AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1292730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1292730 MtrunA17_Chr8g0367981 96.262 321 11 1 1 320 1 321 0.0 632
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1292730 AT3G26580.1 56.410 351 121 5 1 320 1 350 1.34e-129 374

Find 106 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAAAGCTGAAGAGTATT+TGG 0.185288 8_3:+49264243 Msa1292730:CDS
ATACCAAGATCTACATTATT+TGG 0.191918 8_3:+49265652 Msa1292730:CDS
GCAATCCTTATGGCGATTAT+TGG 0.215703 8_3:-49265838 None:intergenic
AGTGATGAGGAGGGAGGGTT+AGG 0.246902 8_3:+49264151 Msa1292730:CDS
TGCAGAACTTCGTTACATTT+TGG 0.260230 8_3:+49265920 Msa1292730:CDS
TGAAGAGTATTTGGAGAGTA+AGG 0.278180 8_3:+49264252 Msa1292730:CDS
GATTTGGGTAAGAAAGCTTA+TGG 0.281355 8_3:+49265577 Msa1292730:CDS
GTGAATTTCAGATACAAATA+TGG 0.289294 8_3:+49265796 Msa1292730:intron
AGCTCAGTTGATGTATGATT+TGG 0.292561 8_3:+49265561 Msa1292730:CDS
TCTGGATTGGTTTGACCATA+TGG 0.296598 8_3:+49268816 Msa1292730:CDS
TGGAGACCTCCTGCTGGATT+AGG 0.310419 8_3:+49268779 Msa1292730:CDS
AAATTAGAATCGTCATAAAT+TGG 0.310654 8_3:-49268909 None:intergenic
GTGATGAGGAGGGAGGGTTA+GGG 0.320217 8_3:+49264152 Msa1292730:CDS
AAGAGAAGAGGATGAGAGTT+AGG 0.351749 8_3:+49264302 Msa1292730:CDS
GTATAGTCACCATCTCTTCT+TGG 0.352541 8_3:-49265965 None:intergenic
TCTAGTTGCAGTTGTAGTTA+TGG 0.360169 8_3:+49264043 Msa1292730:CDS
AATTATTGTATGTCACAAAT+AGG 0.362264 8_3:+49268981 Msa1292730:three_prime_UTR
TCTTGGGTTATCTTGAGCTT+TGG 0.386466 8_3:-49265948 None:intergenic
GGAGACCTCCTGCTGGATTA+GGG 0.406684 8_3:+49268780 Msa1292730:CDS
TATAGTCACCATCTCTTCTT+GGG 0.408773 8_3:-49265964 None:intergenic
TTATCTTTAGATGATGGAAA+TGG 0.418345 8_3:-49268737 None:intergenic
CTGTCGAGAGTTAAGCTTCG+TGG 0.419384 8_3:-49263983 None:intergenic
CTTGTGTGGAGACCTCCTGC+TGG 0.426709 8_3:+49268773 Msa1292730:CDS
TGACGTTTGATGCTAATACT+AGG 0.431805 8_3:-49265894 None:intergenic
GCTCAGTTGATGTATGATTT+GGG 0.432267 8_3:+49265562 Msa1292730:CDS
TGTGGTTGTAGTAACTTGTA+AGG 0.434312 8_3:-49263850 None:intergenic
AAAGAGCAATGCAATCCTTA+TGG 0.434951 8_3:-49265848 None:intergenic
GATGGCTATGGGATATTTGT+CGG 0.436053 8_3:-49263822 None:intergenic
TTTCAAGAGGACAACCAAAC+GGG 0.436721 8_3:-49269030 None:intergenic
TGGAGAAGTGGAACTCTGTA+TGG 0.438134 8_3:-49268889 None:intergenic
CCACCAAATAATGTAGATCT+TGG 0.439479 8_3:-49265655 None:intergenic
AGTTAGGAAAGAGCTTGAAA+AGG 0.442833 8_3:+49264318 Msa1292730:CDS
ACCATATGGTTGGTATTAGT+TGG 0.445104 8_3:+49268830 Msa1292730:CDS
ATTTGGGTAAGAAAGCTTAT+GGG 0.445943 8_3:+49265578 Msa1292730:CDS
TCCACCATGGCTGTAAGCTT+AGG 0.453178 8_3:+49263929 Msa1292730:exon
ATGGCTGGCTATGGCTTATG+AGG 0.453962 8_3:+49265815 Msa1292730:CDS
TGAAGATATGTCGAGGAGTA+AGG 0.455683 8_3:-49263960 None:intergenic
GGTGCGTGGACGAGTGGTGG+TGG 0.460574 8_3:+49264078 Msa1292730:CDS
GTCATAACTAGAACCAATCA+AGG 0.468929 8_3:-49265988 None:intergenic
ATGGTGACTATACCCTTGAT+TGG 0.471938 8_3:+49265975 Msa1292730:CDS
GGACGAGTGGTGGTGGCACG+TGG 0.472990 8_3:+49264085 Msa1292730:CDS
GAGGAGGGAGGGTTAGGGGA+AGG 0.478148 8_3:+49264157 Msa1292730:CDS
TGATGAGGAGGGAGGGTTAG+GGG 0.489025 8_3:+49264153 Msa1292730:CDS
ATATGTCGAGGAGTAAGGTT+AGG 0.490226 8_3:-49263955 None:intergenic
CGTGCCGTTGAGTTTCTTGA+AGG 0.493680 8_3:+49265616 Msa1292730:CDS
TTGGAGAGTAAGGGTGATGA+TGG 0.493963 8_3:+49264262 Msa1292730:CDS
GACGTTTGATGCTAATACTA+GGG 0.495643 8_3:-49265893 None:intergenic
ATCTACATTATTTGGTGGTG+AGG 0.501114 8_3:+49265660 Msa1292730:CDS
TACAATCTTGTAATTTCAAG+AGG 0.502832 8_3:-49269043 None:intergenic
GAGAAGCTGCCACACGTCAC+TGG 0.502838 8_3:+49263772 None:intergenic
CGGGGAGGTGCGTGGACGAG+TGG 0.507532 8_3:+49264072 Msa1292730:CDS
CAGAGAGTGATGAGGAGGGA+GGG 0.507705 8_3:+49264146 Msa1292730:CDS
TGTAAGGAAGAAGATGGCTA+TGG 0.510587 8_3:-49263834 None:intergenic
TGATTGGTTCTAGTTATGAC+AGG 0.513314 8_3:+49265991 Msa1292730:CDS
GTTGTAGTTATGGTTGTGAC+GGG 0.518114 8_3:+49264053 Msa1292730:CDS
ACCAACTAATACCAACCATA+TGG 0.521837 8_3:-49268831 None:intergenic
GAATCAGGTGGCTAAGGAGC+AGG 0.526095 8_3:+49265522 Msa1292730:intron
CCAAGATCTACATTATTTGG+TGG 0.527272 8_3:+49265655 Msa1292730:CDS
ATTTCAAGAGGACAACCAAA+CGG 0.528286 8_3:-49269031 None:intergenic
TGGAAAAGAGAGAAGAAAGA+AGG 0.529382 8_3:-49263910 None:intergenic
TCAGAGAGTGATGAGGAGGG+AGG 0.531390 8_3:+49264145 Msa1292730:CDS
AAGAGAGTGAGGAAGAGAAG+AGG 0.534892 8_3:+49264290 Msa1292730:CDS
GCTTATGGGAGAGGCACGTA+TGG 0.534948 8_3:+49265592 Msa1292730:CDS
GATTGGTTTGACCATATGGT+TGG 0.535883 8_3:+49268820 Msa1292730:CDS
TAAGGAGCAGGCAGAGAGGA+GGG 0.539752 8_3:+49265534 Msa1292730:CDS
GGTAAGAAAGCTTATGGGAG+AGG 0.539832 8_3:+49265583 Msa1292730:CDS
ATCGTCATAAATTGGAGAAG+TGG 0.540050 8_3:-49268901 None:intergenic
GCAGTAACGTGGAAATGTGT+AGG 0.542502 8_3:-49263795 None:intergenic
TGAGGCCAATAATCGCCATA+AGG 0.547038 8_3:+49265833 Msa1292730:CDS
TGATTCAGAGAGTGATGAGG+AGG 0.547421 8_3:+49264141 Msa1292730:CDS
GTTTCCTAAGCTTACAGCCA+TGG 0.550071 8_3:-49263933 None:intergenic
TAATGTAGATCTTGGTATGA+TGG 0.552370 8_3:-49265647 None:intergenic
ATTTCAGATACAAATATGGC+TGG 0.553752 8_3:+49265800 Msa1292730:intron
GAAGAGTATTTGGAGAGTAA+GGG 0.556657 8_3:+49264253 Msa1292730:CDS
AAAGATAAGGAGGAGAGTGA+AGG 0.561760 8_3:+49264195 Msa1292730:CDS
TGATGGTGAGGAAGAGAGTG+AGG 0.565673 8_3:+49264279 Msa1292730:CDS
GTAACTTGTAAGGAAGAAGA+TGG 0.566115 8_3:-49263840 None:intergenic
GATACAAATATGGCTGGCTA+TGG 0.569208 8_3:+49265806 Msa1292730:intron
TCTGTAGTTATGCGGGAACA+TGG 0.570481 8_3:+49268672 Msa1292730:intron
GAGTGAAGGAGTTTGAAGAG+AGG 0.570724 8_3:+49264209 Msa1292730:CDS
GGCACGTGGGAAGTCAAACT+CGG 0.571416 8_3:+49264099 Msa1292730:CDS
GGAGGTGCGTGGACGAGTGG+TGG 0.571735 8_3:+49264075 Msa1292730:CDS
AAGTCAAACTCGGAGCAGAA+TGG 0.574039 8_3:+49264109 Msa1292730:CDS
CAAGATAACCCAAGAAGAGA+TGG 0.579385 8_3:+49265956 Msa1292730:CDS
GGTTGTGACGGGGAGGTGCG+TGG 0.579587 8_3:+49264064 Msa1292730:CDS
GTAAGGAAGAAGATGGCTAT+GGG 0.582455 8_3:-49263833 None:intergenic
GATTCAGAGAGTGATGAGGA+GGG 0.583330 8_3:+49264142 Msa1292730:CDS
CTAAGGAGCAGGCAGAGAGG+AGG 0.584864 8_3:+49265533 Msa1292730:CDS
AGTTGTAGTTATGGTTGTGA+CGG 0.586135 8_3:+49264052 Msa1292730:CDS
TTTGACGAATCAGGTGGCTA+AGG 0.599329 8_3:+49265516 Msa1292730:intron
TTGAGAGGTAACGTGAGAAG+AGG 0.599921 8_3:-49264010 None:intergenic
CTAGAAGAGTCTCTCTTGAG+AGG 0.611393 8_3:-49264025 None:intergenic
GAGTAAGGGTGATGATGGTG+AGG 0.618593 8_3:+49264267 Msa1292730:CDS
TCCTAAGCTTACAGCCATGG+TGG 0.632513 8_3:-49263930 None:intergenic
CTTTGATTCAGAGAGTGATG+AGG 0.635451 8_3:+49264138 Msa1292730:CDS
TGCACCTTCAAGAAACTCAA+CGG 0.650398 8_3:-49265620 None:intergenic
ATCATACATCAACTGAGCTG+TGG 0.650968 8_3:-49265557 None:intergenic
TAGTTATGGTTGTGACGGGG+AGG 0.664653 8_3:+49264057 Msa1292730:CDS
AAACTCGGAGCAGAATGGAG+TGG 0.664807 8_3:+49264114 Msa1292730:CDS
TCATAACTAGAACCAATCAA+GGG 0.666833 8_3:-49265987 None:intergenic
GACGAGTGGTGGTGGCACGT+GGG 0.673216 8_3:+49264086 Msa1292730:CDS
TGGCTAAGGAGCAGGCAGAG+AGG 0.675876 8_3:+49265530 Msa1292730:CDS
TTCAAGAGGACAACCAAACG+GGG 0.676462 8_3:-49269029 None:intergenic
TTGTAGTTATGGTTGTGACG+GGG 0.676501 8_3:+49264054 Msa1292730:CDS
TTCGTGGTGAAGATATGTCG+AGG 0.678789 8_3:-49263967 None:intergenic
ATGTGTAGGCCAGTGACGTG+TGG 0.697604 8_3:-49263781 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAGCAATTTTTTATTTTTT+AGG + chr8_3:49264830-49264849 Msa1292730:intron 10.0%
!! ATTTATAATATAATTGTTGA+AGG - chr8_3:49267822-49267841 None:intergenic 10.0%
!!! AATTTTGTAGTTTTTGTTTT+TGG + chr8_3:49264468-49264487 Msa1292730:intron 15.0%
!!! TGTCTTATTAAAATTAACTA+AGG + chr8_3:49266354-49266373 Msa1292730:intron 15.0%
!!! TTTTTGACAAAAAATATTGT+AGG + chr8_3:49267125-49267144 Msa1292730:intron 15.0%
!!! TTTTGACAAAAAATATTGTA+GGG + chr8_3:49267126-49267145 Msa1292730:intron 15.0%
!!! ATATTGGTTAAAAATATCAA+TGG - chr8_3:49267690-49267709 None:intergenic 15.0%
!! ATAATGATAATAAGAAATGA+TGG - chr8_3:49268377-49268396 None:intergenic 15.0%
!! ATTTCTTATTATCATTATCA+GGG + chr8_3:49268379-49268398 Msa1292730:intron 15.0%
!! TAAACAGTAGTTTAGTATTT+AGG - chr8_3:49264499-49264518 None:intergenic 20.0%
!! TAACAAGGATAATTTCTTAA+AGG + chr8_3:49264517-49264536 Msa1292730:intron 20.0%
!! GATGTATATGATCTATATTA+TGG - chr8_3:49264882-49264901 None:intergenic 20.0%
!! CATATACATCATTTATTCAA+CGG + chr8_3:49264892-49264911 Msa1292730:intron 20.0%
!!! TTTTTGACTAATTTGTTGAT+TGG + chr8_3:49264989-49265008 Msa1292730:intron 20.0%
!!! AGATGGATTGTAATATTATA+TGG + chr8_3:49265201-49265220 Msa1292730:intron 20.0%
!!! AATAACTATTCTTGGTTTTT+TGG + chr8_3:49265229-49265248 Msa1292730:intron 20.0%
!! TTGCTTACAAATATTTGTTT+AGG - chr8_3:49265408-49265427 None:intergenic 20.0%
!!! GATTCTTATTTAGTTAAGAA+TGG - chr8_3:49265691-49265710 None:intergenic 20.0%
!!! TTAGATGATAATGTTCATAA+TGG + chr8_3:49266153-49266172 Msa1292730:intron 20.0%
!! ATCAATGATAAACTTAAGTA+TGG + chr8_3:49266263-49266282 Msa1292730:intron 20.0%
!!! GCTATTTATTTTTAGTGAAT+TGG + chr8_3:49266498-49266517 Msa1292730:intron 20.0%
!!! AATAGAGACTATATAGATTT+TGG + chr8_3:49266772-49266791 Msa1292730:intron 20.0%
!!! ATAGAGACTATATAGATTTT+GGG + chr8_3:49266773-49266792 Msa1292730:intron 20.0%
!!! AACAGCTAATACATATTTTT+TGG - chr8_3:49266851-49266870 None:intergenic 20.0%
!! AGTATTTCAATAATCTCTTT+AGG - chr8_3:49266921-49266940 None:intergenic 20.0%
!! GACTTATAAACAACTTATTT+GGG - chr8_3:49267024-49267043 None:intergenic 20.0%
!! TGACTTATAAACAACTTATT+TGG - chr8_3:49267025-49267044 None:intergenic 20.0%
!! TTACAACCTATAAATATTGT+AGG + chr8_3:49267095-49267114 Msa1292730:intron 20.0%
!! TTTGACAAAAAATATTGTAG+GGG + chr8_3:49267127-49267146 Msa1292730:intron 20.0%
!! ACATAATTAGGCAAATTATT+AGG - chr8_3:49267215-49267234 None:intergenic 20.0%
!! ATTATACTTTATGTTAATGC+CGG - chr8_3:49267243-49267262 None:intergenic 20.0%
!! TTCATATCAAACATATTGTA+AGG + chr8_3:49267978-49267997 Msa1292730:intron 20.0%
!! TCATATCAAACATATTGTAA+GGG + chr8_3:49267979-49267998 Msa1292730:intron 20.0%
!!! CAAATTTTAGTATATTGGTT+AGG - chr8_3:49268101-49268120 None:intergenic 20.0%
!! AAGAATGCAATTATCAATTA+TGG + chr8_3:49268325-49268344 Msa1292730:intron 20.0%
!! CATTTCTTATTATCATTATC+AGG + chr8_3:49268378-49268397 Msa1292730:intron 20.0%
!!! TAATGAAAGTTCTTTTCATA+GGG - chr8_3:49268508-49268527 None:intergenic 20.0%
!!! ATATATACTTGTTTTTATGC+TGG + chr8_3:49268555-49268574 Msa1292730:intron 20.0%
!! AAAAAGTTATCTTTAGATGA+TGG - chr8_3:49268746-49268765 None:intergenic 20.0%
!!! ATCATCTAAAGATAACTTTT+TGG + chr8_3:49268745-49268764 Msa1292730:CDS 20.0%
!! AAATTAGAATCGTCATAAAT+TGG - chr8_3:49268912-49268931 None:intergenic 20.0%
!! AATTATTGTATGTCACAAAT+AGG + chr8_3:49268981-49269000 Msa1292730:three_prime_UTR 20.0%
!! AGAAGTGAAGATATTTTATG+TGG - chr8_3:49263871-49263890 None:intergenic 25.0%
!!! ATGATTTTGAGACAAAGATA+AGG + chr8_3:49264182-49264201 Msa1292730:CDS 25.0%
!!! TGTAGTTTTTGTTTTTGGAA+AGG + chr8_3:49264473-49264492 Msa1292730:intron 25.0%
! TACTAAACTACTGTTTAACA+AGG + chr8_3:49264502-49264521 Msa1292730:intron 25.0%
! CAGTTATGAGAAAATCATTT+GGG - chr8_3:49264576-49264595 None:intergenic 25.0%
! ACAGTTATGAGAAAATCATT+TGG - chr8_3:49264577-49264596 None:intergenic 25.0%
! CATTGAATAAATGATGTATG+TGG + chr8_3:49264855-49264874 Msa1292730:intron 25.0%
! GTGTATGTAAAGAAAACAAA+AGG - chr8_3:49265090-49265109 None:intergenic 25.0%
!!! GTTTTCATACTTTTTGTTTG+AGG + chr8_3:49265284-49265303 Msa1292730:intron 25.0%
! ATACCAAGATCTACATTATT+TGG + chr8_3:49265652-49265671 Msa1292730:CDS 25.0%
! GTGAATTTCAGATACAAATA+TGG + chr8_3:49265796-49265815 Msa1292730:intron 25.0%
! GAAGAATGTGATAAACAAAA+AGG - chr8_3:49266057-49266076 None:intergenic 25.0%
! AATGTTCATAATGGCATAAT+AGG + chr8_3:49266162-49266181 Msa1292730:intron 25.0%
!! TAACAATCATTCTAAGAACT+TGG - chr8_3:49266333-49266352 None:intergenic 25.0%
!!! TTTTGAAATGGTCATAAACT+AGG + chr8_3:49266442-49266461 Msa1292730:intron 25.0%
! TCACTAAAAATAAATAGCAC+TGG - chr8_3:49266496-49266515 None:intergenic 25.0%
!!! GATTTGTTTTCTGTCTATAT+AGG - chr8_3:49266735-49266754 None:intergenic 25.0%
!! TAGAGACTATATAGATTTTG+GGG + chr8_3:49266774-49266793 Msa1292730:intron 25.0%
!!! AATCTCTTTAGGATAACTTA+TGG - chr8_3:49266910-49266929 None:intergenic 25.0%
! GATTCTCCTACAATATTTAT+AGG - chr8_3:49267104-49267123 None:intergenic 25.0%
! TTGTATCTATACAAACTAAG+TGG + chr8_3:49267426-49267445 Msa1292730:intron 25.0%
! GTTGGAAAACTCAAAAATAT+TGG - chr8_3:49267706-49267725 None:intergenic 25.0%
! CATATCAAACATATTGTAAG+GGG + chr8_3:49267980-49267999 Msa1292730:intron 25.0%
! ATATCAAACATATTGTAAGG+GGG + chr8_3:49267981-49268000 Msa1292730:intron 25.0%
!!! CGAGACAAATTTTAGTATAT+TGG - chr8_3:49268106-49268125 None:intergenic 25.0%
!! ACATTGTTTGTTAAATGTTG+GGG - chr8_3:49268133-49268152 None:intergenic 25.0%
!! GACATTGTTTGTTAAATGTT+GGG - chr8_3:49268134-49268153 None:intergenic 25.0%
!! TGACATTGTTTGTTAAATGT+TGG - chr8_3:49268135-49268154 None:intergenic 25.0%
!! CTAATGAAAGTTCTTTTCAT+AGG - chr8_3:49268509-49268528 None:intergenic 25.0%
!! TTTTTACATCTGTAGTTATG+CGG + chr8_3:49268664-49268683 Msa1292730:intron 25.0%
!!! TTATCTTTAGATGATGGAAA+TGG - chr8_3:49268740-49268759 None:intergenic 25.0%
!! CATACAATAATTTTACAGCA+TGG - chr8_3:49268973-49268992 None:intergenic 25.0%
!! TTTTATTATATTTCCCCGTT+TGG + chr8_3:49269016-49269035 Msa1292730:three_prime_UTR 25.0%
! TACAATCTTGTAATTTCAAG+AGG - chr8_3:49269046-49269065 None:intergenic 25.0%
!!! GAAGGTTTTGAATGTTGAAA+AGG - chr8_3:49263895-49263914 None:intergenic 30.0%
!!! ATTTTGAGACAAAGATAAGG+AGG + chr8_3:49264185-49264204 Msa1292730:CDS 30.0%
AACTATTACATATGAGACAG+AGG - chr8_3:49264423-49264442 None:intergenic 30.0%
! ATCTTTTTGTTGGGACTTAT+GGG - chr8_3:49264771-49264790 None:intergenic 30.0%
TGCTTATAATTGAGACTAGA+GGG - chr8_3:49264816-49264835 None:intergenic 30.0%
TTGCTTATAATTGAGACTAG+AGG - chr8_3:49264817-49264836 None:intergenic 30.0%
TGTCAGTTGTCTAATGATAA+AGG - chr8_3:49265145-49265164 None:intergenic 30.0%
CTAGAAGTGAAACATTAAGA+TGG + chr8_3:49265184-49265203 Msa1292730:intron 30.0%
TGGTGCATAATAACTATTCT+TGG + chr8_3:49265221-49265240 Msa1292730:intron 30.0%
ATTTGGGTAAGAAAGCTTAT+GGG + chr8_3:49265578-49265597 Msa1292730:CDS 30.0%
TAATGTAGATCTTGGTATGA+TGG - chr8_3:49265650-49265669 None:intergenic 30.0%
ATTTCAGATACAAATATGGC+TGG + chr8_3:49265800-49265819 Msa1292730:intron 30.0%
TCATAACTAGAACCAATCAA+GGG - chr8_3:49265990-49266009 None:intergenic 30.0%
! TGTTTCCATTTCTTTGTTGT+TGG + chr8_3:49266115-49266134 Msa1292730:intron 30.0%
TCTTACCAACAACAAAGAAA+TGG - chr8_3:49266123-49266142 None:intergenic 30.0%
!! AAAGCATGCTTTAATTTGTG+TGG - chr8_3:49266224-49266243 None:intergenic 30.0%
ATGGTCATAAACTAGGAATT+AGG + chr8_3:49266449-49266468 Msa1292730:intron 30.0%
!! AAAAATAAATAGCACTGGCA+TGG - chr8_3:49266491-49266510 None:intergenic 30.0%
! GTATGTCTTGACTTTTATCA+TGG - chr8_3:49266549-49266568 None:intergenic 30.0%
AAAGTCAAGACATACGATTT+AGG + chr8_3:49266554-49266573 Msa1292730:intron 30.0%
AAGTCAAGACATACGATTTA+GGG + chr8_3:49266555-49266574 Msa1292730:intron 30.0%
! AGAGACTATATAGATTTTGG+GGG + chr8_3:49266775-49266794 Msa1292730:intron 30.0%
!! TAGCTGTTTCTCTATAAACA+AGG + chr8_3:49266863-49266882 Msa1292730:intron 30.0%
CTATAAACAAGGAGAAAATG+TGG + chr8_3:49266874-49266893 Msa1292730:intron 30.0%
ATTAGGCAAATTATTAGGTC+TGG - chr8_3:49267210-49267229 None:intergenic 30.0%
!!! TCCTGATTTTTTTTAGCTGA+TGG + chr8_3:49267536-49267555 Msa1292730:intron 30.0%
!! GAATAATGAATGTTGGTGAT+TGG - chr8_3:49267800-49267819 None:intergenic 30.0%
GTTGAAGGAATAATGAATGT+TGG - chr8_3:49267807-49267826 None:intergenic 30.0%
TAGAATGAATTGCATATCAC+TGG + chr8_3:49267841-49267860 Msa1292730:intron 30.0%
AGAATGAATTGCATATCACT+GGG + chr8_3:49267842-49267861 Msa1292730:intron 30.0%
TATGAAGAGAGTAAAGAAGA+TGG - chr8_3:49267964-49267983 None:intergenic 30.0%
CTGGTTGATCTAAGAATTAA+AGG + chr8_3:49268017-49268036 Msa1292730:intron 30.0%
CTAAGAATTAAAGGAGTAGA+AGG + chr8_3:49268026-49268045 Msa1292730:intron 30.0%
TGATGGTAACAAAACCAATA+CGG - chr8_3:49268360-49268379 None:intergenic 30.0%
TATCATTATCAGGGCTTATT+CGG + chr8_3:49268388-49268407 Msa1292730:intron 30.0%
! TTTTACATCTGTAGTTATGC+GGG + chr8_3:49268665-49268684 Msa1292730:intron 30.0%
! GTAACTTGTAAGGAAGAAGA+TGG - chr8_3:49263843-49263862 None:intergenic 35.0%
! TGTGGTTGTAGTAACTTGTA+AGG - chr8_3:49263853-49263872 None:intergenic 35.0%
TGGAAAAGAGAGAAGAAAGA+AGG - chr8_3:49263913-49263932 None:intergenic 35.0%
TCTAGTTGCAGTTGTAGTTA+TGG + chr8_3:49264043-49264062 Msa1292730:CDS 35.0%
AGTTGTAGTTATGGTTGTGA+CGG + chr8_3:49264052-49264071 Msa1292730:CDS 35.0%
!! GAAGAAAGCTGAAGAGTATT+TGG + chr8_3:49264243-49264262 Msa1292730:CDS 35.0%
!! TGAAGAGTATTTGGAGAGTA+AGG + chr8_3:49264252-49264271 Msa1292730:CDS 35.0%
!! GAAGAGTATTTGGAGAGTAA+GGG + chr8_3:49264253-49264272 Msa1292730:CDS 35.0%
AGTTAGGAAAGAGCTTGAAA+AGG + chr8_3:49264318-49264337 Msa1292730:CDS 35.0%
!! AGACAGAGGAGTACTAATTA+AGG - chr8_3:49264409-49264428 None:intergenic 35.0%
AAAACCCGAAAGCAGTTATA+TGG - chr8_3:49264667-49264686 None:intergenic 35.0%
!!! ATATAACTGCTTTCGGGTTT+TGG + chr8_3:49264666-49264685 Msa1292730:intron 35.0%
!!! TATAACTGCTTTCGGGTTTT+GGG + chr8_3:49264667-49264686 Msa1292730:intron 35.0%
CACAAGTATGTCTAGATACT+AGG - chr8_3:49264699-49264718 None:intergenic 35.0%
! TGATCCTCTCTAGTGTTTTA+AGG + chr8_3:49264742-49264761 Msa1292730:intron 35.0%
! GATCTTTTTGTTGGGACTTA+TGG - chr8_3:49264772-49264791 None:intergenic 35.0%
! ACTCTCTCGATCTTTTTGTT+GGG - chr8_3:49264780-49264799 None:intergenic 35.0%
CAAAGTTTCACGATAACAGT+GGG - chr8_3:49265058-49265077 None:intergenic 35.0%
ACAAAGTTTCACGATAACAG+TGG - chr8_3:49265059-49265078 None:intergenic 35.0%
ACTGTTATCGTGAAACTTTG+TGG + chr8_3:49265058-49265077 Msa1292730:intron 35.0%
!! TTCACTTCTAGTGACTTGTT+AGG - chr8_3:49265175-49265194 None:intergenic 35.0%
!! GACCATTATTTTTCTCCTCT+CGG + chr8_3:49265446-49265465 Msa1292730:intron 35.0%
!! ACCATTATTTTTCTCCTCTC+GGG + chr8_3:49265447-49265466 Msa1292730:intron 35.0%
ACTCGTTGACATATTGTTTG+TGG + chr8_3:49265493-49265512 Msa1292730:intron 35.0%
! AGCTCAGTTGATGTATGATT+TGG + chr8_3:49265561-49265580 Msa1292730:CDS 35.0%
! GCTCAGTTGATGTATGATTT+GGG + chr8_3:49265562-49265581 Msa1292730:CDS 35.0%
GATTTGGGTAAGAAAGCTTA+TGG + chr8_3:49265577-49265596 Msa1292730:CDS 35.0%
CCACCAAATAATGTAGATCT+TGG - chr8_3:49265658-49265677 None:intergenic 35.0%
CCAAGATCTACATTATTTGG+TGG + chr8_3:49265655-49265674 Msa1292730:CDS 35.0%
!! ATCTACATTATTTGGTGGTG+AGG + chr8_3:49265660-49265679 Msa1292730:CDS 35.0%
AAAGAGCAATGCAATCCTTA+TGG - chr8_3:49265851-49265870 None:intergenic 35.0%
GACGTTTGATGCTAATACTA+GGG - chr8_3:49265896-49265915 None:intergenic 35.0%
TGACGTTTGATGCTAATACT+AGG - chr8_3:49265897-49265916 None:intergenic 35.0%
! TGCAGAACTTCGTTACATTT+TGG + chr8_3:49265920-49265939 Msa1292730:CDS 35.0%
TATAGTCACCATCTCTTCTT+GGG - chr8_3:49265967-49265986 None:intergenic 35.0%
GTCATAACTAGAACCAATCA+AGG - chr8_3:49265991-49266010 None:intergenic 35.0%
!! TGATTGGTTCTAGTTATGAC+AGG + chr8_3:49265991-49266010 Msa1292730:CDS 35.0%
!! TTTGTTGTTGGTAAGATCAC+TGG + chr8_3:49266127-49266146 Msa1292730:intron 35.0%
GAATGCTTATATCTCTCTAG+TGG - chr8_3:49266311-49266330 None:intergenic 35.0%
! AAAGTCAACCCAAACTTTTG+AGG - chr8_3:49266425-49266444 None:intergenic 35.0%
!!! GTTTGGGTTGACTTTTGAAA+TGG + chr8_3:49266430-49266449 Msa1292730:intron 35.0%
GAAACTGTAAAAGCTCTTTG+AGG + chr8_3:49266577-49266596 Msa1292730:intron 35.0%
GTGAATGTAATCATACGTGT+TGG + chr8_3:49266675-49266694 Msa1292730:intron 35.0%
TCTATATAGGCCTCAAAACT+TGG - chr8_3:49266722-49266741 None:intergenic 35.0%
TTGCCTAATTATGTTCCATC+CGG + chr8_3:49267221-49267240 Msa1292730:intron 35.0%
TACTTTATGTTAATGCCGGA+TGG - chr8_3:49267239-49267258 None:intergenic 35.0%
GTATAATGCGATTATGCTTG+TGG + chr8_3:49267256-49267275 Msa1292730:intron 35.0%
GCGTATAGTTAAAGATGAGA+CGG - chr8_3:49267396-49267415 None:intergenic 35.0%
TGTTAAGATCGTTGTAAAGC+AGG + chr8_3:49267454-49267473 Msa1292730:intron 35.0%
GTTAAGATCGTTGTAAAGCA+GGG + chr8_3:49267455-49267474 Msa1292730:intron 35.0%
!!! TCTATAGTGGGTTTTCACAA+TGG + chr8_3:49267484-49267503 Msa1292730:intron 35.0%
!!! CTATAGTGGGTTTTCACAAT+GGG + chr8_3:49267485-49267504 Msa1292730:intron 35.0%
! TTTTCACAATGGGAATCCAA+AGG + chr8_3:49267495-49267514 Msa1292730:intron 35.0%
TTTCACAATGGGAATCCAAA+GGG + chr8_3:49267496-49267515 Msa1292730:intron 35.0%
GCCATCAGCTAAAAAAAATC+AGG - chr8_3:49267540-49267559 None:intergenic 35.0%
ACAAAACACACATGTACAAC+AGG - chr8_3:49267588-49267607 None:intergenic 35.0%
!! TACATGTGTGTTTTGTTCAG+CGG + chr8_3:49267592-49267611 Msa1292730:intron 35.0%
! GAGCTTCTAAAAATGATGGT+GGG - chr8_3:49267649-49267668 None:intergenic 35.0%
! GTTGGAGCTTCTAAAAATGA+TGG - chr8_3:49267653-49267672 None:intergenic 35.0%
!!! GATTGGTGATTTTAACTGTC+AGG - chr8_3:49267783-49267802 None:intergenic 35.0%
! AAACTTCATCTTTAGGAGAG+TGG + chr8_3:49267901-49267920 Msa1292730:intron 35.0%
AAACATATTGTAAGGGGGTT+GGG + chr8_3:49267986-49268005 Msa1292730:intron 35.0%
AAGGAGTTAGTTAACGATCA+AGG + chr8_3:49268045-49268064 Msa1292730:intron 35.0%
AACATGGAGCGATAAAAACA+AGG + chr8_3:49268688-49268707 Msa1292730:CDS 35.0%
AAAAACAAGGATCGAAAGAG+TGG + chr8_3:49268701-49268720 Msa1292730:CDS 35.0%
AAAAATCGAGCTTTCTGGAT+TGG + chr8_3:49268803-49268822 Msa1292730:CDS 35.0%
! ACCATATGGTTGGTATTAGT+TGG + chr8_3:49268830-49268849 Msa1292730:CDS 35.0%
ACCAACTAATACCAACCATA+TGG - chr8_3:49268834-49268853 None:intergenic 35.0%
ATCGTCATAAATTGGAGAAG+TGG - chr8_3:49268904-49268923 None:intergenic 35.0%
ATTTCAAGAGGACAACCAAA+CGG - chr8_3:49269034-49269053 None:intergenic 35.0%
GATGGCTATGGGATATTTGT+CGG - chr8_3:49263825-49263844 None:intergenic 40.0%
GTAAGGAAGAAGATGGCTAT+GGG - chr8_3:49263836-49263855 None:intergenic 40.0%
TGTAAGGAAGAAGATGGCTA+TGG - chr8_3:49263837-49263856 None:intergenic 40.0%
! TTCTTCTCTCTTTTCCACCA+TGG + chr8_3:49263916-49263935 Msa1292730:exon 40.0%
ATATGTCGAGGAGTAAGGTT+AGG - chr8_3:49263958-49263977 None:intergenic 40.0%
TGAAGATATGTCGAGGAGTA+AGG - chr8_3:49263963-49263982 None:intergenic 40.0%
GTTGTAGTTATGGTTGTGAC+GGG + chr8_3:49264053-49264072 Msa1292730:CDS 40.0%
TTGTAGTTATGGTTGTGACG+GGG + chr8_3:49264054-49264073 Msa1292730:CDS 40.0%
CTTTGATTCAGAGAGTGATG+AGG + chr8_3:49264138-49264157 Msa1292730:CDS 40.0%
AAAGATAAGGAGGAGAGTGA+AGG + chr8_3:49264195-49264214 Msa1292730:CDS 40.0%
AAGAGAAGAGGATGAGAGTT+AGG + chr8_3:49264302-49264321 Msa1292730:CDS 40.0%
GAAGCCTTAAAACACTAGAG+AGG - chr8_3:49264749-49264768 None:intergenic 40.0%
! CACTCTCTCGATCTTTTTGT+TGG - chr8_3:49264781-49264800 None:intergenic 40.0%
ACCCGAGAGGAGAAAAATAA+TGG - chr8_3:49265451-49265470 None:intergenic 40.0%
!! ATTATTTTTCTCCTCTCGGG+TGG + chr8_3:49265450-49265469 Msa1292730:intron 40.0%
GTGGAGGGTGATGATTAAAT+TGG + chr8_3:49265469-49265488 Msa1292730:intron 40.0%
TGTTTGTGGTTTGACGAATC+AGG + chr8_3:49265507-49265526 Msa1292730:intron 40.0%
ATCATACATCAACTGAGCTG+TGG - chr8_3:49265560-49265579 None:intergenic 40.0%
TGCACCTTCAAGAAACTCAA+CGG - chr8_3:49265623-49265642 None:intergenic 40.0%
! GATACAAATATGGCTGGCTA+TGG + chr8_3:49265806-49265825 Msa1292730:intron 40.0%
GCAATCCTTATGGCGATTAT+TGG - chr8_3:49265841-49265860 None:intergenic 40.0%
TCTTGGGTTATCTTGAGCTT+TGG - chr8_3:49265951-49265970 None:intergenic 40.0%
CAAGATAACCCAAGAAGAGA+TGG + chr8_3:49265956-49265975 Msa1292730:CDS 40.0%
GTATAGTCACCATCTCTTCT+TGG - chr8_3:49265968-49265987 None:intergenic 40.0%
ATGGTGACTATACCCTTGAT+TGG + chr8_3:49265975-49265994 Msa1292730:CDS 40.0%
AACCCATTATAGAAAACCGC+AGG + chr8_3:49266388-49266407 Msa1292730:intron 40.0%
ACCCATTATAGAAAACCGCA+GGG + chr8_3:49266389-49266408 Msa1292730:intron 40.0%
! TCCCTGCGGTTTTCTATAAT+GGG - chr8_3:49266393-49266412 None:intergenic 40.0%
TTGTGCCACCTCAAAAGTTT+GGG + chr8_3:49266414-49266433 Msa1292730:intron 40.0%
TGTCAATGTCGTGTCTATGT+CGG - chr8_3:49266620-49266639 None:intergenic 40.0%
ACGACATTGACATTCAATGC+TGG + chr8_3:49266628-49266647 Msa1292730:intron 40.0%
TAATCATACGTGTTGGACAG+CGG + chr8_3:49266682-49266701 Msa1292730:intron 40.0%
!!! ATATAGATTTTGGGGGCGTT+TGG + chr8_3:49266782-49266801 Msa1292730:intron 40.0%
TATTCTGGACTTGGGATGAA+TGG - chr8_3:49267059-49267078 None:intergenic 40.0%
TTGTAACTGCCACAGTATTC+TGG - chr8_3:49267074-49267093 None:intergenic 40.0%
ATGCCGGATGGAACATAATT+AGG - chr8_3:49267227-49267246 None:intergenic 40.0%
CACAAGTGATAGACTGATAG+TGG + chr8_3:49267294-49267313 Msa1292730:intron 40.0%
AATCCAAAGGGATTGCTCTT+AGG + chr8_3:49267508-49267527 Msa1292730:intron 40.0%
ACATGTACAACAGGCAGAAA+AGG - chr8_3:49267579-49267598 None:intergenic 40.0%
! GGAGCTTCTAAAAATGATGG+TGG - chr8_3:49267650-49267669 None:intergenic 40.0%
ATGGAAAAGAAGCTATGCGT+TGG - chr8_3:49267671-49267690 None:intergenic 40.0%
! TTGAGTTTTCCAACCACACT+AGG + chr8_3:49267712-49267731 Msa1292730:intron 40.0%
ATCACTGGGATGACATCAAA+TGG + chr8_3:49267856-49267875 Msa1292730:intron 40.0%
CAAACATATTGTAAGGGGGT+TGG + chr8_3:49267985-49268004 Msa1292730:intron 40.0%
GGTAACAAAACCAATACGGT+AGG - chr8_3:49268356-49268375 None:intergenic 40.0%
GAGACATGTTAGCAAGTAGT+CGG - chr8_3:49268439-49268458 None:intergenic 40.0%
!! ACTTTTTGGACTTGCTTGTG+TGG + chr8_3:49268759-49268778 Msa1292730:CDS 40.0%
TAGGGAAAAATCGAGCTTTC+TGG + chr8_3:49268798-49268817 Msa1292730:CDS 40.0%
!! TCTGGATTGGTTTGACCATA+TGG + chr8_3:49268816-49268835 Msa1292730:CDS 40.0%
!! GATTGGTTTGACCATATGGT+TGG + chr8_3:49268820-49268839 Msa1292730:CDS 40.0%
TTTCAAGAGGACAACCAAAC+GGG - chr8_3:49269033-49269052 None:intergenic 40.0%
GCAGTAACGTGGAAATGTGT+AGG - chr8_3:49263798-49263817 None:intergenic 45.0%
!!! TTGTCGGTTTTGCAGTAACG+TGG - chr8_3:49263809-49263828 None:intergenic 45.0%
GTTTCCTAAGCTTACAGCCA+TGG - chr8_3:49263936-49263955 None:intergenic 45.0%
TTCGTGGTGAAGATATGTCG+AGG - chr8_3:49263970-49263989 None:intergenic 45.0%
TTGAGAGGTAACGTGAGAAG+AGG - chr8_3:49264013-49264032 None:intergenic 45.0%
CTAGAAGAGTCTCTCTTGAG+AGG - chr8_3:49264028-49264047 None:intergenic 45.0%
AAGTCAAACTCGGAGCAGAA+TGG + chr8_3:49264109-49264128 Msa1292730:CDS 45.0%
TGATTCAGAGAGTGATGAGG+AGG + chr8_3:49264141-49264160 Msa1292730:CDS 45.0%
GATTCAGAGAGTGATGAGGA+GGG + chr8_3:49264142-49264161 Msa1292730:CDS 45.0%
GAGTGAAGGAGTTTGAAGAG+AGG + chr8_3:49264209-49264228 Msa1292730:CDS 45.0%
TTGGAGAGTAAGGGTGATGA+TGG + chr8_3:49264262-49264281 Msa1292730:CDS 45.0%
AAGAGAGTGAGGAAGAGAAG+AGG + chr8_3:49264290-49264309 Msa1292730:CDS 45.0%
CCGAAAGCAGTTATATGGCA+GGG - chr8_3:49264662-49264681 None:intergenic 45.0%
CCCTGCCATATAACTGCTTT+CGG + chr8_3:49264659-49264678 Msa1292730:intron 45.0%
CCTGCCATATAACTGCTTTC+GGG + chr8_3:49264660-49264679 Msa1292730:intron 45.0%
CCAACGAGACATCGCTTAAT+TGG - chr8_3:49265112-49265131 None:intergenic 45.0%
CCAATTAAGCGATGTCTCGT+TGG + chr8_3:49265109-49265128 Msa1292730:intron 45.0%
TTGTGGTTTGACGAATCAGG+TGG + chr8_3:49265510-49265529 Msa1292730:intron 45.0%
TTTGACGAATCAGGTGGCTA+AGG + chr8_3:49265516-49265535 Msa1292730:intron 45.0%
GGTAAGAAAGCTTATGGGAG+AGG + chr8_3:49265583-49265602 Msa1292730:CDS 45.0%
TGAGGCCAATAATCGCCATA+AGG + chr8_3:49265833-49265852 Msa1292730:CDS 45.0%
! CTCCCTGCGGTTTTCTATAA+TGG - chr8_3:49266394-49266413 None:intergenic 45.0%
GTTGTGCCACCTCAAAAGTT+TGG + chr8_3:49266413-49266432 Msa1292730:intron 45.0%
!! GTCAACCCAAACTTTTGAGG+TGG - chr8_3:49266422-49266441 None:intergenic 45.0%
! GTCAGTGCTACCAAGTTTTG+AGG + chr8_3:49266709-49266728 Msa1292730:intron 45.0%
ATCCCAAGTCCAGAATACTG+TGG + chr8_3:49267062-49267081 Msa1292730:intron 45.0%
TGCCACAGTATTCTGGACTT+GGG - chr8_3:49267067-49267086 None:intergenic 45.0%
AGCAGGGTAGAGTTCTATAG+TGG + chr8_3:49267471-49267490 Msa1292730:intron 45.0%
GCAGGGTAGAGTTCTATAGT+GGG + chr8_3:49267472-49267491 Msa1292730:intron 45.0%
TAGCCTAAGAGCAATCCCTT+TGG - chr8_3:49267514-49267533 None:intergenic 45.0%
!! ATGTGTGTTTTGTTCAGCGG+TGG + chr8_3:49267595-49267614 Msa1292730:intron 45.0%
!! TCTAAACTCATGATGGCGGT+TGG - chr8_3:49267621-49267640 None:intergenic 45.0%
!! GAGCTCTAAACTCATGATGG+CGG - chr8_3:49267625-49267644 None:intergenic 45.0%
!! GGAGAGCTCTAAACTCATGA+TGG - chr8_3:49267628-49267647 None:intergenic 45.0%
CAGCTTAAGAAGAGGCTTCT+AGG - chr8_3:49267740-49267759 None:intergenic 45.0%
AGAAGCCTCTTCTTAAGCTG+CGG + chr8_3:49267740-49267759 Msa1292730:intron 45.0%
!!! AATGGTTTTTTCCGCAGCTG+TGG + chr8_3:49267874-49267893 Msa1292730:intron 45.0%
!!! ATGGTTTTTTCCGCAGCTGT+GGG + chr8_3:49267875-49267894 Msa1292730:intron 45.0%
TGGGGGCAAACTTCATCTTT+AGG + chr8_3:49267894-49267913 Msa1292730:intron 45.0%
AACGATCAAGGTTCAAACGC+TGG + chr8_3:49268057-49268076 Msa1292730:intron 45.0%
TATGGTTGCTCCTACCGTAT+TGG + chr8_3:49268343-49268362 Msa1292730:intron 45.0%
TCTGTAGTTATGCGGGAACA+TGG + chr8_3:49268672-49268691 Msa1292730:intron 45.0%
! TTTTTCCCTAATCCAGCAGG+AGG - chr8_3:49268788-49268807 None:intergenic 45.0%
! CGATTTTTCCCTAATCCAGC+AGG - chr8_3:49268791-49268810 None:intergenic 45.0%
TGGAGAAGTGGAACTCTGTA+TGG - chr8_3:49268892-49268911 None:intergenic 45.0%
TTCAAGAGGACAACCAAACG+GGG - chr8_3:49269032-49269051 None:intergenic 45.0%
TCCACCATGGCTGTAAGCTT+AGG + chr8_3:49263929-49263948 Msa1292730:exon 50.0%
TCCTAAGCTTACAGCCATGG+TGG - chr8_3:49263933-49263952 None:intergenic 50.0%
CTGTCGAGAGTTAAGCTTCG+TGG - chr8_3:49263986-49264005 None:intergenic 50.0%
! TAGTTATGGTTGTGACGGGG+AGG + chr8_3:49264057-49264076 Msa1292730:CDS 50.0%
AAACTCGGAGCAGAATGGAG+TGG + chr8_3:49264114-49264133 Msa1292730:CDS 50.0%
!! GAGTAAGGGTGATGATGGTG+AGG + chr8_3:49264267-49264286 Msa1292730:CDS 50.0%
! TGATGGTGAGGAAGAGAGTG+AGG + chr8_3:49264279-49264298 Msa1292730:CDS 50.0%
CCCGAAAGCAGTTATATGGC+AGG - chr8_3:49264663-49264682 None:intergenic 50.0%
! ATTTTTCTCCTCTCGGGTGG+AGG + chr8_3:49265453-49265472 Msa1292730:intron 50.0%
! TTTTTCTCCTCTCGGGTGGA+GGG + chr8_3:49265454-49265473 Msa1292730:intron 50.0%
! CGTGCCGTTGAGTTTCTTGA+AGG + chr8_3:49265616-49265635 Msa1292730:CDS 50.0%
! ATGGCTGGCTATGGCTTATG+AGG + chr8_3:49265815-49265834 Msa1292730:CDS 50.0%
CTGCCACAGTATTCTGGACT+TGG - chr8_3:49267068-49267087 None:intergenic 50.0%
TTTAGCTGATGGCTGAGCAG+TGG + chr8_3:49267547-49267566 Msa1292730:intron 50.0%
! TTCTAGGAGCCTAGTGTGGT+TGG - chr8_3:49267724-49267743 None:intergenic 50.0%
TTCTTAAGCTGCGGCCATGA+AGG + chr8_3:49267749-49267768 Msa1292730:intron 50.0%
TCTTAAGCTGCGGCCATGAA+GGG + chr8_3:49267750-49267769 Msa1292730:intron 50.0%
!!! TGGTTTTTTCCGCAGCTGTG+GGG + chr8_3:49267876-49267895 Msa1292730:intron 50.0%
AGGGGGTTGGGTAGTTTAAC+TGG + chr8_3:49267998-49268017 Msa1292730:intron 50.0%
ATGTGTAGGCCAGTGACGTG+TGG - chr8_3:49263784-49263803 None:intergenic 55.0%
GGCACGTGGGAAGTCAAACT+CGG + chr8_3:49264099-49264118 Msa1292730:CDS 55.0%
TCAGAGAGTGATGAGGAGGG+AGG + chr8_3:49264145-49264164 Msa1292730:CDS 55.0%
CAGAGAGTGATGAGGAGGGA+GGG + chr8_3:49264146-49264165 Msa1292730:CDS 55.0%
AGTGATGAGGAGGGAGGGTT+AGG + chr8_3:49264151-49264170 Msa1292730:CDS 55.0%
GTGATGAGGAGGGAGGGTTA+GGG + chr8_3:49264152-49264171 Msa1292730:CDS 55.0%
TGATGAGGAGGGAGGGTTAG+GGG + chr8_3:49264153-49264172 Msa1292730:CDS 55.0%
GAATCAGGTGGCTAAGGAGC+AGG + chr8_3:49265522-49265541 Msa1292730:intron 55.0%
TAAGGAGCAGGCAGAGAGGA+GGG + chr8_3:49265534-49265553 Msa1292730:CDS 55.0%
! GCTTATGGGAGAGGCACGTA+TGG + chr8_3:49265592-49265611 Msa1292730:CDS 55.0%
! AGGCTTCTAGGAGCCTAGTG+TGG - chr8_3:49267728-49267747 None:intergenic 55.0%
CATGGCCGCAGCTTAAGAAG+AGG - chr8_3:49267748-49267767 None:intergenic 55.0%
!!! GGTTTTTTCCGCAGCTGTGG+GGG + chr8_3:49267877-49267896 Msa1292730:intron 55.0%
CAAGGTTCAAACGCTGGCGA+AGG + chr8_3:49268063-49268082 Msa1292730:intron 55.0%
TGGAGACCTCCTGCTGGATT+AGG + chr8_3:49268779-49268798 Msa1292730:CDS 55.0%
GGAGACCTCCTGCTGGATTA+GGG + chr8_3:49268780-49268799 Msa1292730:CDS 55.0%
ATCATCACCCTCCACCCGAG+AGG - chr8_3:49265464-49265483 None:intergenic 60.0%
TGGCTAAGGAGCAGGCAGAG+AGG + chr8_3:49265530-49265549 Msa1292730:CDS 60.0%
CTAAGGAGCAGGCAGAGAGG+AGG + chr8_3:49265533-49265552 Msa1292730:CDS 60.0%
TGAGGTGGCACAACTCCCTG+CGG - chr8_3:49266407-49266426 None:intergenic 60.0%
GAAGTTTGCCCCCACAGCTG+CGG - chr8_3:49267888-49267907 None:intergenic 60.0%
CTTGTGTGGAGACCTCCTGC+TGG + chr8_3:49268773-49268792 Msa1292730:CDS 60.0%
!! GACGAGTGGTGGTGGCACGT+GGG + chr8_3:49264086-49264105 Msa1292730:CDS 65.0%
GAGGAGGGAGGGTTAGGGGA+AGG + chr8_3:49264157-49264176 Msa1292730:CDS 65.0%
! GGTTGTGACGGGGAGGTGCG+TGG + chr8_3:49264064-49264083 Msa1292730:CDS 70.0%
! GGAGGTGCGTGGACGAGTGG+TGG + chr8_3:49264075-49264094 Msa1292730:CDS 70.0%
GGTGCGTGGACGAGTGGTGG+TGG + chr8_3:49264078-49264097 Msa1292730:CDS 70.0%
!! GGACGAGTGGTGGTGGCACG+TGG + chr8_3:49264085-49264104 Msa1292730:CDS 70.0%
! CGGGGAGGTGCGTGGACGAG+TGG + chr8_3:49264072-49264091 Msa1292730:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 49263780 49269145 49263780 ID=Msa1292730;Name=Msa1292730
chr8_3 mRNA 49263780 49269145 49263780 ID=Msa1292730-mRNA-1;Parent=Msa1292730;Name=Msa1292730-mRNA-1;_AED=0.02;_eAED=0.02;_QI=155|1|1|1|1|1|4|268|320
chr8_3 exon 49263780 49264339 49263780 ID=Msa1292730-mRNA-1:exon:13660;Parent=Msa1292730-mRNA-1
chr8_3 exon 49265529 49265681 49265529 ID=Msa1292730-mRNA-1:exon:13661;Parent=Msa1292730-mRNA-1
chr8_3 exon 49265807 49266012 49265807 ID=Msa1292730-mRNA-1:exon:13662;Parent=Msa1292730-mRNA-1
chr8_3 exon 49268679 49269145 49268679 ID=Msa1292730-mRNA-1:exon:13663;Parent=Msa1292730-mRNA-1
chr8_3 five_prime_UTR 49263780 49263934 49263780 ID=Msa1292730-mRNA-1:five_prime_utr;Parent=Msa1292730-mRNA-1
chr8_3 CDS 49263935 49264339 49263935 ID=Msa1292730-mRNA-1:cds;Parent=Msa1292730-mRNA-1
chr8_3 CDS 49265529 49265681 49265529 ID=Msa1292730-mRNA-1:cds;Parent=Msa1292730-mRNA-1
chr8_3 CDS 49265807 49266012 49265807 ID=Msa1292730-mRNA-1:cds;Parent=Msa1292730-mRNA-1
chr8_3 CDS 49268679 49268877 49268679 ID=Msa1292730-mRNA-1:cds;Parent=Msa1292730-mRNA-1
chr8_3 three_prime_UTR 49268878 49269145 49268878 ID=Msa1292730-mRNA-1:three_prime_utr;Parent=Msa1292730-mRNA-1
Gene Sequence

>Msa1292730

ATGGCTGTAAGCTTAGGAAACCTAACCTTACTCCTCGACATATCTTCACCACGAAGCTTAACTCTCGACAGAAAACCTCTTCTCACGTTACCTCTCAAGAGAGACTCTTCTAGTTGCAGTTGTAGTTATGGTTGTGACGGGGAGGTGCGTGGACGAGTGGTGGTGGCACGTGGGAAGTCAAACTCGGAGCAGAATGGAGTGGACTTTGATTCAGAGAGTGATGAGGAGGGAGGGTTAGGGGAAGGAGATGATTTTGAGACAAAGATAAGGAGGAGAGTGAAGGAGTTTGAAGAGAGGAGAGAGCTTGAGAAGAAAGCTGAAGAGTATTTGGAGAGTAAGGGTGATGATGGTGAGGAAGAGAGTGAGGAAGAGAAGAGGATGAGAGTTAGGAAAGAGCTTGAAAAGGTGGCTAAGGAGCAGGCAGAGAGGAGGGCCACAGCTCAGTTGATGTATGATTTGGGTAAGAAAGCTTATGGGAGAGGCACGTATGGACGTGCCGTTGAGTTTCTTGAAGGTGCACTCACCATCATACCAAGATCTACATTATTTGGTGGTGAGATACAAATATGGCTGGCTATGGCTTATGAGGCCAATAATCGCCATAAGGATTGCATTGCTCTTTACAAGCAATTAGAAAAGTCGCACCCTAGTATTAGCATCAAACGTCAAGCTGCAGAACTTCGTTACATTTTGGAAGCACCAAAGCTCAAGATAACCCAAGAAGAGATGGTGACTATACCCTTGATTGGTTCTAGTTATGACAGTTATGCGGGAACATGGAGCGATAAAAACAAGGATCGAAAGAGTGGAACAGTCAACAGTCCATTTCCATCATCTAAAGATAACTTTTTGGACTTGCTTGTGTGGAGACCTCCTGCTGGATTAGGGAAAAATCGAGCTTTCTGGATTGGTTTGACCATATGGTTGGTATTAGTTGGTGCTGCTCTCTACATTCAAAGATGA

Protein sequence

>Msa1292730

MAVSLGNLTLLLDISSPRSLTLDRKPLLTLPLKRDSSSCSCSYGCDGEVRGRVVVARGKSNSEQNGVDFDSESDEEGGLGEGDDFETKIRRRVKEFEERRELEKKAEEYLESKGDDGEEESEEEKRMRVRKELEKVAKEQAERRATAQLMYDLGKKAYGRGTYGRAVEFLEGALTIIPRSTLFGGEIQIWLAMAYEANNRHKDCIALYKQLEKSHPSISIKRQAAELRYILEAPKLKITQEEMVTIPLIGSSYDSYAGTWSDKNKDRKSGTVNSPFPSSKDNFLDLLVWRPPAGLGKNRAFWIGLTIWLVLVGAALYIQR*