AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1252070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252070 MtrunA17_Chr8g0367981 92.049 327 19 2 1 326 1 321 0.0 574
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252070 AT3G26580.1 56.410 351 127 5 1 326 1 350 1.58e-128 371

Find 105 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAAAGCTGAAGAGTATT+TGG 0.185288 8_2:+48831465 Msa1252070:CDS
ATACCAAGATCTACATTATT+TGG 0.191918 8_2:+48833149 Msa1252070:CDS
GCAATCCTTATGGCGATTAT+TGG 0.215703 8_2:-48833335 None:intergenic
GCTCAGTTGATGTATGATTT+AGG 0.245060 8_2:+48833059 Msa1252070:CDS
AGTGATGAGGAAGGAGGGTT+AGG 0.259304 8_2:+48831373 Msa1252070:CDS
TGCAGAACTTCGTTACATTT+TGG 0.260230 8_2:+48833417 Msa1252070:CDS
TGAAGAGTATTTGGAGAGTA+AGG 0.278180 8_2:+48831474 Msa1252070:CDS
TCTGGGTTGGTTTGACCATA+TGG 0.289235 8_2:+48836338 Msa1252070:CDS
TGGAGACCTCCTGCTGGATT+AGG 0.297197 8_2:+48836301 Msa1252070:CDS
AAATTAGAATCGTCATAAAT+TGG 0.310654 8_2:-48836431 None:intergenic
GTGATGAGGAAGGAGGGTTA+GGG 0.325087 8_2:+48831374 Msa1252070:CDS
GTGAGTTTCAGATACAAATA+TGG 0.342497 8_2:+48833293 Msa1252070:intron
ATCAAATGACCTGTCATAAC+TGG 0.345451 8_2:-48833497 None:intergenic
AAGAGAAGAGGATGAGAGTT+AGG 0.351749 8_2:+48831524 Msa1252070:CDS
GTATAGTCACCATCTCTTCT+TGG 0.352541 8_2:-48833462 None:intergenic
AATTATTGTATGTCACAAAT+AGG 0.362264 8_2:+48836503 Msa1252070:three_prime_UTR
CTGTTGTAGCTATGCGTTTG+AGG 0.378266 8_2:+48831273 Msa1252070:CDS
TCTTGGGTTATCTTGAGCTT+TGG 0.386466 8_2:-48833445 None:intergenic
GGAGACCTCCTGCTGGATTA+GGG 0.390672 8_2:+48836302 Msa1252070:CDS
GGGGCGTGGACGAGTGGTGG+TGG 0.398306 8_2:+48831300 Msa1252070:CDS
TATAGTCACCATCTCTTCTT+GGG 0.408773 8_2:-48833461 None:intergenic
GGAGGGGCGTGGACGAGTGG+TGG 0.410370 8_2:+48831297 Msa1252070:CDS
CGTGCTGTTGAGTTTCTTGA+AGG 0.415604 8_2:+48833113 Msa1252070:CDS
TTATCTTTAGATGATGGAAA+TGG 0.418345 8_2:-48836259 None:intergenic
CTGTCGAGAGTTAAGCTTCG+TGG 0.419384 8_2:-48831187 None:intergenic
TGACGTTTGATGCTAATACT+AGG 0.431805 8_2:-48833391 None:intergenic
TGTGGTTGTAGTAACTTGTA+AGG 0.434312 8_2:-48831054 None:intergenic
AAAGAGCAATGCAATCCTTA+TGG 0.434951 8_2:-48833345 None:intergenic
GATGGCTATGGGATATTTGT+CGG 0.436053 8_2:-48831026 None:intergenic
TGGAGAAGTGGAACTCTGTA+TGG 0.438134 8_2:-48836411 None:intergenic
CCACCAAATAATGTAGATCT+TGG 0.439479 8_2:-48833152 None:intergenic
AGTTAGGAAAGAGCTTGAAA+AGG 0.442833 8_2:+48831540 Msa1252070:CDS
ACCATATGGTTGGTATTAGT+TGG 0.445104 8_2:+48836352 Msa1252070:CDS
CTTGTATGGAGACCTCCTGC+TGG 0.446302 8_2:+48836295 Msa1252070:CDS
TCCACCATGGCTGTAAGCTT+AGG 0.453178 8_2:+48831133 Msa1252070:exon
ATGGCTGGCTATGGCTTATG+AGG 0.453962 8_2:+48833312 Msa1252070:CDS
GTCATAACTGGAACCAATCA+AGG 0.454630 8_2:-48833485 None:intergenic
TGAAGATATGTCGAGGAGTA+AGG 0.455683 8_2:-48831164 None:intergenic
GATTTAGGTAAGAAAGCTTA+CGG 0.455917 8_2:+48833074 Msa1252070:CDS
GAAGATAAGGAGAAGAGTAA+AGG 0.456695 8_2:+48831417 Msa1252070:CDS
GAGGAAGGAGGGTTAGGGGA+TGG 0.462443 8_2:+48831379 Msa1252070:CDS
GGTAAGAAAGCTTACGGGAG+AGG 0.463302 8_2:+48833080 Msa1252070:CDS
ATGGTGACTATACCCTTGAT+TGG 0.471938 8_2:+48833472 Msa1252070:CDS
GGACGAGTGGTGGTGGCACG+TGG 0.472990 8_2:+48831307 Msa1252070:CDS
TGATGAGGAAGGAGGGTTAG+GGG 0.481857 8_2:+48831375 Msa1252070:CDS
ATTTAGGTAAGAAAGCTTAC+GGG 0.482396 8_2:+48833075 Msa1252070:CDS
ATATGTCGAGGAGTAAGGTT+AGG 0.490226 8_2:-48831159 None:intergenic
TGTTGTAGCTATGCGTTTGA+GGG 0.491542 8_2:+48831274 Msa1252070:CDS
TTGGAGAGTAAGGGTGATGA+TGG 0.493963 8_2:+48831484 Msa1252070:CDS
TTTCAAGAGGACAACCAAAC+GGG 0.495184 8_2:-48836552 None:intergenic
GACGTTTGATGCTAATACTA+GGG 0.495643 8_2:-48833390 None:intergenic
ATCTACATTATTTGGTGGTG+AGG 0.501114 8_2:+48833157 Msa1252070:CDS
TACAATCTTGTAATTTCAAG+AGG 0.502832 8_2:-48836565 None:intergenic
GAGAAGCTGCCACACGTCAC+TGG 0.502838 8_2:+48830976 None:intergenic
TTTGAATGTTGAAAAGGAAG+AGG 0.509641 8_2:-48831090 None:intergenic
TGTAAGGAAGAAGATGGCTA+TGG 0.510587 8_2:-48831038 None:intergenic
ACCAACTAATACCAACCATA+TGG 0.521837 8_2:-48836353 None:intergenic
TGATTGGTTCCAGTTATGAC+AGG 0.524132 8_2:+48833488 Msa1252070:CDS
GAATCAGGTGGCTAAGGAGC+AGG 0.526095 8_2:+48833019 Msa1252070:intron
CCAAGATCTACATTATTTGG+TGG 0.527272 8_2:+48833152 Msa1252070:CDS
ATTTCAAGAGGACAACCAAA+CGG 0.528286 8_2:-48836553 None:intergenic
TGGAAAAGAGAGAAGAAAGA+AGG 0.529382 8_2:-48831114 None:intergenic
AAGAGAGTGAGGAAGAGAAG+AGG 0.534892 8_2:+48831512 Msa1252070:CDS
GGTTGGTTTGACCATATGGT+TGG 0.536519 8_2:+48836342 Msa1252070:CDS
TAAGGAGCAGGCAGAGAGGA+GGG 0.539752 8_2:+48833031 Msa1252070:CDS
ATCGTCATAAATTGGAGAAG+TGG 0.540050 8_2:-48836423 None:intergenic
GCAGTAACGTGGAAATGTGT+AGG 0.542502 8_2:-48830999 None:intergenic
TGAGGCCAATAATCGCCATA+AGG 0.547038 8_2:+48833330 Msa1252070:CDS
GTTTCCTAAGCTTACAGCCA+TGG 0.550071 8_2:-48831137 None:intergenic
TAATGTAGATCTTGGTATGA+TGG 0.552370 8_2:-48833144 None:intergenic
GAAGAGTATTTGGAGAGTAA+GGG 0.556657 8_2:+48831475 Msa1252070:CDS
TGATGGTGAGGAAGAGAGTG+AGG 0.565673 8_2:+48831501 Msa1252070:CDS
GTAACTTGTAAGGAAGAAGA+TGG 0.566115 8_2:-48831044 None:intergenic
GAGTAAAGGAGTTTGAAGAG+AGG 0.566397 8_2:+48831431 Msa1252070:CDS
GATACAAATATGGCTGGCTA+TGG 0.569208 8_2:+48833303 Msa1252070:intron
TCTGTAGTTATGCGGGAACA+TGG 0.570481 8_2:+48836194 Msa1252070:intron
GGCACGTGGGAAGTCAAACT+CGG 0.571416 8_2:+48831321 Msa1252070:CDS
AAGTCAAACTCGGAGCAGAA+TGG 0.574039 8_2:+48831331 Msa1252070:CDS
GTTTCAGATACAAATATGGC+TGG 0.576737 8_2:+48833297 Msa1252070:intron
CAAGATAACCCAAGAAGAGA+TGG 0.579385 8_2:+48833453 Msa1252070:CDS
GCTTACGGGAGAGGCACGTA+CGG 0.581433 8_2:+48833089 Msa1252070:CDS
GTAAGGAAGAAGATGGCTAT+GGG 0.582455 8_2:-48831037 None:intergenic
CTAAGGAGCAGGCAGAGAGG+AGG 0.584864 8_2:+48833030 Msa1252070:CDS
AACGCATAGCTACAACAGCA+AGG 0.589818 8_2:-48831268 None:intergenic
CGCATAGCTACAACAGCAAG+GGG 0.594782 8_2:-48831266 None:intergenic
GAAGATGAGTCTCTCTTGAG+AGG 0.594811 8_2:-48831229 None:intergenic
TTTGACGAATCAGGTGGCTA+AGG 0.599329 8_2:+48833013 Msa1252070:intron
TTGAGAGGTAACGTGAGAAG+AGG 0.599921 8_2:-48831214 None:intergenic
ACGCATAGCTACAACAGCAA+GGG 0.608025 8_2:-48831267 None:intergenic
GACTCGGAGAGTGATGAGGA+AGG 0.613539 8_2:+48831364 Msa1252070:CDS
CGGAGAGTGATGAGGAAGGA+GGG 0.613981 8_2:+48831368 Msa1252070:CDS
GAGTAAGGGTGATGATGGTG+AGG 0.618593 8_2:+48831489 Msa1252070:CDS
TCGGAGAGTGATGAGGAAGG+AGG 0.623594 8_2:+48831367 Msa1252070:CDS
TTGTAGCTATGCGTTTGAGG+GGG 0.625481 8_2:+48831276 Msa1252070:CDS
TCATAACTGGAACCAATCAA+GGG 0.627632 8_2:-48833484 None:intergenic
GAATGGAGTGGACTTTGACT+CGG 0.628890 8_2:+48831348 Msa1252070:CDS
CTTTGACTCGGAGAGTGATG+AGG 0.632280 8_2:+48831360 Msa1252070:CDS
TCCTAAGCTTACAGCCATGG+TGG 0.632513 8_2:-48831134 None:intergenic
GTTGTAGCTATGCGTTTGAG+GGG 0.634718 8_2:+48831275 Msa1252070:CDS
ATCATACATCAACTGAGCTG+TGG 0.636393 8_2:-48833054 None:intergenic
AAACTCGGAGCAGAATGGAG+TGG 0.664807 8_2:+48831336 Msa1252070:CDS
GACGAGTGGTGGTGGCACGT+GGG 0.673216 8_2:+48831308 Msa1252070:CDS
TGGCTAAGGAGCAGGCAGAG+AGG 0.675876 8_2:+48833027 Msa1252070:CDS
TTCGTGGTGAAGATATGTCG+AGG 0.678789 8_2:-48831171 None:intergenic
ATGTGTAGGCCAGTGACGTG+TGG 0.697604 8_2:-48830985 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAGCAATTTTTTATTTTTT+AGG + chr8_2:48832327-48832346 Msa1252070:intron 10.0%
!! ATTTATAATATAATTGTTGA+AGG - chr8_2:48835341-48835360 None:intergenic 10.0%
!!! AATTTTGTAGTTTTTGTTTT+TGG + chr8_2:48831690-48831709 Msa1252070:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr8_2:48831944-48831963 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr8_2:48831943-48831962 Msa1252070:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr8_2:48831967-48831986 Msa1252070:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + chr8_2:48832070-48832089 Msa1252070:intron 15.0%
!!! TGTCTTATTAAAATTAACTA+AGG + chr8_2:48833853-48833872 Msa1252070:intron 15.0%
!!! TTTTTGACAAAAAATATTGT+AGG + chr8_2:48834639-48834658 Msa1252070:intron 15.0%
!! ATAATGATAATAAGAAATGA+GGG - chr8_2:48835891-48835910 None:intergenic 15.0%
!! ATTTCTTATTATCATTATCA+GGG + chr8_2:48835893-48835912 Msa1252070:intron 15.0%
!!! TTTTATTGATAATACTTTTG+CGG + chr8_2:48836129-48836148 Msa1252070:intron 15.0%
!! TAAACAGTAGTTTAGTATTT+AGG - chr8_2:48831721-48831740 None:intergenic 20.0%
!! TAACAAGGATAATTTCTTAA+AGG + chr8_2:48831739-48831758 Msa1252070:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr8_2:48831953-48831972 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr8_2:48832030-48832049 Msa1252070:intron 20.0%
!! GATGTATATGATCTATATTA+TGG - chr8_2:48832379-48832398 None:intergenic 20.0%
!! CATATACATCATTTATTCAA+CGG + chr8_2:48832389-48832408 Msa1252070:intron 20.0%
!!! TTTTTGACTAATTTGTTGAT+TGG + chr8_2:48832486-48832505 Msa1252070:intron 20.0%
!!! AGATGGATTGTAATATTATA+TGG + chr8_2:48832698-48832717 Msa1252070:intron 20.0%
!!! AATAACTATTCTTGGTTTTT+TGG + chr8_2:48832726-48832745 Msa1252070:intron 20.0%
!! TTGCTTACAAATATTTGTTT+AGG - chr8_2:48832905-48832924 None:intergenic 20.0%
!!! GATTCTTATTTAGTTAAGAA+TGG - chr8_2:48833188-48833207 None:intergenic 20.0%
!!! TTAGATGATAATGTTCATAA+TGG + chr8_2:48833650-48833669 Msa1252070:intron 20.0%
!! ATCAATGATAAACTTAAGTA+TGG + chr8_2:48833762-48833781 Msa1252070:intron 20.0%
!!! GCTATTTATTTTTAGTGAAT+TGG + chr8_2:48833997-48834016 Msa1252070:intron 20.0%
!!! AAACAGCTAAACATTTTTTT+TGG - chr8_2:48834364-48834383 None:intergenic 20.0%
!! AGTATTTCAATAATCTCTTT+AGG - chr8_2:48834431-48834450 None:intergenic 20.0%
!! GACTTATAAACAACTTATTT+AGG - chr8_2:48834538-48834557 None:intergenic 20.0%
!! TATTATTGTATGTATATAGC+AGG - chr8_2:48834688-48834707 None:intergenic 20.0%
!! AAATCATTAGGCAAATTATT+AGG - chr8_2:48834734-48834753 None:intergenic 20.0%
!! ATCTTGGTTAAAAATATCAA+TGG - chr8_2:48835209-48835228 None:intergenic 20.0%
!! TTCATATCAAACATATTGTA+AGG + chr8_2:48835497-48835516 Msa1252070:intron 20.0%
!! TCATATCAAACATATTGTAA+GGG + chr8_2:48835498-48835517 Msa1252070:intron 20.0%
!!! CAAATTTTAGTATATTGGTT+AGG - chr8_2:48835620-48835639 None:intergenic 20.0%
!! AAGAATGCAATTATCAATTA+TGG + chr8_2:48835839-48835858 Msa1252070:intron 20.0%
!! GATAATGATAATAAGAAATG+AGG - chr8_2:48835892-48835911 None:intergenic 20.0%
!! CATTTCTTATTATCATTATC+AGG + chr8_2:48835892-48835911 Msa1252070:intron 20.0%
!!! TAATGAAAGTTCTTTTCATA+GGG - chr8_2:48836028-48836047 None:intergenic 20.0%
!!! ATATATACTTGTTTTTATGC+TGG + chr8_2:48836075-48836094 Msa1252070:intron 20.0%
!! AAAAAGTTATCTTTAGATGA+TGG - chr8_2:48836268-48836287 None:intergenic 20.0%
!!! ATCATCTAAAGATAACTTTT+TGG + chr8_2:48836267-48836286 Msa1252070:CDS 20.0%
!! AAATTAGAATCGTCATAAAT+TGG - chr8_2:48836434-48836453 None:intergenic 20.0%
!! AATTATTGTATGTCACAAAT+AGG + chr8_2:48836503-48836522 Msa1252070:three_prime_UTR 20.0%
!!! TTTTATTATATTTTCCCGTT+TGG + chr8_2:48836538-48836557 Msa1252070:three_prime_UTR 20.0%
!!! ATGATTTTGAAACGAAGATA+AGG + chr8_2:48831404-48831423 Msa1252070:CDS 25.0%
!!! TGTAGTTTTTGTTTTTGGAA+AGG + chr8_2:48831695-48831714 Msa1252070:intron 25.0%
! TACTAAACTACTGTTTAACA+AGG + chr8_2:48831724-48831743 Msa1252070:intron 25.0%
! CAGTTATGAGAAAATCATTT+GGG - chr8_2:48831798-48831817 None:intergenic 25.0%
! ACAGTTATGAGAAAATCATT+TGG - chr8_2:48831799-48831818 None:intergenic 25.0%
! AATGATTAAGAGAAAGAGAA+TGG + chr8_2:48831910-48831929 Msa1252070:intron 25.0%
! CATTGAATAAATGATGTATG+TGG + chr8_2:48832352-48832371 Msa1252070:intron 25.0%
! GTGTATGTAAAGAAAACAAA+AGG - chr8_2:48832587-48832606 None:intergenic 25.0%
!!! GTTTTCATACTTTTTGTTTG+AGG + chr8_2:48832781-48832800 Msa1252070:intron 25.0%
! ATACCAAGATCTACATTATT+TGG + chr8_2:48833149-48833168 Msa1252070:CDS 25.0%
! GAAGAATGTGATAAACAAAA+AGG - chr8_2:48833554-48833573 None:intergenic 25.0%
!!! TGTTTTCATTTCTTTGTTGT+TGG + chr8_2:48833612-48833631 Msa1252070:intron 25.0%
! AATGTTCATAATGGCATAAT+AGG + chr8_2:48833659-48833678 Msa1252070:intron 25.0%
!! TAACAATCATTCTAAGAACT+TGG - chr8_2:48833832-48833851 None:intergenic 25.0%
!!! TTTTGAAATGGTCATAAACT+AGG + chr8_2:48833941-48833960 Msa1252070:intron 25.0%
! TCACTAAAAATAAATAGCAC+TGG - chr8_2:48833995-48834014 None:intergenic 25.0%
!!! TTTAGCTGTTTCTATAAACA+AGG + chr8_2:48834373-48834392 Msa1252070:intron 25.0%
! CATATCAAACATATTGTAAG+GGG + chr8_2:48835499-48835518 Msa1252070:intron 25.0%
! ATATCAAACATATTGTAAGG+GGG + chr8_2:48835500-48835519 Msa1252070:intron 25.0%
!!! CGAGACAAATTTTAGTATAT+TGG - chr8_2:48835625-48835644 None:intergenic 25.0%
!! TGACATTGTTTGTTAAATGT+CGG - chr8_2:48835653-48835672 None:intergenic 25.0%
!! CTAATGAAAGTTCTTTTCAT+AGG - chr8_2:48836029-48836048 None:intergenic 25.0%
!! TTTTTACATCTGTAGTTATG+CGG + chr8_2:48836186-48836205 Msa1252070:intron 25.0%
!!! TTATCTTTAGATGATGGAAA+TGG - chr8_2:48836262-48836281 None:intergenic 25.0%
!! CATACAATAATTTTACAGCA+TGG - chr8_2:48836495-48836514 None:intergenic 25.0%
! TACAATCTTGTAATTTCAAG+AGG - chr8_2:48836568-48836587 None:intergenic 25.0%
! AGAGGTGAAGATATTTTATG+TGG - chr8_2:48831075-48831094 None:intergenic 30.0%
TTTGAATGTTGAAAAGGAAG+AGG - chr8_2:48831093-48831112 None:intergenic 30.0%
!!! GAAGGTTTTGAATGTTGAAA+AGG - chr8_2:48831099-48831118 None:intergenic 30.0%
AACTATTACATATGAGACAG+AGG - chr8_2:48831645-48831664 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr8_2:48831861-48831880 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr8_2:48831862-48831881 Msa1252070:intron 30.0%
! ATCTTTTTGTTGGGACTTAT+GGG - chr8_2:48832268-48832287 None:intergenic 30.0%
TGCTTATAATTGAGACTAGA+GGG - chr8_2:48832313-48832332 None:intergenic 30.0%
TTGCTTATAATTGAGACTAG+AGG - chr8_2:48832314-48832333 None:intergenic 30.0%
TGTCAGTTGTCTAATGATAA+AGG - chr8_2:48832642-48832661 None:intergenic 30.0%
CTAGAAGTGAAACATTAAGA+TGG + chr8_2:48832681-48832700 Msa1252070:intron 30.0%
TGGTGCATAATAACTATTCT+TGG + chr8_2:48832718-48832737 Msa1252070:intron 30.0%
GATTTAGGTAAGAAAGCTTA+CGG + chr8_2:48833074-48833093 Msa1252070:CDS 30.0%
ATTTAGGTAAGAAAGCTTAC+GGG + chr8_2:48833075-48833094 Msa1252070:CDS 30.0%
TAATGTAGATCTTGGTATGA+TGG - chr8_2:48833147-48833166 None:intergenic 30.0%
GTGAGTTTCAGATACAAATA+TGG + chr8_2:48833293-48833312 Msa1252070:intron 30.0%
!! AGCATATGCTTTAATTTGTG+TGG - chr8_2:48833721-48833740 None:intergenic 30.0%
ATGGTCATAAACTAGGAATT+AGG + chr8_2:48833948-48833967 Msa1252070:intron 30.0%
!! AAAAATAAATAGCACTGGCA+TGG - chr8_2:48833990-48834009 None:intergenic 30.0%
! TGTCTTCTTGACTTTTATCA+CGG - chr8_2:48834048-48834067 None:intergenic 30.0%
! AGTAGAGCCTATATAGATTT+TGG + chr8_2:48834285-48834304 Msa1252070:intron 30.0%
! GTAGAGCCTATATAGATTTT+GGG + chr8_2:48834286-48834305 Msa1252070:intron 30.0%
! TAGAGCCTATATAGATTTTG+GGG + chr8_2:48834287-48834306 Msa1252070:intron 30.0%
CTATAAACAAGGAGAAAATG+TGG + chr8_2:48834384-48834403 Msa1252070:intron 30.0%
TGCATAACATGTTTATAAGC+TGG - chr8_2:48834460-48834479 None:intergenic 30.0%
TTACAACCTATGAATATTGC+AGG + chr8_2:48834609-48834628 Msa1252070:intron 30.0%
ATTAGGCAAATTATTAGGTC+TGG - chr8_2:48834729-48834748 None:intergenic 30.0%
TACTTTATGTTAATGCCAGA+TGG - chr8_2:48834758-48834777 None:intergenic 30.0%
GTATAATGCGATTATGTTTG+TGG + chr8_2:48834775-48834794 Msa1252070:intron 30.0%
! TACAAAAATCTGATAGCGTA+TGG - chr8_2:48834930-48834949 None:intergenic 30.0%
TTGTATCTATACAAACGAAG+TGG + chr8_2:48834945-48834964 Msa1252070:intron 30.0%
!!! TCCTGATTTTTTTTAGGTGA+CGG + chr8_2:48835055-48835074 Msa1252070:intron 30.0%
GTTGGAAAACTCAAAAATCT+TGG - chr8_2:48835225-48835244 None:intergenic 30.0%
TAGAATGAATTGCATATCAC+TGG + chr8_2:48835360-48835379 Msa1252070:intron 30.0%
AGAATGAATTGCATATCACT+GGG + chr8_2:48835361-48835380 Msa1252070:intron 30.0%
TATGAAGAGAGTAAAGAAGA+TGG - chr8_2:48835483-48835502 None:intergenic 30.0%
CTGGTTGATCTAAGAATTAA+AGG + chr8_2:48835536-48835555 Msa1252070:intron 30.0%
CTAAGAATTAAAGGAGTAGA+AGG + chr8_2:48835545-48835564 Msa1252070:intron 30.0%
! GACATTGTTTGTTAAATGTC+GGG - chr8_2:48835652-48835671 None:intergenic 30.0%
TATCATTATCAGGGCTTATT+CGG + chr8_2:48835902-48835921 Msa1252070:intron 30.0%
TGTTTCATACTCTTCATTAG+TGG + chr8_2:48835989-48836008 Msa1252070:intron 30.0%
! TTTTACATCTGTAGTTATGC+GGG + chr8_2:48836187-48836206 Msa1252070:intron 30.0%
! GTAACTTGTAAGGAAGAAGA+TGG - chr8_2:48831047-48831066 None:intergenic 35.0%
! TGTGGTTGTAGTAACTTGTA+AGG - chr8_2:48831057-48831076 None:intergenic 35.0%
TGGAAAAGAGAGAAGAAAGA+AGG - chr8_2:48831117-48831136 None:intergenic 35.0%
GAAGATAAGGAGAAGAGTAA+AGG + chr8_2:48831417-48831436 Msa1252070:CDS 35.0%
!! GAAGAAAGCTGAAGAGTATT+TGG + chr8_2:48831465-48831484 Msa1252070:CDS 35.0%
!! TGAAGAGTATTTGGAGAGTA+AGG + chr8_2:48831474-48831493 Msa1252070:CDS 35.0%
!! GAAGAGTATTTGGAGAGTAA+GGG + chr8_2:48831475-48831494 Msa1252070:CDS 35.0%
AGTTAGGAAAGAGCTTGAAA+AGG + chr8_2:48831540-48831559 Msa1252070:CDS 35.0%
!! AGACAGAGGAGTACTAATTA+AGG - chr8_2:48831631-48831650 None:intergenic 35.0%
! GTTGTGTGCAGAGTATTAAT+TGG + chr8_2:48831992-48832011 Msa1252070:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr8_2:48831996-48832015 Msa1252070:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr8_2:48832060-48832079 Msa1252070:intron 35.0%
AAAACCCGAAAGCAGTTATA+TGG - chr8_2:48832164-48832183 None:intergenic 35.0%
!!! ATATAACTGCTTTCGGGTTT+TGG + chr8_2:48832163-48832182 Msa1252070:intron 35.0%
!!! TATAACTGCTTTCGGGTTTT+GGG + chr8_2:48832164-48832183 Msa1252070:intron 35.0%
CACAAGTATGTCTAGATACT+AGG - chr8_2:48832196-48832215 None:intergenic 35.0%
! TGATCCTCTCTAGTGTTTTA+AGG + chr8_2:48832239-48832258 Msa1252070:intron 35.0%
! GATCTTTTTGTTGGGACTTA+TGG - chr8_2:48832269-48832288 None:intergenic 35.0%
! ACTCTCTCGATCTTTTTGTT+GGG - chr8_2:48832277-48832296 None:intergenic 35.0%
CAAAGTTTCACGATAACAGT+GGG - chr8_2:48832555-48832574 None:intergenic 35.0%
ACAAAGTTTCACGATAACAG+TGG - chr8_2:48832556-48832575 None:intergenic 35.0%
ACTGTTATCGTGAAACTTTG+TGG + chr8_2:48832555-48832574 Msa1252070:intron 35.0%
!! TTCACTTCTAGTGACTTGTT+AGG - chr8_2:48832672-48832691 None:intergenic 35.0%
!! GACCATTATTTTTCTCCTCT+CGG + chr8_2:48832943-48832962 Msa1252070:intron 35.0%
!! ACCATTATTTTTCTCCTCTC+GGG + chr8_2:48832944-48832963 Msa1252070:intron 35.0%
ACTCGTTGACATATTGTTTG+TGG + chr8_2:48832990-48833009 Msa1252070:intron 35.0%
! GCTCAGTTGATGTATGATTT+AGG + chr8_2:48833059-48833078 Msa1252070:CDS 35.0%
CCACCAAATAATGTAGATCT+TGG - chr8_2:48833155-48833174 None:intergenic 35.0%
CCAAGATCTACATTATTTGG+TGG + chr8_2:48833152-48833171 Msa1252070:CDS 35.0%
!! ATCTACATTATTTGGTGGTG+AGG + chr8_2:48833157-48833176 Msa1252070:CDS 35.0%
GTTTCAGATACAAATATGGC+TGG + chr8_2:48833297-48833316 Msa1252070:intron 35.0%
AAAGAGCAATGCAATCCTTA+TGG - chr8_2:48833348-48833367 None:intergenic 35.0%
GACGTTTGATGCTAATACTA+GGG - chr8_2:48833393-48833412 None:intergenic 35.0%
TGACGTTTGATGCTAATACT+AGG - chr8_2:48833394-48833413 None:intergenic 35.0%
! TGCAGAACTTCGTTACATTT+TGG + chr8_2:48833417-48833436 Msa1252070:CDS 35.0%
TATAGTCACCATCTCTTCTT+GGG - chr8_2:48833464-48833483 None:intergenic 35.0%
TCATAACTGGAACCAATCAA+GGG - chr8_2:48833487-48833506 None:intergenic 35.0%
ATCAAATGACCTGTCATAAC+TGG - chr8_2:48833500-48833519 None:intergenic 35.0%
!! TTTGTTGTTGGTAAGATCAC+TGG + chr8_2:48833624-48833643 Msa1252070:intron 35.0%
GAATGCTTATATCTCTCTAG+TGG - chr8_2:48833810-48833829 None:intergenic 35.0%
! AAAGTCAACCCAAACTTTTG+AGG - chr8_2:48833924-48833943 None:intergenic 35.0%
!!! GTTTGGGTTGACTTTTGAAA+TGG + chr8_2:48833929-48833948 Msa1252070:intron 35.0%
GAAACTGTAAAAGCTCTTTG+AGG + chr8_2:48834079-48834098 Msa1252070:intron 35.0%
GTGAATGTAATAACACGTGT+TGG + chr8_2:48834177-48834196 Msa1252070:intron 35.0%
TAAGAAAAAGCCTCAAAGCT+CGG - chr8_2:48834224-48834243 None:intergenic 35.0%
! AGAGCCTATATAGATTTTGG+GGG + chr8_2:48834288-48834307 Msa1252070:intron 35.0%
TTGTAACTGCCACAATATTC+TGG - chr8_2:48834588-48834607 None:intergenic 35.0%
GATTCTCCTGCAATATTCAT+AGG - chr8_2:48834618-48834637 None:intergenic 35.0%
! TTGCCTAATGATTTTCCATC+TGG + chr8_2:48834740-48834759 Msa1252070:intron 35.0%
ATGCCAGATGGAAAATCATT+AGG - chr8_2:48834746-48834765 None:intergenic 35.0%
TGTTAAGATCGTTGTAAAGC+AGG + chr8_2:48834973-48834992 Msa1252070:intron 35.0%
GTTAAGATCGTTGTAAAGCA+GGG + chr8_2:48834974-48834993 Msa1252070:intron 35.0%
!!! TCTATAGTGGGTTTTCACAA+TGG + chr8_2:48835003-48835022 Msa1252070:intron 35.0%
!!! CTATAGTGGGTTTTCACAAT+GGG + chr8_2:48835004-48835023 Msa1252070:intron 35.0%
! TTTTCACAATGGGAATCCAA+AGG + chr8_2:48835014-48835033 Msa1252070:intron 35.0%
TTTCACAATGGGAATCCAAA+GGG + chr8_2:48835015-48835034 Msa1252070:intron 35.0%
!!! GCTACGTCCTGATTTTTTTT+AGG + chr8_2:48835049-48835068 Msa1252070:intron 35.0%
! GAGCTTCTAAAAATCATGGT+GGG - chr8_2:48835168-48835187 None:intergenic 35.0%
! GTTGGAGCTTCTAAAAATCA+TGG - chr8_2:48835172-48835191 None:intergenic 35.0%
!! GAACAATGAATGTTGGTGAT+TGG - chr8_2:48835319-48835338 None:intergenic 35.0%
GTTGAAGGAACAATGAATGT+TGG - chr8_2:48835326-48835345 None:intergenic 35.0%
! AAACTTCATCTTTAGGAGAG+TGG + chr8_2:48835420-48835439 Msa1252070:intron 35.0%
AAACATATTGTAAGGGGGTT+GGG + chr8_2:48835505-48835524 Msa1252070:intron 35.0%
AAGGAGTTAGTTAACGATCA+AGG + chr8_2:48835564-48835583 Msa1252070:intron 35.0%
TGAGGGTAACAAAACCAATA+CGG - chr8_2:48835874-48835893 None:intergenic 35.0%
AACATGGAGCGATAAAAACA+AGG + chr8_2:48836210-48836229 Msa1252070:CDS 35.0%
AAAAACAAGGATCGAAAGAG+TGG + chr8_2:48836223-48836242 Msa1252070:CDS 35.0%
!! ACTTTTTGGACTTGCTTGTA+TGG + chr8_2:48836281-48836300 Msa1252070:CDS 35.0%
! ACCATATGGTTGGTATTAGT+TGG + chr8_2:48836352-48836371 Msa1252070:CDS 35.0%
ACCAACTAATACCAACCATA+TGG - chr8_2:48836356-48836375 None:intergenic 35.0%
ATCGTCATAAATTGGAGAAG+TGG - chr8_2:48836426-48836445 None:intergenic 35.0%
ATTTCAAGAGGACAACCAAA+CGG - chr8_2:48836556-48836575 None:intergenic 35.0%
GATGGCTATGGGATATTTGT+CGG - chr8_2:48831029-48831048 None:intergenic 40.0%
GTAAGGAAGAAGATGGCTAT+GGG - chr8_2:48831040-48831059 None:intergenic 40.0%
TGTAAGGAAGAAGATGGCTA+TGG - chr8_2:48831041-48831060 None:intergenic 40.0%
! TTCTTCTCTCTTTTCCACCA+TGG + chr8_2:48831120-48831139 Msa1252070:exon 40.0%
ATATGTCGAGGAGTAAGGTT+AGG - chr8_2:48831162-48831181 None:intergenic 40.0%
TGAAGATATGTCGAGGAGTA+AGG - chr8_2:48831167-48831186 None:intergenic 40.0%
TGTTGTAGCTATGCGTTTGA+GGG + chr8_2:48831274-48831293 Msa1252070:CDS 40.0%
GAGTAAAGGAGTTTGAAGAG+AGG + chr8_2:48831431-48831450 Msa1252070:CDS 40.0%
AAGAGAAGAGGATGAGAGTT+AGG + chr8_2:48831524-48831543 Msa1252070:CDS 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr8_2:48832100-48832119 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr8_2:48831995-48832014 Msa1252070:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr8_2:48832100-48832119 Msa1252070:intron 40.0%
GAAGCCTTAAAACACTAGAG+AGG - chr8_2:48832246-48832265 None:intergenic 40.0%
! CACTCTCTCGATCTTTTTGT+TGG - chr8_2:48832278-48832297 None:intergenic 40.0%
ACCCGAGAGGAGAAAAATAA+TGG - chr8_2:48832948-48832967 None:intergenic 40.0%
!! ATTATTTTTCTCCTCTCGGG+TGG + chr8_2:48832947-48832966 Msa1252070:intron 40.0%
GTGGAGGGTGATGATTAAAT+TGG + chr8_2:48832966-48832985 Msa1252070:intron 40.0%
TGTTTGTGGTTTGACGAATC+AGG + chr8_2:48833004-48833023 Msa1252070:intron 40.0%
ATCATACATCAACTGAGCTG+TGG - chr8_2:48833057-48833076 None:intergenic 40.0%
! GATACAAATATGGCTGGCTA+TGG + chr8_2:48833303-48833322 Msa1252070:intron 40.0%
GCAATCCTTATGGCGATTAT+TGG - chr8_2:48833338-48833357 None:intergenic 40.0%
TCTTGGGTTATCTTGAGCTT+TGG - chr8_2:48833448-48833467 None:intergenic 40.0%
CAAGATAACCCAAGAAGAGA+TGG + chr8_2:48833453-48833472 Msa1252070:CDS 40.0%
GTATAGTCACCATCTCTTCT+TGG - chr8_2:48833465-48833484 None:intergenic 40.0%
ATGGTGACTATACCCTTGAT+TGG + chr8_2:48833472-48833491 Msa1252070:CDS 40.0%
GTCATAACTGGAACCAATCA+AGG - chr8_2:48833488-48833507 None:intergenic 40.0%
! TGATTGGTTCCAGTTATGAC+AGG + chr8_2:48833488-48833507 Msa1252070:CDS 40.0%
AACCCATAATAGAAAACCGC+AGG + chr8_2:48833887-48833906 Msa1252070:intron 40.0%
ACCCATAATAGAAAACCGCA+GGG + chr8_2:48833888-48833907 Msa1252070:intron 40.0%
! TCCCTGCGGTTTTCTATTAT+GGG - chr8_2:48833892-48833911 None:intergenic 40.0%
TAATAACACGTGTTGGACAG+CGG + chr8_2:48834184-48834203 Msa1252070:intron 40.0%
AACGCCCCCAAAATCTATAT+AGG - chr8_2:48834295-48834314 None:intergenic 40.0%
!!! ATATAGATTTTGGGGGCGTT+TGG + chr8_2:48834295-48834314 Msa1252070:intron 40.0%
TATTCTGGACTTGGGATGAA+TGG - chr8_2:48834573-48834592 None:intergenic 40.0%
ATCCCAAGTCCAGAATATTG+TGG + chr8_2:48834576-48834595 Msa1252070:intron 40.0%
TGCCACAATATTCTGGACTT+GGG - chr8_2:48834581-48834600 None:intergenic 40.0%
CACAAGTGATAGACTGATAG+TGG + chr8_2:48834813-48834832 Msa1252070:intron 40.0%
AATCCAAAGGGATTGCTCTT+AGG + chr8_2:48835027-48835046 Msa1252070:intron 40.0%
GCCGTCACCTAAAAAAAATC+AGG - chr8_2:48835059-48835078 None:intergenic 40.0%
ACAAAACACACATGTGCAAC+AGG - chr8_2:48835107-48835126 None:intergenic 40.0%
!! CACATGTGTGTTTTGTTCAG+CGG + chr8_2:48835111-48835130 Msa1252070:intron 40.0%
! GGAGCTTCTAAAAATCATGG+TGG - chr8_2:48835169-48835188 None:intergenic 40.0%
ATGGAAAAGAAGCTATGCGT+TGG - chr8_2:48835190-48835209 None:intergenic 40.0%
! TTGAGTTTTCCAACCACACT+AGG + chr8_2:48835231-48835250 Msa1252070:intron 40.0%
GTCAGACTAATATCCCTTCA+TGG - chr8_2:48835285-48835304 None:intergenic 40.0%
ATCACTGGGATGACATCAAA+TGG + chr8_2:48835375-48835394 Msa1252070:intron 40.0%
CAAACATATTGTAAGGGGGT+TGG + chr8_2:48835504-48835523 Msa1252070:intron 40.0%
GGTAACAAAACCAATACGGT+AGG - chr8_2:48835870-48835889 None:intergenic 40.0%
TAGGGAAAAATCGAGCTTTC+TGG + chr8_2:48836320-48836339 Msa1252070:CDS 40.0%
AGGGAAAAATCGAGCTTTCT+GGG + chr8_2:48836321-48836340 Msa1252070:CDS 40.0%
AAAAATCGAGCTTTCTGGGT+TGG + chr8_2:48836325-48836344 Msa1252070:CDS 40.0%
TTTCAAGAGGACAACCAAAC+GGG - chr8_2:48836555-48836574 None:intergenic 40.0%
GCAGTAACGTGGAAATGTGT+AGG - chr8_2:48831002-48831021 None:intergenic 45.0%
!!! TTGTCGGTTTTGCAGTAACG+TGG - chr8_2:48831013-48831032 None:intergenic 45.0%
GTTTCCTAAGCTTACAGCCA+TGG - chr8_2:48831140-48831159 None:intergenic 45.0%
TTCGTGGTGAAGATATGTCG+AGG - chr8_2:48831174-48831193 None:intergenic 45.0%
TTGAGAGGTAACGTGAGAAG+AGG - chr8_2:48831217-48831236 None:intergenic 45.0%
GAAGATGAGTCTCTCTTGAG+AGG - chr8_2:48831232-48831251 None:intergenic 45.0%
ACGCATAGCTACAACAGCAA+GGG - chr8_2:48831270-48831289 None:intergenic 45.0%
AACGCATAGCTACAACAGCA+AGG - chr8_2:48831271-48831290 None:intergenic 45.0%
CTGTTGTAGCTATGCGTTTG+AGG + chr8_2:48831273-48831292 Msa1252070:CDS 45.0%
GTTGTAGCTATGCGTTTGAG+GGG + chr8_2:48831275-48831294 Msa1252070:CDS 45.0%
TTGTAGCTATGCGTTTGAGG+GGG + chr8_2:48831276-48831295 Msa1252070:CDS 45.0%
AAGTCAAACTCGGAGCAGAA+TGG + chr8_2:48831331-48831350 Msa1252070:CDS 45.0%
! GAATGGAGTGGACTTTGACT+CGG + chr8_2:48831348-48831367 Msa1252070:CDS 45.0%
TTGGAGAGTAAGGGTGATGA+TGG + chr8_2:48831484-48831503 Msa1252070:CDS 45.0%
AAGAGAGTGAGGAAGAGAAG+AGG + chr8_2:48831512-48831531 Msa1252070:CDS 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr8_2:48832099-48832118 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr8_2:48832099-48832118 Msa1252070:intron 45.0%
CCGAAAGCAGTTATATGGCA+GGG - chr8_2:48832159-48832178 None:intergenic 45.0%
CCCTGCCATATAACTGCTTT+CGG + chr8_2:48832156-48832175 Msa1252070:intron 45.0%
CCTGCCATATAACTGCTTTC+GGG + chr8_2:48832157-48832176 Msa1252070:intron 45.0%
CCAACGAGACATCGCTTAAT+TGG - chr8_2:48832609-48832628 None:intergenic 45.0%
CCAATTAAGCGATGTCTCGT+TGG + chr8_2:48832606-48832625 Msa1252070:intron 45.0%
TTGTGGTTTGACGAATCAGG+TGG + chr8_2:48833007-48833026 Msa1252070:intron 45.0%
TTTGACGAATCAGGTGGCTA+AGG + chr8_2:48833013-48833032 Msa1252070:intron 45.0%
! CGTGCTGTTGAGTTTCTTGA+AGG + chr8_2:48833113-48833132 Msa1252070:CDS 45.0%
TGAGGCCAATAATCGCCATA+AGG + chr8_2:48833330-48833349 Msa1252070:CDS 45.0%
! CTCCCTGCGGTTTTCTATTA+TGG - chr8_2:48833893-48833912 None:intergenic 45.0%
TAATAGAAAACCGCAGGGAG+TGG + chr8_2:48833893-48833912 Msa1252070:intron 45.0%
!! TGGTGCCACCTCAAAAGTTT+GGG + chr8_2:48833913-48833932 Msa1252070:intron 45.0%
!! GTCAACCCAAACTTTTGAGG+TGG - chr8_2:48833921-48833940 None:intergenic 45.0%
ACGATATTGACACGCAATGC+TGG + chr8_2:48834130-48834149 Msa1252070:intron 45.0%
CTGCCACAATATTCTGGACT+TGG - chr8_2:48834582-48834601 None:intergenic 45.0%
AGCAGGGTAGAGTTCTATAG+TGG + chr8_2:48834990-48835009 Msa1252070:intron 45.0%
GCAGGGTAGAGTTCTATAGT+GGG + chr8_2:48834991-48835010 Msa1252070:intron 45.0%
TAGCCTAAGAGCAATCCCTT+TGG - chr8_2:48835033-48835052 None:intergenic 45.0%
ACATGTGCAACAGGCAGAAA+AGG - chr8_2:48835098-48835117 None:intergenic 45.0%
!! ATGTGTGTTTTGTTCAGCGG+TGG + chr8_2:48835114-48835133 Msa1252070:intron 45.0%
!! TCTAAACTCATGATGGCGGT+TGG - chr8_2:48835140-48835159 None:intergenic 45.0%
!! GAGCTCTAAACTCATGATGG+CGG - chr8_2:48835144-48835163 None:intergenic 45.0%
!! GGAGAGCTCTAAACTCATGA+TGG - chr8_2:48835147-48835166 None:intergenic 45.0%
CAGCTTAAGAAGTGGCTTCT+AGG - chr8_2:48835259-48835278 None:intergenic 45.0%
AGAAGCCACTTCTTAAGCTG+CGG + chr8_2:48835259-48835278 Msa1252070:intron 45.0%
!!! AATGGTTTTTTCCGCAGCTG+TGG + chr8_2:48835393-48835412 Msa1252070:intron 45.0%
!!! ATGGTTTTTTCCGCAGCTGT+GGG + chr8_2:48835394-48835413 Msa1252070:intron 45.0%
TGGGGGCAAACTTCATCTTT+AGG + chr8_2:48835413-48835432 Msa1252070:intron 45.0%
AACGATCAAGGTTCAAACGC+TGG + chr8_2:48835576-48835595 Msa1252070:intron 45.0%
TATGGTTGCTCCTACCGTAT+TGG + chr8_2:48835857-48835876 Msa1252070:intron 45.0%
GAGACATGTTAGCAAGTCGT+CGG - chr8_2:48835953-48835972 None:intergenic 45.0%
TCTGTAGTTATGCGGGAACA+TGG + chr8_2:48836194-48836213 Msa1252070:intron 45.0%
! TTTTTCCCTAATCCAGCAGG+AGG - chr8_2:48836310-48836329 None:intergenic 45.0%
! CGATTTTTCCCTAATCCAGC+AGG - chr8_2:48836313-48836332 None:intergenic 45.0%
!! TCTGGGTTGGTTTGACCATA+TGG + chr8_2:48836338-48836357 Msa1252070:CDS 45.0%
!! GGTTGGTTTGACCATATGGT+TGG + chr8_2:48836342-48836361 Msa1252070:CDS 45.0%
TGGAGAAGTGGAACTCTGTA+TGG - chr8_2:48836414-48836433 None:intergenic 45.0%
TCCACCATGGCTGTAAGCTT+AGG + chr8_2:48831133-48831152 Msa1252070:exon 50.0%
TCCTAAGCTTACAGCCATGG+TGG - chr8_2:48831137-48831156 None:intergenic 50.0%
CTGTCGAGAGTTAAGCTTCG+TGG - chr8_2:48831190-48831209 None:intergenic 50.0%
CGCATAGCTACAACAGCAAG+GGG - chr8_2:48831269-48831288 None:intergenic 50.0%
AAACTCGGAGCAGAATGGAG+TGG + chr8_2:48831336-48831355 Msa1252070:CDS 50.0%
!! CTTTGACTCGGAGAGTGATG+AGG + chr8_2:48831360-48831379 Msa1252070:CDS 50.0%
AGTGATGAGGAAGGAGGGTT+AGG + chr8_2:48831373-48831392 Msa1252070:CDS 50.0%
GTGATGAGGAAGGAGGGTTA+GGG + chr8_2:48831374-48831393 Msa1252070:CDS 50.0%
TGATGAGGAAGGAGGGTTAG+GGG + chr8_2:48831375-48831394 Msa1252070:CDS 50.0%
!! GAGTAAGGGTGATGATGGTG+AGG + chr8_2:48831489-48831508 Msa1252070:CDS 50.0%
! TGATGGTGAGGAAGAGAGTG+AGG + chr8_2:48831501-48831520 Msa1252070:CDS 50.0%
CCCGAAAGCAGTTATATGGC+AGG - chr8_2:48832160-48832179 None:intergenic 50.0%
! ATTTTTCTCCTCTCGGGTGG+AGG + chr8_2:48832950-48832969 Msa1252070:intron 50.0%
! TTTTTCTCCTCTCGGGTGGA+GGG + chr8_2:48832951-48832970 Msa1252070:intron 50.0%
GGTAAGAAAGCTTACGGGAG+AGG + chr8_2:48833080-48833099 Msa1252070:CDS 50.0%
! ATGGCTGGCTATGGCTTATG+AGG + chr8_2:48833312-48833331 Msa1252070:CDS 50.0%
!! GTGGTGCCACCTCAAAAGTT+TGG + chr8_2:48833912-48833931 Msa1252070:intron 50.0%
CTTGGGATGAATGGTGCATC+TGG - chr8_2:48834564-48834583 None:intergenic 50.0%
! TTCTAGGAGCCTAGTGTGGT+TGG - chr8_2:48835243-48835262 None:intergenic 50.0%
TTCTTAAGCTGCGGCCATGA+AGG + chr8_2:48835268-48835287 Msa1252070:intron 50.0%
TCTTAAGCTGCGGCCATGAA+GGG + chr8_2:48835269-48835288 Msa1252070:intron 50.0%
!!! TGGTTTTTTCCGCAGCTGTG+GGG + chr8_2:48835395-48835414 Msa1252070:intron 50.0%
AGGGGGTTGGGTAGTTTAAC+TGG + chr8_2:48835517-48835536 Msa1252070:intron 50.0%
ATGTGTAGGCCAGTGACGTG+TGG - chr8_2:48830988-48831007 None:intergenic 55.0%
TAGCTATGCGTTTGAGGGGG+AGG + chr8_2:48831279-48831298 Msa1252070:CDS 55.0%
AGCTATGCGTTTGAGGGGGA+GGG + chr8_2:48831280-48831299 Msa1252070:CDS 55.0%
GGCACGTGGGAAGTCAAACT+CGG + chr8_2:48831321-48831340 Msa1252070:CDS 55.0%
GACTCGGAGAGTGATGAGGA+AGG + chr8_2:48831364-48831383 Msa1252070:CDS 55.0%
TCGGAGAGTGATGAGGAAGG+AGG + chr8_2:48831367-48831386 Msa1252070:CDS 55.0%
CGGAGAGTGATGAGGAAGGA+GGG + chr8_2:48831368-48831387 Msa1252070:CDS 55.0%
GAATCAGGTGGCTAAGGAGC+AGG + chr8_2:48833019-48833038 Msa1252070:intron 55.0%
TAAGGAGCAGGCAGAGAGGA+GGG + chr8_2:48833031-48833050 Msa1252070:CDS 55.0%
GTCAGTGCTACCGAGCTTTG+AGG + chr8_2:48834211-48834230 Msa1252070:intron 55.0%
! TTTAGGTGACGGCTGAGCAG+TGG + chr8_2:48835066-48835085 Msa1252070:intron 55.0%
! TGGCTTCTAGGAGCCTAGTG+TGG - chr8_2:48835247-48835266 None:intergenic 55.0%
CATGGCCGCAGCTTAAGAAG+TGG - chr8_2:48835267-48835286 None:intergenic 55.0%
!!! GGTTTTTTCCGCAGCTGTGG+GGG + chr8_2:48835396-48835415 Msa1252070:intron 55.0%
CAAGGTTCAAACGCTGGCGA+AGG + chr8_2:48835582-48835601 Msa1252070:intron 55.0%
CTTGTATGGAGACCTCCTGC+TGG + chr8_2:48836295-48836314 Msa1252070:CDS 55.0%
TGGAGACCTCCTGCTGGATT+AGG + chr8_2:48836301-48836320 Msa1252070:CDS 55.0%
GGAGACCTCCTGCTGGATTA+GGG + chr8_2:48836302-48836321 Msa1252070:CDS 55.0%
GCTATGCGTTTGAGGGGGAG+GGG + chr8_2:48831281-48831300 Msa1252070:CDS 60.0%
GAGGAAGGAGGGTTAGGGGA+TGG + chr8_2:48831379-48831398 Msa1252070:CDS 60.0%
ATCATCACCCTCCACCCGAG+AGG - chr8_2:48832961-48832980 None:intergenic 60.0%
TGGCTAAGGAGCAGGCAGAG+AGG + chr8_2:48833027-48833046 Msa1252070:CDS 60.0%
CTAAGGAGCAGGCAGAGAGG+AGG + chr8_2:48833030-48833049 Msa1252070:CDS 60.0%
! GCTTACGGGAGAGGCACGTA+CGG + chr8_2:48833089-48833108 Msa1252070:CDS 60.0%
GAAGTTTGCCCCCACAGCTG+CGG - chr8_2:48835407-48835426 None:intergenic 60.0%
!! GACGAGTGGTGGTGGCACGT+GGG + chr8_2:48831308-48831327 Msa1252070:CDS 65.0%
TGAGGTGGCACCACTCCCTG+CGG - chr8_2:48833906-48833925 None:intergenic 65.0%
!! GGACGAGTGGTGGTGGCACG+TGG + chr8_2:48831307-48831326 Msa1252070:CDS 70.0%
GCGTTTGAGGGGGAGGGGCG+TGG + chr8_2:48831286-48831305 Msa1252070:CDS 75.0%
! GGAGGGGCGTGGACGAGTGG+TGG + chr8_2:48831297-48831316 Msa1252070:CDS 75.0%
GGGGCGTGGACGAGTGGTGG+TGG + chr8_2:48831300-48831319 Msa1252070:CDS 75.0%
!! GGGGGAGGGGCGTGGACGAG+TGG + chr8_2:48831294-48831313 Msa1252070:CDS 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 48830984 48836667 48830984 ID=Msa1252070;Name=Msa1252070
chr8_2 mRNA 48830984 48836667 48830984 ID=Msa1252070-mRNA-1;Parent=Msa1252070;Name=Msa1252070-mRNA-1;_AED=0.02;_eAED=0.02;_QI=155|1|1|1|1|1|4|268|326
chr8_2 exon 48830984 48831561 48830984 ID=Msa1252070-mRNA-1:exon:14705;Parent=Msa1252070-mRNA-1
chr8_2 exon 48833026 48833178 48833026 ID=Msa1252070-mRNA-1:exon:14706;Parent=Msa1252070-mRNA-1
chr8_2 exon 48833304 48833509 48833304 ID=Msa1252070-mRNA-1:exon:14707;Parent=Msa1252070-mRNA-1
chr8_2 exon 48836201 48836667 48836201 ID=Msa1252070-mRNA-1:exon:14708;Parent=Msa1252070-mRNA-1
chr8_2 five_prime_UTR 48830984 48831138 48830984 ID=Msa1252070-mRNA-1:five_prime_utr;Parent=Msa1252070-mRNA-1
chr8_2 CDS 48831139 48831561 48831139 ID=Msa1252070-mRNA-1:cds;Parent=Msa1252070-mRNA-1
chr8_2 CDS 48833026 48833178 48833026 ID=Msa1252070-mRNA-1:cds;Parent=Msa1252070-mRNA-1
chr8_2 CDS 48833304 48833509 48833304 ID=Msa1252070-mRNA-1:cds;Parent=Msa1252070-mRNA-1
chr8_2 CDS 48836201 48836399 48836201 ID=Msa1252070-mRNA-1:cds;Parent=Msa1252070-mRNA-1
chr8_2 three_prime_UTR 48836400 48836667 48836400 ID=Msa1252070-mRNA-1:three_prime_utr;Parent=Msa1252070-mRNA-1
Gene Sequence

>Msa1252070

ATGGCTGTAAGCTTAGGAAACCTAACCTTACTCCTCGACATATCTTCACCACGAAGCTTAACTCTCGACAGAAAACCTCTTCTCACGTTACCTCTCAAGAGAGACTCATCTTCTTCTTCAACTTCATCCCCTTGCTGTTGTAGCTATGCGTTTGAGGGGGAGGGGCGTGGACGAGTGGTGGTGGCACGTGGGAAGTCAAACTCGGAGCAGAATGGAGTGGACTTTGACTCGGAGAGTGATGAGGAAGGAGGGTTAGGGGATGGAGATGATTTTGAAACGAAGATAAGGAGAAGAGTAAAGGAGTTTGAAGAGAGGAGAGAGCTTGAGAAGAAAGCTGAAGAGTATTTGGAGAGTAAGGGTGATGATGGTGAGGAAGAGAGTGAGGAAGAGAAGAGGATGAGAGTTAGGAAAGAGCTTGAAAAGGTGGCTAAGGAGCAGGCAGAGAGGAGGGCCACAGCTCAGTTGATGTATGATTTAGGTAAGAAAGCTTACGGGAGAGGCACGTACGGACGTGCTGTTGAGTTTCTTGAAGGTGCACTCACCATCATACCAAGATCTACATTATTTGGTGGTGAGATACAAATATGGCTGGCTATGGCTTATGAGGCCAATAATCGCCATAAGGATTGCATTGCTCTTTACAAGCAATTAGAAAAGTCGCACCCTAGTATTAGCATCAAACGTCAAGCTGCAGAACTTCGTTACATTTTGGAAGCACCAAAGCTCAAGATAACCCAAGAAGAGATGGTGACTATACCCTTGATTGGTTCCAGTTATGACAGTTATGCGGGAACATGGAGCGATAAAAACAAGGATCGAAAGAGTGGAACAGTCAACAGTCCATTTCCATCATCTAAAGATAACTTTTTGGACTTGCTTGTATGGAGACCTCCTGCTGGATTAGGGAAAAATCGAGCTTTCTGGGTTGGTTTGACCATATGGTTGGTATTAGTTGGTGCTGCTCTCTACATTCAAAGATGA

Protein sequence

>Msa1252070

MAVSLGNLTLLLDISSPRSLTLDRKPLLTLPLKRDSSSSSTSSPCCCSYAFEGEGRGRVVVARGKSNSEQNGVDFDSESDEEGGLGDGDDFETKIRRRVKEFEERRELEKKAEEYLESKGDDGEEESEEEKRMRVRKELEKVAKEQAERRATAQLMYDLGKKAYGRGTYGRAVEFLEGALTIIPRSTLFGGEIQIWLAMAYEANNRHKDCIALYKQLEKSHPSISIKRQAAELRYILEAPKLKITQEEMVTIPLIGSSYDSYAGTWSDKNKDRKSGTVNSPFPSSKDNFLDLLVWRPPAGLGKNRAFWVGLTIWLVLVGAALYIQR*