Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838350 | XP_004516365.1 | 89.172 | 471 | 50 | 1 | 3 | 473 | 103 | 572 | 0.0 | 868 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838350 | sp|O22212|PRP4L_ARATH | 63.617 | 470 | 159 | 6 | 11 | 473 | 89 | 553 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838350 | A0A1S2Z7D8 | 89.172 | 471 | 50 | 1 | 3 | 473 | 103 | 572 | 0.0 | 868 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001000 | Msa0838350 | 0.819622 | 1.054276e-52 | -8.615850e-47 |
| Msa0091830 | Msa0838350 | 0.991436 | 1.215857e-187 | -8.615850e-47 |
| Msa0656270 | Msa0838350 | 0.802475 | 5.511828e-49 | -8.615850e-47 |
| Msa0700070 | Msa0838350 | 0.811966 | 5.373848e-51 | -8.615850e-47 |
| Msa0750380 | Msa0838350 | 0.805710 | 1.170629e-49 | -8.615850e-47 |
| Msa0800350 | Msa0838350 | 0.821454 | 4.002598e-53 | -8.615850e-47 |
| Msa0830720 | Msa0838350 | 0.800819 | 1.205229e-48 | -8.615850e-47 |
| Msa0838350 | Msa1252070 | 0.816538 | 5.253013e-52 | -8.615850e-47 |
| Msa0838350 | Msa1292730 | 0.821331 | 4.273249e-53 | -8.615850e-47 |
| Msa0164360 | Msa0838350 | 0.800005 | 1.765399e-48 | -8.615850e-47 |
| Msa0243470 | Msa0838350 | 0.803581 | 3.255827e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838350 | MtrunA17_Chr3g0093681 | 89.172 | 471 | 51 | 0 | 3 | 473 | 95 | 565 | 0.0 | 849 |
| Msa0838350 | MtrunA17_Chr1g0172501 | 88.960 | 471 | 52 | 0 | 3 | 473 | 95 | 565 | 0.0 | 847 |
| Msa0838350 | MtrunA17_Chr5g0405851 | 89.610 | 462 | 33 | 1 | 27 | 473 | 1 | 462 | 0.0 | 789 |
| Msa0838350 | MtrunA17_Chr1g0185501 | 33.992 | 253 | 152 | 6 | 217 | 460 | 22 | 268 | 3.30e-35 | 133 |
| Msa0838350 | MtrunA17_Chr1g0185501 | 27.273 | 286 | 200 | 6 | 182 | 460 | 28 | 312 | 6.32e-30 | 119 |
| Msa0838350 | MtrunA17_Chr4g0067151 | 32.171 | 258 | 159 | 6 | 217 | 460 | 22 | 277 | 3.98e-34 | 130 |
| Msa0838350 | MtrunA17_Chr4g0067151 | 28.763 | 299 | 197 | 6 | 178 | 461 | 25 | 322 | 1.08e-33 | 129 |
| Msa0838350 | MtrunA17_Chr4g0067151 | 29.032 | 217 | 143 | 3 | 255 | 461 | 18 | 233 | 4.64e-26 | 108 |
| Msa0838350 | MtrunA17_Chr3g0136971 | 31.356 | 236 | 144 | 3 | 187 | 405 | 426 | 660 | 3.98e-29 | 120 |
| Msa0838350 | MtrunA17_Chr3g0136971 | 28.986 | 207 | 144 | 3 | 213 | 418 | 410 | 614 | 4.82e-27 | 114 |
| Msa0838350 | MtrunA17_Chr3g0136971 | 28.358 | 201 | 143 | 1 | 260 | 460 | 415 | 614 | 1.01e-23 | 104 |
| Msa0838350 | MtrunA17_Chr3g0136971 | 26.250 | 160 | 117 | 1 | 301 | 460 | 414 | 572 | 6.15e-17 | 83.6 |
| Msa0838350 | MtrunA17_Chr3g0136971 | 27.273 | 176 | 99 | 2 | 313 | 460 | 356 | 530 | 9.43e-16 | 80.1 |
| Msa0838350 | MtrunA17_Chr5g0401661 | 26.129 | 310 | 202 | 5 | 178 | 461 | 333 | 641 | 2.28e-26 | 112 |
| Msa0838350 | MtrunA17_Chr5g0401661 | 24.519 | 208 | 145 | 3 | 188 | 385 | 445 | 650 | 9.62e-15 | 77.0 |
| Msa0838350 | MtrunA17_Chr5g0401661 | 24.434 | 221 | 145 | 4 | 260 | 461 | 331 | 548 | 1.11e-12 | 70.5 |
| Msa0838350 | MtrunA17_Chr5g0401661 | 26.131 | 199 | 135 | 4 | 190 | 378 | 488 | 684 | 1.74e-12 | 69.7 |
| Msa0838350 | MtrunA17_Chr2g0295791 | 28.906 | 256 | 177 | 5 | 206 | 460 | 155 | 406 | 3.89e-26 | 110 |
| Msa0838350 | MtrunA17_Chr2g0295791 | 23.774 | 265 | 190 | 7 | 205 | 460 | 195 | 456 | 3.65e-16 | 80.9 |
| Msa0838350 | MtrunA17_Chr1g0171711 | 27.609 | 297 | 199 | 10 | 172 | 460 | 497 | 785 | 8.88e-26 | 111 |
| Msa0838350 | MtrunA17_Chr5g0401671 | 25.649 | 308 | 204 | 5 | 178 | 461 | 245 | 551 | 1.26e-25 | 110 |
| Msa0838350 | MtrunA17_Chr5g0401671 | 29.870 | 154 | 98 | 4 | 192 | 336 | 442 | 594 | 6.47e-16 | 80.5 |
| Msa0838350 | MtrunA17_Chr5g0401671 | 24.074 | 216 | 152 | 3 | 188 | 393 | 355 | 568 | 1.41e-15 | 79.3 |
| Msa0838350 | MtrunA17_Chr5g0401671 | 25.207 | 242 | 156 | 6 | 238 | 461 | 224 | 458 | 4.33e-14 | 74.7 |
| Msa0838350 | MtrunA17_Chr5g0401671 | 27.586 | 174 | 114 | 4 | 215 | 378 | 423 | 594 | 1.76e-11 | 66.2 |
| Msa0838350 | MtrunA17_Chr4g0053651 | 26.861 | 309 | 199 | 7 | 178 | 461 | 228 | 534 | 2.57e-25 | 109 |
| Msa0838350 | MtrunA17_Chr4g0053651 | 29.197 | 137 | 88 | 1 | 258 | 385 | 407 | 543 | 1.17e-15 | 79.3 |
| Msa0838350 | MtrunA17_Chr4g0053651 | 24.658 | 219 | 145 | 4 | 260 | 461 | 226 | 441 | 1.64e-11 | 66.6 |
| Msa0838350 | MtrunA17_Chr4g0053651 | 27.907 | 172 | 112 | 4 | 217 | 378 | 408 | 577 | 4.38e-11 | 65.1 |
| Msa0838350 | MtrunA17_Chr1g0148791 | 28.094 | 299 | 198 | 10 | 172 | 460 | 610 | 901 | 1.32e-24 | 107 |
| Msa0838350 | MtrunA17_Chr1g0168391 | 25.722 | 381 | 247 | 12 | 91 | 460 | 156 | 511 | 2.22e-24 | 105 |
| Msa0838350 | MtrunA17_Chr6g0448921 | 26.506 | 249 | 180 | 3 | 214 | 461 | 8 | 254 | 7.34e-24 | 105 |
| Msa0838350 | MtrunA17_Chr6g0448921 | 25.234 | 214 | 154 | 3 | 192 | 400 | 25 | 237 | 1.04e-20 | 95.5 |
| Msa0838350 | MtrunA17_Chr6g0448921 | 28.902 | 173 | 121 | 2 | 195 | 366 | 74 | 245 | 2.69e-17 | 85.1 |
| Msa0838350 | MtrunA17_Chr3g0138311 | 26.498 | 317 | 212 | 10 | 151 | 460 | 594 | 896 | 1.43e-23 | 104 |
| Msa0838350 | MtrunA17_Chr4g0062881 | 28.070 | 285 | 189 | 9 | 182 | 460 | 182 | 456 | 4.80e-23 | 101 |
| Msa0838350 | MtrunA17_Chr4g0070791 | 30.252 | 238 | 151 | 3 | 238 | 460 | 33 | 270 | 5.52e-23 | 99.4 |
| Msa0838350 | MtrunA17_Chr4g0070791 | 25.000 | 284 | 189 | 7 | 199 | 460 | 37 | 318 | 2.67e-14 | 73.9 |
| Msa0838350 | MtrunA17_Chr4g0070791 | 28.169 | 142 | 101 | 1 | 178 | 318 | 156 | 297 | 2.90e-11 | 64.7 |
| Msa0838350 | MtrunA17_Chr7g0237241 | 24.742 | 291 | 209 | 7 | 173 | 460 | 491 | 774 | 5.69e-23 | 102 |
| Msa0838350 | MtrunA17_Chr7g0237271 | 24.399 | 291 | 210 | 7 | 173 | 460 | 500 | 783 | 8.09e-23 | 102 |
| Msa0838350 | MtrunA17_Chr1g0200901 | 26.545 | 275 | 194 | 5 | 188 | 459 | 131 | 400 | 4.07e-22 | 98.2 |
| Msa0838350 | MtrunA17_Chr1g0200901 | 26.054 | 261 | 179 | 8 | 206 | 460 | 107 | 359 | 1.99e-16 | 81.3 |
| Msa0838350 | MtrunA17_Chr1g0200901 | 25.100 | 251 | 179 | 7 | 215 | 460 | 73 | 319 | 4.96e-15 | 77.0 |
| Msa0838350 | MtrunA17_Chr1g0200901 | 26.047 | 215 | 151 | 6 | 168 | 378 | 194 | 404 | 3.39e-11 | 65.1 |
| Msa0838350 | MtrunA17_Chr2g0281451 | 28.000 | 250 | 175 | 5 | 214 | 461 | 7 | 253 | 1.26e-21 | 98.6 |
| Msa0838350 | MtrunA17_Chr2g0281451 | 26.316 | 209 | 149 | 3 | 162 | 369 | 43 | 247 | 8.23e-17 | 83.6 |
| Msa0838350 | MtrunA17_Chr1g0176241 | 26.510 | 298 | 166 | 11 | 216 | 467 | 113 | 403 | 3.54e-21 | 96.3 |
| Msa0838350 | MtrunA17_Chr1g0176241 | 25.316 | 316 | 192 | 8 | 187 | 460 | 168 | 481 | 9.88e-17 | 82.4 |
| Msa0838350 | MtrunA17_Chr1g0176241 | 26.316 | 266 | 154 | 7 | 193 | 420 | 222 | 483 | 2.95e-16 | 80.9 |
| Msa0838350 | MtrunA17_Chr7g0253861 | 26.923 | 208 | 148 | 4 | 255 | 460 | 46 | 251 | 5.87e-21 | 94.0 |
| Msa0838350 | MtrunA17_Chr7g0253861 | 21.549 | 297 | 179 | 7 | 215 | 459 | 48 | 342 | 1.29e-12 | 68.9 |
| Msa0838350 | MtrunA17_Chr8g0352821 | 24.188 | 277 | 205 | 4 | 188 | 461 | 191 | 465 | 1.69e-20 | 94.7 |
| Msa0838350 | MtrunA17_Chr8g0352821 | 20.419 | 191 | 151 | 1 | 270 | 460 | 189 | 378 | 2.18e-11 | 66.2 |
| Msa0838350 | MtrunA17_Chr3g0144511 | 26.421 | 299 | 188 | 11 | 193 | 463 | 78 | 372 | 8.60e-20 | 90.9 |
| Msa0838350 | MtrunA17_Chr1g0194721 | 30.045 | 223 | 120 | 4 | 257 | 443 | 235 | 457 | 1.25e-19 | 92.8 |
| Msa0838350 | MtrunA17_Chr2g0331981 | 28.019 | 207 | 144 | 4 | 257 | 459 | 92 | 297 | 1.52e-19 | 92.0 |
| Msa0838350 | MtrunA17_Chr2g0331981 | 27.059 | 255 | 180 | 6 | 222 | 471 | 15 | 268 | 2.15e-18 | 88.6 |
| Msa0838350 | MtrunA17_Chr2g0331981 | 26.708 | 161 | 113 | 3 | 218 | 374 | 138 | 297 | 1.67e-11 | 66.6 |
| Msa0838350 | MtrunA17_Chr4g0004241 | 28.218 | 202 | 139 | 5 | 257 | 454 | 92 | 291 | 2.49e-19 | 91.3 |
| Msa0838350 | MtrunA17_Chr4g0004241 | 27.451 | 255 | 179 | 6 | 222 | 471 | 15 | 268 | 6.18e-19 | 90.1 |
| Msa0838350 | MtrunA17_Chr4g0004241 | 26.708 | 161 | 113 | 3 | 218 | 374 | 138 | 297 | 1.35e-11 | 67.0 |
| Msa0838350 | MtrunA17_Chr2g0294611 | 30.594 | 219 | 118 | 6 | 257 | 443 | 237 | 453 | 4.49e-19 | 90.9 |
| Msa0838350 | MtrunA17_Chr7g0266251 | 27.113 | 284 | 171 | 10 | 211 | 459 | 5 | 287 | 5.20e-19 | 88.2 |
| Msa0838350 | MtrunA17_Chr7g0266251 | 30.370 | 135 | 80 | 4 | 339 | 460 | 7 | 140 | 2.58e-12 | 68.2 |
| Msa0838350 | MtrunA17_Chr7g0266251 | 24.535 | 269 | 164 | 10 | 186 | 418 | 75 | 340 | 4.36e-12 | 67.4 |
| Msa0838350 | MtrunA17_Chr2g0331961 | 26.199 | 271 | 177 | 10 | 188 | 439 | 13 | 279 | 6.71e-19 | 87.4 |
| Msa0838350 | MtrunA17_Chr2g0331961 | 26.941 | 219 | 156 | 4 | 246 | 460 | 40 | 258 | 1.76e-17 | 83.2 |
| Msa0838350 | MtrunA17_Chr2g0331961 | 26.027 | 219 | 145 | 7 | 205 | 408 | 84 | 300 | 6.34e-14 | 72.8 |
| Msa0838350 | MtrunA17_Chr2g0331961 | 25.287 | 174 | 117 | 3 | 217 | 377 | 139 | 312 | 7.85e-12 | 66.2 |
| Msa0838350 | MtrunA17_Chr2g0284241 | 25.000 | 280 | 152 | 6 | 238 | 461 | 23 | 300 | 8.62e-19 | 87.4 |
| Msa0838350 | MtrunA17_Chr2g0284241 | 31.944 | 144 | 86 | 4 | 191 | 323 | 188 | 330 | 1.34e-12 | 68.9 |
| Msa0838350 | MtrunA17_Chr2g0284241 | 23.504 | 234 | 161 | 6 | 213 | 432 | 84 | 313 | 8.41e-11 | 63.2 |
| Msa0838350 | MtrunA17_Chr2g0285951 | 25.792 | 221 | 141 | 5 | 263 | 460 | 29 | 249 | 1.53e-18 | 85.5 |
| Msa0838350 | MtrunA17_Chr2g0285951 | 22.271 | 229 | 147 | 5 | 221 | 422 | 29 | 253 | 2.15e-11 | 64.3 |
| Msa0838350 | MtrunA17_Chr4g0059031 | 30.539 | 167 | 112 | 3 | 211 | 375 | 489 | 653 | 2.46e-18 | 88.2 |
| Msa0838350 | MtrunA17_Chr4g0059031 | 24.723 | 271 | 189 | 6 | 204 | 460 | 384 | 653 | 3.23e-17 | 84.7 |
| Msa0838350 | MtrunA17_Chr4g0059031 | 30.723 | 166 | 107 | 3 | 303 | 460 | 57 | 222 | 1.60e-14 | 76.3 |
| Msa0838350 | MtrunA17_Chr4g0059031 | 23.643 | 258 | 164 | 5 | 236 | 462 | 32 | 287 | 2.10e-14 | 75.9 |
| Msa0838350 | MtrunA17_Chr4g0059031 | 24.000 | 325 | 199 | 11 | 167 | 444 | 47 | 370 | 6.75e-13 | 71.2 |
| Msa0838350 | MtrunA17_Chr8g0392701 | 31.507 | 219 | 138 | 6 | 253 | 460 | 3 | 220 | 2.31e-17 | 83.2 |
| Msa0838350 | MtrunA17_Chr8g0392701 | 26.699 | 206 | 142 | 6 | 218 | 418 | 59 | 260 | 1.56e-13 | 71.6 |
| Msa0838350 | MtrunA17_Chr4g0058091 | 23.744 | 219 | 156 | 2 | 183 | 390 | 268 | 486 | 1.49e-16 | 82.0 |
| Msa0838350 | MtrunA17_Chr2g0283891 | 25.926 | 270 | 185 | 9 | 163 | 418 | 41 | 309 | 1.87e-16 | 80.1 |
| Msa0838350 | MtrunA17_Chr7g0246741 | 28.333 | 240 | 167 | 5 | 198 | 434 | 345 | 582 | 2.00e-16 | 82.4 |
| Msa0838350 | MtrunA17_Chr7g0246741 | 26.829 | 205 | 142 | 4 | 187 | 386 | 376 | 577 | 4.60e-12 | 68.6 |
| Msa0838350 | MtrunA17_Chr7g0246741 | 25.862 | 174 | 124 | 3 | 290 | 460 | 353 | 524 | 1.67e-11 | 66.6 |
| Msa0838350 | MtrunA17_Chr1g0197551 | 22.909 | 275 | 182 | 4 | 215 | 460 | 2 | 275 | 2.30e-16 | 82.4 |
| Msa0838350 | MtrunA17_Chr1g0197551 | 22.845 | 232 | 151 | 2 | 256 | 460 | 1 | 231 | 3.28e-15 | 78.6 |
| Msa0838350 | MtrunA17_Chr1g0197551 | 25.466 | 161 | 119 | 1 | 303 | 463 | 6 | 165 | 8.55e-14 | 74.3 |
| Msa0838350 | MtrunA17_Chr8g0383711 | 22.662 | 278 | 162 | 7 | 188 | 418 | 26 | 297 | 1.07e-15 | 77.8 |
| Msa0838350 | MtrunA17_Chr8g0383711 | 24.390 | 205 | 148 | 3 | 257 | 459 | 11 | 210 | 5.59e-14 | 72.4 |
| Msa0838350 | MtrunA17_Chr4g0035611 | 24.576 | 236 | 148 | 4 | 254 | 460 | 41 | 275 | 1.33e-15 | 80.1 |
| Msa0838350 | MtrunA17_Chr4g0035611 | 23.276 | 232 | 150 | 2 | 256 | 460 | 1 | 231 | 1.65e-14 | 76.6 |
| Msa0838350 | MtrunA17_Chr4g0035611 | 25.466 | 161 | 119 | 1 | 303 | 463 | 6 | 165 | 2.79e-14 | 75.9 |
| Msa0838350 | MtrunA17_Chr2g0282401 | 25.271 | 277 | 194 | 9 | 188 | 460 | 520 | 787 | 1.71e-15 | 79.3 |
| Msa0838350 | MtrunA17_Chr2g0282401 | 28.866 | 194 | 130 | 6 | 272 | 463 | 520 | 707 | 3.06e-15 | 78.6 |
| Msa0838350 | MtrunA17_Chr8g0390861 | 25.882 | 255 | 177 | 7 | 191 | 440 | 880 | 1127 | 2.63e-15 | 79.0 |
| Msa0838350 | MtrunA17_Chr8g0390861 | 27.419 | 186 | 127 | 6 | 278 | 461 | 883 | 1062 | 1.23e-11 | 67.4 |
| Msa0838350 | MtrunA17_Chr4g0034491 | 27.734 | 256 | 166 | 11 | 220 | 467 | 16 | 260 | 3.63e-15 | 78.2 |
| Msa0838350 | MtrunA17_Chr4g0034491 | 26.991 | 226 | 148 | 10 | 195 | 419 | 83 | 292 | 1.04e-11 | 67.4 |
| Msa0838350 | MtrunA17_Chr3g0099061 | 30.769 | 156 | 98 | 4 | 314 | 460 | 222 | 376 | 1.23e-14 | 76.3 |
| Msa0838350 | MtrunA17_Chr3g0099061 | 25.000 | 276 | 178 | 9 | 219 | 472 | 214 | 482 | 7.31e-13 | 70.5 |
| Msa0838350 | MtrunA17_Chr4g0047091 | 24.675 | 308 | 191 | 11 | 172 | 460 | 80 | 365 | 3.50e-14 | 73.9 |
| Msa0838350 | MtrunA17_Chr2g0307941 | 28.169 | 213 | 137 | 5 | 183 | 383 | 65 | 273 | 5.78e-14 | 74.7 |
| Msa0838350 | MtrunA17_Chr2g0307941 | 26.923 | 208 | 139 | 6 | 221 | 418 | 61 | 265 | 2.11e-12 | 69.7 |
| Msa0838350 | MtrunA17_Chr7g0233651 | 26.389 | 288 | 181 | 13 | 195 | 461 | 136 | 413 | 6.16e-14 | 73.6 |
| Msa0838350 | MtrunA17_Chr2g0292301 | 30.688 | 189 | 106 | 6 | 292 | 460 | 137 | 320 | 9.61e-14 | 73.2 |
| Msa0838350 | MtrunA17_Chr4g0047051 | 25.000 | 284 | 162 | 11 | 180 | 418 | 30 | 307 | 3.94e-13 | 70.1 |
| Msa0838350 | MtrunA17_Chr1g0183051 | 22.727 | 264 | 194 | 6 | 162 | 418 | 243 | 503 | 8.39e-13 | 70.5 |
| Msa0838350 | MtrunA17_Chr3g0095501 | 27.778 | 180 | 122 | 5 | 299 | 473 | 263 | 439 | 1.22e-12 | 70.1 |
| Msa0838350 | MtrunA17_Chr4g0069701 | 25.116 | 215 | 149 | 3 | 257 | 460 | 480 | 693 | 1.57e-12 | 70.1 |
| Msa0838350 | MtrunA17_Chr4g0069701 | 27.426 | 237 | 157 | 6 | 237 | 462 | 32 | 264 | 6.03e-12 | 68.2 |
| Msa0838350 | MtrunA17_Chr4g0069701 | 27.160 | 162 | 115 | 2 | 219 | 379 | 62 | 221 | 2.45e-11 | 66.2 |
| Msa0838350 | MtrunA17_Chr4g0069701 | 22.615 | 283 | 191 | 9 | 208 | 468 | 341 | 617 | 4.17e-11 | 65.5 |
| Msa0838350 | MtrunA17_Chr7g0234591 | 25.229 | 218 | 138 | 7 | 237 | 441 | 132 | 337 | 2.78e-12 | 68.6 |
| Msa0838350 | MtrunA17_Chr4g0057141 | 24.335 | 263 | 172 | 9 | 215 | 460 | 347 | 599 | 5.04e-12 | 68.2 |
| Msa0838350 | MtrunA17_Chr1g0185891 | 24.335 | 263 | 172 | 9 | 215 | 460 | 286 | 538 | 5.05e-12 | 68.2 |
| Msa0838350 | MtrunA17_Chr5g0442391 | 27.320 | 194 | 132 | 6 | 272 | 461 | 232 | 420 | 6.58e-12 | 67.8 |
| Msa0838350 | MtrunA17_Chr7g0273631 | 26.923 | 130 | 95 | 0 | 253 | 382 | 207 | 336 | 7.04e-12 | 67.8 |
| Msa0838350 | MtrunA17_Chr7g0273631 | 29.592 | 98 | 69 | 0 | 303 | 400 | 215 | 312 | 1.75e-11 | 66.6 |
| Msa0838350 | MtrunA17_Chr3g0116561 | 25.253 | 198 | 141 | 5 | 260 | 454 | 221 | 414 | 8.52e-12 | 67.4 |
| Msa0838350 | MtrunA17_Chr3g0116561 | 22.348 | 264 | 198 | 4 | 203 | 461 | 248 | 509 | 7.84e-11 | 64.3 |
| Msa0838350 | MtrunA17_Chr4g0057131 | 26.033 | 242 | 171 | 6 | 237 | 473 | 223 | 461 | 1.70e-11 | 66.2 |
| Msa0838350 | MtrunA17_Chr7g0262491 | 24.242 | 264 | 157 | 9 | 218 | 440 | 149 | 410 | 2.08e-11 | 65.9 |
| Msa0838350 | MtrunA17_Chr2g0322171 | 27.854 | 219 | 135 | 6 | 178 | 378 | 8 | 221 | 2.50e-11 | 64.7 |
| Msa0838350 | MtrunA17_Chr2g0322171 | 28.431 | 204 | 114 | 7 | 186 | 367 | 58 | 251 | 3.77e-11 | 64.3 |
| Msa0838350 | MtrunA17_Chr2g0306791 | 28.019 | 207 | 134 | 7 | 262 | 460 | 14 | 213 | 3.48e-11 | 64.7 |
| Msa0838350 | MtrunA17_Chr8g0361561 | 25.641 | 234 | 144 | 8 | 202 | 415 | 100 | 323 | 3.86e-11 | 64.7 |
| Msa0838350 | MtrunA17_Chr3g0103361 | 26.190 | 210 | 143 | 5 | 258 | 460 | 13 | 217 | 4.46e-11 | 63.9 |
| Msa0838350 | MtrunA17_Chr5g0395821 | 23.704 | 270 | 151 | 7 | 251 | 467 | 166 | 433 | 4.87e-11 | 64.7 |
| Msa0838350 | MtrunA17_Chr4g0047061 | 24.277 | 173 | 122 | 5 | 293 | 463 | 83 | 248 | 5.87e-11 | 63.9 |
| Msa0838350 | MtrunA17_Chr8g0384161 | 28.000 | 175 | 110 | 4 | 265 | 424 | 14 | 187 | 6.32e-11 | 64.7 |
| Msa0838350 | MtrunA17_Chr6g0474101 | 23.166 | 259 | 144 | 8 | 250 | 460 | 134 | 385 | 6.59e-11 | 64.3 |
| Msa0838350 | MtrunA17_Chr1g0191191 | 31.818 | 88 | 60 | 0 | 303 | 390 | 214 | 301 | 9.81e-11 | 64.3 |
| Msa0838350 | MtrunA17_Chr1g0196201 | 22.368 | 228 | 162 | 5 | 240 | 460 | 22 | 241 | 9.84e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838350 | AT2G41500.1 | 63.617 | 470 | 159 | 6 | 11 | 473 | 89 | 553 | 0.0 | 618 |
| Msa0838350 | AT2G41500.2 | 63.617 | 470 | 159 | 6 | 11 | 473 | 89 | 553 | 0.0 | 618 |
| Msa0838350 | AT2G05720.1 | 36.585 | 328 | 145 | 4 | 119 | 444 | 2 | 268 | 1.73e-60 | 199 |
| Msa0838350 | AT2G05720.1 | 26.108 | 203 | 127 | 7 | 262 | 461 | 61 | 243 | 2.62e-12 | 67.8 |
| Msa0838350 | AT3G49660.1 | 31.449 | 283 | 184 | 5 | 188 | 461 | 32 | 313 | 2.09e-36 | 137 |
| Msa0838350 | AT3G49660.1 | 30.315 | 254 | 165 | 6 | 217 | 460 | 19 | 270 | 1.92e-31 | 123 |
| Msa0838350 | AT3G49660.1 | 30.488 | 164 | 108 | 2 | 305 | 463 | 23 | 185 | 2.16e-19 | 89.4 |
| Msa0838350 | AT3G49660.1 | 23.529 | 255 | 140 | 6 | 180 | 380 | 64 | 317 | 3.19e-16 | 80.1 |
| Msa0838350 | AT4G02730.1 | 31.102 | 254 | 167 | 6 | 213 | 460 | 34 | 285 | 2.19e-32 | 126 |
| Msa0838350 | AT4G02730.1 | 25.424 | 295 | 202 | 6 | 178 | 460 | 41 | 329 | 1.42e-25 | 107 |
| Msa0838350 | AT5G25150.1 | 32.114 | 246 | 149 | 3 | 177 | 405 | 415 | 659 | 2.86e-30 | 124 |
| Msa0838350 | AT5G25150.1 | 28.141 | 199 | 142 | 1 | 262 | 460 | 416 | 613 | 2.68e-25 | 109 |
| Msa0838350 | AT5G25150.1 | 27.326 | 172 | 100 | 2 | 313 | 460 | 359 | 529 | 1.18e-14 | 77.0 |
| Msa0838350 | AT5G25150.2 | 35.096 | 208 | 133 | 2 | 177 | 383 | 415 | 621 | 4.88e-30 | 124 |
| Msa0838350 | AT5G25150.2 | 28.141 | 199 | 142 | 1 | 262 | 460 | 416 | 613 | 2.75e-25 | 109 |
| Msa0838350 | AT5G25150.2 | 25.670 | 261 | 167 | 4 | 183 | 418 | 355 | 613 | 2.43e-24 | 107 |
| Msa0838350 | AT5G25150.2 | 27.326 | 172 | 100 | 2 | 313 | 460 | 359 | 529 | 1.24e-14 | 77.0 |
| Msa0838350 | AT2G33340.2 | 29.831 | 295 | 178 | 12 | 195 | 473 | 237 | 518 | 4.03e-28 | 117 |
| Msa0838350 | AT2G33340.1 | 29.831 | 295 | 178 | 12 | 195 | 473 | 237 | 518 | 4.03e-28 | 117 |
| Msa0838350 | AT5G67320.1 | 25.000 | 308 | 206 | 3 | 178 | 461 | 263 | 569 | 3.09e-27 | 115 |
| Msa0838350 | AT5G67320.1 | 22.420 | 281 | 188 | 7 | 139 | 393 | 310 | 586 | 7.17e-15 | 77.4 |
| Msa0838350 | AT5G67320.1 | 26.126 | 222 | 144 | 4 | 257 | 461 | 258 | 476 | 1.19e-14 | 77.0 |
| Msa0838350 | AT5G67320.1 | 27.136 | 199 | 133 | 4 | 190 | 378 | 416 | 612 | 1.26e-13 | 73.6 |
| Msa0838350 | AT4G15900.1 | 30.859 | 256 | 170 | 7 | 207 | 460 | 162 | 412 | 4.58e-27 | 114 |
| Msa0838350 | AT4G15900.1 | 24.151 | 265 | 189 | 6 | 205 | 460 | 201 | 462 | 1.47e-16 | 82.4 |
| Msa0838350 | AT4G32551.1 | 29.293 | 297 | 193 | 10 | 174 | 460 | 641 | 930 | 1.13e-26 | 114 |
| Msa0838350 | AT4G32551.2 | 29.097 | 299 | 195 | 10 | 172 | 460 | 677 | 968 | 1.32e-26 | 114 |
| Msa0838350 | AT2G33340.3 | 31.416 | 226 | 137 | 7 | 195 | 410 | 237 | 454 | 4.34e-26 | 111 |
| Msa0838350 | AT4G29830.1 | 31.513 | 238 | 148 | 4 | 238 | 460 | 33 | 270 | 1.22e-25 | 107 |
| Msa0838350 | AT4G29830.1 | 30.370 | 135 | 93 | 1 | 270 | 403 | 164 | 298 | 2.45e-11 | 65.1 |
| Msa0838350 | AT1G11160.2 | 29.577 | 213 | 146 | 1 | 192 | 400 | 24 | 236 | 2.18e-25 | 110 |
| Msa0838350 | AT1G11160.2 | 27.897 | 233 | 166 | 2 | 214 | 445 | 7 | 238 | 8.91e-23 | 102 |
| Msa0838350 | AT1G11160.2 | 30.108 | 186 | 129 | 1 | 275 | 460 | 27 | 211 | 2.41e-21 | 98.2 |
| Msa0838350 | AT1G11160.2 | 27.363 | 201 | 136 | 4 | 174 | 369 | 52 | 247 | 9.70e-17 | 84.0 |
| Msa0838350 | AT1G11160.2 | 28.221 | 163 | 113 | 3 | 301 | 460 | 8 | 169 | 5.38e-14 | 75.1 |
| Msa0838350 | AT1G11160.1 | 29.577 | 213 | 146 | 1 | 192 | 400 | 24 | 236 | 2.21e-25 | 110 |
| Msa0838350 | AT1G11160.1 | 27.897 | 233 | 166 | 2 | 214 | 445 | 7 | 238 | 8.30e-23 | 102 |
| Msa0838350 | AT1G11160.1 | 30.108 | 186 | 129 | 1 | 275 | 460 | 27 | 211 | 2.39e-21 | 98.2 |
| Msa0838350 | AT1G11160.1 | 27.363 | 201 | 136 | 4 | 174 | 369 | 52 | 247 | 9.71e-17 | 84.0 |
| Msa0838350 | AT1G11160.1 | 28.221 | 163 | 113 | 3 | 301 | 460 | 8 | 169 | 5.06e-14 | 75.1 |
| Msa0838350 | AT1G11160.4 | 29.577 | 213 | 146 | 1 | 192 | 400 | 24 | 236 | 2.28e-25 | 110 |
| Msa0838350 | AT1G11160.4 | 27.897 | 233 | 166 | 2 | 214 | 445 | 7 | 238 | 9.57e-23 | 102 |
| Msa0838350 | AT1G11160.4 | 30.108 | 186 | 129 | 1 | 275 | 460 | 27 | 211 | 2.37e-21 | 98.2 |
| Msa0838350 | AT1G11160.4 | 27.363 | 201 | 136 | 4 | 174 | 369 | 52 | 247 | 1.05e-16 | 83.6 |
| Msa0838350 | AT1G11160.4 | 28.221 | 163 | 113 | 3 | 301 | 460 | 8 | 169 | 5.34e-14 | 75.1 |
| Msa0838350 | AT1G61210.3 | 28.638 | 213 | 148 | 1 | 192 | 400 | 24 | 236 | 2.37e-25 | 110 |
| Msa0838350 | AT1G61210.3 | 26.506 | 249 | 180 | 3 | 214 | 461 | 7 | 253 | 1.19e-21 | 99.0 |
| Msa0838350 | AT1G61210.3 | 26.636 | 214 | 144 | 5 | 162 | 370 | 43 | 248 | 8.17e-16 | 80.9 |
| Msa0838350 | AT3G16650.1 | 29.811 | 265 | 178 | 6 | 207 | 470 | 156 | 413 | 2.87e-25 | 108 |
| Msa0838350 | AT3G16650.1 | 22.264 | 265 | 193 | 7 | 205 | 460 | 195 | 455 | 3.06e-12 | 68.9 |
| Msa0838350 | AT2G32700.2 | 26.282 | 312 | 208 | 11 | 163 | 460 | 483 | 786 | 3.78e-25 | 109 |
| Msa0838350 | AT2G32700.5 | 26.282 | 312 | 208 | 11 | 163 | 460 | 483 | 786 | 3.78e-25 | 109 |
| Msa0838350 | AT2G32700.1 | 26.282 | 312 | 208 | 11 | 163 | 460 | 483 | 786 | 3.78e-25 | 109 |
| Msa0838350 | AT2G32700.4 | 26.282 | 312 | 208 | 11 | 163 | 460 | 483 | 786 | 3.78e-25 | 109 |
| Msa0838350 | AT2G32700.3 | 26.282 | 312 | 208 | 11 | 163 | 460 | 483 | 786 | 3.78e-25 | 109 |
| Msa0838350 | AT2G32700.7 | 26.282 | 312 | 208 | 11 | 163 | 460 | 502 | 805 | 3.86e-25 | 109 |
| Msa0838350 | AT1G61210.2 | 28.638 | 213 | 148 | 1 | 192 | 400 | 24 | 236 | 4.18e-25 | 109 |
| Msa0838350 | AT1G61210.2 | 26.506 | 249 | 180 | 3 | 214 | 461 | 7 | 253 | 1.96e-21 | 98.6 |
| Msa0838350 | AT1G61210.2 | 26.636 | 214 | 144 | 5 | 162 | 370 | 43 | 248 | 1.19e-15 | 80.5 |
| Msa0838350 | AT2G32700.6 | 26.282 | 312 | 208 | 11 | 163 | 460 | 481 | 784 | 4.41e-25 | 109 |
| Msa0838350 | AT1G61210.1 | 28.638 | 213 | 148 | 1 | 192 | 400 | 24 | 236 | 4.49e-25 | 109 |
| Msa0838350 | AT1G61210.1 | 26.506 | 249 | 180 | 3 | 214 | 461 | 7 | 253 | 2.37e-21 | 98.2 |
| Msa0838350 | AT1G61210.1 | 26.636 | 214 | 144 | 5 | 162 | 370 | 43 | 248 | 1.35e-15 | 80.5 |
| Msa0838350 | AT1G48630.1 | 34.848 | 198 | 121 | 5 | 188 | 380 | 71 | 265 | 2.38e-23 | 100 |
| Msa0838350 | AT1G48630.1 | 31.217 | 189 | 120 | 4 | 281 | 460 | 33 | 220 | 1.44e-16 | 81.3 |
| Msa0838350 | AT1G48630.1 | 25.000 | 224 | 155 | 6 | 217 | 429 | 10 | 231 | 3.56e-14 | 73.9 |
| Msa0838350 | AT1G48630.1 | 25.446 | 224 | 142 | 7 | 177 | 377 | 102 | 323 | 6.29e-11 | 63.9 |
| Msa0838350 | AT3G18130.1 | 34.906 | 212 | 123 | 6 | 181 | 380 | 57 | 265 | 3.46e-23 | 100 |
| Msa0838350 | AT3G18130.1 | 30.688 | 189 | 121 | 4 | 281 | 460 | 33 | 220 | 1.88e-15 | 77.8 |
| Msa0838350 | AT3G18130.1 | 24.215 | 223 | 156 | 6 | 218 | 429 | 11 | 231 | 3.43e-13 | 70.9 |
| Msa0838350 | AT3G18130.1 | 25.728 | 206 | 144 | 6 | 218 | 418 | 59 | 260 | 6.50e-13 | 70.1 |
| Msa0838350 | AT1G11160.3 | 30.387 | 181 | 126 | 0 | 220 | 400 | 14 | 194 | 5.92e-23 | 103 |
| Msa0838350 | AT1G11160.3 | 30.319 | 188 | 130 | 1 | 258 | 445 | 10 | 196 | 6.90e-22 | 99.8 |
| Msa0838350 | AT1G11160.3 | 31.847 | 157 | 106 | 1 | 304 | 460 | 14 | 169 | 2.58e-19 | 92.0 |
| Msa0838350 | AT1G11160.3 | 27.500 | 200 | 135 | 4 | 175 | 369 | 11 | 205 | 8.64e-17 | 84.0 |
| Msa0838350 | AT1G11160.3 | 27.966 | 118 | 84 | 1 | 343 | 460 | 11 | 127 | 3.06e-11 | 66.6 |
| Msa0838350 | AT5G13480.2 | 24.407 | 295 | 213 | 5 | 186 | 472 | 135 | 427 | 1.17e-22 | 101 |
| Msa0838350 | AT5G13480.2 | 22.596 | 208 | 157 | 3 | 171 | 375 | 209 | 415 | 2.26e-11 | 66.6 |
| Msa0838350 | AT5G13480.4 | 24.407 | 295 | 213 | 5 | 186 | 472 | 112 | 404 | 1.22e-22 | 101 |
| Msa0838350 | AT5G13480.4 | 22.596 | 208 | 157 | 3 | 171 | 375 | 186 | 392 | 3.08e-11 | 66.2 |
| Msa0838350 | AT5G13480.1 | 24.407 | 295 | 213 | 5 | 186 | 472 | 124 | 416 | 1.24e-22 | 101 |
| Msa0838350 | AT5G13480.1 | 22.596 | 208 | 157 | 3 | 171 | 375 | 198 | 404 | 3.38e-11 | 65.9 |
| Msa0838350 | AT5G13480.3 | 24.407 | 295 | 213 | 5 | 186 | 472 | 112 | 404 | 1.51e-22 | 101 |
| Msa0838350 | AT5G13480.3 | 22.596 | 208 | 157 | 3 | 171 | 375 | 186 | 392 | 3.50e-11 | 65.9 |
| Msa0838350 | AT1G18080.1 | 33.803 | 213 | 125 | 6 | 181 | 380 | 57 | 266 | 3.02e-22 | 97.8 |
| Msa0838350 | AT1G18080.1 | 29.545 | 220 | 142 | 6 | 253 | 460 | 3 | 221 | 4.69e-15 | 76.6 |
| Msa0838350 | AT1G18080.1 | 26.087 | 207 | 143 | 6 | 218 | 418 | 59 | 261 | 3.75e-12 | 67.8 |
| Msa0838350 | AT5G08390.1 | 26.636 | 214 | 155 | 2 | 214 | 426 | 8 | 220 | 3.27e-22 | 100 |
| Msa0838350 | AT5G08390.1 | 27.749 | 191 | 132 | 3 | 192 | 377 | 25 | 214 | 7.32e-21 | 96.7 |
| Msa0838350 | AT5G08390.1 | 28.495 | 186 | 132 | 1 | 275 | 460 | 28 | 212 | 5.74e-20 | 93.6 |
| Msa0838350 | AT5G08390.1 | 26.012 | 173 | 126 | 2 | 195 | 366 | 74 | 245 | 1.19e-14 | 77.0 |
| Msa0838350 | AT5G08390.1 | 28.834 | 163 | 112 | 3 | 301 | 460 | 9 | 170 | 4.06e-13 | 72.4 |
| Msa0838350 | AT1G04510.1 | 28.058 | 278 | 182 | 9 | 195 | 460 | 237 | 508 | 1.08e-21 | 98.2 |
| Msa0838350 | AT1G71840.1 | 27.660 | 282 | 192 | 7 | 187 | 460 | 120 | 397 | 1.33e-21 | 97.1 |
| Msa0838350 | AT1G71840.1 | 25.604 | 207 | 149 | 3 | 257 | 459 | 63 | 268 | 2.51e-15 | 78.2 |
| Msa0838350 | AT1G71840.1 | 21.886 | 297 | 179 | 6 | 214 | 460 | 62 | 355 | 4.37e-13 | 71.2 |
| Msa0838350 | AT2G22040.1 | 29.907 | 214 | 139 | 4 | 257 | 461 | 77 | 288 | 1.47e-21 | 95.5 |
| Msa0838350 | AT2G22040.1 | 24.818 | 274 | 172 | 12 | 192 | 444 | 53 | 313 | 8.82e-12 | 66.6 |
| Msa0838350 | AT2G22040.1 | 28.889 | 135 | 88 | 2 | 191 | 317 | 179 | 313 | 3.50e-11 | 64.7 |
| Msa0838350 | AT1G04510.2 | 28.058 | 278 | 182 | 9 | 195 | 460 | 237 | 508 | 1.91e-21 | 97.4 |
| Msa0838350 | AT5G23430.3 | 26.636 | 214 | 155 | 2 | 214 | 426 | 8 | 220 | 1.97e-21 | 98.2 |
| Msa0838350 | AT5G23430.3 | 27.749 | 191 | 132 | 3 | 192 | 377 | 25 | 214 | 8.51e-21 | 96.3 |
| Msa0838350 | AT5G23430.3 | 29.032 | 186 | 131 | 1 | 275 | 460 | 28 | 212 | 1.15e-19 | 92.8 |
| Msa0838350 | AT5G23430.3 | 26.590 | 173 | 125 | 2 | 195 | 366 | 74 | 245 | 1.29e-14 | 77.0 |
| Msa0838350 | AT5G23430.3 | 28.221 | 163 | 113 | 3 | 301 | 460 | 9 | 170 | 8.46e-13 | 71.2 |
| Msa0838350 | AT5G23430.2 | 26.636 | 214 | 155 | 2 | 214 | 426 | 8 | 220 | 1.97e-21 | 98.2 |
| Msa0838350 | AT5G23430.2 | 27.749 | 191 | 132 | 3 | 192 | 377 | 25 | 214 | 8.51e-21 | 96.3 |
| Msa0838350 | AT5G23430.2 | 29.032 | 186 | 131 | 1 | 275 | 460 | 28 | 212 | 1.15e-19 | 92.8 |
| Msa0838350 | AT5G23430.2 | 26.590 | 173 | 125 | 2 | 195 | 366 | 74 | 245 | 1.29e-14 | 77.0 |
| Msa0838350 | AT5G23430.2 | 28.221 | 163 | 113 | 3 | 301 | 460 | 9 | 170 | 8.46e-13 | 71.2 |
| Msa0838350 | AT5G23430.1 | 26.636 | 214 | 155 | 2 | 214 | 426 | 8 | 220 | 2.06e-21 | 98.2 |
| Msa0838350 | AT5G23430.1 | 27.749 | 191 | 132 | 3 | 192 | 377 | 25 | 214 | 8.59e-21 | 96.3 |
| Msa0838350 | AT5G23430.1 | 29.032 | 186 | 131 | 1 | 275 | 460 | 28 | 212 | 1.15e-19 | 92.8 |
| Msa0838350 | AT5G23430.1 | 26.590 | 173 | 125 | 2 | 195 | 366 | 74 | 245 | 1.28e-14 | 77.0 |
| Msa0838350 | AT5G23430.1 | 28.221 | 163 | 113 | 3 | 301 | 460 | 9 | 170 | 8.32e-13 | 71.2 |
| Msa0838350 | AT3G15980.7 | 27.675 | 271 | 185 | 8 | 209 | 471 | 1 | 268 | 2.85e-20 | 94.7 |
| Msa0838350 | AT3G15980.7 | 29.082 | 196 | 128 | 5 | 257 | 448 | 92 | 280 | 1.34e-19 | 92.8 |
| Msa0838350 | AT3G15980.7 | 26.708 | 161 | 113 | 3 | 218 | 374 | 138 | 297 | 1.39e-11 | 67.4 |
| Msa0838350 | AT3G15980.1 | 27.675 | 271 | 185 | 8 | 209 | 471 | 1 | 268 | 2.92e-20 | 94.7 |
| Msa0838350 | AT3G15980.1 | 29.082 | 196 | 128 | 5 | 257 | 448 | 92 | 280 | 1.21e-19 | 92.8 |
| Msa0838350 | AT3G15980.1 | 26.708 | 161 | 113 | 3 | 218 | 374 | 138 | 297 | 1.25e-11 | 67.8 |
| Msa0838350 | AT5G52820.1 | 23.926 | 326 | 202 | 8 | 178 | 460 | 107 | 429 | 2.97e-20 | 93.6 |
| Msa0838350 | AT5G52820.1 | 32.105 | 190 | 117 | 4 | 258 | 439 | 103 | 288 | 1.57e-18 | 88.6 |
| Msa0838350 | AT5G52820.1 | 26.316 | 285 | 165 | 7 | 178 | 420 | 192 | 473 | 2.53e-17 | 84.7 |
| Msa0838350 | AT5G52820.1 | 24.528 | 318 | 192 | 10 | 187 | 460 | 158 | 471 | 2.53e-14 | 75.5 |
| Msa0838350 | AT3G15980.3 | 27.675 | 271 | 185 | 8 | 209 | 471 | 1 | 268 | 3.09e-20 | 94.7 |
| Msa0838350 | AT3G15980.3 | 29.082 | 196 | 128 | 5 | 257 | 448 | 92 | 280 | 1.20e-19 | 92.8 |
| Msa0838350 | AT3G15980.3 | 26.708 | 161 | 113 | 3 | 218 | 374 | 138 | 297 | 1.38e-11 | 67.4 |
| Msa0838350 | AT3G15980.6 | 27.675 | 271 | 185 | 8 | 209 | 471 | 1 | 268 | 3.09e-20 | 94.7 |
| Msa0838350 | AT3G15980.6 | 29.082 | 196 | 128 | 5 | 257 | 448 | 92 | 280 | 1.20e-19 | 92.8 |
| Msa0838350 | AT3G15980.6 | 26.708 | 161 | 113 | 3 | 218 | 374 | 138 | 297 | 1.38e-11 | 67.4 |
| Msa0838350 | AT3G15980.2 | 27.675 | 271 | 185 | 8 | 209 | 471 | 1 | 268 | 3.09e-20 | 94.7 |
| Msa0838350 | AT3G15980.2 | 29.082 | 196 | 128 | 5 | 257 | 448 | 92 | 280 | 1.20e-19 | 92.8 |
| Msa0838350 | AT3G15980.2 | 26.708 | 161 | 113 | 3 | 218 | 374 | 138 | 297 | 1.38e-11 | 67.4 |
| Msa0838350 | AT3G15980.4 | 27.675 | 271 | 185 | 8 | 209 | 471 | 1 | 268 | 3.09e-20 | 94.7 |
| Msa0838350 | AT3G15980.4 | 29.082 | 196 | 128 | 5 | 257 | 448 | 92 | 280 | 1.20e-19 | 92.8 |
| Msa0838350 | AT3G15980.4 | 26.708 | 161 | 113 | 3 | 218 | 374 | 138 | 297 | 1.38e-11 | 67.4 |
| Msa0838350 | AT3G15980.5 | 27.675 | 271 | 185 | 8 | 209 | 471 | 1 | 268 | 4.00e-20 | 94.4 |
| Msa0838350 | AT3G15980.5 | 29.082 | 196 | 128 | 5 | 257 | 448 | 92 | 280 | 1.47e-19 | 92.4 |
| Msa0838350 | AT3G15980.5 | 25.098 | 255 | 166 | 7 | 218 | 449 | 138 | 390 | 1.36e-12 | 70.9 |
| Msa0838350 | AT1G79990.1 | 29.787 | 188 | 125 | 5 | 257 | 439 | 92 | 277 | 5.89e-20 | 94.0 |
| Msa0838350 | AT1G79990.1 | 26.641 | 259 | 184 | 6 | 218 | 471 | 11 | 268 | 1.36e-18 | 89.7 |
| Msa0838350 | AT1G79990.1 | 26.136 | 176 | 124 | 4 | 205 | 375 | 82 | 256 | 3.17e-13 | 72.8 |
| Msa0838350 | AT1G79990.2 | 29.787 | 188 | 125 | 5 | 257 | 439 | 92 | 277 | 7.40e-20 | 93.6 |
| Msa0838350 | AT1G79990.2 | 26.641 | 259 | 184 | 6 | 218 | 471 | 11 | 268 | 1.57e-18 | 89.4 |
| Msa0838350 | AT1G79990.2 | 26.136 | 176 | 124 | 4 | 205 | 375 | 82 | 256 | 3.60e-13 | 72.4 |
| Msa0838350 | AT4G34460.4 | 25.253 | 297 | 193 | 9 | 193 | 463 | 73 | 366 | 8.30e-20 | 91.3 |
| Msa0838350 | AT4G34460.1 | 25.253 | 297 | 193 | 9 | 193 | 463 | 78 | 371 | 8.41e-20 | 91.3 |
| Msa0838350 | AT4G34460.2 | 25.253 | 297 | 193 | 9 | 193 | 463 | 16 | 309 | 8.99e-20 | 90.5 |
| Msa0838350 | AT1G52360.4 | 29.082 | 196 | 128 | 5 | 257 | 448 | 92 | 280 | 1.46e-19 | 92.4 |
| Msa0838350 | AT1G52360.4 | 27.059 | 255 | 180 | 6 | 222 | 471 | 15 | 268 | 9.64e-19 | 90.1 |
| Msa0838350 | AT1G52360.4 | 25.568 | 176 | 125 | 5 | 205 | 375 | 82 | 256 | 5.32e-13 | 72.0 |
| Msa0838350 | AT1G52360.4 | 27.329 | 161 | 112 | 3 | 218 | 374 | 138 | 297 | 4.22e-12 | 69.3 |
| Msa0838350 | AT1G52360.1 | 29.082 | 196 | 128 | 5 | 257 | 448 | 92 | 280 | 1.46e-19 | 92.4 |
| Msa0838350 | AT1G52360.1 | 27.059 | 255 | 180 | 6 | 222 | 471 | 15 | 268 | 9.64e-19 | 90.1 |
| Msa0838350 | AT1G52360.1 | 25.568 | 176 | 125 | 5 | 205 | 375 | 82 | 256 | 5.32e-13 | 72.0 |
| Msa0838350 | AT1G52360.1 | 27.329 | 161 | 112 | 3 | 218 | 374 | 138 | 297 | 4.22e-12 | 69.3 |
| Msa0838350 | AT1G52360.3 | 29.082 | 196 | 128 | 5 | 257 | 448 | 92 | 280 | 1.48e-19 | 92.4 |
| Msa0838350 | AT1G52360.3 | 27.059 | 255 | 180 | 6 | 222 | 471 | 15 | 268 | 9.20e-19 | 90.1 |
| Msa0838350 | AT1G52360.3 | 25.568 | 176 | 125 | 5 | 205 | 375 | 82 | 256 | 4.95e-13 | 72.0 |
| Msa0838350 | AT1G52360.3 | 27.329 | 161 | 112 | 3 | 218 | 374 | 138 | 297 | 3.60e-12 | 69.3 |
| Msa0838350 | AT1G52360.2 | 29.082 | 196 | 128 | 5 | 257 | 448 | 136 | 324 | 1.68e-19 | 92.4 |
| Msa0838350 | AT1G52360.2 | 27.059 | 255 | 180 | 6 | 222 | 471 | 59 | 312 | 9.43e-19 | 90.1 |
| Msa0838350 | AT1G52360.2 | 25.568 | 176 | 125 | 5 | 205 | 375 | 126 | 300 | 5.28e-13 | 72.0 |
| Msa0838350 | AT1G52360.2 | 27.329 | 161 | 112 | 3 | 218 | 374 | 182 | 341 | 4.18e-12 | 69.3 |
| Msa0838350 | AT2G47410.4 | 29.907 | 214 | 122 | 4 | 257 | 443 | 47 | 259 | 2.04e-19 | 92.4 |
| Msa0838350 | AT2G47410.1 | 29.907 | 214 | 122 | 4 | 257 | 443 | 229 | 441 | 2.42e-19 | 92.0 |
| Msa0838350 | AT2G26060.2 | 27.481 | 262 | 151 | 10 | 211 | 435 | 9 | 268 | 2.50e-19 | 89.4 |
| Msa0838350 | AT2G26060.2 | 29.665 | 209 | 125 | 7 | 195 | 382 | 42 | 249 | 3.77e-15 | 77.0 |
| Msa0838350 | AT2G26060.2 | 31.298 | 131 | 75 | 5 | 344 | 460 | 16 | 145 | 2.17e-12 | 68.6 |
| Msa0838350 | AT2G26060.1 | 27.481 | 262 | 151 | 10 | 211 | 435 | 9 | 268 | 2.58e-19 | 89.7 |
| Msa0838350 | AT2G26060.1 | 29.665 | 209 | 125 | 7 | 195 | 382 | 42 | 249 | 4.10e-15 | 77.0 |
| Msa0838350 | AT2G26060.1 | 24.354 | 271 | 163 | 11 | 186 | 418 | 80 | 346 | 3.30e-13 | 71.2 |
| Msa0838350 | AT2G26060.1 | 31.298 | 131 | 75 | 5 | 344 | 460 | 16 | 145 | 2.06e-12 | 68.9 |
| Msa0838350 | AT2G47410.2 | 29.907 | 214 | 122 | 4 | 257 | 443 | 228 | 440 | 2.60e-19 | 92.0 |
| Msa0838350 | AT2G43770.1 | 25.123 | 203 | 148 | 3 | 260 | 460 | 49 | 249 | 2.78e-19 | 89.4 |
| Msa0838350 | AT2G43770.1 | 23.232 | 297 | 174 | 6 | 215 | 459 | 46 | 340 | 9.82e-16 | 79.0 |
| Msa0838350 | AT3G18140.1 | 25.271 | 277 | 151 | 6 | 238 | 461 | 8 | 281 | 9.97e-19 | 87.0 |
| Msa0838350 | AT3G18140.1 | 30.075 | 133 | 84 | 3 | 191 | 315 | 173 | 304 | 5.93e-12 | 67.0 |
| Msa0838350 | AT3G18140.1 | 24.348 | 230 | 160 | 5 | 213 | 432 | 69 | 294 | 1.06e-11 | 66.2 |
| Msa0838350 | AT4G32990.1 | 27.338 | 278 | 153 | 12 | 212 | 459 | 10 | 268 | 1.67e-18 | 87.0 |
| Msa0838350 | AT4G32990.2 | 27.338 | 278 | 153 | 12 | 212 | 459 | 10 | 268 | 2.49e-18 | 85.5 |
| Msa0838350 | AT2G47410.6 | 28.571 | 224 | 122 | 4 | 257 | 443 | 47 | 269 | 3.46e-18 | 88.6 |
| Msa0838350 | AT2G47410.3 | 28.571 | 224 | 122 | 4 | 257 | 443 | 47 | 269 | 3.46e-18 | 88.6 |
| Msa0838350 | AT5G16750.1 | 30.332 | 211 | 138 | 6 | 189 | 392 | 28 | 236 | 4.51e-18 | 87.8 |
| Msa0838350 | AT5G16750.1 | 27.451 | 204 | 141 | 3 | 236 | 433 | 32 | 234 | 1.13e-16 | 83.6 |
| Msa0838350 | AT5G16750.1 | 28.022 | 182 | 119 | 3 | 205 | 375 | 472 | 652 | 2.63e-16 | 82.4 |
| Msa0838350 | AT5G16750.1 | 28.676 | 272 | 171 | 9 | 220 | 473 | 356 | 622 | 4.06e-16 | 81.6 |
| Msa0838350 | AT5G16750.1 | 25.283 | 265 | 183 | 6 | 217 | 467 | 396 | 659 | 3.75e-15 | 79.0 |
| Msa0838350 | AT5G16750.1 | 26.357 | 258 | 157 | 6 | 178 | 404 | 58 | 313 | 2.06e-14 | 76.3 |
| Msa0838350 | AT5G16750.1 | 28.221 | 163 | 112 | 2 | 303 | 460 | 57 | 219 | 8.11e-14 | 74.7 |
| Msa0838350 | AT5G16750.1 | 26.244 | 221 | 147 | 6 | 256 | 461 | 350 | 569 | 1.51e-13 | 73.6 |
| Msa0838350 | AT2G47410.5 | 28.571 | 224 | 122 | 4 | 257 | 443 | 229 | 451 | 4.59e-18 | 88.2 |
| Msa0838350 | AT2G21390.1 | 24.000 | 275 | 179 | 4 | 215 | 460 | 2 | 275 | 2.66e-17 | 85.9 |
| Msa0838350 | AT2G21390.1 | 24.138 | 232 | 148 | 2 | 256 | 460 | 1 | 231 | 2.99e-16 | 82.4 |
| Msa0838350 | AT2G21390.1 | 25.466 | 161 | 119 | 1 | 303 | 463 | 6 | 165 | 4.39e-14 | 75.5 |
| Msa0838350 | AT1G62020.1 | 23.273 | 275 | 181 | 4 | 215 | 460 | 2 | 275 | 2.37e-16 | 82.8 |
| Msa0838350 | AT1G62020.1 | 25.767 | 163 | 120 | 1 | 256 | 418 | 1 | 162 | 3.33e-15 | 79.0 |
| Msa0838350 | AT1G62020.1 | 24.299 | 214 | 127 | 6 | 205 | 386 | 76 | 286 | 3.72e-11 | 66.2 |
| Msa0838350 | AT5G56130.1 | 27.962 | 211 | 138 | 7 | 258 | 460 | 14 | 218 | 1.16e-15 | 78.2 |
| Msa0838350 | AT4G34460.3 | 25.000 | 248 | 161 | 8 | 193 | 418 | 78 | 322 | 2.16e-15 | 77.8 |
| Msa0838350 | AT4G34460.3 | 27.933 | 179 | 83 | 4 | 206 | 376 | 183 | 323 | 2.07e-12 | 68.9 |
| Msa0838350 | AT5G49430.2 | 33.600 | 125 | 80 | 1 | 257 | 378 | 238 | 362 | 2.35e-15 | 79.7 |
| Msa0838350 | AT5G49430.1 | 33.600 | 125 | 80 | 1 | 257 | 378 | 238 | 362 | 2.35e-15 | 79.7 |
| Msa0838350 | AT1G73720.1 | 31.875 | 160 | 100 | 3 | 314 | 465 | 221 | 379 | 7.53e-15 | 77.4 |
| Msa0838350 | AT1G73720.1 | 27.228 | 202 | 131 | 5 | 256 | 442 | 204 | 404 | 3.94e-13 | 72.0 |
| Msa0838350 | AT1G73720.1 | 25.256 | 293 | 195 | 8 | 188 | 460 | 221 | 509 | 1.10e-11 | 67.4 |
| Msa0838350 | AT1G73720.1 | 25.269 | 186 | 129 | 2 | 210 | 386 | 201 | 385 | 1.29e-11 | 67.0 |
| Msa0838350 | AT3G18860.1 | 26.016 | 246 | 158 | 9 | 234 | 467 | 30 | 263 | 1.41e-14 | 77.0 |
| Msa0838350 | AT3G18860.1 | 28.384 | 229 | 147 | 10 | 194 | 421 | 85 | 297 | 4.45e-14 | 75.1 |
| Msa0838350 | AT3G18860.2 | 26.016 | 246 | 158 | 9 | 234 | 467 | 30 | 263 | 1.46e-14 | 76.6 |
| Msa0838350 | AT3G18860.2 | 28.384 | 229 | 147 | 10 | 194 | 421 | 85 | 297 | 4.78e-14 | 75.1 |
| Msa0838350 | AT5G64730.1 | 22.993 | 274 | 166 | 7 | 188 | 418 | 26 | 297 | 2.07e-14 | 74.3 |
| Msa0838350 | AT5G64730.1 | 23.762 | 202 | 147 | 3 | 260 | 459 | 14 | 210 | 9.83e-12 | 66.2 |
| Msa0838350 | AT1G49040.1 | 28.509 | 228 | 154 | 6 | 238 | 462 | 870 | 1091 | 2.26e-14 | 76.6 |
| Msa0838350 | AT4G22910.1 | 27.572 | 243 | 166 | 8 | 237 | 473 | 231 | 469 | 2.83e-14 | 75.5 |
| Msa0838350 | AT1G15440.2 | 25.329 | 304 | 201 | 8 | 181 | 460 | 307 | 608 | 4.59e-14 | 75.5 |
| Msa0838350 | AT1G15440.2 | 24.528 | 212 | 153 | 5 | 264 | 471 | 306 | 514 | 5.23e-11 | 65.5 |
| Msa0838350 | AT1G15440.1 | 25.329 | 304 | 201 | 8 | 181 | 460 | 347 | 648 | 5.30e-14 | 75.1 |
| Msa0838350 | AT1G15440.1 | 24.528 | 212 | 153 | 5 | 264 | 471 | 346 | 554 | 6.67e-11 | 65.5 |
| Msa0838350 | AT4G21130.1 | 27.083 | 192 | 117 | 5 | 289 | 460 | 128 | 316 | 1.46e-13 | 73.2 |
| Msa0838350 | AT3G21540.1 | 30.286 | 175 | 116 | 3 | 203 | 376 | 525 | 694 | 2.08e-13 | 73.2 |
| Msa0838350 | AT3G21540.1 | 24.715 | 263 | 160 | 6 | 201 | 460 | 466 | 693 | 4.33e-13 | 72.4 |
| Msa0838350 | AT5G43920.1 | 25.311 | 241 | 168 | 7 | 187 | 418 | 276 | 513 | 4.04e-13 | 72.0 |
| Msa0838350 | AT5G43920.1 | 23.693 | 287 | 206 | 6 | 188 | 463 | 232 | 516 | 8.51e-11 | 64.7 |
| Msa0838350 | AT1G15470.1 | 22.867 | 293 | 171 | 7 | 220 | 463 | 9 | 295 | 1.53e-12 | 68.9 |
| Msa0838350 | AT4G11920.1 | 26.335 | 281 | 197 | 8 | 192 | 466 | 178 | 454 | 2.04e-12 | 69.7 |
| Msa0838350 | AT3G05090.2 | 23.810 | 210 | 156 | 2 | 195 | 400 | 98 | 307 | 2.26e-12 | 69.7 |
| Msa0838350 | AT3G05090.2 | 23.618 | 199 | 146 | 2 | 189 | 383 | 136 | 332 | 3.76e-11 | 65.9 |
| Msa0838350 | AT3G05090.3 | 23.810 | 210 | 156 | 2 | 195 | 400 | 98 | 307 | 2.26e-12 | 69.7 |
| Msa0838350 | AT3G05090.3 | 23.618 | 199 | 146 | 2 | 189 | 383 | 136 | 332 | 3.76e-11 | 65.9 |
| Msa0838350 | AT3G05090.1 | 23.810 | 210 | 156 | 2 | 195 | 400 | 98 | 307 | 2.26e-12 | 69.7 |
| Msa0838350 | AT3G05090.1 | 23.618 | 199 | 146 | 2 | 189 | 383 | 136 | 332 | 3.76e-11 | 65.9 |
| Msa0838350 | AT1G10580.1 | 23.438 | 256 | 185 | 7 | 215 | 460 | 275 | 529 | 2.56e-12 | 69.3 |
| Msa0838350 | AT1G10580.1 | 22.745 | 255 | 179 | 8 | 177 | 418 | 323 | 572 | 7.22e-11 | 64.7 |
| Msa0838350 | AT3G18140.2 | 25.946 | 185 | 130 | 6 | 238 | 418 | 8 | 189 | 3.54e-12 | 66.2 |
| Msa0838350 | AT2G16780.1 | 29.333 | 150 | 97 | 4 | 278 | 418 | 183 | 332 | 4.92e-12 | 68.2 |
| Msa0838350 | AT5G54520.1 | 26.829 | 246 | 148 | 9 | 209 | 432 | 148 | 383 | 6.96e-12 | 67.8 |
| Msa0838350 | AT5G08560.1 | 21.756 | 262 | 197 | 5 | 162 | 418 | 301 | 559 | 7.86e-12 | 67.8 |
| Msa0838350 | AT5G08560.2 | 21.756 | 262 | 197 | 5 | 162 | 418 | 301 | 559 | 7.86e-12 | 67.8 |
| Msa0838350 | AT5G08560.3 | 21.756 | 262 | 197 | 5 | 162 | 418 | 301 | 559 | 7.86e-12 | 67.8 |
| Msa0838350 | AT5G13840.1 | 26.190 | 210 | 147 | 6 | 257 | 461 | 250 | 456 | 8.51e-12 | 67.8 |
| Msa0838350 | AT5G13840.2 | 26.190 | 210 | 147 | 6 | 257 | 461 | 250 | 456 | 8.51e-12 | 67.8 |
| Msa0838350 | AT5G60940.1 | 23.649 | 296 | 202 | 9 | 188 | 460 | 131 | 425 | 1.06e-11 | 67.0 |
| Msa0838350 | AT5G60940.2 | 23.649 | 296 | 202 | 9 | 188 | 460 | 39 | 333 | 1.24e-11 | 66.2 |
| Msa0838350 | AT4G05410.1 | 29.651 | 172 | 100 | 5 | 305 | 457 | 160 | 329 | 2.05e-11 | 66.6 |
| Msa0838350 | AT5G50230.1 | 22.816 | 206 | 155 | 1 | 178 | 379 | 265 | 470 | 2.79e-11 | 66.2 |
| Msa0838350 | AT4G35050.1 | 32.000 | 150 | 93 | 5 | 278 | 418 | 184 | 333 | 2.83e-11 | 65.9 |
| Msa0838350 | AT2G47990.1 | 27.848 | 158 | 103 | 4 | 309 | 460 | 96 | 248 | 7.22e-11 | 64.7 |
| Msa0838350 | AT5G50120.1 | 25.893 | 224 | 136 | 10 | 180 | 377 | 165 | 384 | 7.77e-11 | 64.3 |
Find 139 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTCTCCCGTGATGGAAAA+AGG | 0.204100 | 5_4:-12719344 | Msa0838350:CDS |
| AGGAATCATGGAAGTTAATA+AGG | 0.230110 | 5_4:-12719910 | Msa0838350:exon |
| TCATCCTCAGCCTCGTCTTT+TGG | 0.235189 | 5_4:+12719597 | None:intergenic |
| GTGAGCCAATTACCCTCTTT+AGG | 0.250334 | 5_4:-12719737 | Msa0838350:CDS |
| GGTCATAGTAGAAGTGTATT+TGG | 0.262326 | 5_4:-12718903 | Msa0838350:CDS |
| AAGCATGTGAAGACACTATC+AGG | 0.282928 | 5_4:-12718335 | Msa0838350:CDS |
| GGGGATGTTCAGCGACTTAC+TGG | 0.287638 | 5_4:-12719372 | Msa0838350:CDS |
| AAGATAACACTTGTCGCATT+TGG | 0.293252 | 5_4:-12718611 | Msa0838350:CDS |
| CTCTCCCTAAAGAGGGTAAT+TGG | 0.301620 | 5_4:+12719732 | None:intergenic |
| TGAGCCAATTACCCTCTTTA+GGG | 0.313281 | 5_4:-12719736 | Msa0838350:CDS |
| TTGCTAAATATTCTTTAGTA+AGG | 0.326881 | 5_4:-12719515 | Msa0838350:CDS |
| GTTAGTTCCGTGGATGTTCT+TGG | 0.341430 | 5_4:-12718299 | Msa0838350:CDS |
| AGACAGGTTGCGGATGATTA+TGG | 0.341718 | 5_4:-12719694 | Msa0838350:CDS |
| ATGACAAGACATGGAGGTTA+TGG | 0.358080 | 5_4:-12718962 | Msa0838350:CDS |
| CCTCACTGCCATGTCATTTG+TGG | 0.370445 | 5_4:+12719779 | None:intergenic |
| CGCATTGCCTTCCATCCATC+AGG | 0.374107 | 5_4:-12719008 | Msa0838350:CDS |
| AATCTCGAATTCAGTGAAAT+CGG | 0.380624 | 5_4:-12719393 | Msa0838350:CDS |
| GTGAGCGGGAATGGTGTATA+AGG | 0.386831 | 5_4:+12718569 | None:intergenic |
| AAGATGCTCTGGCTCGTGTA+TGG | 0.388969 | 5_4:-12718836 | Msa0838350:CDS |
| AGATAACACTTGTCGCATTT+GGG | 0.391160 | 5_4:-12718610 | Msa0838350:CDS |
| CCGGATCATCTCTTCTTCTC+CGG | 0.402604 | 5_4:+12719469 | None:intergenic |
| ACAAATGTTAACAAGTGAAA+TGG | 0.405626 | 5_4:+12716480 | None:intergenic |
| AAAATGATGAATCTGATTCC+TGG | 0.408504 | 5_4:+12716713 | None:intergenic |
| CCATCCATCAGGGAAGTACT+TGG | 0.410983 | 5_4:-12718997 | Msa0838350:CDS |
| CTGACCGGACAGCAAACTAT+TGG | 0.411826 | 5_4:-12719085 | Msa0838350:CDS |
| ACGCTCGGTGTGCCCCTTGA+AGG | 0.414199 | 5_4:+12719163 | None:intergenic |
| ACAGCTTTATCGTGCGATCA+TGG | 0.430256 | 5_4:+12716807 | None:intergenic |
| ATCTCGAATTCAGTGAAATC+GGG | 0.433473 | 5_4:-12719392 | Msa0838350:CDS |
| GCTCACCAAGATGGCGAAGA+TGG | 0.437049 | 5_4:+12719754 | None:intergenic |
| GAGAGGTTCGATGAGAGCTT+CGG | 0.440964 | 5_4:+12720329 | None:intergenic |
| TAGACTGGCGAGGGAGCGAC+AGG | 0.441962 | 5_4:-12719856 | Msa0838350:CDS |
| TAGTAGAAGTGTATTTGGTT+TGG | 0.451558 | 5_4:-12718898 | Msa0838350:CDS |
| ATGGAAGTTAATAAGGGTAC+TGG | 0.456031 | 5_4:-12719903 | Msa0838350:CDS |
| TGACAAGACATGGAGGTTAT+GGG | 0.460633 | 5_4:-12718961 | Msa0838350:CDS |
| CTCACTGCCATGTCATTTGT+GGG | 0.461184 | 5_4:+12719780 | None:intergenic |
| CGGATCATCTCTTCTTCTCC+GGG | 0.465818 | 5_4:+12719470 | None:intergenic |
| AACCTCAGGTTTGGTCAGGC+CGG | 0.465885 | 5_4:-12718364 | Msa0838350:intron |
| AGGTTATGGGACGTTGAAAC+AGG | 0.467715 | 5_4:-12718948 | Msa0838350:CDS |
| TTTGAGCCTTCATTGTGAAA+AGG | 0.468938 | 5_4:+12719564 | None:intergenic |
| ACCTCAGGTTTGGTCAGGCC+GGG | 0.469932 | 5_4:-12718363 | Msa0838350:intron |
| TGTTAACCTCAGGTTTGGTC+AGG | 0.470352 | 5_4:-12718368 | Msa0838350:intron |
| TAATTTAGAGTGAGCGGGAA+TGG | 0.472743 | 5_4:+12718560 | None:intergenic |
| CCTCTTTAGGGAGAGGGAGA+TGG | 0.472916 | 5_4:-12719724 | Msa0838350:CDS |
| ATCTTGTGGAAAAGATGCTC+TGG | 0.473143 | 5_4:-12718847 | Msa0838350:CDS |
| AGAAGTGTTCTAGCACTAGA+AGG | 0.473239 | 5_4:-12718798 | Msa0838350:CDS |
| GTGGCTAAATGATATCCATT+AGG | 0.476072 | 5_4:+12718642 | None:intergenic |
| TCTACTAATTTGAGTGACAT+AGG | 0.477802 | 5_4:-12716628 | Msa0838350:three_prime_UTR |
| AGGGCCCATCTTCGCCATCT+TGG | 0.485269 | 5_4:-12719759 | Msa0838350:CDS |
| CTCACCAAGATGGCGAAGAT+GGG | 0.487266 | 5_4:+12719755 | None:intergenic |
| GCTGGATGCCGATGGACAGC+TGG | 0.487654 | 5_4:-12719667 | Msa0838350:CDS |
| GGGAGATGGAGAGACGAGAC+AGG | 0.499314 | 5_4:-12719710 | Msa0838350:CDS |
| CTCTTCTTCTCCGGGCACGT+TGG | 0.499592 | 5_4:+12719478 | None:intergenic |
| CCGGAGAAGAAGAGATGATC+CGG | 0.501652 | 5_4:-12719469 | Msa0838350:CDS |
| TCTGCATCCACATCTTCATC+CGG | 0.502101 | 5_4:+12719450 | None:intergenic |
| ATCAGGCATGCTCCACAACT+TGG | 0.505799 | 5_4:+12719202 | None:intergenic |
| GGTTGCTCGTTCTCCCGTGA+TGG | 0.506079 | 5_4:-12719351 | Msa0838350:CDS |
| TGGAGAGACGAGACAGGTTG+CGG | 0.513395 | 5_4:-12719704 | Msa0838350:CDS |
| CCATCTCCCTCTCCCTAAAG+AGG | 0.514321 | 5_4:+12719724 | None:intergenic |
| GCAAACTATTGGAATGATCA+AGG | 0.516454 | 5_4:-12719074 | Msa0838350:CDS |
| CATTCCAATAGTTTGCTGTC+CGG | 0.518232 | 5_4:+12719081 | None:intergenic |
| CAGCTTTATCGTGCGATCAT+GGG | 0.518544 | 5_4:+12716808 | None:intergenic |
| CATACTATGGATGTTGACTA+AGG | 0.523420 | 5_4:-12716761 | Msa0838350:exon |
| ATGTGGATGCAGAGATGGAT+TGG | 0.524601 | 5_4:-12719440 | Msa0838350:CDS |
| TCTTCACATGCTTAAAGTCC+CGG | 0.525123 | 5_4:+12718345 | None:intergenic |
| GGAATCATGGAAGTTAATAA+GGG | 0.527623 | 5_4:-12719909 | Msa0838350:exon |
| GAGGAGTTACTTCTTCAAGA+AGG | 0.528917 | 5_4:-12718924 | Msa0838350:CDS |
| CACAAATGACATGGCAGTGA+GGG | 0.529130 | 5_4:-12719778 | Msa0838350:CDS |
| TGCTAAATATTCTTTAGTAA+GGG | 0.529743 | 5_4:-12719514 | Msa0838350:CDS |
| TGCAACATCAGTAGCACGCT+CGG | 0.532762 | 5_4:+12719148 | None:intergenic |
| TAGCAACTGCCTCTGCTGAC+CGG | 0.536136 | 5_4:-12719100 | Msa0838350:CDS |
| ACTAGAAGGTCATGTCAAAC+CGG | 0.536714 | 5_4:-12718784 | Msa0838350:intron |
| TACTCCAAAAGACGAGGCTG+AGG | 0.539532 | 5_4:-12719601 | Msa0838350:CDS |
| CAATATCAATCCTTGCATTG+AGG | 0.540524 | 5_4:+12719535 | None:intergenic |
| AAAGCTAATGAAAGCTCTTG+AGG | 0.540719 | 5_4:-12719643 | Msa0838350:CDS |
| GATATTAATTTAGAGTGAGC+GGG | 0.540958 | 5_4:+12718555 | None:intergenic |
| TTTCTGATTCTCTCAATCGC+AGG | 0.542187 | 5_4:-12720302 | Msa0838350:intron |
| AGATGCTCTGGCTCGTGTAT+GGG | 0.543006 | 5_4:-12718835 | Msa0838350:CDS |
| CAATTACCCTCTTTAGGGAG+AGG | 0.543638 | 5_4:-12719731 | Msa0838350:CDS |
| GCGGATGATTATGGCAAAGC+TGG | 0.544053 | 5_4:-12719685 | Msa0838350:CDS |
| GCAAGTCAAATTTGAGCCAC+AGG | 0.547802 | 5_4:-12718532 | Msa0838350:CDS |
| AATGATATACGATTAGTGCC+AGG | 0.551251 | 5_4:-12716731 | Msa0838350:three_prime_UTR |
| GATGGATTGGACATTGAAGC+AGG | 0.557147 | 5_4:-12719427 | Msa0838350:CDS |
| GCTAAATGATTATTGTGCAC+CGG | 0.557163 | 5_4:+12719119 | None:intergenic |
| GTGCCCAAGTACTTCCCTGA+TGG | 0.558865 | 5_4:+12718993 | None:intergenic |
| GATATCAGAAGAGAGTAGAC+TGG | 0.559257 | 5_4:-12719871 | Msa0838350:CDS |
| AATTACCCTCTTTAGGGAGA+GGG | 0.561846 | 5_4:-12719730 | Msa0838350:CDS |
| AGAAGAGAGTAGACTGGCGA+GGG | 0.562411 | 5_4:-12719865 | Msa0838350:CDS |
| TGAAGATGTGGATGCAGAGA+TGG | 0.564479 | 5_4:-12719445 | Msa0838350:CDS |
| GGGTAATTGGCTCACCAAGA+TGG | 0.565287 | 5_4:+12719745 | None:intergenic |
| GCGACAGGAGAAAACGATGC+AGG | 0.566180 | 5_4:-12719841 | Msa0838350:CDS |
| CATTGCGTATCCAACGTGCC+CGG | 0.568181 | 5_4:-12719488 | Msa0838350:CDS |
| GTCAAATTTGAGCCACAGGA+GGG | 0.571926 | 5_4:-12718528 | Msa0838350:CDS |
| TAACTGGAGCTACCAAGTTG+TGG | 0.574232 | 5_4:-12719214 | Msa0838350:CDS |
| CGATATTAATTTAGAGTGAG+CGG | 0.574277 | 5_4:+12718554 | None:intergenic |
| TACTGATGTTGCATATTCTC+CGG | 0.574958 | 5_4:-12719138 | Msa0838350:CDS |
| ATGCTCACTGGTAAAACCGT+TGG | 0.575224 | 5_4:+12716781 | None:intergenic |
| CAAATTCTCTCCTCAATGCA+AGG | 0.575524 | 5_4:-12719545 | Msa0838350:CDS |
| AATGGATATCATTTAGCCAC+CGG | 0.577609 | 5_4:-12718639 | Msa0838350:CDS |
| CTCATTTGACATGACAGCCA+AGG | 0.577920 | 5_4:-12718487 | Msa0838350:intron |
| ACGATAAAGCTGTGGTCCAA+CGG | 0.581172 | 5_4:-12716797 | Msa0838350:CDS |
| CTTGGCTGTCATGTCAAATG+AGG | 0.588506 | 5_4:+12718488 | None:intergenic |
| GGATCGTTAGCAGCATCTTG+TGG | 0.590492 | 5_4:-12718861 | Msa0838350:CDS |
| GTACTTCCCTGATGGATGGA+AGG | 0.591166 | 5_4:+12719001 | None:intergenic |
| AACATCCATAGTATGCTCAC+TGG | 0.592453 | 5_4:+12716769 | None:intergenic |
| GTATGTATTCTGCAGATGGT+GGG | 0.593789 | 5_4:-12716847 | Msa0838350:intron |
| GAAAGCTCTTGAGGATGAAG+AGG | 0.594875 | 5_4:-12719634 | Msa0838350:CDS |
| CTGCTAGCGATGACAAGACA+TGG | 0.599501 | 5_4:-12718971 | Msa0838350:CDS |
| CAGAAGAGAGTAGACTGGCG+AGG | 0.600042 | 5_4:-12719866 | Msa0838350:CDS |
| CTAGCTACAGAATCAAGCTA+AGG | 0.601388 | 5_4:+12716667 | None:intergenic |
| ACAAGTGTTATCTTCACCAC+CGG | 0.606447 | 5_4:+12718620 | None:intergenic |
| CCAAGTACTTCCCTGATGGA+TGG | 0.606521 | 5_4:+12718997 | None:intergenic |
| AGTCAAATTTGAGCCACAGG+AGG | 0.607173 | 5_4:-12718529 | Msa0838350:CDS |
| TGCTGTTCCCACAAATGACA+TGG | 0.607351 | 5_4:-12719787 | Msa0838350:CDS |
| TGGAAGGCAATGCGTGCAAG+AGG | 0.610199 | 5_4:+12719017 | None:intergenic |
| CATCCATCAGGGAAGTACTT+GGG | 0.615094 | 5_4:-12718996 | Msa0838350:CDS |
| AGATGATCCGGATGAAGATG+TGG | 0.621814 | 5_4:-12719457 | Msa0838350:CDS |
| ATGGCAAAGCTGGATGCCGA+TGG | 0.622753 | 5_4:-12719675 | Msa0838350:CDS |
| TTGATTCTGTAGCTAGCCTG+TGG | 0.625212 | 5_4:-12716660 | Msa0838350:three_prime_UTR |
| CATCTCCCTCTCCCTAAAGA+GGG | 0.627820 | 5_4:+12719725 | None:intergenic |
| AGTTCCGTGGATGTTCTTGG+AGG | 0.627943 | 5_4:-12718296 | Msa0838350:intron |
| GAACACTTCTATCAGTTCGA+AGG | 0.630311 | 5_4:+12718811 | None:intergenic |
| TGCAGGACCTCATGATGAGG+AGG | 0.630382 | 5_4:-12719824 | Msa0838350:CDS |
| TAGTAGATATGTGATACCAC+AGG | 0.634069 | 5_4:+12716644 | None:intergenic |
| AGCATGTGAAGACACTATCA+GGG | 0.638110 | 5_4:-12718334 | Msa0838350:CDS |
| GTTTGCTGTCCGGTCAGCAG+AGG | 0.638239 | 5_4:+12719091 | None:intergenic |
| CAGCACGCCTCCTCATCATG+AGG | 0.655571 | 5_4:+12719817 | None:intergenic |
| TCTCGAATTCAGTGAAATCG+GGG | 0.658793 | 5_4:-12719391 | Msa0838350:CDS |
| CGATGCAGGACCTCATGATG+AGG | 0.659595 | 5_4:-12719827 | Msa0838350:CDS |
| CCTACCTCCAAGAACATCCA+CGG | 0.664422 | 5_4:+12718292 | None:intergenic |
| AGAGAATCAGAAACAGAGAG+AGG | 0.664811 | 5_4:+12720312 | None:intergenic |
| GGATATCATTTAGCCACCGG+TGG | 0.666250 | 5_4:-12718636 | Msa0838350:CDS |
| CCACAAATGACATGGCAGTG+AGG | 0.672810 | 5_4:-12719779 | Msa0838350:CDS |
| AGTGTTATCTTCACCACCGG+TGG | 0.674956 | 5_4:+12718623 | None:intergenic |
| ATGGGACGTTGAAACAGGAG+AGG | 0.684829 | 5_4:-12718943 | Msa0838350:CDS |
| AACTTCTACTCCAAAAGACG+AGG | 0.686425 | 5_4:-12719607 | Msa0838350:CDS |
| GCATTGCCTTCCATCCATCA+GGG | 0.687750 | 5_4:-12719007 | Msa0838350:CDS |
| ATGATCGCACGATAAAGCTG+TGG | 0.691055 | 5_4:-12716805 | Msa0838350:CDS |
| TGAAGATAGAGTTAGTTCCG+TGG | 0.694642 | 5_4:-12718309 | Msa0838350:CDS |
| CTAGCGATGACAAGACATGG+AGG | 0.784286 | 5_4:-12718968 | Msa0838350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAACATAAAAAAATAATA+AGG | + | chr5_4:12716674-12716693 | None:intergenic | 10.0% |
| !! | AGTATGTATTTATATAAAAA+AGG | + | chr5_4:12720318-12720337 | None:intergenic | 10.0% |
| !! | CATAAAAAAATAATAAGGTA+AGG | + | chr5_4:12716669-12716688 | None:intergenic | 15.0% |
| !!! | TGTTCATAATTTGAAATTAA+AGG | + | chr5_4:12716764-12716783 | None:intergenic | 15.0% |
| !! | ATAAAGAAATTATACATTTG+TGG | - | chr5_4:12718567-12718586 | Msa0838350:CDS | 15.0% |
| !! | GAATTAAAAAAGTTAACTAA+AGG | - | chr5_4:12718695-12718714 | Msa0838350:intron | 15.0% |
| !!! | AATTTCTTTTATCGTAAAAA+AGG | + | chr5_4:12718979-12718998 | None:intergenic | 15.0% |
| !! | TGTGCAATATATAATATAAT+AGG | + | chr5_4:12719903-12719922 | None:intergenic | 15.0% |
| !! | GAATAGAAAGAAAGTAAAAT+AGG | + | chr5_4:12716610-12716629 | None:intergenic | 20.0% |
| !! | TTGCTAAATATTCTTTAGTA+AGG | - | chr5_4:12717303-12717322 | Msa0838350:intron | 20.0% |
| !! | TGCTAAATATTCTTTAGTAA+GGG | - | chr5_4:12717304-12717323 | Msa0838350:intron | 20.0% |
| !! | CTAAAAATGAAATTCAAGAA+TGG | + | chr5_4:12718135-12718154 | None:intergenic | 20.0% |
| !!! | AAGAATATAGTTGTTATTCT+AGG | + | chr5_4:12718379-12718398 | None:intergenic | 20.0% |
| !! | AACACATAAATAAGGAAAAA+GGG | + | chr5_4:12718607-12718626 | None:intergenic | 20.0% |
| !! | TAACACATAAATAAGGAAAA+AGG | + | chr5_4:12718608-12718627 | None:intergenic | 20.0% |
| !! | AATGGAATAACACATAAATA+AGG | + | chr5_4:12718615-12718634 | None:intergenic | 20.0% |
| !!! | TACATGAAATGTGTAATTTT+CGG | - | chr5_4:12718799-12718818 | Msa0838350:CDS | 20.0% |
| !!! | TTTTTTCAATGAATTTTCCA+GGG | + | chr5_4:12718835-12718854 | None:intergenic | 20.0% |
| !!! | TTTTTTTCAATGAATTTTCC+AGG | + | chr5_4:12718836-12718855 | None:intergenic | 20.0% |
| !! | AAGAAAGAAAACATACAAAT+TGG | - | chr5_4:12719009-12719028 | Msa0838350:CDS | 20.0% |
| !! | AGAAAGAAAACATACAAATT+GGG | - | chr5_4:12719010-12719029 | Msa0838350:CDS | 20.0% |
| !! | TTAAGGTTTATTTCCTAAAT+GGG | + | chr5_4:12719051-12719070 | None:intergenic | 20.0% |
| !! | TGAAAGTGATTAATAAACAA+TGG | + | chr5_4:12719313-12719332 | None:intergenic | 20.0% |
| !!! | AATCTCTGTTATTATAGTTT+TGG | + | chr5_4:12719498-12719517 | None:intergenic | 20.0% |
| ! | CACATAAGAAAAAGAAAGAA+AGG | + | chr5_4:12716548-12716567 | None:intergenic | 25.0% |
| ! | TTTGTTTCCTTGAATGTTAT+TGG | - | chr5_4:12716690-12716709 | Msa0838350:three_prime_UTR | 25.0% |
| ! | AATCATACCAATAACATTCA+AGG | + | chr5_4:12716700-12716719 | None:intergenic | 25.0% |
| !!! | TTCTTTCTTTTTTACTAGCT+AGG | - | chr5_4:12716888-12716907 | Msa0838350:intron | 25.0% |
| ! | AGAGAACTAGAAAAGAAAAA+GGG | + | chr5_4:12717585-12717604 | None:intergenic | 25.0% |
| ! | TAGAGAACTAGAAAAGAAAA+AGG | + | chr5_4:12717586-12717605 | None:intergenic | 25.0% |
| !!! | GTAGAAACTTTTTTTACATC+AGG | + | chr5_4:12717636-12717655 | None:intergenic | 25.0% |
| ! | AAAAAAAGTTTCTACCTTCA+AGG | - | chr5_4:12717641-12717660 | Msa0838350:intron | 25.0% |
| ! | AAAAAAGTTTCTACCTTCAA+GGG | - | chr5_4:12717642-12717661 | Msa0838350:intron | 25.0% |
| !!! | ATCTCTTTTGAGAACATTTA+AGG | - | chr5_4:12717767-12717786 | Msa0838350:intron | 25.0% |
| !!! | TCTCTTTTGAGAACATTTAA+GGG | - | chr5_4:12717768-12717787 | Msa0838350:intron | 25.0% |
| ! | TGGAAAAAAAGATAGAATGA+TGG | + | chr5_4:12718093-12718112 | None:intergenic | 25.0% |
| !!! | GAATTTCATTTTTAGATTCG+TGG | - | chr5_4:12718140-12718159 | Msa0838350:intron | 25.0% |
| ! | TATATTTATGTGTTAACCTC+AGG | - | chr5_4:12718440-12718459 | Msa0838350:intron | 25.0% |
| ! | ACACATCAATCACATAATAA+TGG | + | chr5_4:12718633-12718652 | None:intergenic | 25.0% |
| !! | ACATGAAATGTGTAATTTTC+GGG | - | chr5_4:12718800-12718819 | Msa0838350:CDS | 25.0% |
| !!! | TTTTTCAATGAATTTTCCAG+GGG | + | chr5_4:12718834-12718853 | None:intergenic | 25.0% |
| ! | GAAAGAAAACATACAAATTG+GGG | - | chr5_4:12719011-12719030 | Msa0838350:CDS | 25.0% |
| ! | AAAGAAAACATACAAATTGG+GGG | - | chr5_4:12719012-12719031 | Msa0838350:CDS | 25.0% |
| !!! | TTTATTTCCTAAATGGGTTT+TGG | + | chr5_4:12719045-12719064 | None:intergenic | 25.0% |
| ! | CTTAAGGTTTATTTCCTAAA+TGG | + | chr5_4:12719052-12719071 | None:intergenic | 25.0% |
| ! | TAGGAAATAAACCTTAAGTT+AGG | - | chr5_4:12719054-12719073 | Msa0838350:CDS | 25.0% |
| ! | TTCATTCACTATTTCACTAT+TGG | + | chr5_4:12719104-12719123 | None:intergenic | 25.0% |
| ! | ATCTCTTAAAATAGTGACAT+AGG | - | chr5_4:12719461-12719480 | Msa0838350:CDS | 25.0% |
| ! | AAAATGAAAATCCATTGTTC+TGG | + | chr5_4:12719581-12719600 | None:intergenic | 25.0% |
| !! | TTTTGTCATGTTGAAATATG+AGG | - | chr5_4:12719615-12719634 | Msa0838350:CDS | 25.0% |
| ! | ATATGAAAAGGCTATGTAAA+AGG | + | chr5_4:12719651-12719670 | None:intergenic | 25.0% |
| !! | TTTTACATAGCCTTTTCATA+TGG | - | chr5_4:12719650-12719669 | Msa0838350:CDS | 25.0% |
| !! | AATGATAATGTTTCGAAAAC+AGG | + | chr5_4:12719729-12719748 | None:intergenic | 25.0% |
| ACAAAAATAGAGAAAGGAAG+CGG | + | chr5_4:12716582-12716601 | None:intergenic | 30.0% | |
| GCAGAAACAAAAATAGAGAA+AGG | + | chr5_4:12716588-12716607 | None:intergenic | 30.0% | |
| TTTATATGCATGCGTATAAC+TGG | - | chr5_4:12716808-12716827 | Msa0838350:CDS | 30.0% | |
| ! | TTTTTACTAGCTAGGAATCA+TGG | - | chr5_4:12716896-12716915 | Msa0838350:intron | 30.0% |
| AGGAATCATGGAAGTTAATA+AGG | - | chr5_4:12716908-12716927 | Msa0838350:intron | 30.0% | |
| GGAATCATGGAAGTTAATAA+GGG | - | chr5_4:12716909-12716928 | Msa0838350:intron | 30.0% | |
| AATCTCGAATTCAGTGAAAT+CGG | - | chr5_4:12717425-12717444 | Msa0838350:intron | 30.0% | |
| ! | GTATGTTCGTTTTGCAAATT+GGG | - | chr5_4:12717508-12717527 | Msa0838350:intron | 30.0% |
| !!! | TTCTTTTCTAGTTCTCTAAC+TGG | - | chr5_4:12717588-12717607 | Msa0838350:intron | 30.0% |
| AAAAAGTTTCTACCTTCAAG+GGG | - | chr5_4:12717643-12717662 | Msa0838350:intron | 30.0% | |
| ! | TAGTAGAAGTGTATTTGGTT+TGG | - | chr5_4:12717920-12717939 | Msa0838350:intron | 30.0% |
| !! | ATGATGGATAAATGAGAAGA+GGG | + | chr5_4:12718077-12718096 | None:intergenic | 30.0% |
| !! | AATGATGGATAAATGAGAAG+AGG | + | chr5_4:12718078-12718097 | None:intergenic | 30.0% |
| ! | TTTTTCCATAGTATTTTGCC+AGG | - | chr5_4:12718105-12718124 | Msa0838350:intron | 30.0% |
| ! | GATATTAATTTAGAGTGAGC+GGG | + | chr5_4:12718266-12718285 | None:intergenic | 30.0% |
| ! | CGATATTAATTTAGAGTGAG+CGG | + | chr5_4:12718267-12718286 | None:intergenic | 30.0% |
| ! | AGAAATAGAAAGGTATACCT+TGG | + | chr5_4:12718351-12718370 | None:intergenic | 30.0% |
| CTAGGTAGAAAGAAATAGAA+AGG | + | chr5_4:12718361-12718380 | None:intergenic | 30.0% | |
| AAATTATACATTTGTGGCTC+TGG | - | chr5_4:12718573-12718592 | Msa0838350:CDS | 30.0% | |
| AATTCATCATGTACAAGTGA+AGG | + | chr5_4:12718680-12718699 | None:intergenic | 30.0% | |
| ! | CATGAAATGTGTAATTTTCG+GGG | - | chr5_4:12718801-12718820 | Msa0838350:CDS | 30.0% |
| !! | GATTCTCTCCATTTTTCAAA+AGG | - | chr5_4:12718923-12718942 | Msa0838350:CDS | 30.0% |
| !! | TTTCCACTCCTTTTGAAAAA+TGG | + | chr5_4:12718934-12718953 | None:intergenic | 30.0% |
| AAGAAAACATACAAATTGGG+GGG | - | chr5_4:12719013-12719032 | Msa0838350:CDS | 30.0% | |
| !!! | TTTCTGGTTTTCCTAACTTA+AGG | + | chr5_4:12719068-12719087 | None:intergenic | 30.0% |
| AGTGAAATAGTGAATGAACT+TGG | - | chr5_4:12719106-12719125 | Msa0838350:CDS | 30.0% | |
| GTGAAATAGTGAATGAACTT+GGG | - | chr5_4:12719107-12719126 | Msa0838350:CDS | 30.0% | |
| TGAAATAGTGAATGAACTTG+GGG | - | chr5_4:12719108-12719127 | Msa0838350:CDS | 30.0% | |
| ! | CATAGATTTTGAATGCTCAA+TGG | + | chr5_4:12719145-12719164 | None:intergenic | 30.0% |
| TGTATACATATTCCTAGAGA+AGG | + | chr5_4:12719200-12719219 | None:intergenic | 30.0% | |
| ! | ATAATAAAAGTACAGTGCCT+TGG | + | chr5_4:12719278-12719297 | None:intergenic | 30.0% |
| ! | GTAGAGATCATTTTCATGAA+TGG | + | chr5_4:12719522-12719541 | None:intergenic | 30.0% |
| AGCTTATAAGCCATATGAAA+AGG | + | chr5_4:12719663-12719682 | None:intergenic | 30.0% | |
| CATATTTCCAAACAAGTTCT+AGG | + | chr5_4:12719690-12719709 | None:intergenic | 30.0% | |
| ! | CTAGAACTTGTTTGGAAATA+TGG | - | chr5_4:12719688-12719707 | Msa0838350:CDS | 30.0% |
| ! | ATCTAGTTTATGTGCTTTGA+AGG | - | chr5_4:12719843-12719862 | Msa0838350:CDS | 30.0% |
| !!! | AGGTCTTCATTTTTTTCTTC+CGG | - | chr5_4:12719863-12719882 | Msa0838350:CDS | 30.0% |
| CAAGAAAGGCAAAAATAACA+TGG | + | chr5_4:12719940-12719959 | None:intergenic | 30.0% | |
| TACCAAAATCAGTACAAGAA+AGG | + | chr5_4:12719954-12719973 | None:intergenic | 30.0% | |
| AAAATGATGAATCTGATTCC+TGG | + | chr5_4:12720108-12720127 | None:intergenic | 30.0% | |
| TCTACTAATTTGAGTGACAT+AGG | - | chr5_4:12720190-12720209 | Msa0838350:intron | 30.0% | |
| TAAGGTAAGGCAAAGTAGTA+CGG | + | chr5_4:12716656-12716675 | None:intergenic | 35.0% | |
| ! | ATGGAAGTTAATAAGGGTAC+TGG | - | chr5_4:12716915-12716934 | Msa0838350:intron | 35.0% |
| AAAGCTAATGAAAGCTCTTG+AGG | - | chr5_4:12717175-12717194 | Msa0838350:intron | 35.0% | |
| ! | CAGTATCCTTTTCACAATGA+AGG | - | chr5_4:12717248-12717267 | Msa0838350:intron | 35.0% |
| TTTGAGCCTTCATTGTGAAA+AGG | + | chr5_4:12717257-12717276 | None:intergenic | 35.0% | |
| CAATATCAATCCTTGCATTG+AGG | + | chr5_4:12717286-12717305 | None:intergenic | 35.0% | |
| ATCTCGAATTCAGTGAAATC+GGG | - | chr5_4:12717426-12717445 | Msa0838350:intron | 35.0% | |
| ATTTGCAAAACGAACATACC+AGG | + | chr5_4:12717507-12717526 | None:intergenic | 35.0% | |
| ! | GGTATGTTCGTTTTGCAAAT+TGG | - | chr5_4:12717507-12717526 | Msa0838350:intron | 35.0% |
| ATTAGACAAGGCAAGTAAGA+TGG | + | chr5_4:12717553-12717572 | None:intergenic | 35.0% | |
| TACTGATGTTGCATATTCTC+CGG | - | chr5_4:12717680-12717699 | Msa0838350:intron | 35.0% | |
| GCTAAATGATTATTGTGCAC+CGG | + | chr5_4:12717702-12717721 | None:intergenic | 35.0% | |
| GCAAACTATTGGAATGATCA+AGG | - | chr5_4:12717744-12717763 | Msa0838350:intron | 35.0% | |
| ! | GGTCATAGTAGAAGTGTATT+TGG | - | chr5_4:12717915-12717934 | Msa0838350:intron | 35.0% |
| GGCGATCTTTAATATCTTAC+CGG | + | chr5_4:12718056-12718075 | None:intergenic | 35.0% | |
| GTGGCTAAATGATATCCATT+AGG | + | chr5_4:12718179-12718198 | None:intergenic | 35.0% | |
| AATGGATATCATTTAGCCAC+CGG | - | chr5_4:12718179-12718198 | Msa0838350:intron | 35.0% | |
| AAGATAACACTTGTCGCATT+TGG | - | chr5_4:12718207-12718226 | Msa0838350:intron | 35.0% | |
| AGATAACACTTGTCGCATTT+GGG | - | chr5_4:12718208-12718227 | Msa0838350:intron | 35.0% | |
| TTATGTGTTAACCTCAGGTT+TGG | - | chr5_4:12718445-12718464 | Msa0838350:intron | 35.0% | |
| ! | TGTGTGTCAATGAGTTTTTG+TGG | - | chr5_4:12718774-12718793 | Msa0838350:intron | 35.0% |
| !! | TCTCCATTTTTCAAAAGGAG+TGG | - | chr5_4:12718928-12718947 | Msa0838350:CDS | 35.0% |
| AAGGAAAAACCTAACACTGA+TGG | + | chr5_4:12718960-12718979 | None:intergenic | 35.0% | |
| GAAATAGTGAATGAACTTGG+GGG | - | chr5_4:12719109-12719128 | Msa0838350:CDS | 35.0% | |
| AAATAGTGAATGAACTTGGG+GGG | - | chr5_4:12719110-12719129 | Msa0838350:CDS | 35.0% | |
| ! | AGATTTTGAATGCTCAATGG+TGG | + | chr5_4:12719142-12719161 | None:intergenic | 35.0% |
| GCAACATAATTTCCTTCTCT+AGG | - | chr5_4:12719185-12719204 | Msa0838350:CDS | 35.0% | |
| ATAGAAAGAGCTCGTAACAT+GGG | + | chr5_4:12719354-12719373 | None:intergenic | 35.0% | |
| ACACTAATGGCTGAAAACAT+TGG | + | chr5_4:12719424-12719443 | None:intergenic | 35.0% | |
| ! | TGTTTTCAGCCATTAGTGTT+AGG | - | chr5_4:12719425-12719444 | Msa0838350:CDS | 35.0% |
| GTCTTTACACCTAACACTAA+TGG | + | chr5_4:12719437-12719456 | None:intergenic | 35.0% | |
| TTCTGGATTTCCTTTCACTT+TGG | + | chr5_4:12719564-12719583 | None:intergenic | 35.0% | |
| TGAAAGGAAATCCAGAACAA+TGG | - | chr5_4:12719567-12719586 | Msa0838350:CDS | 35.0% | |
| !!! | TCTTCATTTTTTTCTTCCGG+TGG | - | chr5_4:12719866-12719885 | Msa0838350:CDS | 35.0% |
| !!! | TGCCTTTCTTGTACTGATTT+TGG | - | chr5_4:12719949-12719968 | Msa0838350:intron | 35.0% |
| TTTGGTATGTATTCTGCAGA+TGG | - | chr5_4:12719967-12719986 | Msa0838350:intron | 35.0% | |
| ! | TTTTACCAGTGAGCATACTA+TGG | - | chr5_4:12720044-12720063 | Msa0838350:intron | 35.0% |
| ! | CATACTATGGATGTTGACTA+AGG | - | chr5_4:12720057-12720076 | Msa0838350:intron | 35.0% |
| AATGATATACGATTAGTGCC+AGG | - | chr5_4:12720087-12720106 | Msa0838350:intron | 35.0% | |
| TAGTAGATATGTGATACCAC+AGG | + | chr5_4:12720177-12720196 | None:intergenic | 35.0% | |
| AGAGAATCAGAAACAGAGAG+AGG | + | chr5_4:12716509-12716528 | None:intergenic | 40.0% | |
| TTTCTGATTCTCTCAATCGC+AGG | - | chr5_4:12716516-12716535 | Msa0838350:three_prime_UTR | 40.0% | |
| GATATCAGAAGAGAGTAGAC+TGG | - | chr5_4:12716947-12716966 | Msa0838350:intron | 40.0% | |
| TGAGCCAATTACCCTCTTTA+GGG | - | chr5_4:12717082-12717101 | Msa0838350:intron | 40.0% | |
| ! | AATTACCCTCTTTAGGGAGA+GGG | - | chr5_4:12717088-12717107 | Msa0838350:intron | 40.0% |
| !!! | GTCTTTTGGAGTAGAAGTTG+CGG | + | chr5_4:12717210-12717229 | None:intergenic | 40.0% |
| AACTTCTACTCCAAAAGACG+AGG | - | chr5_4:12717211-12717230 | Msa0838350:intron | 40.0% | |
| CAAATTCTCTCCTCAATGCA+AGG | - | chr5_4:12717273-12717292 | Msa0838350:intron | 40.0% | |
| TCTCGAATTCAGTGAAATCG+GGG | - | chr5_4:12717427-12717446 | Msa0838350:intron | 40.0% | |
| ! | AAGCAACCCTTTTTCCATCA+CGG | + | chr5_4:12717484-12717503 | None:intergenic | 40.0% |
| GGGCATTAGAAGATTAGACA+AGG | + | chr5_4:12717565-12717584 | None:intergenic | 40.0% | |
| !! | CATTCCAATAGTTTGCTGTC+CGG | + | chr5_4:12717740-12717759 | None:intergenic | 40.0% |
| ATGACAAGACATGGAGGTTA+TGG | - | chr5_4:12717856-12717875 | Msa0838350:intron | 40.0% | |
| TGACAAGACATGGAGGTTAT+GGG | - | chr5_4:12717857-12717876 | Msa0838350:intron | 40.0% | |
| GAGGAGTTACTTCTTCAAGA+AGG | - | chr5_4:12717894-12717913 | Msa0838350:intron | 40.0% | |
| !!! | GGTTTGGCTTTTCATCATGA+TGG | - | chr5_4:12717936-12717955 | Msa0838350:intron | 40.0% |
| ATCTTGTGGAAAAGATGCTC+TGG | - | chr5_4:12717971-12717990 | Msa0838350:intron | 40.0% | |
| GAACACTTCTATCAGTTCGA+AGG | + | chr5_4:12718010-12718029 | None:intergenic | 40.0% | |
| !! | AGAAGTGTTCTAGCACTAGA+AGG | - | chr5_4:12718020-12718039 | Msa0838350:intron | 40.0% |
| ACTAGAAGGTCATGTCAAAC+CGG | - | chr5_4:12718034-12718053 | Msa0838350:intron | 40.0% | |
| AAATTCAAGAATGGTCAGCC+TGG | + | chr5_4:12718126-12718145 | None:intergenic | 40.0% | |
| ! | GGCATCAGTTTTTCTCCTAA+TGG | - | chr5_4:12718161-12718180 | Msa0838350:intron | 40.0% |
| ACAAGTGTTATCTTCACCAC+CGG | + | chr5_4:12718201-12718220 | None:intergenic | 40.0% | |
| ! | TAATTTAGAGTGAGCGGGAA+TGG | + | chr5_4:12718261-12718280 | None:intergenic | 40.0% |
| TCTTCACATGCTTAAAGTCC+CGG | + | chr5_4:12718476-12718495 | None:intergenic | 40.0% | |
| AAGCATGTGAAGACACTATC+AGG | - | chr5_4:12718483-12718502 | Msa0838350:intron | 40.0% | |
| AGCATGTGAAGACACTATCA+GGG | - | chr5_4:12718484-12718503 | Msa0838350:intron | 40.0% | |
| TGAAGATAGAGTTAGTTCCG+TGG | - | chr5_4:12718509-12718528 | Msa0838350:CDS | 40.0% | |
| AGATCATAGGTGAGGTCAAA+TGG | + | chr5_4:12718656-12718675 | None:intergenic | 40.0% | |
| TACAAGTGAAGGCAGATCAT+AGG | + | chr5_4:12718669-12718688 | None:intergenic | 40.0% | |
| AATCCTTACCCCTTAGTCTA+CGG | + | chr5_4:12718907-12718926 | None:intergenic | 40.0% | |
| CATAGAAAGAGCTCGTAACA+TGG | + | chr5_4:12719355-12719374 | None:intergenic | 40.0% | |
| !! | TGCTCTTTTGGCTGAGTATA+AGG | + | chr5_4:12719392-12719411 | None:intergenic | 40.0% |
| TTTGGCTACACTGCATAATC+TGG | + | chr5_4:12719546-12719565 | None:intergenic | 40.0% | |
| ! | GCTTCAACCTAGAACTTGTT+TGG | - | chr5_4:12719680-12719699 | Msa0838350:CDS | 40.0% |
| ATGTTTCGAAAACAGGCTCA+AGG | + | chr5_4:12719722-12719741 | None:intergenic | 40.0% | |
| ATAGGCGCAATATATTCCAC+CGG | + | chr5_4:12719885-12719904 | None:intergenic | 40.0% | |
| GTATGTATTCTGCAGATGGT+GGG | - | chr5_4:12719971-12719990 | Msa0838350:intron | 40.0% | |
| AACATCCATAGTATGCTCAC+TGG | + | chr5_4:12720052-12720071 | None:intergenic | 40.0% | |
| CTAGCTACAGAATCAAGCTA+AGG | + | chr5_4:12720154-12720173 | None:intergenic | 40.0% | |
| TGCATGCGTATAACTGGAGT+TGG | - | chr5_4:12716814-12716833 | Msa0838350:CDS | 45.0% | |
| TGCTGTTCCCACAAATGACA+TGG | - | chr5_4:12717031-12717050 | Msa0838350:intron | 45.0% | |
| ! | CTCACTGCCATGTCATTTGT+GGG | + | chr5_4:12717041-12717060 | None:intergenic | 45.0% |
| CACAAATGACATGGCAGTGA+GGG | - | chr5_4:12717040-12717059 | Msa0838350:intron | 45.0% | |
| GTGAGCCAATTACCCTCTTT+AGG | - | chr5_4:12717081-12717100 | Msa0838350:intron | 45.0% | |
| CTCTCCCTAAAGAGGGTAAT+TGG | + | chr5_4:12717089-12717108 | None:intergenic | 45.0% | |
| ! | CAATTACCCTCTTTAGGGAG+AGG | - | chr5_4:12717087-12717106 | Msa0838350:intron | 45.0% |
| AGACAGGTTGCGGATGATTA+TGG | - | chr5_4:12717124-12717143 | Msa0838350:intron | 45.0% | |
| ! | TAGCTTTTCCAGCTGTCCAT+CGG | + | chr5_4:12717162-12717181 | None:intergenic | 45.0% |
| GAAAGCTCTTGAGGATGAAG+AGG | - | chr5_4:12717184-12717203 | Msa0838350:intron | 45.0% | |
| AGATGATCCGGATGAAGATG+TGG | - | chr5_4:12717361-12717380 | Msa0838350:intron | 45.0% | |
| TCTGCATCCACATCTTCATC+CGG | + | chr5_4:12717371-12717390 | None:intergenic | 45.0% | |
| TGAAGATGTGGATGCAGAGA+TGG | - | chr5_4:12717373-12717392 | Msa0838350:intron | 45.0% | |
| ATGTGGATGCAGAGATGGAT+TGG | - | chr5_4:12717378-12717397 | Msa0838350:intron | 45.0% | |
| !! | GATGGATTGGACATTGAAGC+AGG | - | chr5_4:12717391-12717410 | Msa0838350:intron | 45.0% |
| ! | GTTCTCCCGTGATGGAAAAA+GGG | - | chr5_4:12717475-12717494 | Msa0838350:intron | 45.0% |
| ! | AGCAACCCTTTTTCCATCAC+GGG | + | chr5_4:12717483-12717502 | None:intergenic | 45.0% |
| ATGGAAAAAGGGTTGCTTCC+TGG | - | chr5_4:12717486-12717505 | Msa0838350:intron | 45.0% | |
| TAACTGGAGCTACCAAGTTG+TGG | - | chr5_4:12717604-12717623 | Msa0838350:intron | 45.0% | |
| !! | CATCCATCAGGGAAGTACTT+GGG | - | chr5_4:12717822-12717841 | Msa0838350:intron | 45.0% |
| AGGTTATGGGACGTTGAAAC+AGG | - | chr5_4:12717870-12717889 | Msa0838350:intron | 45.0% | |
| GTCAGCCTGGCAAAATACTA+TGG | + | chr5_4:12718113-12718132 | None:intergenic | 45.0% | |
| GCAAGTCAAATTTGAGCCAC+AGG | - | chr5_4:12718286-12718305 | Msa0838350:intron | 45.0% | |
| AGTCAAATTTGAGCCACAGG+AGG | - | chr5_4:12718289-12718308 | Msa0838350:intron | 45.0% | |
| GTCAAATTTGAGCCACAGGA+GGG | - | chr5_4:12718290-12718309 | Msa0838350:intron | 45.0% | |
| ACCAAAAAGAAACCCTCCTG+TGG | + | chr5_4:12718305-12718324 | None:intergenic | 45.0% | |
| CTTGGCTGTCATGTCAAATG+AGG | + | chr5_4:12718333-12718352 | None:intergenic | 45.0% | |
| CTCATTTGACATGACAGCCA+AGG | - | chr5_4:12718331-12718350 | Msa0838350:CDS | 45.0% | |
| ! | TGTTAACCTCAGGTTTGGTC+AGG | - | chr5_4:12718450-12718469 | Msa0838350:intron | 45.0% |
| GTTAGTTCCGTGGATGTTCT+TGG | - | chr5_4:12718519-12718538 | Msa0838350:CDS | 45.0% | |
| TACCTTCATGCCGTAGACTA+AGG | - | chr5_4:12718894-12718913 | Msa0838350:CDS | 45.0% | |
| ACCTTCATGCCGTAGACTAA+GGG | - | chr5_4:12718895-12718914 | Msa0838350:CDS | 45.0% | |
| TGGAAAGCTCCATCAGTGTT+AGG | - | chr5_4:12718948-12718967 | Msa0838350:CDS | 45.0% | |
| ACATACAAATTGGGGGGACT+AGG | - | chr5_4:12719019-12719038 | Msa0838350:CDS | 45.0% | |
| GACTAGGCCAAAACCCATTT+AGG | - | chr5_4:12719035-12719054 | Msa0838350:CDS | 45.0% | |
| ! | TGGCATGCAAGAGACTTTTC+TGG | + | chr5_4:12719084-12719103 | None:intergenic | 45.0% |
| CCTTGGACAATAAGCAACAG+AGG | + | chr5_4:12719261-12719280 | None:intergenic | 45.0% | |
| ! | CCTCTGTTGCTTATTGTCCA+AGG | - | chr5_4:12719258-12719277 | Msa0838350:intron | 45.0% |
| TGCAGTGTAGCCAAAGTGAA+AGG | - | chr5_4:12719551-12719570 | Msa0838350:CDS | 45.0% | |
| ATGTGCCTGTTGTTGCGTTT+GGG | - | chr5_4:12719802-12719821 | Msa0838350:CDS | 45.0% | |
| GGTATGTATTCTGCAGATGG+TGG | - | chr5_4:12719970-12719989 | Msa0838350:intron | 45.0% | |
| ! | CAGCTTTATCGTGCGATCAT+GGG | + | chr5_4:12720013-12720032 | None:intergenic | 45.0% |
| ! | ACAGCTTTATCGTGCGATCA+TGG | + | chr5_4:12720014-12720033 | None:intergenic | 45.0% |
| ATGATCGCACGATAAAGCTG+TGG | - | chr5_4:12720013-12720032 | Msa0838350:intron | 45.0% | |
| ACGATAAAGCTGTGGTCCAA+CGG | - | chr5_4:12720021-12720040 | Msa0838350:intron | 45.0% | |
| ATGCTCACTGGTAAAACCGT+TGG | + | chr5_4:12720040-12720059 | None:intergenic | 45.0% | |
| ! | TTGATTCTGTAGCTAGCCTG+TGG | - | chr5_4:12720158-12720177 | Msa0838350:intron | 45.0% |
| !! | TAATTTCTTTATAATTTATA+AGG | + | chr5_4:12718559-12718578 | None:intergenic | 5.0% |
| GAGAGGTTCGATGAGAGCTT+CGG | + | chr5_4:12716492-12716511 | None:intergenic | 50.0% | |
| AGAAGAGAGTAGACTGGCGA+GGG | - | chr5_4:12716953-12716972 | Msa0838350:intron | 50.0% | |
| ! | CCTCACTGCCATGTCATTTG+TGG | + | chr5_4:12717042-12717061 | None:intergenic | 50.0% |
| CCACAAATGACATGGCAGTG+AGG | - | chr5_4:12717039-12717058 | Msa0838350:intron | 50.0% | |
| CTCACCAAGATGGCGAAGAT+GGG | + | chr5_4:12717066-12717085 | None:intergenic | 50.0% | |
| ! | GGGTAATTGGCTCACCAAGA+TGG | + | chr5_4:12717076-12717095 | None:intergenic | 50.0% |
| CATCTCCCTCTCCCTAAAGA+GGG | + | chr5_4:12717096-12717115 | None:intergenic | 50.0% | |
| GCGGATGATTATGGCAAAGC+TGG | - | chr5_4:12717133-12717152 | Msa0838350:intron | 50.0% | |
| TACTCCAAAAGACGAGGCTG+AGG | - | chr5_4:12717217-12717236 | Msa0838350:intron | 50.0% | |
| ! | TCATCCTCAGCCTCGTCTTT+TGG | + | chr5_4:12717224-12717243 | None:intergenic | 50.0% |
| CGGATCATCTCTTCTTCTCC+GGG | + | chr5_4:12717351-12717370 | None:intergenic | 50.0% | |
| CCGGATCATCTCTTCTTCTC+CGG | + | chr5_4:12717352-12717371 | None:intergenic | 50.0% | |
| CCGGAGAAGAAGAGATGATC+CGG | - | chr5_4:12717349-12717368 | Msa0838350:intron | 50.0% | |
| ! | CGTTCTCCCGTGATGGAAAA+AGG | - | chr5_4:12717474-12717493 | Msa0838350:intron | 50.0% |
| ATCAGGCATGCTCCACAACT+TGG | + | chr5_4:12717619-12717638 | None:intergenic | 50.0% | |
| TGCAACATCAGTAGCACGCT+CGG | + | chr5_4:12717673-12717692 | None:intergenic | 50.0% | |
| CTGACCGGACAGCAAACTAT+TGG | - | chr5_4:12717733-12717752 | Msa0838350:intron | 50.0% | |
| GCATTGCCTTCCATCCATCA+GGG | - | chr5_4:12717811-12717830 | Msa0838350:intron | 50.0% | |
| ! | GTACTTCCCTGATGGATGGA+AGG | + | chr5_4:12717820-12717839 | None:intergenic | 50.0% |
| CCAAGTACTTCCCTGATGGA+TGG | + | chr5_4:12717824-12717843 | None:intergenic | 50.0% | |
| !! | CCATCCATCAGGGAAGTACT+TGG | - | chr5_4:12717821-12717840 | Msa0838350:intron | 50.0% |
| CTGCTAGCGATGACAAGACA+TGG | - | chr5_4:12717847-12717866 | Msa0838350:intron | 50.0% | |
| CTAGCGATGACAAGACATGG+AGG | - | chr5_4:12717850-12717869 | Msa0838350:intron | 50.0% | |
| ATGGGACGTTGAAACAGGAG+AGG | - | chr5_4:12717875-12717894 | Msa0838350:intron | 50.0% | |
| GGATCGTTAGCAGCATCTTG+TGG | - | chr5_4:12717957-12717976 | Msa0838350:intron | 50.0% | |
| ! | AAGATGCTCTGGCTCGTGTA+TGG | - | chr5_4:12717982-12718001 | Msa0838350:intron | 50.0% |
| ! | AGATGCTCTGGCTCGTGTAT+GGG | - | chr5_4:12717983-12718002 | Msa0838350:intron | 50.0% |
| GGATATCATTTAGCCACCGG+TGG | - | chr5_4:12718182-12718201 | Msa0838350:intron | 50.0% | |
| AGTGTTATCTTCACCACCGG+TGG | + | chr5_4:12718198-12718217 | None:intergenic | 50.0% | |
| GTGAGCGGGAATGGTGTATA+AGG | + | chr5_4:12718252-12718271 | None:intergenic | 50.0% | |
| ! | GCCACAGGAGGGTTTCTTTT+TGG | - | chr5_4:12718301-12718320 | Msa0838350:CDS | 50.0% |
| AGTTCCGTGGATGTTCTTGG+AGG | - | chr5_4:12718522-12718541 | Msa0838350:CDS | 50.0% | |
| CCTACCTCCAAGAACATCCA+CGG | + | chr5_4:12718529-12718548 | None:intergenic | 50.0% | |
| GTGAAGGCAGATCATAGGTG+AGG | + | chr5_4:12718664-12718683 | None:intergenic | 50.0% | |
| !! | TTTTCGGGGAAAACTTCCCC+TGG | - | chr5_4:12718815-12718834 | Msa0838350:CDS | 50.0% |
| CCTTCATGCCGTAGACTAAG+GGG | - | chr5_4:12718896-12718915 | Msa0838350:CDS | 50.0% | |
| ATGCCGTAGACTAAGGGGTA+AGG | - | chr5_4:12718901-12718920 | Msa0838350:CDS | 50.0% | |
| !! | ACATGGGCTGGTCTAAGTTG+TGG | + | chr5_4:12719338-12719357 | None:intergenic | 50.0% |
| AAAGAGCTCGTAACATGGGC+TGG | + | chr5_4:12719350-12719369 | None:intergenic | 50.0% | |
| ! | TGGTCACTGCAGTGCTCTTT+TGG | + | chr5_4:12719404-12719423 | None:intergenic | 50.0% |
| CAAACGCAACAACAGGCACA+TGG | + | chr5_4:12719803-12719822 | None:intergenic | 50.0% | |
| CATGTGCCTGTTGTTGCGTT+TGG | - | chr5_4:12719801-12719820 | Msa0838350:CDS | 50.0% | |
| CAGTTCCCAAACGCAACAAC+AGG | + | chr5_4:12719810-12719829 | None:intergenic | 50.0% | |
| CAGAAGAGAGTAGACTGGCG+AGG | - | chr5_4:12716952-12716971 | Msa0838350:intron | 55.0% | |
| GCGACAGGAGAAAACGATGC+AGG | - | chr5_4:12716977-12716996 | Msa0838350:intron | 55.0% | |
| CGATGCAGGACCTCATGATG+AGG | - | chr5_4:12716991-12717010 | Msa0838350:intron | 55.0% | |
| TGCAGGACCTCATGATGAGG+AGG | - | chr5_4:12716994-12717013 | Msa0838350:intron | 55.0% | |
| GCTCACCAAGATGGCGAAGA+TGG | + | chr5_4:12717067-12717086 | None:intergenic | 55.0% | |
| CCATCTCCCTCTCCCTAAAG+AGG | + | chr5_4:12717097-12717116 | None:intergenic | 55.0% | |
| ! | CCTCTTTAGGGAGAGGGAGA+TGG | - | chr5_4:12717094-12717113 | Msa0838350:intron | 55.0% |
| TGGAGAGACGAGACAGGTTG+CGG | - | chr5_4:12717114-12717133 | Msa0838350:intron | 55.0% | |
| ATGGCAAAGCTGGATGCCGA+TGG | - | chr5_4:12717143-12717162 | Msa0838350:intron | 55.0% | |
| CATTGCGTATCCAACGTGCC+CGG | - | chr5_4:12717330-12717349 | Msa0838350:intron | 55.0% | |
| GGGGATGTTCAGCGACTTAC+TGG | - | chr5_4:12717446-12717465 | Msa0838350:intron | 55.0% | |
| TAGCAACTGCCTCTGCTGAC+CGG | - | chr5_4:12717718-12717737 | Msa0838350:intron | 55.0% | |
| TGGAAGGCAATGCGTGCAAG+AGG | + | chr5_4:12717804-12717823 | None:intergenic | 55.0% | |
| CGCATTGCCTTCCATCCATC+AGG | - | chr5_4:12717810-12717829 | Msa0838350:intron | 55.0% | |
| GTGCCCAAGTACTTCCCTGA+TGG | + | chr5_4:12717828-12717847 | None:intergenic | 55.0% | |
| ! | AACCTCAGGTTTGGTCAGGC+CGG | - | chr5_4:12718454-12718473 | Msa0838350:intron | 55.0% |
| CCGTGGATGTTCTTGGAGGT+AGG | - | chr5_4:12718526-12718545 | Msa0838350:CDS | 55.0% | |
| CCCCTTAGTCTACGGCATGA+AGG | + | chr5_4:12718899-12718918 | None:intergenic | 55.0% | |
| CAGCACGCCTCCTCATCATG+AGG | + | chr5_4:12717004-12717023 | None:intergenic | 60.0% | |
| AGGGCCCATCTTCGCCATCT+TGG | - | chr5_4:12717059-12717078 | Msa0838350:intron | 60.0% | |
| GGGAGATGGAGAGACGAGAC+AGG | - | chr5_4:12717108-12717127 | Msa0838350:intron | 60.0% | |
| CTCTTCTTCTCCGGGCACGT+TGG | + | chr5_4:12717343-12717362 | None:intergenic | 60.0% | |
| GGTTGCTCGTTCTCCCGTGA+TGG | - | chr5_4:12717467-12717486 | Msa0838350:intron | 60.0% | |
| !! | GTTTGCTGTCCGGTCAGCAG+AGG | + | chr5_4:12717730-12717749 | None:intergenic | 60.0% |
| ! | ACCTCAGGTTTGGTCAGGCC+GGG | - | chr5_4:12718455-12718474 | Msa0838350:intron | 60.0% |
| TAGACTGGCGAGGGAGCGAC+AGG | - | chr5_4:12716962-12716981 | Msa0838350:intron | 65.0% | |
| GCTGGATGCCGATGGACAGC+TGG | - | chr5_4:12717151-12717170 | Msa0838350:intron | 65.0% | |
| !! | ACGCTCGGTGTGCCCCTTGA+AGG | + | chr5_4:12717658-12717677 | None:intergenic | 65.0% |
| TCCCGGCCTGACCAAACCTG+AGG | + | chr5_4:12718459-12718478 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 12716488 | 12720352 | 12716488 | ID=Msa0838350;Name=Msa0838350 |
| chr5_4 | mRNA | 12716488 | 12720352 | 12716488 | ID=Msa0838350-mRNA-1;Parent=Msa0838350;Name=Msa0838350-mRNA-1;_AED=0.12;_eAED=0.12;_QI=55|1|1|1|0.8|0.66|6|275|473 |
| chr5_4 | exon | 12716488 | 12716854 | 12716488 | ID=Msa0838350-mRNA-1:exon:5655;Parent=Msa0838350-mRNA-1 |
| chr5_4 | exon | 12718297 | 12718378 | 12718297 | ID=Msa0838350-mRNA-1:exon:5654;Parent=Msa0838350-mRNA-1 |
| chr5_4 | exon | 12718488 | 12718685 | 12718488 | ID=Msa0838350-mRNA-1:exon:5653;Parent=Msa0838350-mRNA-1 |
| chr5_4 | exon | 12718785 | 12719241 | 12718785 | ID=Msa0838350-mRNA-1:exon:5652;Parent=Msa0838350-mRNA-1 |
| chr5_4 | exon | 12719333 | 12719930 | 12719333 | ID=Msa0838350-mRNA-1:exon:5651;Parent=Msa0838350-mRNA-1 |
| chr5_4 | exon | 12720303 | 12720352 | 12720303 | ID=Msa0838350-mRNA-1:exon:5650;Parent=Msa0838350-mRNA-1 |
| chr5_4 | five_prime_UTR | 12720303 | 12720352 | 12720303 | ID=Msa0838350-mRNA-1:five_prime_utr;Parent=Msa0838350-mRNA-1 |
| chr5_4 | five_prime_UTR | 12719926 | 12719930 | 12719926 | ID=Msa0838350-mRNA-1:five_prime_utr;Parent=Msa0838350-mRNA-1 |
| chr5_4 | CDS | 12719333 | 12719925 | 12719333 | ID=Msa0838350-mRNA-1:cds;Parent=Msa0838350-mRNA-1 |
| chr5_4 | CDS | 12718785 | 12719241 | 12718785 | ID=Msa0838350-mRNA-1:cds;Parent=Msa0838350-mRNA-1 |
| chr5_4 | CDS | 12718488 | 12718685 | 12718488 | ID=Msa0838350-mRNA-1:cds;Parent=Msa0838350-mRNA-1 |
| chr5_4 | CDS | 12718297 | 12718378 | 12718297 | ID=Msa0838350-mRNA-1:cds;Parent=Msa0838350-mRNA-1 |
| chr5_4 | CDS | 12716763 | 12716854 | 12716763 | ID=Msa0838350-mRNA-1:cds;Parent=Msa0838350-mRNA-1 |
| chr5_4 | three_prime_UTR | 12716488 | 12716762 | 12716488 | ID=Msa0838350-mRNA-1:three_prime_utr;Parent=Msa0838350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
