron | 45.0% |
AGGAGTCTCAAGCTTATCAC+TGG | + | chr5_3:63457448-63457467 | None:intergenic | 45.0% | |
!! | GAACAGTAGCTCTAGTGTTG+GGG | + | chr5_3:63458202-63458221 | None:intergenic | 45.0% |
!! | GGAACAGTAGCTCTAGTGTT+GGG | + | chr5_3:63458203-63458222 | None:intergenic | 45.0% |
CAACACTAGAGCTACTGTTC+CGG | - | chr5_3:63458202-63458221 | Msa0824310:intron | 45.0% | |
TTCAAGGACACCGGAATCAA+AGG | - | chr5_3:63458409-63458428 | Msa0824310:intron | 45.0% | |
TTTACCTCACACTTGGCCAT+TGG | + | chr5_3:63458665-63458684 | None:intergenic | 45.0% | |
!! | GAGGTAAAAAAGCACCCAAC+TGG | - | chr5_3:63458677-63458696 | Msa0824310:intron | 45.0% |
GCACACAATTTCTGACCAGT+TGG | + | chr5_3:63458695-63458714 | None:intergenic | 45.0% | |
AGGTCGACGATGCAGATAAT+CGG | - | chr5_3:63458756-63458775 | Msa0824310:intron | 45.0% | |
TCTAACAGGCATGATCGACA+GGG | + | chr5_3:63458783-63458802 | None:intergenic | 45.0% | |
TTCTAACAGGCATGATCGAC+AGG | + | chr5_3:63458784-63458803 | None:intergenic | 45.0% | |
GGAGGCAATACACTTCTAAC+AGG | + | chr5_3:63458797-63458816 | None:intergenic | 45.0% | |
! | TAGAAGTGTATTGCCTCCAC+TGG | - | chr5_3:63458799-63458818 | Msa0824310:CDS | 45.0% |
TTCTCTGAATCAGCATCCAG+TGG | + | chr5_3:63458818-63458837 | None:intergenic | 45.0% | |
!! | CTGGATGCTGATTCAGAGAA+AGG | - | chr5_3:63458818-63458837 | Msa0824310:CDS | 45.0% |
! | GTTCCTTGTGTGCAGTTTTG+TGG | - | chr5_3:63459005-63459024 | Msa0824310:intron | 45.0% |
CACACCCTCCAACAATATTG+AGG | + | chr5_3:63459052-63459071 | None:intergenic | 45.0% | |
GTTGGGAGATGTTGAGGATA+AGG | - | chr5_3:63459086-63459105 | Msa0824310:intron | 45.0% | |
TCACATGTACGGTGACAAGT+TGG | - | chr5_3:63459287-63459306 | Msa0824310:intron | 45.0% | |
AAAACGAGCTGGATGCTTGT+TGG | + | chr5_3:63459565-63459584 | None:intergenic | 45.0% | |
!! | TGAAATATTAAAAAAAAATT+AGG | + | chr5_3:63455371-63455390 | None:intergenic | 5.0% |
GGATCAAGCTTCAGAAACCG+AGG | - | chr5_3:63452852-63452871 | Msa0824310:CDS | 50.0% | |
! | GTATTTGGGGCCGTTTGGAT+TGG | - | chr5_3:63453042-63453061 | Msa0824310:CDS | 50.0% |
!! | ACGAGAGTGCCTGTTTGGAT+TGG | + | chr5_3:63453227-63453246 | None:intergenic | 50.0% |
CCTTAAGTGGTGTTCGTGTG+CGG | - | chr5_3:63453713-63453732 | Msa0824310:CDS | 50.0% | |
!!! | CAGTTTTAGGGGACAAGTCC+GGG | - | chr5_3:63454553-63454572 | Msa0824310:CDS | 50.0% |
TGTGCATTGTGCGACAATGG+TGG | - | chr5_3:63454813-63454832 | Msa0824310:CDS | 50.0% | |
ATGCTACTAAGGCGGATGGT+AGG | - | chr5_3:63455452-63455471 | Msa0824310:CDS | 50.0% | |
TGCTACTAAGGCGGATGGTA+GGG | - | chr5_3:63455453-63455472 | Msa0824310:CDS | 50.0% | |
ATAAACCATCCAGTCCAGGG+AGG | - | chr5_3:63455958-63455977 | Msa0824310:intron | 50.0% | |
CTTCAATCACCTATCCTCCC+TGG | + | chr5_3:63455975-63455994 | None:intergenic | 50.0% | |
!! | GTGGGTTGGCTAGATGATGA+GGG | + | chr5_3:63456028-63456047 | None:intergenic | 50.0% |
!! | AGTGGGTTGGCTAGATGATG+AGG | + | chr5_3:63456029-63456048 | None:intergenic | 50.0% |
TTCTTTGTCCTTCTGGGCGT+TGG | - | chr5_3:63456140-63456159 | Msa0824310:intron | 50.0% | |
TGTAGCAGTTAGCAGAAGGG+GGG | - | chr5_3:63456203-63456222 | Msa0824310:intron | 50.0% | |
GCAGAAGGGGGGTAGAAAAT+TGG | - | chr5_3:63456214-63456233 | Msa0824310:intron | 50.0% | |
GAAGGGGGGTAGAAAATTGG+GGG | - | chr5_3:63456217-63456236 | Msa0824310:intron | 50.0% | |
AAGGGGGGTAGAAAATTGGG+GGG | - | chr5_3:63456218-63456237 | Msa0824310:intron | 50.0% | |
GAGGATACGAGTTGCCATGT+AGG | - | chr5_3:63456246-63456265 | Msa0824310:intron | 50.0% | |
TTGCTGTGTCTGTGAAGGCT+TGG | - | chr5_3:63456832-63456851 | Msa0824310:CDS | 50.0% | |
ATTGCAACAAGGGCTTGGGA+AGG | - | chr5_3:63457053-63457072 | Msa0824310:intron | 50.0% | |
GAAGCCTACAACTACAGAGG+GGG | - | chr5_3:63457302-63457321 | Msa0824310:intron | 50.0% | |
!! | TCTGACAAGAGCACTGCAGA+AGG | - | chr5_3:63457360-63457379 | Msa0824310:intron | 50.0% |
! | CTTATCACTGGTCTCTCCAG+AGG | + | chr5_3:63457436-63457455 | None:intergenic | 50.0% |
!! | TCTGGCAAGAGCATTGCAGA+AGG | - | chr5_3:63457597-63457616 | Msa0824310:intron | 50.0% |
! | CTTATCACTGGCCTCTTCAG+AGG | + | chr5_3:63457673-63457692 | None:intergenic | 50.0% |
GAACAGTGTCTCTAGTGTCG+GGG | + | chr5_3:63457728-63457747 | None:intergenic | 50.0% | |
GGAACAGTGTCTCTAGTGTC+GGG | + | chr5_3:63457729-63457748 | None:intergenic | 50.0% | |
CGGAACAGTGTCTCTAGTGT+CGG | + | chr5_3:63457730-63457749 | None:intergenic | 50.0% | |
CGACACTAGAGACACTGTTC+CGG | - | chr5_3:63457728-63457747 | Msa0824310:intron | 50.0% | |
!! | TCTGGCAAGAGCATTGCAGA+AGG | - | chr5_3:63457597-63457616 | Msa0824310:intron | 50.0% |
! | CTTATCACTGGCCTCTTCAG+AGG | + | chr5_3:63457673-63457692 | None:intergenic | 50.0% |
!! | CGGAACAGTAGCTCTAGTGT+TGG | + | chr5_3:63458204-63458223 | None:intergenic | 50.0% |
TCTGAATCAGCATCCAGTGG+AGG | + | chr5_3:63458815-63458834 | None:intergenic | 50.0% | |
! | GCACAAGTTGGGAGATGTTG+AGG | - | chr5_3:63459080-63459099 | Msa0824310:intron | 50.0% |
GGCCATTACAATGAGGAAGC+TGG | - | chr5_3:63459107-63459126 | Msa0824310:intron | 50.0% | |
AAGGTAGTAGACCAGGAGCA+TGG | - | chr5_3:63459159-63459178 | Msa0824310:intron | 50.0% | |
TGTACATGTGACCATGCTCC+TGG | + | chr5_3:63459173-63459192 | None:intergenic | 50.0% | |
AAAGTCATAGCCCAGGAGCA+TGG | - | chr5_3:63459264-63459283 | Msa0824310:intron | 50.0% | |
GTACATGTGACCATGCTCCT+GGG | + | chr5_3:63459172-63459191 | None:intergenic | 50.0% | |
! | CAGGAGCATGGTCACATGTA+CGG | - | chr5_3:63459171-63459190 | Msa0824310:intron | 50.0% |
! | ACATGATGGTAACGCTGACC+AGG | - | chr5_3:63459419-63459438 | Msa0824310:CDS | 50.0% |
CCTGTTTGTCTTGAGTCTCC+TGG | + | chr5_3:63459440-63459459 | None:intergenic | 50.0% | |
CCAGGAGACTCAAGACAAAC+AGG | - | chr5_3:63459437-63459456 | Msa0824310:CDS | 50.0% | |
TTTGCACCCATCCATTCAGG+TGG | - | chr5_3:63459630-63459649 | Msa0824310:CDS | 50.0% | |
AGCCAACCACCTGAATGGAT+GGG | + | chr5_3:63459639-63459658 | None:intergenic | 50.0% | |
CCGCACACGAACACCACTTA+AGG | + | chr5_3:63453716-63453735 | None:intergenic | 55.0% | |
! | GGTGTGATGGAGCATGCATG+AGG | - | chr5_3:63455422-63455441 | Msa0824310:CDS | 55.0% |
ATGCTTTGCATGTGGCGAGC+TGG | - | chr5_3:63455665-63455684 | Msa0824310:intron | 55.0% | |
TGCTTTGCATGTGGCGAGCT+GGG | - | chr5_3:63455666-63455685 | Msa0824310:intron | 55.0% | |
ATCACCTATCCTCCCTGGAC+TGG | + | chr5_3:63455970-63455989 | None:intergenic | 55.0% | |
GGGGTAGAAAATTGGGGGGA+GGG | - | chr5_3:63456222-63456241 | Msa0824310:intron | 55.0% | |
AGAAAATTGGGGGGAGGGAG+AGG | - | chr5_3:63456227-63456246 | Msa0824310:intron | 55.0% | |
!! | GAACAGTGGCTCTAGTGTCG+GGG | + | chr5_3:63457491-63457510 | None:intergenic | 55.0% |
!! | GGAACAGTGGCTCTAGTGTC+GGG | + | chr5_3:63457492-63457511 | None:intergenic | 55.0% |
!! | CGGAACAGTGGCTCTAGTGT+CGG | + | chr5_3:63457493-63457512 | None:intergenic | 55.0% |
CGACACTAGAGCCACTGTTC+CGG | - | chr5_3:63457491-63457510 | Msa0824310:CDS | 55.0% | |
!! | GAACAGTGGCTCTAGTGTCG+GGG | + | chr5_3:63457491-63457510 | None:intergenic | 55.0% |
!! | GGAACAGTGGCTCTAGTGTC+GGG | + | chr5_3:63457492-63457511 | None:intergenic | 55.0% |
!! | CGGAACAGTGGCTCTAGTGT+CGG | + | chr5_3:63457493-63457512 | None:intergenic | 55.0% |
CGACACTAGAGCCACTGTTC+CGG | - | chr5_3:63457491-63457510 | Msa0824310:CDS | 55.0% | |
!! | TCTGGCAAGAGCACTGCAGA+AGG | - | chr5_3:63458071-63458090 | Msa0824310:intron | 55.0% |
CAAGCCAATGGCCAAGTGTG+AGG | - | chr5_3:63458658-63458677 | Msa0824310:intron | 55.0% | |
CGTACATGTGACCATGCTCC+TGG | + | chr5_3:63459278-63459297 | None:intergenic | 55.0% | |
CGAGTAGCTGCAAAACGAGC+TGG | + | chr5_3:63459576-63459595 | None:intergenic | 55.0% | |
CACCCATCCATTCAGGTGGT+TGG | - | chr5_3:63459634-63459653 | Msa0824310:CDS | 55.0% | |
GAGCCAACCACCTGAATGGA+TGG | + | chr5_3:63459640-63459659 | None:intergenic | 55.0% | |
CTTCGAGCCAACCACCTGAA+TGG | + | chr5_3:63459644-63459663 | None:intergenic | 55.0% | |
! | CCTATCCTCCCTGGACTGGA+TGG | + | chr5_3:63455966-63455985 | None:intergenic | 60.0% |
CCATCCAGTCCAGGGAGGAT+AGG | - | chr5_3:63455963-63455982 | Msa0824310:intron | 60.0% | |
!! | GTCCTTCTGGGCGTTGGTTG+AGG | - | chr5_3:63456146-63456165 | Msa0824310:intron | 60.0% |
AGCCTCAACCAACGCCCAGA+AGG | + | chr5_3:63456151-63456170 | None:intergenic | 60.0% | |
GGGGGTAGAAAATTGGGGGG+AGG | - | chr5_3:63456221-63456240 | Msa0824310:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 63452548 | 63459782 | 63452548 | ID=Msa0824310;Name=Msa0824310 |
chr5_3 | mRNA | 63452548 | 63459782 | 63452548 | ID=Msa0824310-mRNA-1;Parent=Msa0824310;Name=Msa0824310-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.88|0.8|1|0.88|0.8|10|114|1168 |
chr5_3 | exon | 63452548 | 63453310 | 63452548 | ID=Msa0824310-mRNA-1:exon:19799;Parent=Msa0824310-mRNA-1 |
chr5_3 | exon | 63453490 | 63455133 | 63453490 | ID=Msa0824310-mRNA-1:exon:19798;Parent=Msa0824310-mRNA-1 |
chr5_3 | exon | 63455219 | 63455305 | 63455219 | ID=Msa0824310-mRNA-1:exon:19797;Parent=Msa0824310-mRNA-1 |
chr5_3 | exon | 63455397 | 63455632 | 63455397 | ID=Msa0824310-mRNA-1:exon:19796;Parent=Msa0824310-mRNA-1 |
chr5_3 | exon | 63456614 | 63456712 | 63456614 | ID=Msa0824310-mRNA-1:exon:19795;Parent=Msa0824310-mRNA-1 |
chr5_3 | exon | 63456811 | 63456907 | 63456811 | ID=Msa0824310-mRNA-1:exon:19794;Parent=Msa0824310-mRNA-1 |
chr5_3 | exon | 63457483 | 63457595 | 63457483 | ID=Msa0824310-mRNA-1:exon:19793;Parent=Msa0824310-mRNA-1 |
chr5_3 | exon | 63457734 | 63457787 | 63457734 | ID=Msa0824310-mRNA-1:exon:19792;Parent=Msa0824310-mRNA-1 |
chr5_3 | exon | 63458791 | 63458887 | 63458791 | ID=Msa0824310-mRNA-1:exon:19791;Parent=Msa0824310-mRNA-1 |
chr5_3 | exon | 63459352 | 63459782 | 63459352 | ID=Msa0824310-mRNA-1:exon:19790;Parent=Msa0824310-mRNA-1 |
chr5_3 | CDS | 63459352 | 63459782 | 63459352 | ID=Msa0824310-mRNA-1:cds;Parent=Msa0824310-mRNA-1 |
chr5_3 | CDS | 63458791 | 63458887 | 63458791 | ID=Msa0824310-mRNA-1:cds;Parent=Msa0824310-mRNA-1 |
chr5_3 | CDS | 63457734 | 63457787 | 63457734 | ID=Msa0824310-mRNA-1:cds;Parent=Msa0824310-mRNA-1 |
chr5_3 | CDS | 63457483 | 63457595 | 63457483 | ID=Msa0824310-mRNA-1:cds;Parent=Msa0824310-mRNA-1 |
chr5_3 | CDS | 63456811 | 63456907 | 63456811 | ID=Msa0824310-mRNA-1:cds;Parent=Msa0824310-mRNA-1 |
chr5_3 | CDS | 63456614 | 63456712 | 63456614 | ID=Msa0824310-mRNA-1:cds;Parent=Msa0824310-mRNA-1 |
chr5_3 | CDS | 63455397 | 63455632 | 63455397 | ID=Msa0824310-mRNA-1:cds;Parent=Msa0824310-mRNA-1 |
chr5_3 | CDS | 63455219 | 63455305 | 63455219 | ID=Msa0824310-mRNA-1:cds;Parent=Msa0824310-mRNA-1 |
chr5_3 | CDS | 63453490 | 63455133 | 63453490 | ID=Msa0824310-mRNA-1:cds;Parent=Msa0824310-mRNA-1 |
chr5_3 | CDS | 63452662 | 63453310 | 63452662 | ID=Msa0824310-mRNA-1:cds;Parent=Msa0824310-mRNA-1 |
chr5_3 | three_prime_UTR | 63452548 | 63452661 | 63452548 | ID=Msa0824310-mRNA-1:three_prime_utr;Parent=Msa0824310-mRNA-1 |
Gene Sequence |
Protein sequence |