AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0815180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0815180 MtrunA17_Chr5g0433371 82.759 928 152 3 1 927 1 921 0.0 1573
Msa0815180 MtrunA17_Chr5g0433321 77.346 927 180 5 1 927 1 897 0.0 1469
Msa0815180 MtrunA17_Chr3g0109541 57.573 931 374 13 6 927 4 922 0.0 1011
Msa0815180 MtrunA17_Chr5g0433471 57.048 908 372 11 17 921 22 914 0.0 965
Msa0815180 MtrunA17_Chr5g0433511 51.106 949 384 17 14 923 9 916 0.0 849
Msa0815180 MtrunA17_Chr5g0433361 49.328 967 346 19 1 913 1 877 0.0 805
Msa0815180 MtrunA17_Chr3g0109551 43.160 943 489 14 17 917 13 950 0.0 745
Msa0815180 MtrunA17_Chr5g0433421 55.286 577 217 10 360 926 459 1004 0.0 580
Msa0815180 MtrunA17_Chr5g0433421 45.882 510 247 9 1 503 1 488 1.14e-121 394
Msa0815180 MtrunA17_Chr3g0094211 35.249 922 507 20 17 911 18 876 2.28e-168 517
Msa0815180 MtrunA17_Chr8g0375181 35.345 928 513 20 16 910 82 955 1.58e-157 513
Msa0815180 MtrunA17_Chr8g0375151 35.523 898 488 17 46 910 8 847 2.88e-149 489
Msa0815180 MtrunA17_Chr8g0375191 34.861 938 476 24 16 906 25 874 9.66e-149 488
Msa0815180 MtrunA17_Chr5g0433351 44.403 536 225 7 1 530 1 469 9.82e-132 404
Msa0815180 MtrunA17_Chr5g0433341 67.742 186 59 1 581 765 5 190 7.79e-83 265
Msa0815180 MtrunA17_Chr5g0433331 72.671 161 43 1 767 926 2 162 7.85e-71 231
Msa0815180 MtrunA17_Chr8g0375871 27.917 720 416 20 1 686 9 659 1.12e-64 238
Msa0815180 MtrunA17_Chr8g0375861 27.917 720 416 20 1 686 9 659 1.26e-64 238
Msa0815180 MtrunA17_Chr8g0343741 37.736 318 180 6 582 885 954 1267 1.08e-50 194
Msa0815180 MtrunA17_Chr5g0422511 37.908 306 184 6 581 884 450 751 7.03e-46 177
Msa0815180 MtrunA17_Chr2g0334291 41.754 285 138 8 613 878 1791 2066 2.15e-44 175
Msa0815180 MtrunA17_Chr1g0173701 38.148 270 162 5 619 886 108 374 2.29e-44 166
Msa0815180 MtrunA17_Chr3g0117771 45.213 188 91 4 35 221 121 297 1.69e-38 145
Msa0815180 MtrunA17_Chr5g0400101 35.932 295 169 7 594 881 625 906 1.76e-37 152
Msa0815180 MtrunA17_Chr7g0257921 36.491 285 159 11 596 872 357 627 5.13e-30 127
Msa0815180 MtrunA17_Chr5g0394941 34.268 321 175 12 556 857 490 793 1.10e-28 124
Msa0815180 MtrunA17_Chr2g0304151 34.268 321 175 12 556 857 490 793 1.11e-28 124
Msa0815180 MtrunA17_Chr5g0435821 53.271 107 45 1 800 906 11 112 1.12e-27 119
Msa0815180 MtrunA17_Chr4g0030281 51.515 99 44 3 38 135 329 424 4.65e-18 89.4
Msa0815180 MtrunA17_Chr1g0165031 31.641 256 150 11 613 854 1130 1374 5.39e-16 83.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0815180 AT1G65810.1 43.722 908 416 14 14 905 19 847 0.0 699
Msa0815180 AT1G65810.2 44.098 898 407 14 14 895 19 837 0.0 699
Msa0815180 AT1G65810.3 44.098 898 407 14 14 895 19 837 0.0 699
Msa0815180 AT1G65780.1 42.099 905 469 14 12 907 6 864 0.0 671
Msa0815180 AT5G37150.1 40.785 917 438 19 15 918 7 831 0.0 623
Msa0815180 AT5G37140.1 43.649 740 343 12 186 918 12 684 0.0 558
Msa0815180 AT4G05540.1 43.597 734 338 15 147 867 19 689 0.0 549
Msa0815180 AT5G52090.1 43.472 720 332 13 191 900 1 655 0.0 543
Msa0815180 AT5G37165.1 48.741 437 195 6 492 918 1 418 7.58e-128 392
Msa0815180 AT5G37030.1 60.976 287 109 2 610 894 348 633 2.03e-112 359
Msa0815180 AT5G37030.1 38.601 386 186 11 15 397 7 344 3.81e-61 220
Msa0815180 AT5G37160.1 33.958 427 227 10 15 405 16 423 1.12e-65 228
Msa0815180 AT2G19120.1 38.924 316 175 6 584 885 736 1047 1.08e-50 194
Msa0815180 AT4G15570.2 37.874 301 180 6 581 878 365 661 1.13e-49 188
Msa0815180 AT4G15570.4 37.874 301 180 6 581 878 365 661 1.13e-49 188
Msa0815180 AT4G15570.3 37.874 301 180 6 581 878 454 750 2.47e-49 188
Msa0815180 AT4G15570.1 37.874 301 180 6 581 878 454 750 2.47e-49 188
Msa0815180 AT4G30100.2 37.261 314 179 6 582 881 897 1206 1.12e-47 185
Msa0815180 AT4G30100.1 37.261 314 179 6 582 881 897 1206 1.12e-47 185
Msa0815180 AT1G16800.2 39.427 279 149 7 613 878 1719 1990 2.49e-42 169
Msa0815180 AT1G16800.3 39.427 279 149 7 613 878 1649 1920 3.03e-42 169
Msa0815180 AT1G16800.1 39.427 279 149 7 613 878 1607 1878 3.63e-42 168
Msa0815180 AT5G47010.1 34.768 302 179 7 587 881 628 918 5.92e-37 151
Msa0815180 AT2G03270.1 35.088 285 134 11 612 872 365 622 1.52e-27 119
Msa0815180 AT5G35970.1 33.882 304 167 8 586 869 638 927 1.80e-26 117
Msa0815180 AT1G05460.2 33.663 303 170 10 592 871 519 813 2.91e-26 116
Msa0815180 AT1G05460.1 31.935 310 183 9 592 882 519 819 8.76e-26 115
Msa0815180 AT2G38770.1 31.765 255 151 10 613 854 1120 1364 6.95e-18 90.1
Msa0815180 AT1G08840.3 28.947 266 155 9 614 861 1053 1302 4.19e-15 80.9
Msa0815180 AT1G08840.4 28.947 266 155 9 614 861 1050 1299 4.41e-15 80.9
Msa0815180 AT1G08840.2 28.947 266 155 9 614 861 1037 1286 4.67e-15 80.5
Msa0815180 AT1G08840.1 28.947 266 155 9 614 861 1018 1267 4.97e-15 80.5

Find 174 sgRNAs with CRISPR-Local

Find 568 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTACTGTTAGATCAAATT+TGG 0.093624 5_3:-48187170 Msa0815180:CDS
TGACCACAAATGTTCGTATT+TGG 0.144420 5_3:-48191215 Msa0815180:CDS
TGTCATATAGGTTATATTTA+TGG 0.169008 5_3:-48191360 Msa0815180:CDS
CTTGGTGACATAGTTCTATT+TGG 0.183728 5_3:-48189663 Msa0815180:CDS
TTTATTTGTGTAGCAGAATT+TGG 0.189465 5_3:-48187358 Msa0815180:intron
CCTCAATTTACAACAAAATA+TGG 0.207106 5_3:-48188958 Msa0815180:CDS
CTCTTTCATTAACATATCTA+AGG 0.215038 5_3:-48187826 Msa0815180:CDS
GATTACTGGAAGACTTAAAA+AGG 0.234576 5_3:-48187739 Msa0815180:CDS
TTTGTTGACAAGAATGTCTT+TGG 0.241004 5_3:+48191666 None:intergenic
CTTGAATGTATTCAAGGATT+TGG 0.250292 5_3:-48186488 Msa0815180:three_prime_UTR
GTTAATGTTCGTTCTGTTGA+TGG 0.251906 5_3:-48187226 Msa0815180:CDS
GGATTGCTCAGTTGGATATT+AGG 0.252569 5_3:-48186325 Msa0815180:three_prime_UTR
CGCGATTTGTGAAAACATAT+TGG 0.253026 5_3:-48186522 Msa0815180:three_prime_UTR
TTTACTTGGAAACATGCTTA+TGG 0.255174 5_3:+48187941 None:intergenic
TCTTGTCCTCATCAGCATTA+TGG 0.256425 5_3:+48186906 None:intergenic
TTACATGAAGTCATTCTTTC+CGG 0.264296 5_3:-48191640 Msa0815180:CDS
ATGAAAATATTTAGAGTTCT+TGG 0.266316 5_3:-48189147 Msa0815180:CDS
GTGATTCTTACCCTTGAATA+AGG 0.266472 5_3:+48191132 None:intergenic
AAAGATTTAGACATTATATT+TGG 0.269354 5_3:+48186359 None:intergenic
AACATTAGCTCTTTGTCTAT+TGG 0.291056 5_3:+48187126 None:intergenic
ATGAAAATTGATTCTTATAA+AGG 0.293820 5_3:-48189627 Msa0815180:CDS
AAGCTTCTCTTTGCGAAATC+AGG 0.300161 5_3:-48191563 Msa0815180:CDS
TACATATCATATTGCTCTTC+GGG 0.315147 5_3:+48189495 None:intergenic
TGCTGATGAGGACAAGAAAT+TGG 0.317285 5_3:-48186900 Msa0815180:CDS
GGACCCCATATGAGTTTAAT+AGG 0.323872 5_3:+48189849 None:intergenic
TAAATTGAGACTGGAGCTTT+TGG 0.327496 5_3:+48197396 None:intergenic
ATAGCTGACAGGGCTGAATA+TGG 0.338362 5_3:-48188041 Msa0815180:CDS
ATGATCCTATTAAACTCATA+TGG 0.348044 5_3:-48189854 Msa0815180:CDS
GCCAACACTGCAGTATTTGT+TGG 0.356576 5_3:+48189744 None:intergenic
CGTTCTGTTGATGGCTTTCA+AGG 0.356770 5_3:-48187217 Msa0815180:CDS
AGATATTGTCTTTGGATTGT+AGG 0.365423 5_3:-48187004 Msa0815180:CDS
TCCTTCCATCTCTGAGTTCA+AGG 0.368448 5_3:+48191188 None:intergenic
GTGTTCTGATTCTTAACTTC+AGG 0.370620 5_3:+48189778 None:intergenic
ATTGATTCTTATAAAGGTCT+TGG 0.370658 5_3:-48189621 Msa0815180:CDS
GACAGGGTGGAAAAGTAGTT+TGG 0.370701 5_3:-48189544 Msa0815180:CDS
CCATCATAGAATTCTTTACT+TGG 0.371178 5_3:+48187927 None:intergenic
TGTACTGCTTCACTTTCTCT+TGG 0.374331 5_3:+48187272 None:intergenic
ATTTGATAGAACAGGTCATT+TGG 0.375203 5_3:+48191510 None:intergenic
ATGGAAAGCTTGTTGGCGTT+TGG 0.377848 5_3:+48189089 None:intergenic
TCACTTGAACATGGTTCATA+TGG 0.382409 5_3:-48189687 Msa0815180:CDS
AAGGATTTGGACACTATGTT+TGG 0.383876 5_3:-48186475 Msa0815180:three_prime_UTR
ATAATTCTTGAATGTATTCA+AGG 0.384580 5_3:-48186494 Msa0815180:three_prime_UTR
GTTAAGTGTTGGGATGAGTA+TGG 0.385233 5_3:-48189277 Msa0815180:CDS
ATACATATCATATTGCTCTT+CGG 0.388050 5_3:+48189494 None:intergenic
GCTGCTATCTCTGAGATTAC+TGG 0.389658 5_3:-48187753 Msa0815180:CDS
TCAAATTTGGGTGGAAAAGT+TGG 0.393517 5_3:-48187157 Msa0815180:CDS
AAGCTATAACAAGCATTTCC+TGG 0.395649 5_3:-48187871 Msa0815180:CDS
GAGTTTGTGAAGAAGAAATA+TGG 0.399921 5_3:-48189342 Msa0815180:CDS
TCTTCTAAATTGTACACAAA+TGG 0.400229 5_3:-48188880 Msa0815180:CDS
TGAAAATATTTAGAGTTCTT+GGG 0.401846 5_3:-48189146 Msa0815180:CDS
TAATAGATATTGTATTCTCT+TGG 0.402917 5_3:-48192446 Msa0815180:CDS
TTCCTGGGAGGAAAGATGTT+TGG 0.404531 5_3:-48187855 Msa0815180:CDS
GCAATAAGATCACCGACTTC+AGG 0.407697 5_3:+48191438 None:intergenic
TTTCTTGAGTTTGTAAAGAA+AGG 0.413026 5_3:-48186632 Msa0815180:three_prime_UTR
ATTTGGAGGGTGGAAGTAGT+TGG 0.414669 5_3:+48191527 None:intergenic
TCTACTGTTAGATCAAATTT+GGG 0.419635 5_3:-48187169 Msa0815180:CDS
ACCATTGAGGAATGTCTTCA+TGG 0.423064 5_3:-48192477 Msa0815180:CDS
AAGAATGTCTTTGGAATCTT+CGG 0.424721 5_3:+48191675 None:intergenic
TTTGAAAGATTAGTACTGTT+GGG 0.425936 5_3:-48188008 Msa0815180:CDS
TATAGTCTTGTCAAAGTACT+TGG 0.427870 5_3:-48191307 Msa0815180:CDS
TGATCCTATTAAACTCATAT+GGG 0.428444 5_3:-48189853 Msa0815180:CDS
CTACACAAGGATTGCTCAGT+TGG 0.434080 5_3:-48186333 Msa0815180:three_prime_UTR
ATATGGGGTCCACCAGGAAC+TGG 0.434231 5_3:-48189837 Msa0815180:CDS
CCATTGTCCTGTGGCATTGG+AGG 0.435882 5_3:-48189364 Msa0815180:CDS
TTAATTTAGAATTCATCAAA+AGG 0.438506 5_3:-48192536 Msa0815180:five_prime_UTR
TCATGAACTTGTGCCTTGTA+TGG 0.439485 5_3:+48187298 None:intergenic
CATTTAATAAACTAAGCATA+AGG 0.440913 5_3:-48186820 Msa0815180:CDS
TGTATTCTCTTGGACTATAG+AGG 0.446274 5_3:-48192436 Msa0815180:CDS
GTACCATTGTCCTGTGGCAT+TGG 0.446545 5_3:-48189367 Msa0815180:CDS
AGTGAAGCAGTACATGGTTT+CGG 0.446804 5_3:-48187263 Msa0815180:CDS
CGAACATTAACTGAAAAGTT+AGG 0.447013 5_3:+48187238 None:intergenic
TATGTTTGTCACTGGAGAAT+AGG 0.447357 5_3:+48189953 None:intergenic
AACATGTTTCCTTTCAATTG+AGG 0.448102 5_3:-48189175 Msa0815180:CDS
TTAATGTCGAACCCATGCTT+TGG 0.449121 5_3:+48186139 None:intergenic
CTTGTCACGATTTGGTGAAA+AGG 0.449899 5_3:-48186181 Msa0815180:three_prime_UTR
GCTTATTTCTCTTACAATGT+TGG 0.451615 5_3:+48187890 None:intergenic
ATTCTTTCCGGCATTGATAG+AGG 0.451644 5_3:-48191628 Msa0815180:CDS
TTGGCGTTTGGTTTGACTCA+TGG 0.453321 5_3:+48189101 None:intergenic
CACAGAGTTACTATTAACTA+AGG 0.454935 5_3:+48186970 None:intergenic
AAGTGTTGCAGCCTTATTCA+AGG 0.460824 5_3:-48191143 Msa0815180:CDS
CTCAAACGTTGTATCTTGAT+TGG 0.462763 5_3:-48188772 Msa0815180:CDS
TTTGGAGGGTGGAAGTAGTT+GGG 0.464631 5_3:+48191528 None:intergenic
AAGTACTTTGACAAGACTAT+AGG 0.467208 5_3:+48191309 None:intergenic
TCACTGTAATTTGATAGAAC+AGG 0.468402 5_3:+48191502 None:intergenic
AAAGGTTGTTCTTGATGCTA+TGG 0.472159 5_3:-48186942 Msa0815180:CDS
AATCATCATGGAAAGCTTGT+TGG 0.476080 5_3:+48189082 None:intergenic
TTTCCAAATACGAACATTTG+TGG 0.483247 5_3:+48191212 None:intergenic
CCAAGTAAAGAATTCTATGA+TGG 0.483255 5_3:-48187927 Msa0815180:CDS
AACAAATACTGCAGTGTTGG+CGG 0.486006 5_3:-48189742 Msa0815180:CDS
ATTTGAAAGATTAGTACTGT+TGG 0.486058 5_3:-48188009 Msa0815180:CDS
GGTGAAAAGGTGACACGATC+TGG 0.488778 5_3:-48186168 Msa0815180:three_prime_UTR
GAAATTGGATCAAGCTATTG+AGG 0.490847 5_3:-48186885 Msa0815180:CDS
AAGATACAACGTTTGAGGCC+AGG 0.501291 5_3:+48188778 None:intergenic
AAAGTGTGTATGACTTGAGC+AGG 0.502599 5_3:-48191395 Msa0815180:CDS
GAACATGGTTCATATGGTCT+TGG 0.509265 5_3:-48189681 Msa0815180:CDS
TTCATCAAAAGGGCTAACTA+AGG 0.512069 5_3:-48192525 Msa0815180:five_prime_UTR
TCATCACCACCTCAATTGAA+AGG 0.512446 5_3:+48189166 None:intergenic
GACGATCTCCGAGGCAGTGA+TGG 0.512642 5_3:+48197366 None:intergenic
GAGGAATAACTACCCGTGTA+TGG 0.514276 5_3:-48186558 Msa0815180:three_prime_UTR
TAATTTAGAATTCATCAAAA+GGG 0.517776 5_3:-48192535 Msa0815180:five_prime_UTR
CAGAAACATCTACTTTCTCT+AGG 0.519693 5_3:-48186790 Msa0815180:CDS
TGCTTATCAGAAGAAAATCT+CGG 0.520365 5_3:-48189981 Msa0815180:CDS
CTTGGAAACATGCTTATGGA+TGG 0.522324 5_3:+48187945 None:intergenic
ATATTACTGATGAGGTGTAC+GGG 0.525263 5_3:-48191476 Msa0815180:CDS
ATTTAATAAACTAAGCATAA+GGG 0.527540 5_3:-48186819 Msa0815180:CDS
CAATCAAGATACAACGTTTG+AGG 0.531012 5_3:+48188773 None:intergenic
TGTGTTTCCTCTATCAATGC+CGG 0.532520 5_3:+48191621 None:intergenic
TAGTAACTCTGTGTGGAGAA+AGG 0.532620 5_3:-48186960 Msa0815180:CDS
TTCATGATAAATTTGACTTG+AGG 0.533734 5_3:-48191281 Msa0815180:CDS
AGCTATAACAAGCATTTCCT+GGG 0.534203 5_3:-48187870 Msa0815180:CDS
AATATTACTGATGAGGTGTA+CGG 0.538320 5_3:-48191477 Msa0815180:CDS
GATTTGACTATGTTTGTCAC+TGG 0.539058 5_3:+48189945 None:intergenic
ACAAGGAATAAAGTCAGCAT+AGG 0.539198 5_3:-48187331 Msa0815180:CDS
ATCTGGTGAAGGCCAAAGCA+TGG 0.539737 5_3:-48186151 Msa0815180:three_prime_UTR
AACCAAACATCTTTCCTCCC+AGG 0.540336 5_3:+48187853 None:intergenic
GGCTAACTAAGGAACAAAGA+TGG 0.540804 5_3:-48192514 Msa0815180:exon
TGATAGAACAGGTCATTTGG+AGG 0.545988 5_3:+48191513 None:intergenic
GCTTATCAGAAGAAAATCTC+GGG 0.549497 5_3:-48189980 Msa0815180:CDS
TGGCGGAGAAGCAACAAGCT+AGG 0.549504 5_3:+48197416 None:intergenic
GGCTTGAAGTAAATTGAGAC+TGG 0.552243 5_3:+48197387 None:intergenic
TCCAACAAATACTGCAGTGT+TGG 0.554100 5_3:-48189745 Msa0815180:CDS
GAAAGCCTTGAACTCAGAGA+TGG 0.554892 5_3:-48191193 Msa0815180:CDS
GATAGAACAGGTCATTTGGA+GGG 0.556167 5_3:+48191514 None:intergenic
ACTTCAAGCCATCACTGCCT+CGG 0.557276 5_3:-48197374 Msa0815180:five_prime_UTR
ATGTTTCCTTTCAATTGAGG+TGG 0.558015 5_3:-48189172 Msa0815180:CDS
GCTATTCCATTGCAACTACC+TGG 0.560794 5_3:-48188796 Msa0815180:CDS
TTGAGGCCAGGTAGTTGCAA+TGG 0.561539 5_3:+48188790 None:intergenic
CAAGGAATAAAGTCAGCATA+GGG 0.564686 5_3:-48187330 Msa0815180:CDS
GAGCTAATGTTGCTATCACT+AGG 0.565746 5_3:-48187114 Msa0815180:CDS
TTGTTTCCATAATGCTGATG+AGG 0.571994 5_3:-48186912 Msa0815180:CDS
ATGTTGCTATCACTAGGGCT+AGG 0.572268 5_3:-48187108 Msa0815180:intron
TTCACAAATTGGAGTTCACA+AGG 0.574660 5_3:-48186258 Msa0815180:three_prime_UTR
ACGCTTTCATCACATAGCTA+AGG 0.576277 5_3:-48189712 Msa0815180:CDS
AGTGTTGCAGCCTTATTCAA+GGG 0.577634 5_3:-48191142 Msa0815180:intron
AAATACTGCAGTGTTGGCGG+TGG 0.578550 5_3:-48189739 Msa0815180:CDS
TCTTTCATTAACATATCTAA+GGG 0.586864 5_3:-48187825 Msa0815180:CDS
AGAGAAAGTGAAGCAGTACA+TGG 0.587610 5_3:-48187269 Msa0815180:CDS
TCTGGTGAAGGCCAAAGCAT+GGG 0.589058 5_3:-48186150 Msa0815180:three_prime_UTR
ACTGATGAGGTGTACGGGGT+AGG 0.591414 5_3:-48191471 Msa0815180:CDS
ACAAACTCCTCCAATGCCAC+AGG 0.591864 5_3:+48189357 None:intergenic
ACTGTTAGATCAAATTTGGG+TGG 0.595440 5_3:-48187166 Msa0815180:CDS
CTAAATCTTTATGCTACACA+AGG 0.596080 5_3:-48186346 Msa0815180:three_prime_UTR
AAACTCATATGGGGTCCACC+AGG 0.598783 5_3:-48189843 Msa0815180:CDS
AATCGACAAAATATCAGATG+AGG 0.600562 5_3:-48186577 Msa0815180:three_prime_UTR
TCCAGCAATGGTCAAAAGCA+AGG 0.601328 5_3:-48188734 Msa0815180:intron
GAAGAGATGTAATACCATTG+AGG 0.602360 5_3:-48192490 Msa0815180:CDS
GAGAGTTATAGTCATGTGAA+AGG 0.603950 5_3:-48189420 Msa0815180:CDS
TCAATTGAAAGGAAACATGT+TGG 0.607459 5_3:+48189177 None:intergenic
AAGGTGACACGATCTGGTGA+AGG 0.609692 5_3:-48186162 Msa0815180:three_prime_UTR
TCGGAGATCGTCTCCACCGT+CGG 0.610802 5_3:-48197355 Msa0815180:intron
AGGGATCATATCACCATACA+AGG 0.611535 5_3:-48187311 Msa0815180:CDS
AGTGAAGAATATTACTGATG+AGG 0.611651 5_3:-48191484 Msa0815180:CDS
ACCATGAAGACATTCCTCAA+TGG 0.613334 5_3:+48192476 None:intergenic
TTTCATACAAGAAACGGTGT+AGG 0.614711 5_3:-48189389 Msa0815180:CDS
GGAAAATATGAACCTGAAGT+CGG 0.615834 5_3:-48191450 Msa0815180:CDS
AGCTAATGTTGCTATCACTA+GGG 0.619251 5_3:-48187113 Msa0815180:CDS
TCTGTTGATGGCTTTCAAGG+TGG 0.620094 5_3:-48187214 Msa0815180:CDS
CCTCCAATGCCACAGGACAA+TGG 0.620337 5_3:+48189364 None:intergenic
TAAAATCATTGAACCATACA+CGG 0.625468 5_3:+48186545 None:intergenic
GCCTTGAACTCAGAGATGGA+AGG 0.630365 5_3:-48191189 Msa0815180:CDS
TGAGAGACAACTTCCAGCAA+TGG 0.631253 5_3:-48188746 Msa0815180:CDS
AGAACAGGTCATTTGGAGGG+TGG 0.634884 5_3:+48191517 None:intergenic
GCTAAGGATTCACTTGAACA+TGG 0.635117 5_3:-48189696 Msa0815180:CDS
TAGCAGAATTTGGAAAGACA+AGG 0.642842 5_3:-48187348 Msa0815180:CDS
TTTGTGTCAGATAGCTGACA+GGG 0.645516 5_3:-48188051 Msa0815180:intron
GATCCTATTAAACTCATATG+GGG 0.648704 5_3:-48189852 Msa0815180:CDS
TATAACAAGCATTTCCTGGG+AGG 0.655253 5_3:-48187867 Msa0815180:CDS
AAAATCATTGAACCATACAC+GGG 0.669663 5_3:+48186546 None:intergenic
TAGTTAATAGTAACTCTGTG+TGG 0.673014 5_3:-48186967 Msa0815180:CDS
CGGAAAATACATACCGACGG+TGG 0.673154 5_3:+48197342 None:intergenic
TATTACTGATGAGGTGTACG+GGG 0.686178 5_3:-48191475 Msa0815180:CDS
AGTTTAATAGGATCATTGTG+AGG 0.690593 5_3:+48189861 None:intergenic
GTGTAGGTACCATTGTCCTG+TGG 0.714198 5_3:-48189373 Msa0815180:CDS
GACGGTGGAGACGATCTCCG+AGG 0.758231 5_3:+48197357 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAAATAAAGTTGTTTTA+CGG - chr5_3:48186355-48186374 Msa0815180:three_prime_UTR 10.0%
!! AGATATAATTAACAAAAATA+TGG + chr5_3:48186829-48186848 None:intergenic 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG - chr5_3:48186960-48186979 Msa0815180:CDS 10.0%
!!! TATAAGTAAATTTTTTTTGT+AGG - chr5_3:48187020-48187039 Msa0815180:intron 10.0%
!!! ATAAGTAAATTTTTTTTGTA+GGG - chr5_3:48187021-48187040 Msa0815180:intron 10.0%
!! ATATTTAAAAGTTGAATTAT+AGG + chr5_3:48188745-48188764 None:intergenic 10.0%
!!! ATTTATGTATATATATTTTG+TGG + chr5_3:48192967-48192986 None:intergenic 10.0%
!! TGAAAAAAGTTTATATAAAA+TGG - chr5_3:48196886-48196905 Msa0815180:intron 10.0%
!!! ACAACTTTATTTTTTAAGAA+CGG + chr5_3:48186351-48186370 None:intergenic 15.0%
!! TAAATCAAAGTATAATTACT+TGG + chr5_3:48186563-48186582 None:intergenic 15.0%
!!! AGTAATTATACTTTGATTTA+AGG - chr5_3:48186563-48186582 Msa0815180:three_prime_UTR 15.0%
!!! GTAATTATACTTTGATTTAA+GGG - chr5_3:48186564-48186583 Msa0815180:three_prime_UTR 15.0%
!! AATGCTATTATAATTAAGTA+AGG + chr5_3:48186638-48186657 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG + chr5_3:48186710-48186729 None:intergenic 15.0%
!!! AATTTTTGCGATATTTTTTT+CGG + chr5_3:48186794-48186813 None:intergenic 15.0%
!! TAAACAAAATTTACTATAGA+AGG - chr5_3:48186988-48187007 Msa0815180:CDS 15.0%
!! AAACAAAATTTACTATAGAA+GGG - chr5_3:48186989-48187008 Msa0815180:CDS 15.0%
!! AAAGCTATTAAAATTAAGTA+AGG - chr5_3:48187050-48187069 Msa0815180:intron 15.0%
!! CATTAGTATTGTTTAAATTA+CGG - chr5_3:48187166-48187185 Msa0815180:CDS 15.0%
!! ATTTATCCTTAATGTATTTA+GGG + chr5_3:48188341-48188360 None:intergenic 15.0%
!!! TTTTATAATTAGAGAATAGA+TGG + chr5_3:48188514-48188533 None:intergenic 15.0%
!!! TTTTTAAAAGAGAAAAATAG+GGG + chr5_3:48188921-48188940 None:intergenic 15.0%
!!! GTTTTTAAAAGAGAAAAATA+GGG + chr5_3:48188922-48188941 None:intergenic 15.0%
!!! TGTTTTTAAAAGAGAAAAAT+AGG + chr5_3:48188923-48188942 None:intergenic 15.0%
!! AAAAGATAATAGATTGTATT+TGG + chr5_3:48189070-48189089 None:intergenic 15.0%
!!! ACTTTTCATTTTTTTTAACT+TGG + chr5_3:48189707-48189726 None:intergenic 15.0%
!!! TATAATTTAATCCATCATTT+TGG + chr5_3:48190368-48190387 None:intergenic 15.0%
!! TATTTACAAAGTTATTGAAA+TGG - chr5_3:48190388-48190407 Msa0815180:intron 15.0%
!! GTTATTTAATAAAATCTCAA+AGG - chr5_3:48190461-48190480 Msa0815180:intron 15.0%
!!! TTAATTTAGAATTCATCAAA+AGG - chr5_3:48191029-48191048 Msa0815180:intron 15.0%
!!! TAATTTAGAATTCATCAAAA+GGG - chr5_3:48191030-48191049 Msa0815180:intron 15.0%
!! TGAATTAATTCAAAGAAAAA+GGG + chr5_3:48191323-48191342 None:intergenic 15.0%
!! TTGAATTAATTCAAAGAAAA+AGG + chr5_3:48191324-48191343 None:intergenic 15.0%
!! TAGTATTCAAATTTCTTAAT+TGG - chr5_3:48191654-48191673 Msa0815180:CDS 15.0%
!! CTAAATCTAAATTTATCTAA+TGG + chr5_3:48191699-48191718 None:intergenic 15.0%
!! AATTTGATTATAAGATCTAA+AGG + chr5_3:48192493-48192512 None:intergenic 15.0%
!!! ATTTAGCATTATTTTTGTTT+TGG + chr5_3:48192898-48192917 None:intergenic 15.0%
!!! TTTTGTTCATTTTATGATAA+GGG + chr5_3:48193247-48193266 None:intergenic 15.0%
!!! ATTTTGTTCATTTTATGATA+AGG + chr5_3:48193248-48193267 None:intergenic 15.0%
!!! TTTTCATTATATTTTACAGA+TGG - chr5_3:48193544-48193563 Msa0815180:intron 15.0%
!!! ATGAAAATTGATTCTTATAA+AGG - chr5_3:48193938-48193957 Msa0815180:intron 15.0%
!! ATTAAGTAGTTTATTCATAT+AGG - chr5_3:48195272-48195291 Msa0815180:intron 15.0%
!! ATAGTAAATAAAATTTATGC+AGG + chr5_3:48195981-48196000 None:intergenic 15.0%
!!! TTACAAGTTATTTTAATTTG+CGG - chr5_3:48196044-48196063 Msa0815180:intron 15.0%
!! AAATAAAACATTACATGATT+TGG + chr5_3:48196194-48196213 None:intergenic 15.0%
!! ATTTAATAAACTAAGCATAA+GGG - chr5_3:48196746-48196765 Msa0815180:intron 15.0%
!! AATATGAATATATGAAAAAG+AGG + chr5_3:48196810-48196829 None:intergenic 15.0%
!! AAAGATTTAGACATTATATT+TGG + chr5_3:48197209-48197228 None:intergenic 15.0%
!!! TTAAGGGTTAATTATGTTTT+TGG - chr5_3:48186580-48186599 Msa0815180:three_prime_UTR 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG - chr5_3:48186740-48186759 Msa0815180:three_prime_UTR 20.0%
!!! TTTCACACAAAATATGTTTT+TGG + chr5_3:48187108-48187127 None:intergenic 20.0%
!!! TCTAATGGATAAGATTAAAA+TGG + chr5_3:48187423-48187442 None:intergenic 20.0%
!! GACATTATTATTCCAAAAAA+GGG + chr5_3:48187769-48187788 None:intergenic 20.0%
!! TTTCAATATTTCTCTAATTG+AGG - chr5_3:48187830-48187849 Msa0815180:CDS 20.0%
!! GTAACAATATCATATTAAAG+TGG - chr5_3:48187987-48188006 Msa0815180:CDS 20.0%
!! GATTTATCCTTAATGTATTT+AGG + chr5_3:48188342-48188361 None:intergenic 20.0%
!! AAGCTATAGAAATACATATT+TGG - chr5_3:48188362-48188381 Msa0815180:intron 20.0%
!! TTTATTAAATATTCACAGTG+CGG + chr5_3:48188477-48188496 None:intergenic 20.0%
!! ATGTGTCAAAAAATTAAGAA+GGG + chr5_3:48188566-48188585 None:intergenic 20.0%
!!! TCTTTAAGAGAGAAAAAATA+GGG + chr5_3:48188630-48188649 None:intergenic 20.0%
!!! ATAGGAAAATTTGTTTTGAT+TGG + chr5_3:48188727-48188746 None:intergenic 20.0%
!!! TTTTAAAAGAGAAAAATAGG+GGG + chr5_3:48188920-48188939 None:intergenic 20.0%
!!! CAAAATGATAAATTAAGTTG+AGG + chr5_3:48189182-48189201 None:intergenic 20.0%
!!! TGTATCTTTTTTTTTTGTTG+TGG - chr5_3:48189297-48189316 Msa0815180:CDS 20.0%
!!! AATTTTTGTTGGTTAGATTT+GGG + chr5_3:48189638-48189657 None:intergenic 20.0%
!! AAATGTATTATTTACTGTGT+TGG + chr5_3:48189764-48189783 None:intergenic 20.0%
!! GTTATTTAAGAAGATCTTAA+GGG + chr5_3:48189878-48189897 None:intergenic 20.0%
!!! TGTTATTTAAGAAGATCTTA+AGG + chr5_3:48189879-48189898 None:intergenic 20.0%
!! ACTTCTCTTATAATATAACA+TGG - chr5_3:48189965-48189984 Msa0815180:CDS 20.0%
!! AAAATTACCTACTTGAAAAA+TGG + chr5_3:48190078-48190097 None:intergenic 20.0%
!!! AGAAATGAGAAATTTTTTTG+TGG + chr5_3:48190210-48190229 None:intergenic 20.0%
!! TATTGAAATGGATAAAATGA+AGG - chr5_3:48190400-48190419 Msa0815180:intron 20.0%
!! ATTGAAATGGATAAAATGAA+GGG - chr5_3:48190401-48190420 Msa0815180:intron 20.0%
!!! TTTCAATAAACAATTTTCCT+CGG - chr5_3:48190649-48190668 Msa0815180:intron 20.0%
!!! ACATATATATGCAAGTATTT+TGG - chr5_3:48190858-48190877 Msa0815180:intron 20.0%
!! TAATAGATATTGTATTCTCT+TGG - chr5_3:48191119-48191138 Msa0815180:intron 20.0%
!! AAGAATTCATTATCTTGAAT+CGG + chr5_3:48191568-48191587 None:intergenic 20.0%
!! ATAAAAAACTACTGTCATAT+AGG - chr5_3:48192193-48192212 Msa0815180:intron 20.0%
!! TGTCATATAGGTTATATTTA+TGG - chr5_3:48192205-48192224 Msa0815180:intron 20.0%
!!! ACAGTTTAAATCTAATTTGT+TGG - chr5_3:48192624-48192643 Msa0815180:intron 20.0%
!! TTGATATTGCAAAAAAAACA+TGG + chr5_3:48192697-48192716 None:intergenic 20.0%
!!! AAGTGAAAGAATGAAAATTT+TGG - chr5_3:48193149-48193168 Msa0815180:intron 20.0%
!!! CATATTTTTCATACAAGAAA+CGG - chr5_3:48194170-48194189 Msa0815180:intron 20.0%
!! ATGATAAAAAGTTAAGTGTT+GGG - chr5_3:48194278-48194297 Msa0815180:intron 20.0%
!!! ATGAAAATATTTAGAGTTCT+TGG - chr5_3:48194418-48194437 Msa0815180:intron 20.0%
!!! TGAAAATATTTAGAGTTCTT+GGG - chr5_3:48194419-48194438 Msa0815180:intron 20.0%
!! CAAATGATTTATCTTAGAAA+TGG + chr5_3:48195231-48195250 None:intergenic 20.0%
!!! CCAACAAAGTATTAATTAAT+TGG + chr5_3:48195365-48195384 None:intergenic 20.0%
!! CCAATTAATTAATACTTTGT+TGG - chr5_3:48195362-48195381 Msa0815180:intron 20.0%
!! TCTTTCATTAACATATCTAA+GGG - chr5_3:48195740-48195759 Msa0815180:intron 20.0%
!! AGAATGATATAATACGATAA+AGG - chr5_3:48195905-48195924 Msa0815180:intron 20.0%
!! GAATGATATAATACGATAAA+GGG - chr5_3:48195906-48195925 Msa0815180:intron 20.0%
!! CATTTAATAAACTAAGCATA+AGG - chr5_3:48196745-48196764 Msa0815180:intron 20.0%
!! ATAATTCTTGAATGTATTCA+AGG - chr5_3:48197071-48197090 Msa0815180:intron 20.0%
!!! TATGTATTTTGTTCACAAAT+TGG - chr5_3:48197296-48197315 Msa0815180:intron 20.0%
! AGAATATGAATCAAAGACAT+CGG + chr5_3:48186246-48186265 None:intergenic 25.0%
! ACTTTATTGATGGAAAAAAG+TGG + chr5_3:48186322-48186341 None:intergenic 25.0%
!!! TTGTTTTACGGTTTCTTTTT+TGG - chr5_3:48186367-48186386 Msa0815180:three_prime_UTR 25.0%
! CATTCAAAAAAGATGACAAA+GGG + chr5_3:48186405-48186424 None:intergenic 25.0%
! ACATTCAAAAAAGATGACAA+AGG + chr5_3:48186406-48186425 None:intergenic 25.0%
!!! TGAACTTTTGAAGATTGATT+TGG - chr5_3:48186469-48186488 Msa0815180:three_prime_UTR 25.0%
! TGCAAAGTTGGAAAATAAAT+TGG - chr5_3:48186526-48186545 Msa0815180:three_prime_UTR 25.0%
! AAACAAATTTGGATTGAGTA+AGG + chr5_3:48186699-48186718 None:intergenic 25.0%
! GTGTTAAGAACGTTATTAAA+AGG - chr5_3:48186764-48186783 Msa0815180:three_prime_UTR 25.0%
! AAGTAAGGATTAAACATAGA+AGG - chr5_3:48187065-48187084 Msa0815180:intron 25.0%
!! TGTGTGAGTTCTATTTTATT+TGG + chr5_3:48187148-48187167 None:intergenic 25.0%
! AAACTATTGGATTTGAATGA+TGG + chr5_3:48187325-48187344 None:intergenic 25.0%
! AAGAAATAAATCCACAAAAG+TGG + chr5_3:48187355-48187374 None:intergenic 25.0%
! GGACATTATTATTCCAAAAA+AGG + chr5_3:48187770-48187789 None:intergenic 25.0%
!! ATTTCTCCAAAGTATCTATA+TGG + chr5_3:48187909-48187928 None:intergenic 25.0%
! TGGAGAAATTAAAGTTAGAA+TGG - chr5_3:48187920-48187939 Msa0815180:CDS 25.0%
! AGAAATTAAAGTTAGAATGG+TGG - chr5_3:48187923-48187942 Msa0815180:CDS 25.0%
! CTTCGGTAGATAATATAATT+TGG - chr5_3:48188218-48188237 Msa0815180:intron 25.0%
!! GAAATCCAAATACAACATTT+TGG - chr5_3:48188240-48188259 Msa0815180:intron 25.0%
! GATTTCCAAAATGTTGTATT+TGG + chr5_3:48188248-48188267 None:intergenic 25.0%
!!! CGTCTTAAAATTGTTGTTTT+TGG + chr5_3:48188270-48188289 None:intergenic 25.0%
! TGTGTCAAAAAATTAAGAAG+GGG + chr5_3:48188565-48188584 None:intergenic 25.0%
! GATGTGTCAAAAAATTAAGA+AGG + chr5_3:48188567-48188586 None:intergenic 25.0%
!! GTCTTTAAGAGAGAAAAAAT+AGG + chr5_3:48188631-48188650 None:intergenic 25.0%
!! AAGGTGTAAGATTGTATTTT+TGG + chr5_3:48188840-48188859 None:intergenic 25.0%
! ATGTTCTCTTTCAACTAAAT+AGG + chr5_3:48189225-48189244 None:intergenic 25.0%
!! CTCTATTTTGTGTTTGTTTA+TGG + chr5_3:48189452-48189471 None:intergenic 25.0%
!!! GAATTTTTGTTGGTTAGATT+TGG + chr5_3:48189639-48189658 None:intergenic 25.0%
! CAACAAAAATTCACTAATCA+CGG - chr5_3:48189647-48189666 Msa0815180:CDS 25.0%
! AACAAAAATTCACTAATCAC+GGG - chr5_3:48189648-48189667 Msa0815180:CDS 25.0%
! AGCTAATTGCTCAAAATAAA+TGG + chr5_3:48190008-48190027 None:intergenic 25.0%
!!! TTTCTTTCCATTTTTCAAGT+AGG - chr5_3:48190068-48190087 Msa0815180:intron 25.0%
!!! ATGAGAAATTTTTTTGTGGA+TGG + chr5_3:48190206-48190225 None:intergenic 25.0%
! ATACAAACAAACCAAAATGA+TGG - chr5_3:48190354-48190373 Msa0815180:intron 25.0%
! ATGTGTTTGGAAAATTAGAA+GGG - chr5_3:48190430-48190449 Msa0815180:intron 25.0%
! TAATAACACATTAATTACCG+AGG + chr5_3:48190669-48190688 None:intergenic 25.0%
! AGTACAAAGCTTCTATAAAA+AGG - chr5_3:48190758-48190777 Msa0815180:intron 25.0%
! GTACAAAGCTTCTATAAAAA+GGG - chr5_3:48190759-48190778 Msa0815180:intron 25.0%
!! CTTGCATATATATGTTACTT+AGG + chr5_3:48190853-48190872 None:intergenic 25.0%
! AAAAGGGAATAAAGTTGTTA+AGG + chr5_3:48191307-48191326 None:intergenic 25.0%
!!! TTCATGATAAATTTGACTTG+AGG - chr5_3:48192284-48192303 Msa0815180:intron 25.0%
! TGATTATAAGATCTAAAGGA+AGG + chr5_3:48192489-48192508 None:intergenic 25.0%
! ATTCTTGGTATTACATAGAA+TGG - chr5_3:48192535-48192554 Msa0815180:five_prime_UTR 25.0%
! ATTACCAAGGTTATCAAAAT+CGG - chr5_3:48192722-48192741 Msa0815180:intron 25.0%
! ACTAAAGAATATTTGCATCT+AGG + chr5_3:48192999-48193018 None:intergenic 25.0%
! TTTAGTAGATGAAACAATGA+TGG - chr5_3:48193013-48193032 Msa0815180:intron 25.0%
! AGTTCTATAAATACCCAAAA+GGG + chr5_3:48193175-48193194 None:intergenic 25.0%
! AAGTTCTATAAATACCCAAA+AGG + chr5_3:48193176-48193195 None:intergenic 25.0%
!!! TTTTGGGTATTTATAGAACT+TGG - chr5_3:48193175-48193194 Msa0815180:intron 25.0%
! GTTCTATGATATTATTACCA+AGG - chr5_3:48193498-48193517 Msa0815180:intron 25.0%
! ATGATCCTATTAAACTCATA+TGG - chr5_3:48193711-48193730 Msa0815180:intron 25.0%
! TGATCCTATTAAACTCATAT+GGG - chr5_3:48193712-48193731 Msa0815180:intron 25.0%
!! ATTGATTCTTATAAAGGTCT+TGG - chr5_3:48193944-48193963 Msa0815180:intron 25.0%
! ATACATATCATATTGCTCTT+CGG + chr5_3:48194074-48194093 None:intergenic 25.0%
!! CACTTAACTTTTTATCATCT+TGG + chr5_3:48194276-48194295 None:intergenic 25.0%
! GATGATAAAAAGTTAAGTGT+TGG - chr5_3:48194277-48194296 Msa0815180:intron 25.0%
!!! CCATATTTTGTTGTAAATTG+AGG + chr5_3:48194610-48194629 None:intergenic 25.0%
! CCTCAATTTACAACAAAATA+TGG - chr5_3:48194607-48194626 Msa0815180:intron 25.0%
! TCTTCTAAATTGTACACAAA+TGG - chr5_3:48194685-48194704 Msa0815180:intron 25.0%
!! TTTTTCATAAAAAGCCTGTT+CGG - chr5_3:48194926-48194945 Msa0815180:intron 25.0%
! TTTCTTTCTATAAGTTCTTC+AGG - chr5_3:48195057-48195076 Msa0815180:intron 25.0%
! ATGATTTATCTTAGAAATGG+TGG + chr5_3:48195228-48195247 None:intergenic 25.0%
!! TCCGAGTGAAATTTTTATTA+TGG - chr5_3:48195474-48195493 Msa0815180:intron 25.0%
! GCCATAATAAAAATTTCACT+CGG + chr5_3:48195478-48195497 None:intergenic 25.0%
! ATTTGAAAGATTAGTACTGT+TGG - chr5_3:48195556-48195575 Msa0815180:intron 25.0%
! TTTGAAAGATTAGTACTGTT+GGG - chr5_3:48195557-48195576 Msa0815180:intron 25.0%
! CTCTTTCATTAACATATCTA+AGG - chr5_3:48195739-48195758 Msa0815180:intron 25.0%
! ATTACTGGAAGACTTAAAAA+GGG - chr5_3:48195827-48195846 Msa0815180:intron 25.0%
!!! AAGTTATTTTAATTTGCGGA+TGG - chr5_3:48196048-48196067 Msa0815180:intron 25.0%
! TTTATTTGTGTAGCAGAATT+TGG - chr5_3:48196207-48196226 Msa0815180:intron 25.0%
! ATCTACTGTTAGATCAAATT+TGG - chr5_3:48196395-48196414 Msa0815180:intron 25.0%
! TCTACTGTTAGATCAAATTT+GGG - chr5_3:48196396-48196415 Msa0815180:intron 25.0%
! ATATATGTCAGCATTTCATA+AGG + chr5_3:48196505-48196524 None:intergenic 25.0%
!! ATTTTTGCAGATATTGTCTT+TGG - chr5_3:48196553-48196572 Msa0815180:intron 25.0%
! TTTCTTGAGTTTGTAAAGAA+AGG - chr5_3:48196933-48196952 Msa0815180:intron 25.0%
! TAAAATCATTGAACCATACA+CGG + chr5_3:48197023-48197042 None:intergenic 25.0%
ACGGATAACAACTTTATTGA+TGG + chr5_3:48186332-48186351 None:intergenic 30.0%
!! TTTGAAGATTGATTTGGTAG+TGG - chr5_3:48186475-48186494 Msa0815180:three_prime_UTR 30.0%
TGGAATTACATGATTAGTGT+TGG - chr5_3:48186495-48186514 Msa0815180:three_prime_UTR 30.0%
! TACAAGGTTGCAATTTTGTA+GGG + chr5_3:48186607-48186626 None:intergenic 30.0%
! TTACAAGGTTGCAATTTTGT+AGG + chr5_3:48186608-48186627 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr5_3:48186623-48186642 None:intergenic 30.0%
! ATAGAAGGTCGCAATTTTAT+AGG - chr5_3:48187080-48187099 Msa0815180:intron 30.0%
! TAGAAGGTCGCAATTTTATA+GGG - chr5_3:48187081-48187100 Msa0815180:intron 30.0%
CTCATAAATTTAGCGTATGA+TGG - chr5_3:48187259-48187278 Msa0815180:CDS 30.0%
AAATAAATCCACAAAAGTGG+AGG + chr5_3:48187352-48187371 None:intergenic 30.0%
! AGTGTTGTTGAACTGATTAA+TGG - chr5_3:48187390-48187409 Msa0815180:intron 30.0%
!!! TCTGTTTTTTTTGAACTGAG+TGG + chr5_3:48187506-48187525 None:intergenic 30.0%
! AAAGAGTTTCATTGAGTTGT+CGG - chr5_3:48187528-48187547 Msa0815180:intron 30.0%
TTAAATCGAAAAAGGGACTA+TGG + chr5_3:48187655-48187674 None:intergenic 30.0%
AGGGACATTAAATCGAAAAA+GGG + chr5_3:48187662-48187681 None:intergenic 30.0%
AAGGGACATTAAATCGAAAA+AGG + chr5_3:48187663-48187682 None:intergenic 30.0%
! TTTTCGATTTAATGTCCCTT+CGG - chr5_3:48187663-48187682 Msa0815180:intron 30.0%
AAGGGACTTATATTATCGAA+GGG + chr5_3:48187716-48187735 None:intergenic 30.0%
TTCGATAATATAAGTCCCTT+CGG - chr5_3:48187716-48187735 Msa0815180:intron 30.0%
ATAGTTCTCTTTATTCCGAA+GGG + chr5_3:48187734-48187753 None:intergenic 30.0%
AATAGTTCTCTTTATTCCGA+AGG + chr5_3:48187735-48187754 None:intergenic 30.0%
!!! TAACATCATAGTCCCTTTTT+TGG - chr5_3:48187754-48187773 Msa0815180:CDS 30.0%
AAGAACATTCTTAATTCCGA+CGG + chr5_3:48187792-48187811 None:intergenic 30.0%
GTAATATCACCATATTTGAG+TGG - chr5_3:48187875-48187894 Msa0815180:CDS 30.0%
ATATTGTTACCACTCTGTTA+TGG + chr5_3:48187977-48187996 None:intergenic 30.0%
! TAGTATGTCTTGCACAATTT+TGG - chr5_3:48188137-48188156 Msa0815180:intron 30.0%
! AGTATGTCTTGCACAATTTT+GGG - chr5_3:48188138-48188157 Msa0815180:intron 30.0%
GAACCTCAATAAAACTTCTT+CGG + chr5_3:48188312-48188331 None:intergenic 30.0%
AGTTGTCCCTAAATACATTA+AGG - chr5_3:48188332-48188351 Msa0815180:intron 30.0%
! AAGGGGTAAGATTGTATTTT+TGG + chr5_3:48188548-48188567 None:intergenic 30.0%
GATGTGTCAAAAGATTAAGA+AGG + chr5_3:48188859-48188878 None:intergenic 30.0%
GTTGAAACAAAACACACAAA+AGG + chr5_3:48188895-48188914 None:intergenic 30.0%
!! GTGACAAAGTTGTGTTTTTA+CGG + chr5_3:48189142-48189161 None:intergenic 30.0%
GATAGTGCATAATATATCCA+AGG + chr5_3:48189342-48189361 None:intergenic 30.0%
AGAAATAGATAAAGAGTCTG+AGG - chr5_3:48189544-48189563 Msa0815180:CDS 30.0%
GAAATAGATAAAGAGTCTGA+GGG - chr5_3:48189545-48189564 Msa0815180:CDS 30.0%
! CGTGATTAGTGAATTTTTGT+TGG + chr5_3:48189649-48189668 None:intergenic 30.0%
!! CCATTAATTGTTTTTCTCAG+AGG + chr5_3:48189733-48189752 None:intergenic 30.0%
! CCTCTGAGAAAAACAATTAA+TGG - chr5_3:48189730-48189749 Msa0815180:CDS 30.0%
ATTTAAGAAGATCTTAAGGG+AGG + chr5_3:48189875-48189894 None:intergenic 30.0%
ATTGTGGTTGATCAATGAAA+AGG + chr5_3:48190181-48190200 None:intergenic 30.0%
CGATGTTAGATTCTATTTAG+TGG - chr5_3:48190260-48190279 Msa0815180:intron 30.0%
CATGTGTTTGGAAAATTAGA+AGG - chr5_3:48190429-48190448 Msa0815180:intron 30.0%
TGTGTTTGGAAAATTAGAAG+GGG - chr5_3:48190431-48190450 Msa0815180:intron 30.0%
! ATCCCTTTTATCATTAACGT+TGG - chr5_3:48190498-48190517 Msa0815180:intron 30.0%
AGCCAACGTTAATGATAAAA+GGG + chr5_3:48190503-48190522 None:intergenic 30.0%
AAGCCAACGTTAATGATAAA+AGG + chr5_3:48190504-48190523 None:intergenic 30.0%
! TGAAAATCTTTTCAAACACC+AGG - chr5_3:48191162-48191181 Msa0815180:CDS 30.0%
AATGAAAAGTGAAAAGAACC+TGG + chr5_3:48191183-48191202 None:intergenic 30.0%
AACTTCCTAGCAGATATAAA+AGG - chr5_3:48191427-48191446 Msa0815180:CDS 30.0%
! CATTACCTTTTATATCTGCT+AGG + chr5_3:48191435-48191454 None:intergenic 30.0%
!! GTTGAAAGTTTTATCCTCTA+TGG - chr5_3:48191467-48191486 Msa0815180:CDS 30.0%
CTTAATGAAATCTCAACTGT+TGG - chr5_3:48191499-48191518 Msa0815180:CDS 30.0%
ATTGGATCATCTAATGTTGT+AGG - chr5_3:48191672-48191691 Msa0815180:CDS 30.0%
! AAGATACTTTTACTGAGACA+TGG + chr5_3:48191843-48191862 None:intergenic 30.0%
!! AAGAATGTCTTTGGAATCTT+CGG + chr5_3:48191893-48191912 None:intergenic 30.0%
TTTGTTGACAAGAATGTCTT+TGG + chr5_3:48191902-48191921 None:intergenic 30.0%
TTACATGAAGTCATTCTTTC+CGG - chr5_3:48191925-48191944 Msa0815180:intron 30.0%
ATTTGATAGAACAGGTCATT+TGG + chr5_3:48192058-48192077 None:intergenic 30.0%
TCACTGTAATTTGATAGAAC+AGG + chr5_3:48192066-48192085 None:intergenic 30.0%
AGTGAAGAATATTACTGATG+AGG - chr5_3:48192081-48192100 Msa0815180:intron 30.0%
AATATTACTGATGAGGTGTA+CGG - chr5_3:48192088-48192107 Msa0815180:intron 30.0%
AAGTACTTTGACAAGACTAT+AGG + chr5_3:48192259-48192278 None:intergenic 30.0%
!! TATAGTCTTGTCAAAGTACT+TGG - chr5_3:48192258-48192277 Msa0815180:intron 30.0%
TTTCCAAATACGAACATTTG+TGG + chr5_3:48192356-48192375 None:intergenic 30.0%
TTGTAATGCAGTTGAAATTG+AGG + chr5_3:48192583-48192602 None:intergenic 30.0%
CAAAAACAACCAAAACATTG+AGG + chr5_3:48192650-48192669 None:intergenic 30.0%
AATATCAACCATCATTACCA+AGG - chr5_3:48192709-48192728 Msa0815180:intron 30.0%
!! TTTGATAACCTTGGTAATGA+TGG + chr5_3:48192720-48192739 None:intergenic 30.0%
TTACCAAGGTTATCAAAATC+GGG - chr5_3:48192723-48192742 Msa0815180:intron 30.0%
AAAATCGCAATCAAAATCGA+AGG - chr5_3:48192789-48192808 Msa0815180:intron 30.0%
! AAATCGAAGGATTTTACTCA+AGG - chr5_3:48192802-48192821 Msa0815180:intron 30.0%
TAAAATGGCAATCAAAATCG+AGG - chr5_3:48192866-48192885 Msa0815180:intron 30.0%
!! ATGAAACAATGATGGATTGA+AGG - chr5_3:48193021-48193040 Msa0815180:intron 30.0%
AAAATCTCGTGTAACTATTG+AGG - chr5_3:48193115-48193134 Msa0815180:intron 30.0%
!! AATGAAAATTTTGGCCCTTT+TGG - chr5_3:48193158-48193177 Msa0815180:intron 30.0%
!! ATGAAAATTTTGGCCCTTTT+GGG - chr5_3:48193159-48193178 Msa0815180:intron 30.0%
GTATTTATAGAACTTGGTCA+TGG - chr5_3:48193181-48193200 Msa0815180:intron 30.0%
!!! AGGATTTTGATGGATTTTGA+AGG + chr5_3:48193271-48193290 None:intergenic 30.0%
!!! CGATTTTGTGCTATTTTGAT+AGG - chr5_3:48193321-48193340 Msa0815180:intron 30.0%
!! ATAGGATTTTGCCTGTTTTT+GGG - chr5_3:48193339-48193358 Msa0815180:intron 30.0%
TGCTTATCAGAAGAAAATCT+CGG - chr5_3:48193584-48193603 Msa0815180:intron 30.0%
AGTTTAATAGGATCATTGTG+AGG + chr5_3:48193707-48193726 None:intergenic 30.0%
GATCCTATTAAACTCATATG+GGG - chr5_3:48193713-48193732 Msa0815180:intron 30.0%
!!! TACTGTTTTTTACCAATGAC+AGG - chr5_3:48194004-48194023 Msa0815180:intron 30.0%
!!! ACTGTTTTTTACCAATGACA+GGG - chr5_3:48194005-48194024 Msa0815180:intron 30.0%
TACATATCATATTGCTCTTC+GGG + chr5_3:48194073-48194092 None:intergenic 30.0%
GAGTTTGTGAAGAAGAAATA+TGG - chr5_3:48194223-48194242 Msa0815180:intron 30.0%
!!! TGGAACAGTTTTTAAGACAA+AGG - chr5_3:48194308-48194327 Msa0815180:intron 30.0%
! AGACAAAGGTTCTTTTTCTT+TGG - chr5_3:48194322-48194341 Msa0815180:intron 30.0%
! AAAGGTTCTTTTTCTTTGGA+GGG - chr5_3:48194326-48194345 Msa0815180:intron 30.0%
TCAATTGAAAGGAAACATGT+TGG + chr5_3:48194391-48194410 None:intergenic 30.0%
AACATGTTTCCTTTCAATTG+AGG - chr5_3:48194390-48194409 Msa0815180:intron 30.0%
!! GTTGATTTTCACAATCATCA+TGG + chr5_3:48194498-48194517 None:intergenic 30.0%
TCAAATAAACAAATCCGAAC+AGG + chr5_3:48194943-48194962 None:intergenic 30.0%
! TTTTCATAAGCTCTCTCAAA+TGG + chr5_3:48194996-48195015 None:intergenic 30.0%
AATTGTATAAGAGCTCACAT+CGG - chr5_3:48195114-48195133 Msa0815180:intron 30.0%
CTGACAATGTGTTTATAAGT+GGG - chr5_3:48195161-48195180 Msa0815180:intron 30.0%
TGACAATGTGTTTATAAGTG+GGG - chr5_3:48195162-48195181 Msa0815180:intron 30.0%
!! ATTATCGCTTTTACGTAGTT+TGG - chr5_3:48195305-48195324 Msa0815180:intron 30.0%
TTTACTTGGAAACATGCTTA+TGG + chr5_3:48195627-48195646 None:intergenic 30.0%
CCATCATAGAATTCTTTACT+TGG + chr5_3:48195641-48195660 None:intergenic 30.0%
CCAAGTAAAGAATTCTATGA+TGG - chr5_3:48195638-48195657 Msa0815180:intron 30.0%
! GCTTATTTCTCTTACAATGT+TGG + chr5_3:48195678-48195697 None:intergenic 30.0%
GATTACTGGAAGACTTAAAA+AGG - chr5_3:48195826-48195845 Msa0815180:intron 30.0%
ATGTATTGCGTGACAATATT+TGG - chr5_3:48196164-48196183 Msa0815180:intron 30.0%
CGAACATTAACTGAAAAGTT+AGG + chr5_3:48196330-48196349 None:intergenic 30.0%
! AACATTAGCTCTTTGTCTAT+TGG + chr5_3:48196442-48196461 None:intergenic 30.0%
AGATATTGTCTTTGGATTGT+AGG - chr5_3:48196561-48196580 Msa0815180:intron 30.0%
CACAGAGTTACTATTAACTA+AGG + chr5_3:48196598-48196617 None:intergenic 30.0%
TAGTTAATAGTAACTCTGTG+TGG - chr5_3:48196598-48196617 Msa0815180:intron 30.0%
AATCGACAAAATATCAGATG+AGG - chr5_3:48196988-48197007 Msa0815180:intron 30.0%
AAAATCATTGAACCATACAC+GGG + chr5_3:48197022-48197041 None:intergenic 30.0%
CTTGAATGTATTCAAGGATT+TGG - chr5_3:48197077-48197096 Msa0815180:intron 30.0%
CTAAATCTTTATGCTACACA+AGG - chr5_3:48197219-48197238 Msa0815180:intron 30.0%
AGTAAAAACTTGTCACGATT+TGG - chr5_3:48197376-48197395 Msa0815180:five_prime_UTR 30.0%
! TAAATTGAGACTGGAGCTTT+TGG + chr5_3:48186172-48186191 None:intergenic 35.0%
TTGGAACATTAGTGCAAAGT+TGG - chr5_3:48186514-48186533 Msa0815180:three_prime_UTR 35.0%
! CAAGTTTAGAACACTACGAA+AGG + chr5_3:48186926-48186945 None:intergenic 35.0%
TTGTGTGAAACAATAGAGTG+TGG - chr5_3:48187118-48187137 Msa0815180:CDS 35.0%
TGTGTGAAACAATAGAGTGT+GGG - chr5_3:48187119-48187138 Msa0815180:CDS 35.0%
AAGTGGAGGAAACAAACTAT+TGG + chr5_3:48187338-48187357 None:intergenic 35.0%
AATCAGTTCAACAACACTTG+TGG + chr5_3:48187388-48187407 None:intergenic 35.0%
GACAACTCAATGAAACTCTT+TGG + chr5_3:48187529-48187548 None:intergenic 35.0%
! AAGAGTTTCATTGAGTTGTC+GGG - chr5_3:48187529-48187548 Msa0815180:intron 35.0%
AGAACACTCTTAATTCCGAA+GGG + chr5_3:48187627-48187646 None:intergenic 35.0%
AAGAACACTCTTAATTCCGA+AGG + chr5_3:48187628-48187647 None:intergenic 35.0%
AGACCATTCTTAATTCCGAA+GGG + chr5_3:48187681-48187700 None:intergenic 35.0%
AAGACCATTCTTAATTCCGA+AGG + chr5_3:48187682-48187701 None:intergenic 35.0%
GAAGGGACTTATATTATCGA+AGG + chr5_3:48187717-48187736 None:intergenic 35.0%
TTGGAATAATAATGTCCCGT+CGG - chr5_3:48187773-48187792 Msa0815180:CDS 35.0%
AGAACATTCTTAATTCCGAC+GGG + chr5_3:48187791-48187810 None:intergenic 35.0%
GTAGTGCCATATAGATACTT+TGG - chr5_3:48187900-48187919 Msa0815180:CDS 35.0%
TGCTTAAGACCACTCAAATA+TGG + chr5_3:48187954-48187973 None:intergenic 35.0%
GTGGTTTCAATATCAAAGAG+TGG - chr5_3:48188006-48188025 Msa0815180:CDS 35.0%
ACTCAACCTAGTAACAACTT+CGG - chr5_3:48188201-48188220 Msa0815180:intron 35.0%
TATCTACCGAAGTTGTTACT+AGG + chr5_3:48188210-48188229 None:intergenic 35.0%
!!! CTACCGAAGAAGTTTTATTG+AGG - chr5_3:48188306-48188325 Msa0815180:intron 35.0%
!!! TTTTTTTTTTGTTGTGGCCG+AGG - chr5_3:48189303-48189322 Msa0815180:CDS 35.0%
TGCATAATATATCCAAGGTC+CGG + chr5_3:48189337-48189356 None:intergenic 35.0%
TATCTCTACCAACTGAGTTA+AGG - chr5_3:48189358-48189377 Msa0815180:CDS 35.0%
! TTTTCCCAACTTATTGTTCC+TGG - chr5_3:48190095-48190114 Msa0815180:intron 35.0%
TGATCCAGGAACAATAAGTT+GGG + chr5_3:48190102-48190121 None:intergenic 35.0%
TTGATCCAGGAACAATAAGT+TGG + chr5_3:48190103-48190122 None:intergenic 35.0%
AACTTATTGTTCCTGGATCA+AGG - chr5_3:48190102-48190121 Msa0815180:intron 35.0%
AAATTAAACCACCTTGATCC+AGG + chr5_3:48190116-48190135 None:intergenic 35.0%
!!! TTTTTTGTGGATGGACATTG+TGG + chr5_3:48190197-48190216 None:intergenic 35.0%
!! ATGAAGTGTTTTTCTCGCAA+TGG + chr5_3:48190309-48190328 None:intergenic 35.0%
! AGAAGCTTTGTACTACAACA+AGG + chr5_3:48190752-48190771 None:intergenic 35.0%
AAAACCAATGTCATCATGCA+TGG + chr5_3:48190997-48191016 None:intergenic 35.0%
TTCATCAAAAGGGCTAACTA+AGG - chr5_3:48191040-48191059 Msa0815180:intron 35.0%
GAAGAGATGTAATACCATTG+AGG - chr5_3:48191075-48191094 Msa0815180:intron 35.0%
TCGAATAATTGAGATTTCGC+TGG - chr5_3:48191527-48191546 Msa0815180:CDS 35.0%
!! TGGAGAGTTCTTTCTAGTTA+GGG + chr5_3:48191823-48191842 None:intergenic 35.0%
!! ATGGAGAGTTCTTTCTAGTT+AGG + chr5_3:48191824-48191843 None:intergenic 35.0%
! AATGCAGTTTAATTTCGTGC+AGG - chr5_3:48191865-48191884 Msa0815180:intron 35.0%
ATATTACTGATGAGGTGTAC+GGG - chr5_3:48192089-48192108 Msa0815180:intron 35.0%
GGAAAATATGAACCTGAAGT+CGG - chr5_3:48192115-48192134 Msa0815180:intron 35.0%
! CTCAAGTCATACACACTTTT+TGG + chr5_3:48192169-48192188 None:intergenic 35.0%
TGACCACAAATGTTCGTATT+TGG - chr5_3:48192350-48192369 Msa0815180:intron 35.0%
GTGATTCTTACCCTTGAATA+AGG + chr5_3:48192436-48192455 None:intergenic 35.0%
!! ATTTGTTGGCCTCAATGTTT+TGG - chr5_3:48192638-48192657 Msa0815180:intron 35.0%
GACTTTACTTCAAGTCGAAA+GGG - chr5_3:48192745-48192764 Msa0815180:intron 35.0%
TCGATATACGATAGCAAAGT+CGG - chr5_3:48192837-48192856 Msa0815180:intron 35.0%
!! ACAATGATGGATTGAAGGAA+AGG - chr5_3:48193026-48193045 Msa0815180:intron 35.0%
! TGTAACTATTGAGGAAGTGT+GGG - chr5_3:48193124-48193143 Msa0815180:intron 35.0%
ACTTGGTCATGGATTCAAAT+CGG - chr5_3:48193192-48193211 Msa0815180:intron 35.0%
AATCGGGTCAATTTATGAAC+CGG - chr5_3:48193209-48193228 Msa0815180:intron 35.0%
! ATAAGGGTCAATTTTTGACC+CGG + chr5_3:48193231-48193250 None:intergenic 35.0%
! TCAAAAACGCAGGATTTTGA+TGG + chr5_3:48193281-48193300 None:intergenic 35.0%
! CAAAATCCTGCGTTTTTGAA+CGG - chr5_3:48193282-48193301 Msa0815180:intron 35.0%
! GATAGGATTTTGCCTGTTTT+TGG - chr5_3:48193338-48193357 Msa0815180:intron 35.0%
!! AAGAAGTATTCGCATTAGCA+TGG + chr5_3:48193478-48193497 None:intergenic 35.0%
ACCAAGGACAGTGTTATAAA+TGG - chr5_3:48193514-48193533 Msa0815180:intron 35.0%
ACCATTTATAACACTGTCCT+TGG + chr5_3:48193518-48193537 None:intergenic 35.0%
GCTTATCAGAAGAAAATCTC+GGG - chr5_3:48193585-48193604 Msa0815180:intron 35.0%
TATGTTTGTCACTGGAGAAT+AGG + chr5_3:48193615-48193634 None:intergenic 35.0%
GATTTGACTATGTTTGTCAC+TGG + chr5_3:48193623-48193642 None:intergenic 35.0%
!!! GTTTTTGTTTTTCCAGTTCC+TGG + chr5_3:48193743-48193762 None:intergenic 35.0%
GTGTTCTGATTCTTAACTTC+AGG + chr5_3:48193790-48193809 None:intergenic 35.0%
TCACTTGAACATGGTTCATA+TGG - chr5_3:48193878-48193897 Msa0815180:intron 35.0%
! CTTGGTGACATAGTTCTATT+TGG - chr5_3:48193902-48193921 Msa0815180:intron 35.0%
GAGAGTTATAGTCATGTGAA+AGG - chr5_3:48194145-48194164 Msa0815180:intron 35.0%
TTTCATACAAGAAACGGTGT+AGG - chr5_3:48194176-48194195 Msa0815180:intron 35.0%
! CAAAGGTTCTTTTTCTTTGG+AGG - chr5_3:48194325-48194344 Msa0815180:intron 35.0%
ATGTTTCCTTTCAATTGAGG+TGG - chr5_3:48194393-48194412 Msa0815180:intron 35.0%
AATCATCATGGAAAGCTTGT+TGG + chr5_3:48194486-48194505 None:intergenic 35.0%
!! GAAACAAGTGCAGTTTTTAG+TGG - chr5_3:48194711-48194730 Msa0815180:intron 35.0%
CAATCAAGATACAACGTTTG+AGG + chr5_3:48194795-48194814 None:intergenic 35.0%
CTCAAACGTTGTATCTTGAT+TGG - chr5_3:48194793-48194812 Msa0815180:intron 35.0%
GCTGAGTTATAAACAGCTTA+TGG + chr5_3:48195034-48195053 None:intergenic 35.0%
CCACTTATAAACACATTGTC+AGG + chr5_3:48195163-48195182 None:intergenic 35.0%
CCTGACAATGTGTTTATAAG+TGG - chr5_3:48195160-48195179 Msa0815180:intron 35.0%
GACAATGTGTTTATAAGTGG+GGG - chr5_3:48195163-48195182 Msa0815180:intron 35.0%
! AATCACAAACCAGTTTTGCA+GGG - chr5_3:48195187-48195206 Msa0815180:intron 35.0%
AAGCTATAACAAGCATTTCC+TGG - chr5_3:48195694-48195713 Msa0815180:intron 35.0%
AGCTATAACAAGCATTTCCT+GGG - chr5_3:48195695-48195714 Msa0815180:intron 35.0%
TAGCAGAATTTGGAAAGACA+AGG - chr5_3:48196217-48196236 Msa0815180:intron 35.0%
ACAAGGAATAAAGTCAGCAT+AGG - chr5_3:48196234-48196253 Msa0815180:intron 35.0%
CAAGGAATAAAGTCAGCATA+GGG - chr5_3:48196235-48196254 Msa0815180:intron 35.0%
GTTAATGTTCGTTCTGTTGA+TGG - chr5_3:48196339-48196358 Msa0815180:intron 35.0%
ACTGTTAGATCAAATTTGGG+TGG - chr5_3:48196399-48196418 Msa0815180:intron 35.0%
TCAAATTTGGGTGGAAAAGT+TGG - chr5_3:48196408-48196427 Msa0815180:intron 35.0%
AGCTAATGTTGCTATCACTA+GGG - chr5_3:48196452-48196471 Msa0815180:intron 35.0%
AAAGGTTGTTCTTGATGCTA+TGG - chr5_3:48196623-48196642 Msa0815180:intron 35.0%
TTGTTTCCATAATGCTGATG+AGG - chr5_3:48196653-48196672 Msa0815180:intron 35.0%
GAAATTGGATCAAGCTATTG+AGG - chr5_3:48196680-48196699 Msa0815180:intron 35.0%
CAGAAACATCTACTTTCTCT+AGG - chr5_3:48196775-48196794 Msa0815180:intron 35.0%
CGCGATTTGTGAAAACATAT+TGG - chr5_3:48197043-48197062 Msa0815180:intron 35.0%
AAGGATTTGGACACTATGTT+TGG - chr5_3:48197090-48197109 Msa0815180:intron 35.0%
TTCACAAATTGGAGTTCACA+AGG - chr5_3:48197307-48197326 Msa0815180:intron 35.0%
GGCTTGAAGTAAATTGAGAC+TGG + chr5_3:48186181-48186200 None:intergenic 40.0%
CATCGGAAAATACATACCGA+CGG + chr5_3:48186229-48186248 None:intergenic 40.0%
GTGTGAAACAATAGAGTGTG+GGG - chr5_3:48187120-48187139 Msa0815180:CDS 40.0%
!! GTTTGTTTCCTCCACTTTTG+TGG - chr5_3:48187341-48187360 Msa0815180:CDS 40.0%
GTTCAACAACACTTGTGGAT+AGG + chr5_3:48187383-48187402 None:intergenic 40.0%
TGCGACAACAGTTACTCTAA+TGG + chr5_3:48187438-48187457 None:intergenic 40.0%
CGTCAACACAAGTCAAGAAA+GGG + chr5_3:48187572-48187591 None:intergenic 40.0%
TCGTCAACACAAGTCAAGAA+AGG + chr5_3:48187573-48187592 None:intergenic 40.0%
!!! TCTCCTTTTTTCTGTCCCTT+CGG - chr5_3:48187609-48187628 Msa0815180:intron 40.0%
ATTCCGAAGGGACAGAAAAA+AGG + chr5_3:48187615-48187634 None:intergenic 40.0%
TGTCCCTTCGGAATTAAGAA+TGG - chr5_3:48187675-48187694 Msa0815180:intron 40.0%
GTGGTAACACCATATTTGAG+TGG - chr5_3:48187942-48187961 Msa0815180:CDS 40.0%
TCTTAAGCACCATAACAGAG+TGG - chr5_3:48187965-48187984 Msa0815180:CDS 40.0%
! TGGTCTTAGTACCATATTCG+AGG - chr5_3:48188026-48188045 Msa0815180:CDS 40.0%
GGTCTTAGTACCATATTCGA+GGG - chr5_3:48188027-48188046 Msa0815180:CDS 40.0%
GAGATTTACACCCTCGAATA+TGG + chr5_3:48188040-48188059 None:intergenic 40.0%
CATAATATATCCAAGGTCCG+GGG + chr5_3:48189335-48189354 None:intergenic 40.0%
GCATAATATATCCAAGGTCC+GGG + chr5_3:48189336-48189355 None:intergenic 40.0%
GACTCAGGTACAACACAAAA+CGG - chr5_3:48189578-48189597 Msa0815180:CDS 40.0%
ACTCAGGTACAACACAAAAC+GGG - chr5_3:48189579-48189598 Msa0815180:CDS 40.0%
TAGATTTGGGTCGATCTACT+TGG + chr5_3:48189625-48189644 None:intergenic 40.0%
CAACCTAACAAACCCGTATA+CGG - chr5_3:48189673-48189692 Msa0815180:CDS 40.0%
AACCTAACAAACCCGTATAC+GGG - chr5_3:48189674-48189693 Msa0815180:CDS 40.0%
TTATTGTTCCTGGATCAAGG+TGG - chr5_3:48190105-48190124 Msa0815180:intron 40.0%
TGAAGGGAGATTCATGTGTT+TGG - chr5_3:48190417-48190436 Msa0815180:intron 40.0%
GAAACCATGCATGATGACAT+TGG - chr5_3:48190990-48191009 Msa0815180:intron 40.0%
!!! ACATTGGTTTTGTGCTATGC+AGG - chr5_3:48191006-48191025 Msa0815180:intron 40.0%
GGCTAACTAAGGAACAAAGA+TGG - chr5_3:48191051-48191070 Msa0815180:intron 40.0%
ACCATTGAGGAATGTCTTCA+TGG - chr5_3:48191088-48191107 Msa0815180:intron 40.0%
ACCATGAAGACATTCCTCAA+TGG + chr5_3:48191092-48191111 None:intergenic 40.0%
TTTATCCTCTATGGTCTCGT+TGG - chr5_3:48191476-48191495 Msa0815180:CDS 40.0%
GGGTTATAGATGTTGTGCAA+CGG + chr5_3:48191803-48191822 None:intergenic 40.0%
!! ATTCTTTCCGGCATTGATAG+AGG - chr5_3:48191937-48191956 Msa0815180:intron 40.0%
TGTGTTTCCTCTATCAATGC+CGG + chr5_3:48191947-48191966 None:intergenic 40.0%
AAGCTTCTCTTTGCGAAATC+AGG - chr5_3:48192002-48192021 Msa0815180:intron 40.0%
GATAGAACAGGTCATTTGGA+GGG + chr5_3:48192054-48192073 None:intergenic 40.0%
TGATAGAACAGGTCATTTGG+AGG + chr5_3:48192055-48192074 None:intergenic 40.0%
TATTACTGATGAGGTGTACG+GGG - chr5_3:48192090-48192109 Msa0815180:intron 40.0%
AAAGTGTGTATGACTTGAGC+AGG - chr5_3:48192170-48192189 Msa0815180:intron 40.0%
!! AAGTGTTGCAGCCTTATTCA+AGG - chr5_3:48192422-48192441 Msa0815180:CDS 40.0%
!! AGTGTTGCAGCCTTATTCAA+GGG - chr5_3:48192423-48192442 Msa0815180:CDS 40.0%
TGCAGTTGTGTCTTGATTCT+TGG - chr5_3:48192520-48192539 Msa0815180:five_prime_UTR 40.0%
! GTGATCAAATGCAGTTGATG+TGG - chr5_3:48192557-48192576 Msa0815180:intron 40.0%
!! AGTCCCGATTTTGATAACCT+TGG + chr5_3:48192729-48192748 None:intergenic 40.0%
GGACTTTACTTCAAGTCGAA+AGG - chr5_3:48192744-48192763 Msa0815180:intron 40.0%
! TCGAAAGGGACTAGCAAAAT+CGG - chr5_3:48192759-48192778 Msa0815180:intron 40.0%
CGATATACGATAGCAAAGTC+GGG - chr5_3:48192838-48192857 Msa0815180:intron 40.0%
AGGAAAGGATGATGAATCGA+AGG - chr5_3:48193041-48193060 Msa0815180:intron 40.0%
AAGGATGATGAATCGAAGGA+AGG - chr5_3:48193045-48193064 Msa0815180:intron 40.0%
GTGTAACTATTGAGGAAGTG+TGG - chr5_3:48193123-48193142 Msa0815180:intron 40.0%
! GTAACTATTGAGGAAGTGTG+GGG - chr5_3:48193125-48193144 Msa0815180:intron 40.0%
! TAACTATTGAGGAAGTGTGG+GGG - chr5_3:48193126-48193145 Msa0815180:intron 40.0%
CTTGGTCATGGATTCAAATC+GGG - chr5_3:48193193-48193212 Msa0815180:intron 40.0%
ATCGGGTCAATTTATGAACC+GGG - chr5_3:48193210-48193229 Msa0815180:intron 40.0%
TGAAATCCGTTCAAAAACGC+AGG + chr5_3:48193291-48193310 None:intergenic 40.0%
CATAGCAAAGTCCCAAAAAC+AGG + chr5_3:48193353-48193372 None:intergenic 40.0%
!!! CTGTTTTTGGGACTTTGCTA+TGG - chr5_3:48193351-48193370 Msa0815180:intron 40.0%
TACGTAAAGTCGCAAAAACC+AGG - chr5_3:48193391-48193410 Msa0815180:intron 40.0%
! AGTCGCAAAAACCAGGATTT+TGG - chr5_3:48193398-48193417 Msa0815180:intron 40.0%
! GTCGCAAAAACCAGGATTTT+GGG - chr5_3:48193399-48193418 Msa0815180:intron 40.0%
GGACCCCATATGAGTTTAAT+AGG + chr5_3:48193719-48193738 None:intergenic 40.0%
!! TTTGTTTTTCCAGTTCCTGG+TGG + chr5_3:48193740-48193759 None:intergenic 40.0%
TCCAACAAATACTGCAGTGT+TGG - chr5_3:48193820-48193839 Msa0815180:intron 40.0%
! AACAAATACTGCAGTGTTGG+CGG - chr5_3:48193823-48193842 Msa0815180:intron 40.0%
ACGCTTTCATCACATAGCTA+AGG - chr5_3:48193853-48193872 Msa0815180:intron 40.0%
GCTAAGGATTCACTTGAACA+TGG - chr5_3:48193869-48193888 Msa0815180:intron 40.0%
GAACATGGTTCATATGGTCT+TGG - chr5_3:48193884-48193903 Msa0815180:intron 40.0%
!! AGGTCTTGGTGAAGTGTTTT+TGG - chr5_3:48193958-48193977 Msa0815180:intron 40.0%
!!! GTTTTTTACCAATGACAGGG+TGG - chr5_3:48194008-48194027 Msa0815180:intron 40.0%
!! GTTAAGTGTTGGGATGAGTA+TGG - chr5_3:48194288-48194307 Msa0815180:intron 40.0%
TCATCACCACCTCAATTGAA+AGG + chr5_3:48194402-48194421 None:intergenic 40.0%
CCAAGCAAAGCAAAAACTCT+TGG + chr5_3:48194520-48194539 None:intergenic 40.0%
! CCAAGAGTTTTTGCTTTGCT+TGG - chr5_3:48194517-48194536 Msa0815180:intron 40.0%
! GAGTTTTTGCTTTGCTTGGA+TGG - chr5_3:48194521-48194540 Msa0815180:intron 40.0%
! CAATCACAAACCAGTTTTGC+AGG - chr5_3:48195186-48195205 Msa0815180:intron 40.0%
! TTTTGTGTCAGATAGCTGAC+AGG - chr5_3:48195513-48195532 Msa0815180:intron 40.0%
TTTGTGTCAGATAGCTGACA+GGG - chr5_3:48195514-48195533 Msa0815180:intron 40.0%
CTTGGAAACATGCTTATGGA+TGG + chr5_3:48195623-48195642 None:intergenic 40.0%
TATAACAAGCATTTCCTGGG+AGG - chr5_3:48195698-48195717 Msa0815180:intron 40.0%
AGGGATCATATCACCATACA+AGG - chr5_3:48196254-48196273 Msa0815180:intron 40.0%
TCATGAACTTGTGCCTTGTA+TGG + chr5_3:48196270-48196289 None:intergenic 40.0%
TGTACTGCTTCACTTTCTCT+TGG + chr5_3:48196296-48196315 None:intergenic 40.0%
AGAGAAAGTGAAGCAGTACA+TGG - chr5_3:48196296-48196315 Msa0815180:intron 40.0%
AGTGAAGCAGTACATGGTTT+CGG - chr5_3:48196302-48196321 Msa0815180:intron 40.0%
GAGCTAATGTTGCTATCACT+AGG - chr5_3:48196451-48196470 Msa0815180:intron 40.0%
TAGTAACTCTGTGTGGAGAA+AGG - chr5_3:48196605-48196624 Msa0815180:intron 40.0%
TCTTGTCCTCATCAGCATTA+TGG + chr5_3:48196662-48196681 None:intergenic 40.0%
TGCTGATGAGGACAAGAAAT+TGG - chr5_3:48196665-48196684 Msa0815180:intron 40.0%
GGATTGCTCAGTTGGATATT+AGG - chr5_3:48197240-48197259 Msa0815180:intron 40.0%
!! CTTGTCACGATTTGGTGAAA+AGG - chr5_3:48197384-48197403 Msa0815180:five_prime_UTR 40.0%
! ATTGAGACTGGAGCTTTTGG+CGG + chr5_3:48186169-48186188 None:intergenic 45.0%
!!! GAGCGCAGCAATTTTTTGCA+GGG + chr5_3:48186667-48186686 None:intergenic 45.0%
!!! TGAGCGCAGCAATTTTTTGC+AGG + chr5_3:48186668-48186687 None:intergenic 45.0%
GCACTACGACCACTCAAATA+TGG + chr5_3:48187887-48187906 None:intergenic 45.0%
! TCGAGGGTGTAAATCTCGAA+CGG - chr5_3:48188043-48188062 Msa0815180:CDS 45.0%
TTAACCGCACAGTTGTAGCT+GGG - chr5_3:48188084-48188103 Msa0815180:intron 45.0%
! TAGCTGGGCGTGTTTTATCT+TGG - chr5_3:48188099-48188118 Msa0815180:intron 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG + chr5_3:48188169-48188188 None:intergenic 45.0%
GAGGGAATTAGATCTGACTC+AGG - chr5_3:48189563-48189582 Msa0815180:CDS 45.0%
TTAAGCCAACGAGACCATAG+AGG + chr5_3:48191484-48191503 None:intergenic 45.0%
TAGATGTTGTGCAACGGACA+TGG + chr5_3:48191797-48191816 None:intergenic 45.0%
TTTGGAGGGTGGAAGTAGTT+GGG + chr5_3:48192040-48192059 None:intergenic 45.0%
ATTTGGAGGGTGGAAGTAGT+TGG + chr5_3:48192041-48192060 None:intergenic 45.0%
!! GCAATAAGATCACCGACTTC+AGG + chr5_3:48192130-48192149 None:intergenic 45.0%
GAAAGCCTTGAACTCAGAGA+TGG - chr5_3:48192372-48192391 Msa0815180:intron 45.0%
TCCTTCCATCTCTGAGTTCA+AGG + chr5_3:48192380-48192399 None:intergenic 45.0%
! CGAAAGGGACTAGCAAAATC+GGG - chr5_3:48192760-48192779 Msa0815180:intron 45.0%
CAAAGTCGGGACTCGTAAAA+TGG - chr5_3:48192851-48192870 Msa0815180:intron 45.0%
GATGATGAATCGAAGGAAGG+AGG - chr5_3:48193048-48193067 Msa0815180:intron 45.0%
AGGAAGGAGGCAATCAAGTT+AGG - chr5_3:48193061-48193080 Msa0815180:intron 45.0%
CGACTTAAGTCCCAAAATCC+TGG + chr5_3:48193412-48193431 None:intergenic 45.0%
GCCAACACTGCAGTATTTGT+TGG + chr5_3:48193824-48193843 None:intergenic 45.0%
!! CTACTTTTCCACCCTGTCAT+TGG + chr5_3:48194019-48194038 None:intergenic 45.0%
GACAGGGTGGAAAAGTAGTT+TGG - chr5_3:48194021-48194040 Msa0815180:intron 45.0%
!! TTGGCGTTTGGTTTGACTCA+TGG + chr5_3:48194467-48194486 None:intergenic 45.0%
!! ATGGAAAGCTTGTTGGCGTT+TGG + chr5_3:48194479-48194498 None:intergenic 45.0%
GCTATTCCATTGCAACTACC+TGG - chr5_3:48194769-48194788 Msa0815180:intron 45.0%
! AAGATACAACGTTTGAGGCC+AGG + chr5_3:48194790-48194809 None:intergenic 45.0%
TGAGAGACAACTTCCAGCAA+TGG - chr5_3:48194819-48194838 Msa0815180:intron 45.0%
TCCAGCAATGGTCAAAAGCA+AGG - chr5_3:48194831-48194850 Msa0815180:intron 45.0%
!! ACCTTGCTTTTGACCATTGC+TGG + chr5_3:48194835-48194854 None:intergenic 45.0%
CTAACACAACCCTGCAAAAC+TGG + chr5_3:48195199-48195218 None:intergenic 45.0%
ATAGCTGACAGGGCTGAATA+TGG - chr5_3:48195524-48195543 Msa0815180:intron 45.0%
TTCCTGGGAGGAAAGATGTT+TGG - chr5_3:48195710-48195729 Msa0815180:intron 45.0%
AACCAAACATCTTTCCTCCC+AGG + chr5_3:48195715-48195734 None:intergenic 45.0%
!! GCTGCTATCTCTGAGATTAC+TGG - chr5_3:48195812-48195831 Msa0815180:intron 45.0%
!! CGTTCTGTTGATGGCTTTCA+AGG - chr5_3:48196348-48196367 Msa0815180:intron 45.0%
!! TCTGTTGATGGCTTTCAAGG+TGG - chr5_3:48196351-48196370 Msa0815180:intron 45.0%
ATGTTGCTATCACTAGGGCT+AGG - chr5_3:48196457-48196476 Msa0815180:intron 45.0%
GAGGAATAACTACCCGTGTA+TGG - chr5_3:48197007-48197026 Msa0815180:intron 45.0%
CTACACAAGGATTGCTCAGT+TGG - chr5_3:48197232-48197251 Msa0815180:intron 45.0%
!! CAATTTAATAAAAAAAAAAA+GGG + chr5_3:48189939-48189958 None:intergenic 5.0%
!! TCAATTTAATAAAAAAAAAA+AGG + chr5_3:48189940-48189959 None:intergenic 5.0%
!!! TTTTTGTAAAATTTAAAAAA+TGG + chr5_3:48196008-48196027 None:intergenic 5.0%
ACTTCAAGCCATCACTGCCT+CGG - chr5_3:48186191-48186210 Msa0815180:three_prime_UTR 50.0%
CGGAAAATACATACCGACGG+TGG + chr5_3:48186226-48186245 None:intergenic 50.0%
GTTAACCGCACAGTTGTAGC+TGG - chr5_3:48188083-48188102 Msa0815180:intron 50.0%
! CTGGGCGTGTTTTATCTTGG+AGG - chr5_3:48188102-48188121 Msa0815180:intron 50.0%
! GGCGTGTTTTATCTTGGAGG+CGG - chr5_3:48188105-48188124 Msa0815180:intron 50.0%
ACGTCTTAAAGAGAGCGACC+TGG - chr5_3:48188173-48188192 Msa0815180:intron 50.0%
! TACTAGGTTGAGTCACGACC+AGG + chr5_3:48188194-48188213 None:intergenic 50.0%
CCTCGTGACCTTAACTCAGT+TGG + chr5_3:48189369-48189388 None:intergenic 50.0%
CCAACTGAGTTAAGGTCACG+AGG - chr5_3:48189366-48189385 Msa0815180:CDS 50.0%
! TCGCATGGGCTAATTCGAAG+CGG + chr5_3:48190592-48190611 None:intergenic 50.0%
GAATTAGCCCATGCGAAGCA+CGG - chr5_3:48190596-48190615 Msa0815180:intron 50.0%
AATTAGCCCATGCGAAGCAC+GGG - chr5_3:48190597-48190616 Msa0815180:intron 50.0%
AACTAACCCGTGCTAAGCAC+GGG + chr5_3:48190623-48190642 None:intergenic 50.0%
CAACTAACCCGTGCTAAGCA+CGG + chr5_3:48190624-48190643 None:intergenic 50.0%
TTGAGATTTCGCTGGAGTGC+TGG - chr5_3:48191535-48191554 Msa0815180:CDS 50.0%
AGAACAGGTCATTTGGAGGG+TGG + chr5_3:48192051-48192070 None:intergenic 50.0%
GCCTTGAACTCAGAGATGGA+AGG - chr5_3:48192376-48192395 Msa0815180:intron 50.0%
AAACTCATATGGGGTCCACC+AGG - chr5_3:48193722-48193741 Msa0815180:intron 50.0%
!! AAATACTGCAGTGTTGGCGG+TGG - chr5_3:48193826-48193845 Msa0815180:intron 50.0%
GTGTAGGTACCATTGTCCTG+TGG - chr5_3:48194192-48194211 Msa0815180:intron 50.0%
GTACCATTGTCCTGTGGCAT+TGG - chr5_3:48194198-48194217 Msa0815180:intron 50.0%
ACAAACTCCTCCAATGCCAC+AGG + chr5_3:48194211-48194230 None:intergenic 50.0%
TTGAGGCCAGGTAGTTGCAA+TGG + chr5_3:48194778-48194797 None:intergenic 50.0%
GGTGAAAAGGTGACACGATC+TGG - chr5_3:48197397-48197416 Msa0815180:five_prime_UTR 50.0%
AAGGTGACACGATCTGGTGA+AGG - chr5_3:48197403-48197422 Msa0815180:five_prime_UTR 50.0%
ATCTGGTGAAGGCCAAAGCA+TGG - chr5_3:48197414-48197433 Msa0815180:five_prime_UTR 50.0%
TCTGGTGAAGGCCAAAGCAT+GGG - chr5_3:48197415-48197434 Msa0815180:five_prime_UTR 50.0%
TGGCGGAGAAGCAACAAGCT+AGG + chr5_3:48186152-48186171 None:intergenic 55.0%
! GTTTTATCTTGGAGGCGGCG+TGG - chr5_3:48188110-48188129 Msa0815180:intron 55.0%
AAGGTCCGGGGTTCAAACCT+CGG + chr5_3:48189323-48189342 None:intergenic 55.0%
! CGCCCGTATACGGGTTTGTT+AGG + chr5_3:48189679-48189698 None:intergenic 55.0%
TTGGTTTCGCGCCCGTATAC+GGG + chr5_3:48189688-48189707 None:intergenic 55.0%
CTTGGTTTCGCGCCCGTATA+CGG + chr5_3:48189689-48189708 None:intergenic 55.0%
! CATGGGCTAATTCGAAGCGG+GGG + chr5_3:48190589-48190608 None:intergenic 55.0%
! GCATGGGCTAATTCGAAGCG+GGG + chr5_3:48190590-48190609 None:intergenic 55.0%
! CGCATGGGCTAATTCGAAGC+GGG + chr5_3:48190591-48190610 None:intergenic 55.0%
! CCTCAGAGAGCACGAGTCTT+TGG + chr5_3:48190819-48190838 None:intergenic 55.0%
CCAAAGACTCGTGCTCTCTG+AGG - chr5_3:48190816-48190835 Msa0815180:intron 55.0%
ACTGATGAGGTGTACGGGGT+AGG - chr5_3:48192094-48192113 Msa0815180:intron 55.0%
ATATGGGGTCCACCAGGAAC+TGG - chr5_3:48193728-48193747 Msa0815180:intron 55.0%
CCTCCAATGCCACAGGACAA+TGG + chr5_3:48194204-48194223 None:intergenic 55.0%
! CCATTGTCCTGTGGCATTGG+AGG - chr5_3:48194201-48194220 Msa0815180:intron 55.0%
GACGATCTCCGAGGCAGTGA+TGG + chr5_3:48186202-48186221 None:intergenic 60.0%
TCGGAGATCGTCTCCACCGT+CGG - chr5_3:48186210-48186229 Msa0815180:three_prime_UTR 60.0%
CACGCCCAGCTACAACTGTG+CGG + chr5_3:48188091-48188110 None:intergenic 60.0%
TGTGGCCGAGGTTTGAACCC+CGG - chr5_3:48189315-48189334 Msa0815180:CDS 60.0%
GAGGTTTGAACCCCGGACCT+TGG - chr5_3:48189322-48189341 Msa0815180:CDS 60.0%
GACGGTGGAGACGATCTCCG+AGG + chr5_3:48186211-48186230 None:intergenic 65.0%
CACGGGCCCGTGCTTCGCAT+GGG + chr5_3:48190606-48190625 None:intergenic 70.0%
GCACGGGCCCGTGCTTAGCA+CGG - chr5_3:48190613-48190632 Msa0815180:intron 70.0%
CACGGGCCCGTGCTTAGCAC+GGG - chr5_3:48190614-48190633 Msa0815180:intron 70.0%
GCACGGGCCCGTGCTTCGCA+TGG + chr5_3:48190607-48190626 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 48186149 48197438 48186149 ID=Msa0815180;Name=Msa0815180
chr5_3 mRNA 48186149 48197438 48186149 ID=Msa0815180-mRNA-1;Parent=Msa0815180;Name=Msa0815180-mRNA-1;_AED=0.08;_eAED=0.08;_QI=125|1|1|1|0.83|0.85|7|638|927
chr5_3 exon 48186149 48187024 48186149 ID=Msa0815180-mRNA-1:exon:14599;Parent=Msa0815180-mRNA-1
chr5_3 exon 48187109 48187367 48187109 ID=Msa0815180-mRNA-1:exon:14598;Parent=Msa0815180-mRNA-1
chr5_3 exon 48187739 48188063 48187739 ID=Msa0815180-mRNA-1:exon:14597;Parent=Msa0815180-mRNA-1
chr5_3 exon 48188735 48190024 48188735 ID=Msa0815180-mRNA-1:exon:14596;Parent=Msa0815180-mRNA-1
chr5_3 exon 48191143 48191700 48191143 ID=Msa0815180-mRNA-1:exon:14595;Parent=Msa0815180-mRNA-1
chr5_3 exon 48192404 48192559 48192404 ID=Msa0815180-mRNA-1:exon:14594;Parent=Msa0815180-mRNA-1
chr5_3 exon 48197356 48197438 48197356 ID=Msa0815180-mRNA-1:exon:14593;Parent=Msa0815180-mRNA-1
chr5_3 five_prime_UTR 48197356 48197438 48197356 ID=Msa0815180-mRNA-1:five_prime_utr;Parent=Msa0815180-mRNA-1
chr5_3 five_prime_UTR 48192518 48192559 48192518 ID=Msa0815180-mRNA-1:five_prime_utr;Parent=Msa0815180-mRNA-1
chr5_3 CDS 48192404 48192517 48192404 ID=Msa0815180-mRNA-1:cds;Parent=Msa0815180-mRNA-1
chr5_3 CDS 48191143 48191700 48191143 ID=Msa0815180-mRNA-1:cds;Parent=Msa0815180-mRNA-1
chr5_3 CDS 48188735 48190024 48188735 ID=Msa0815180-mRNA-1:cds;Parent=Msa0815180-mRNA-1
chr5_3 CDS 48187739 48188063 48187739 ID=Msa0815180-mRNA-1:cds;Parent=Msa0815180-mRNA-1
chr5_3 CDS 48187109 48187367 48187109 ID=Msa0815180-mRNA-1:cds;Parent=Msa0815180-mRNA-1
chr5_3 CDS 48186787 48187024 48186787 ID=Msa0815180-mRNA-1:cds;Parent=Msa0815180-mRNA-1
chr5_3 three_prime_UTR 48186149 48186786 48186149 ID=Msa0815180-mRNA-1:three_prime_utr;Parent=Msa0815180-mRNA-1
Gene Sequence

>Msa0815180

ATGGAGAAGAGATGTAATACCATTGAGGAATGTCTTCATGGTGCAAGCTTAATAGATATTGTATTCTCTTGGACTATAGAGGATCTTCTCAATGAAAATCTTTTCAAACACCAGGTACCGAAGATTCCAAAGACATTCTTGTCAACAAATGATTACATGAAGTCATTCTTTCCGGCATTGATAGAGGAAACACATTTTGATCTACATTCAAGCTTGTTGAGTGTGAATCAAGCTTCTCTTTGCGAAATCAGGACAATCGAAATGCCCAACTACTTCCACCCTCCAAATGACCTGTTCTATCAAATTACAGTGAAGAATATTACTGATGAGGTGTACGGGGTAGGAAAATATGAACCTGAAGTCGGTGATCTTATTGCATTCACAACTATTCGACCAAAAAGTGTGTATGACTTGAGCAGGATAAAAAACTACTGTCATATAGGTTATATTTATGGATCAAAAGATGAATTTACTGATGAGATTCCTATAGTCTTGTCAAAGTACTTGGAGATTCATGATAAATTTGACTTGAGGACGAACAAAGCTCAGAAACTCTATGCAGTTGAACTCATCAACTTGACCACAAATGTTCGTATTTGGAAAGCCTTGAACTCAGAGATGGAAGGATCTAACATGAATATAATTAAAAAAGTGTTGCAGCCTTATTCAAGGATGGAACAAAACTGTCATACTTGCTTATCAGAAGAAAATCTCGGGCTATCCTATTCTCCAGTGACAAACATAGTCAAATCTCAGAATCTAAACGAATCGCAAGAAAATGCTGTTCTAAGCTGTCTTCGTATGAAGAAATTTCCTCACAATGATCCTATTAAACTCATATGGGGTCCACCAGGAACTGGAAAAACAAAAACAGTTGCTTCAATGCTCTTTTGTCTCCTGAAGTTAAGAATCAGAACACTGACATGTGCTCCAACAAATACTGCAGTGTTGGCGGTGGCGTCACGCTTTCATCACATAGCTAAGGATTCACTTGAACATGGTTCATATGGTCTTGGTGACATAGTTCTATTTGGAAATAGCAAAAGAATGAAAATTGATTCTTATAAAGGTCTTGGTGAAGTGTTTTTGGAGAATAGAGTTGATGATTTGCTATACTGTTTTTTACCAATGACAGGGTGGAAAAGTAGTTTGGAATCAATGATCAAATTACTTAAGTATCCCGAAGAGCAATATGATATGTATAACAATGATGTGAATAATGATGTTGTTATGTCATTCGAAGAATTTGTTAATGAGAGTTATAGTCATGTGAAAGGTTCATATTTTTCATACAAGAAACGGTGTAGGTACCATTGTCCTGTGGCATTGGAGGAGTTTGTGAAGAAGAAATATGGCTATATTTTAGAGCAATATGATATATACCAAGATGATAAAAAGTTAAGTGTTGGGATGAGTATGGAACAGTTTTTAAGACAAAGGTTCTTTTTCTTTGGAGGGAAATTGAAATCATTCATGAAAACTCTGTGTACTCATTTACCAACATGTTTCCTTTCAATTGAGGTGGTGATGAAAATATTTAGAGTTCTTGGGTTGCTAAAATCTCTTGAAGTTTCCATGAGTCAAACCAAACGCCAACAAGCTTTCCATGATGATTGTGAAAATCAACCAAGAGTTTTTGCTTTGCTTGGATGGTTAAACTTAGAAAAAGAAGAGTTACTTCACACTCTTTGTTTTCTTTCTGAGACTATCGAGCTTCCTCAATTTACAACAAAATATGGAATATCACAATTTTGCTTAGAGAATGCGCGCAGTCTTCTTTGTACTGCATCAAGTTCTTCTAAATTGTACACAAATGGAATGAAACAAGTGCAGTTTTTAGTGGTTGATGAAGCTGCTCAACTTAAAGAATGTGAATCAGCTATTCCATTGCAACTACCTGGCCTCAAACGTTGTATCTTGATTGGTGATGAGAGACAACTTCCAGCAATGGTCAAAAGCAAGATAGCTGACAGGGCTGAATATGGAAGAAGCTTATTTGAAAGATTAGTACTGTTGGGATACAAGAAGCATATGCTTGATGTTCAATATAGAATGCATCCATCCATAAGCATGTTTCCAAGTAAAGAATTCTATGATGGTCAACTTTCTGATGCCAACATTGTAAGAGAAATAAGCTATAACAAGCATTTCCTGGGAGGAAAGATGTTTGGTTCATACTCTTTCATTAACATATCTAAGGGTAAAGAGCAGTGTAATCATGATCATAGTTTGAAGAATGTGATTGAAGCTGCTGCTATCTCTGAGATTACTGGAAGACTTAAAAAGGCAGAATTTGGAAAGACAAGGAATAAAGTCAGCATAGGGATCATATCACCATACAAGGCACAAGTTCATGAAATCCAAGAGAAAGTGAAGCAGTACATGGTTTCGGATCCTAACTTTTCAGTTAATGTTCGTTCTGTTGATGGCTTTCAAGGTGGCGAAGAAGATATTATAATAATATCTACTGTTAGATCAAATTTGGGTGGAAAAGTTGGTTTTCTTTCCAATAGACAAAGAGCTAATGTTGCTATCACTAGGGCTAGATATTGTCTTTGGATTGTAGGAAATGCTACAACCTTAGTTAATAGTAACTCTGTGTGGAGAAAGGTTGTTCTTGATGCTATGGAGAGATATTGTTTCCATAATGCTGATGAGGACAAGAAATTGGATCAAGCTATTGAGGATGCATGCTTTGAGTTTGAACTACTAGATGATTCTGCTTCAGCATTTAATAAACTAAGCATAAGGGACATGTCAGAAACATCTACTTTCTCTAGGTGA
Protein sequence

>Msa0815180

MEKRCNTIEECLHGASLIDIVFSWTIEDLLNENLFKHQVPKIPKTFLSTNDYMKSFFPALIEETHFDLHSSLLSVNQASLCEIRTIEMPNYFHPPNDLFYQITVKNITDEVYGVGKYEPEVGDLIAFTTIRPKSVYDLSRIKNYCHIGYIYGSKDEFTDEIPIVLSKYLEIHDKFDLRTNKAQKLYAVELINLTTNVRIWKALNSEMEGSNMNIIKKVLQPYSRMEQNCHTCLSEENLGLSYSPVTNIVKSQNLNESQENAVLSCLRMKKFPHNDPIKLIWGPPGTGKTKTVASMLFCLLKLRIRTLTCAPTNTAVLAVASRFHHIAKDSLEHGSYGLGDIVLFGNSKRMKIDSYKGLGEVFLENRVDDLLYCFLPMTGWKSSLESMIKLLKYPEEQYDMYNNDVNNDVVMSFEEFVNESYSHVKGSYFSYKKRCRYHCPVALEEFVKKKYGYILEQYDIYQDDKKLSVGMSMEQFLRQRFFFFGGKLKSFMKTLCTHLPTCFLSIEVVMKIFRVLGLLKSLEVSMSQTKRQQAFHDDCENQPRVFALLGWLNLEKEELLHTLCFLSETIELPQFTTKYGISQFCLENARSLLCTASSSSKLYTNGMKQVQFLVVDEAAQLKECESAIPLQLPGLKRCILIGDERQLPAMVKSKIADRAEYGRSLFERLVLLGYKKHMLDVQYRMHPSISMFPSKEFYDGQLSDANIVREISYNKHFLGGKMFGSYSFINISKGKEQCNHDHSLKNVIEAAAISEITGRLKKAEFGKTRNKVSIGIISPYKAQVHEIQEKVKQYMVSDPNFSVNVRSVDGFQGGEEDIIIISTVRSNLGGKVGFLSNRQRANVAITRARYCLWIVGNATTLVNSNSVWRKVVLDAMERYCFHNADEDKKLDQAIEDACFEFELLDDSASAFNKLSIRDMSETSTFSR*