AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1263110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263110 MtrunA17_Chr4g0076051 96.992 399 12 0 1 399 1 399 0.0 801
Msa1263110 MtrunA17_Chr2g0278181 98.065 310 6 0 90 399 1 310 0.0 627
Msa1263110 MtrunA17_Chr2g0290131 67.588 398 124 4 2 396 5 400 0.0 532
Msa1263110 MtrunA17_Chr7g0234191 42.025 395 202 9 4 389 57 433 2.92e-97 297
Msa1263110 MtrunA17_Chr3g0101961 41.713 362 196 8 25 381 26 377 5.42e-87 269
Msa1263110 MtrunA17_Chr5g0447771 34.375 384 227 8 25 393 60 433 8.53e-66 216
Msa1263110 MtrunA17_Chr5g0444651 32.987 385 225 11 8 372 15 386 4.68e-59 197
Msa1263110 MtrunA17_Chr8g0347591 37.766 188 104 5 188 371 199 377 7.11e-32 124
Msa1263110 MtrunA17_Chr8g0338731 34.021 194 121 5 1 194 8 194 2.66e-25 103
Msa1263110 MtrunA17_Chr7g0275621 27.961 304 194 9 87 384 101 385 1.36e-24 104
Msa1263110 MtrunA17_Chr7g0261921 36.441 118 74 1 90 207 1 117 3.41e-19 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263110 AT5G47530.1 53.421 380 161 7 15 388 17 386 3.51e-136 395
Msa1263110 AT4G17280.1 50.254 394 175 7 1 386 10 390 1.55e-130 381
Msa1263110 AT5G35735.1 46.867 399 189 8 8 395 12 398 3.16e-117 347
Msa1263110 AT3G25290.1 43.733 375 191 8 15 378 18 383 7.76e-104 313
Msa1263110 AT3G25290.2 43.733 375 191 8 15 378 18 383 7.76e-104 313
Msa1263110 AT4G12980.1 43.257 393 201 8 2 382 6 388 1.75e-98 299
Msa1263110 AT3G59070.1 40.483 373 197 10 8 367 12 372 3.80e-83 262
Msa1263110 AT2G04850.1 35.789 380 219 9 29 392 27 397 5.76e-69 223
Msa1263110 AT5G48750.1 42.979 235 124 5 17 247 26 254 5.45e-57 187
Msa1263110 AT3G07570.1 29.722 360 192 13 4 335 9 335 1.34e-30 120
Msa1263110 AT3G61750.2 34.946 186 113 4 167 352 100 277 6.40e-29 115
Msa1263110 AT3G61750.1 34.946 186 113 4 167 352 177 354 1.64e-28 115
Msa1263110 AT3G07390.1 33.679 193 117 6 9 199 36 219 2.81e-23 98.6
Msa1263110 AT3G07390.2 38.182 110 63 3 15 123 40 145 7.91e-16 75.1
Msa1263110 AT5G54830.1 27.273 198 127 7 153 342 635 823 2.27e-11 66.2

Find 122 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGACCCCTTTGTATATTT+TGG 0.071146 8_2:-66192748 Msa1263110:three_prime_UTR
TCCATTAGTTATCCTGTTTC+TGG 0.137764 8_2:-66194195 Msa1263110:CDS
CATGCTTACATTGGTATTAT+TGG 0.155934 8_2:-66192974 Msa1263110:CDS
CTATACTTACTATGGCTTAA+AGG 0.171632 8_2:+66192828 None:intergenic
GAAGTCTTGGATCTTGTTTC+TGG 0.179617 8_2:-66194012 Msa1263110:CDS
GCCTACATAGTTGGATTATC+TGG 0.214774 8_2:-66193265 Msa1263110:CDS
CATTGGTATTATTGGTGCTT+TGG 0.218211 8_2:-66192966 Msa1263110:CDS
CCAAGACTTCCTTAGAGTTT+TGG 0.257990 8_2:+66194025 None:intergenic
ATCATTATTGTAACGTTCTC+TGG 0.273084 8_2:-66192545 Msa1263110:three_prime_UTR
GTTTGTAATGCTAATGCTTA+TGG 0.273236 8_2:+66193057 None:intergenic
ATGTTTGAAGTATATGCTTT+TGG 0.274313 8_2:+66194249 None:intergenic
ATTGGTATTATTGGTGCTTT+GGG 0.280623 8_2:-66192965 Msa1263110:CDS
CATCATTCCTATACTTACTA+TGG 0.303608 8_2:+66192820 None:intergenic
ATTCTTCAATGGGTTGCTTT+TGG 0.313612 8_2:+66194630 None:intergenic
TCCAAATGGAACAACCTCTT+TGG 0.315874 8_2:-66194118 Msa1263110:CDS
AAGACTTCAGATGGTGTTAA+TGG 0.319234 8_2:-66192875 Msa1263110:CDS
CTGGAATAACTGCAACAAAT+AGG 0.325023 8_2:-66194365 Msa1263110:CDS
TATACTTACTATGGCTTAAA+GGG 0.330924 8_2:+66192829 None:intergenic
CTTTGTTGTTTGAGAATGTT+TGG 0.332596 8_2:+66194484 None:intergenic
ATAGTTGGATTATCTGGTTT+TGG 0.338557 8_2:-66193259 Msa1263110:CDS
CTCAACTTATGGTCTTTGTT+TGG 0.344950 8_2:+66193121 None:intergenic
TCCAGTAAAATCTCAACTTA+TGG 0.345086 8_2:+66193110 None:intergenic
CAACAAATAGGTGGGTTGCT+TGG 0.346817 8_2:-66194353 Msa1263110:CDS
AAGGGTGCTGCTTGGATTGA+TGG 0.347392 8_2:+66194329 None:intergenic
ACCAAAGAGGTTGTTCCATT+TGG 0.348727 8_2:+66194117 None:intergenic
GCTTGTGCTCCGATCATGGC+TGG 0.356922 8_2:+66194303 None:intergenic
TAGGGGATCGTTACAAGAAC+TGG 0.360418 8_2:-66193000 Msa1263110:CDS
ACCAATCCCACTTGCAGCTT+GGG 0.378912 8_2:+66193984 None:intergenic
AACAAATAGGTGGGTTGCTT+GGG 0.381341 8_2:-66194352 Msa1263110:CDS
CAACACCTTTCTTCGGTTTG+TGG 0.386786 8_2:-66192519 Msa1263110:three_prime_UTR
TAATGATATTTGAAACTTCA+AGG 0.391491 8_2:+66192561 None:intergenic
CTGGGAGCAACACCTTTCTT+CGG 0.393940 8_2:-66192526 Msa1263110:three_prime_UTR
CAAGTCTCTGCCTACATAGT+TGG 0.397780 8_2:-66193274 Msa1263110:CDS
AATATCTACCACCACGTTGT+AGG 0.399297 8_2:-66193088 Msa1263110:CDS
TTTCAAAGGGTTTGAAGCAT+TGG 0.401125 8_2:-66193032 Msa1263110:CDS
GCTTTGCGTAAATTCTTCAA+TGG 0.402759 8_2:+66194619 None:intergenic
TGGTTCATGTATGGCAAGAT+GGG 0.403428 8_2:-66194098 Msa1263110:CDS
TTGGTTCATGTATGGCAAGA+TGG 0.409548 8_2:-66194099 Msa1263110:CDS
ATCTTCTCACCAAAACTCTA+AGG 0.410472 8_2:-66194034 Msa1263110:CDS
TTCAAAGGGTTTGAAGCATT+GGG 0.410583 8_2:-66193031 Msa1263110:CDS
CTTTGCGTAAATTCTTCAAT+GGG 0.419493 8_2:+66194620 None:intergenic
CAACCTCTTTGGTTCATGTA+TGG 0.419802 8_2:-66194107 Msa1263110:CDS
AGTTCTAAATGCAATAAGTT+GGG 0.423172 8_2:-66193389 Msa1263110:CDS
TTTGGGCTTCCACTGGCTTG+TGG 0.428919 8_2:+66194267 None:intergenic
TGCTATTGTTCTTGTAACCT+TGG 0.433426 8_2:-66193176 Msa1263110:CDS
ACCAGAAACAGGATAACTAA+TGG 0.433626 8_2:+66194194 None:intergenic
CCAAAACTCTAAGGAAGTCT+TGG 0.434557 8_2:-66194025 Msa1263110:CDS
CAAAGCTTGTGCTCCGATCA+TGG 0.437700 8_2:+66194299 None:intergenic
TGGGGAATCTTGATGCCAAC+AGG 0.450699 8_2:-66193370 Msa1263110:CDS
GCAACTTTGACCCTTCCAAA+TGG 0.457321 8_2:-66194132 Msa1263110:CDS
GCTGGGTCAAGGGTGCTGCT+TGG 0.458703 8_2:+66194321 None:intergenic
TGGTATTATTGGTGCTTTGG+GGG 0.460113 8_2:-66192963 Msa1263110:CDS
GTGGCAGACAAACCAGAAAC+AGG 0.463187 8_2:+66194183 None:intergenic
CATGATCGGAGCACAAGCTT+TGG 0.470343 8_2:-66194298 Msa1263110:CDS
TCCCAAGCTGCAAGTGGGAT+TGG 0.471818 8_2:-66193985 Msa1263110:CDS
AACCAATCCCACTTGCAGCT+TGG 0.473554 8_2:+66193983 None:intergenic
CTTTAAGCCATAGTAAGTAT+AGG 0.474144 8_2:-66192827 Msa1263110:exon
ATATCTACCACCACGTTGTA+GGG 0.487362 8_2:-66193087 Msa1263110:CDS
TCCGATCATGGCTGGGTCAA+GGG 0.488469 8_2:+66194311 None:intergenic
CTCCGATCATGGCTGGGTCA+AGG 0.489759 8_2:+66194310 None:intergenic
GGTATTATTGGTGCTTTGGG+GGG 0.491041 8_2:-66192962 Msa1263110:CDS
TCAAATCCGCAGACCCTGCT+TGG 0.493088 8_2:-66193318 Msa1263110:CDS
ACCCTTGACCCAGCCATGAT+CGG 0.495736 8_2:-66194312 Msa1263110:CDS
AAGAGGTTGTTCCATTTGGA+AGG 0.497441 8_2:+66194121 None:intergenic
GATCGGAGCACAAGCTTTGG+TGG 0.497818 8_2:-66194295 Msa1263110:CDS
GAGTTCTAAATGCAATAAGT+TGG 0.504686 8_2:-66193390 Msa1263110:CDS
AGTAATAGCAAGGTATTTGA+AGG 0.512011 8_2:-66193344 Msa1263110:CDS
GAAGAATTTACGCAAAGCAA+AGG 0.513625 8_2:-66194614 Msa1263110:five_prime_UTR
GAGTACCCAAAATATACAAA+GGG 0.515639 8_2:+66192742 None:intergenic
AAGAATTTACGCAAAGCAAA+GGG 0.515901 8_2:-66194613 Msa1263110:five_prime_UTR
TTGGTATTATTGGTGCTTTG+GGG 0.518620 8_2:-66192964 Msa1263110:CDS
ATGTGAAGATAGAACCAAGC+AGG 0.523540 8_2:+66193304 None:intergenic
TCATTATTGTAACGTTCTCT+GGG 0.531140 8_2:-66192544 Msa1263110:three_prime_UTR
TTTGGTACTGGTCTCAAACT+CGG 0.532870 8_2:-66193241 Msa1263110:CDS
TTTGGAAGCTTACACGTGGA+TGG 0.533911 8_2:-66192927 Msa1263110:CDS
AGTTAACCTCGTACCTCCAC+TGG 0.539955 8_2:-66194434 Msa1263110:CDS
TCCACGTGTAAGCTTCCAAA+AGG 0.545026 8_2:+66192930 None:intergenic
CTTGTGCTCCGATCATGGCT+GGG 0.548227 8_2:+66194304 None:intergenic
GAATAACTGCAACAAATAGG+TGG 0.552346 8_2:-66194362 Msa1263110:CDS
CTTGCTATTACTGCTCCTGT+TGG 0.560569 8_2:+66193355 None:intergenic
GATTCATGGCTATGTTCTTG+AGG 0.562296 8_2:+66194054 None:intergenic
GTTAATGGAGCAAATAGCTA+TGG 0.568663 8_2:-66192860 Msa1263110:CDS
AACTGGAAGCATGCTTACAT+TGG 0.570819 8_2:-66192983 Msa1263110:CDS
GGTTCATGTATGGCAAGATG+GGG 0.572736 8_2:-66194097 Msa1263110:CDS
ACCAGATAATCCAACTATGT+AGG 0.573850 8_2:+66193264 None:intergenic
AGAGTACCCAAAATATACAA+AGG 0.577577 8_2:+66192741 None:intergenic
GTTCTAAATGCAATAAGTTG+GGG 0.579470 8_2:-66193388 Msa1263110:CDS
AGAGGTTGTTCCATTTGGAA+GGG 0.580852 8_2:+66194122 None:intergenic
GCAGAGAACAAGACTTCAGA+TGG 0.581792 8_2:-66192884 Msa1263110:CDS
CAAACTCGGTAGTGATTCAG+AGG 0.584270 8_2:-66193227 Msa1263110:CDS
TTAGTTTAATACAATATGAG+AGG 0.595901 8_2:+66194736 None:intergenic
AATCCCACTTGCAGCTTGGG+AGG 0.599310 8_2:+66193987 None:intergenic
AAACGTAAGCCTCAACATGA+TGG 0.602929 8_2:+66194569 None:intergenic
GGTACCTCCCAAGCTGCAAG+TGG 0.604136 8_2:-66193991 Msa1263110:CDS
GTGGCTATTCCACAAGCCAG+TGG 0.609291 8_2:-66194276 Msa1263110:CDS
AATAACTGCAACAAATAGGT+GGG 0.611835 8_2:-66194361 Msa1263110:CDS
TTGTTTCATCGTATGACCAG+TGG 0.615698 8_2:+66194418 None:intergenic
ACAAGCACACGGTTGCAAGA+AGG 0.618408 8_2:-66194219 Msa1263110:CDS
GACATAGCATACATACACAC+TGG 0.619673 8_2:-66194384 Msa1263110:CDS
TAGTTTAATACAATATGAGA+GGG 0.623159 8_2:+66194737 None:intergenic
AAACACTTGAAGAGTTGCCA+AGG 0.625483 8_2:+66193159 None:intergenic
TACGCAAAGCAAAGGGAAGG+AGG 0.625720 8_2:-66194606 Msa1263110:five_prime_UTR
TTGCCATACATGAACCAAAG+AGG 0.632447 8_2:+66194104 None:intergenic
CAACAGGAGCAGTAATAGCA+AGG 0.639419 8_2:-66193354 Msa1263110:CDS
ATTTACGCAAAGCAAAGGGA+AGG 0.640932 8_2:-66194609 Msa1263110:five_prime_UTR
ATACAATATGAGAGGGACAG+AGG 0.641017 8_2:+66194744 None:intergenic
TTTCATCGTATGACCAGTGG+AGG 0.641448 8_2:+66194421 None:intergenic
TGTGAAGATAGAACCAAGCA+GGG 0.656540 8_2:+66193305 None:intergenic
ATAGAACCAAGCAGGGTCTG+CGG 0.662307 8_2:+66193312 None:intergenic
AACCTCATTATTCTGATACG+TGG 0.667735 8_2:+66194164 None:intergenic
GTACCTCCCAAGCTGCAAGT+GGG 0.668450 8_2:-66193990 Msa1263110:CDS
TGGAGGTACGAGGTTAACTG+TGG 0.671548 8_2:+66194438 None:intergenic
TGGTCATACGATGAAACAAG+TGG 0.675142 8_2:-66194414 Msa1263110:CDS
TGCCACGTATCAGAATAATG+AGG 0.677711 8_2:-66194166 Msa1263110:CDS
ACATTGTAGACACAAGCACA+CGG 0.692248 8_2:-66194230 Msa1263110:CDS
ACATGATTGAGTTTGAGCTG+AGG 0.702084 8_2:+66194512 None:intergenic
TATGCTACTCAAAACACACA+AGG 0.702224 8_2:+66194545 None:intergenic
GTATGACCAGTGGAGGTACG+AGG 0.705546 8_2:+66194428 None:intergenic
AAACTCGGTAGTGATTCAGA+GGG 0.706199 8_2:-66193226 Msa1263110:CDS
AGTACCCAAAATATACAAAG+GGG 0.710749 8_2:+66192743 None:intergenic
TAACATACCCTACAACGTGG+TGG 0.753877 8_2:+66193080 None:intergenic
TGGTAACATACCCTACAACG+TGG 0.797593 8_2:+66193077 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTAAATAAAGTTCT+AGG + chr8_2:66193590-66193609 None:intergenic 10.0%
!!! AATTTTTTAAATAAAGTTCT+AGG + chr8_2:66193590-66193609 None:intergenic 10.0%
!! AAATATTTATAATGATCCAA+CGG + chr8_2:66193385-66193404 None:intergenic 15.0%
!! AAATATTTATAATGATCCAA+CGG + chr8_2:66193385-66193404 None:intergenic 15.0%
!! TAGTTTAATACAATATGAGA+GGG + chr8_2:66192525-66192544 None:intergenic 20.0%
!! TTAGTTTAATACAATATGAG+AGG + chr8_2:66192526-66192545 None:intergenic 20.0%
!!! TTTTTGAGAACAAATTCAAA+GGG + chr8_2:66192596-66192615 None:intergenic 20.0%
!! CACGACATAATTTATAAAAT+TGG + chr8_2:66193766-66193785 None:intergenic 20.0%
!! GTGTTAGTACTTTATAATTA+GGG - chr8_2:66193783-66193802 Msa1263110:intron 20.0%
!!! TAATGATATTTGAAACTTCA+AGG + chr8_2:66194701-66194720 None:intergenic 20.0%
!! TAGTTTAATACAATATGAGA+GGG + chr8_2:66192525-66192544 None:intergenic 20.0%
!! TTAGTTTAATACAATATGAG+AGG + chr8_2:66192526-66192545 None:intergenic 20.0%
!!! TTTTTGAGAACAAATTCAAA+GGG + chr8_2:66192596-66192615 None:intergenic 20.0%
!! CACGACATAATTTATAAAAT+TGG + chr8_2:66193766-66193785 None:intergenic 20.0%
!! GTGTTAGTACTTTATAATTA+GGG - chr8_2:66193783-66193802 Msa1263110:intron 20.0%
!!! TAATGATATTTGAAACTTCA+AGG + chr8_2:66194701-66194720 None:intergenic 20.0%
!!! GTTTTTGAGAACAAATTCAA+AGG + chr8_2:66192597-66192616 None:intergenic 25.0%
! TTCTCAAAAACCCATTAATT+TGG - chr8_2:66192606-66192625 Msa1263110:three_prime_UTR 25.0%
!!! TGTTTGAAGTATATGCTTTT+GGG + chr8_2:66193012-66193031 None:intergenic 25.0%
!!! ATGTTTGAAGTATATGCTTT+TGG + chr8_2:66193013-66193032 None:intergenic 25.0%
!! TGTAAGTTCATACTGTTTTA+AGG - chr8_2:66193318-66193337 Msa1263110:CDS 25.0%
! ACTCTCTATTATCAAGAATT+TGG + chr8_2:66193510-66193529 None:intergenic 25.0%
! AACAGGATAATACAATCATA+TGG + chr8_2:66193638-66193657 None:intergenic 25.0%
! CGTGTTAGTACTTTATAATT+AGG - chr8_2:66193782-66193801 Msa1263110:intron 25.0%
!! ATTCTTAATTTTCAGACACA+TGG - chr8_2:66193847-66193866 Msa1263110:intron 25.0%
!!! AGTTCTAAATGCAATAAGTT+GGG - chr8_2:66193870-66193889 Msa1263110:intron 25.0%
! TATACTTACTATGGCTTAAA+GGG + chr8_2:66194433-66194452 None:intergenic 25.0%
!!! GTTTTTGAGAACAAATTCAA+AGG + chr8_2:66192597-66192616 None:intergenic 25.0%
! TTCTCAAAAACCCATTAATT+TGG - chr8_2:66192606-66192625 Msa1263110:three_prime_UTR 25.0%
!!! TGTTTGAAGTATATGCTTTT+GGG + chr8_2:66193012-66193031 None:intergenic 25.0%
!!! ATGTTTGAAGTATATGCTTT+TGG + chr8_2:66193013-66193032 None:intergenic 25.0%
!! TGTAAGTTCATACTGTTTTA+AGG - chr8_2:66193318-66193337 Msa1263110:CDS 25.0%
! ACTCTCTATTATCAAGAATT+TGG + chr8_2:66193510-66193529 None:intergenic 25.0%
! AACAGGATAATACAATCATA+TGG + chr8_2:66193638-66193657 None:intergenic 25.0%
! CGTGTTAGTACTTTATAATT+AGG - chr8_2:66193782-66193801 Msa1263110:intron 25.0%
!! ATTCTTAATTTTCAGACACA+TGG - chr8_2:66193847-66193866 Msa1263110:intron 25.0%
!!! AGTTCTAAATGCAATAAGTT+GGG - chr8_2:66193870-66193889 Msa1263110:intron 25.0%
! TATACTTACTATGGCTTAAA+GGG + chr8_2:66194433-66194452 None:intergenic 25.0%
!! TTGCTTTTGGCCAAATTAAT+GGG + chr8_2:66192619-66192638 None:intergenic 30.0%
CTTTGCGTAAATTCTTCAAT+GGG + chr8_2:66192642-66192661 None:intergenic 30.0%
AAGAATTTACGCAAAGCAAA+GGG - chr8_2:66192646-66192665 Msa1263110:three_prime_UTR 30.0%
!! CTTTGTTGTTTGAGAATGTT+TGG + chr8_2:66192778-66192797 None:intergenic 30.0%
AATAACTGCAACAAATAGGT+GGG - chr8_2:66192898-66192917 Msa1263110:CDS 30.0%
! GAATTTTTACACAAAACCGT+TGG - chr8_2:66193366-66193385 Msa1263110:CDS 30.0%
!! TCATTATGTTGTTTCGATTG+TGG - chr8_2:66193531-66193550 Msa1263110:intron 30.0%
TGGTCATAATGTAATTGCAT+AGG - chr8_2:66193551-66193570 Msa1263110:intron 30.0%
!! AAAGTTCTAGGATTGTGATA+TGG + chr8_2:66193578-66193597 None:intergenic 30.0%
! ACACCTCAAATTTAAAGTGT+CGG + chr8_2:66193677-66193696 None:intergenic 30.0%
!! GAGTTCTAAATGCAATAAGT+TGG - chr8_2:66193869-66193888 Msa1263110:intron 30.0%
! GTTCTAAATGCAATAAGTTG+GGG - chr8_2:66193871-66193890 Msa1263110:intron 30.0%
! AGTAATAGCAAGGTATTTGA+AGG - chr8_2:66193915-66193934 Msa1263110:intron 30.0%
!! ATAGTTGGATTATCTGGTTT+TGG - chr8_2:66194000-66194019 Msa1263110:CDS 30.0%
!!! AAGTGTTTGCTCTATTTTTG+AGG - chr8_2:66194115-66194134 Msa1263110:CDS 30.0%
!! ACCATAAGTTGAGATTTTAC+TGG - chr8_2:66194148-66194167 Msa1263110:CDS 30.0%
TCCAGTAAAATCTCAACTTA+TGG + chr8_2:66194152-66194171 None:intergenic 30.0%
GTTTGTAATGCTAATGCTTA+TGG + chr8_2:66194205-66194224 None:intergenic 30.0%
! AGCATTACAAACGTTTTCAA+AGG - chr8_2:66194213-66194232 Msa1263110:CDS 30.0%
! GCATTACAAACGTTTTCAAA+GGG - chr8_2:66194214-66194233 Msa1263110:CDS 30.0%
CATGCTTACATTGGTATTAT+TGG - chr8_2:66194285-66194304 Msa1263110:CDS 30.0%
! ATTGGTATTATTGGTGCTTT+GGG - chr8_2:66194294-66194313 Msa1263110:CDS 30.0%
CTATACTTACTATGGCTTAA+AGG + chr8_2:66194434-66194453 None:intergenic 30.0%
CTTTAAGCCATAGTAAGTAT+AGG - chr8_2:66194432-66194451 Msa1263110:CDS 30.0%
CATCATTCCTATACTTACTA+TGG + chr8_2:66194442-66194461 None:intergenic 30.0%
! TTAGACCCCTTTGTATATTT+TGG - chr8_2:66194511-66194530 Msa1263110:CDS 30.0%
! TAGACCCCTTTGTATATTTT+GGG - chr8_2:66194512-66194531 Msa1263110:CDS 30.0%
AGTACCCAAAATATACAAAG+GGG + chr8_2:66194519-66194538 None:intergenic 30.0%
GAGTACCCAAAATATACAAA+GGG + chr8_2:66194520-66194539 None:intergenic 30.0%
! AGAGTACCCAAAATATACAA+AGG + chr8_2:66194521-66194540 None:intergenic 30.0%
!!! AGTCTTAGTTTTGACTTTTG+AGG - chr8_2:66194556-66194575 Msa1263110:CDS 30.0%
!!! TTTTGAGGTAATTCTTTCAC+AGG - chr8_2:66194571-66194590 Msa1263110:exon 30.0%
!! TTCACAGGATACTTACTTTT+AGG - chr8_2:66194586-66194605 Msa1263110:exon 30.0%
!! TCACAGGATACTTACTTTTA+GGG - chr8_2:66194587-66194606 Msa1263110:five_prime_UTR 30.0%
ATCATTATTGTAACGTTCTC+TGG - chr8_2:66194714-66194733 Msa1263110:five_prime_UTR 30.0%
TCATTATTGTAACGTTCTCT+GGG - chr8_2:66194715-66194734 Msa1263110:five_prime_UTR 30.0%
!! TTGCTTTTGGCCAAATTAAT+GGG + chr8_2:66192619-66192638 None:intergenic 30.0%
CTTTGCGTAAATTCTTCAAT+GGG + chr8_2:66192642-66192661 None:intergenic 30.0%
AAGAATTTACGCAAAGCAAA+GGG - chr8_2:66192646-66192665 Msa1263110:three_prime_UTR 30.0%
!! CTTTGTTGTTTGAGAATGTT+TGG + chr8_2:66192778-66192797 None:intergenic 30.0%
AATAACTGCAACAAATAGGT+GGG - chr8_2:66192898-66192917 Msa1263110:CDS 30.0%
! GAATTTTTACACAAAACCGT+TGG - chr8_2:66193366-66193385 Msa1263110:CDS 30.0%
!! TCATTATGTTGTTTCGATTG+TGG - chr8_2:66193531-66193550 Msa1263110:intron 30.0%
TGGTCATAATGTAATTGCAT+AGG - chr8_2:66193551-66193570 Msa1263110:intron 30.0%
!! AAAGTTCTAGGATTGTGATA+TGG + chr8_2:66193578-66193597 None:intergenic 30.0%
! ACACCTCAAATTTAAAGTGT+CGG + chr8_2:66193677-66193696 None:intergenic 30.0%
!! GAGTTCTAAATGCAATAAGT+TGG - chr8_2:66193869-66193888 Msa1263110:intron 30.0%
! GTTCTAAATGCAATAAGTTG+GGG - chr8_2:66193871-66193890 Msa1263110:intron 30.0%
! AGTAATAGCAAGGTATTTGA+AGG - chr8_2:66193915-66193934 Msa1263110:intron 30.0%
!! ATAGTTGGATTATCTGGTTT+TGG - chr8_2:66194000-66194019 Msa1263110:CDS 30.0%
!!! AAGTGTTTGCTCTATTTTTG+AGG - chr8_2:66194115-66194134 Msa1263110:CDS 30.0%
!! ACCATAAGTTGAGATTTTAC+TGG - chr8_2:66194148-66194167 Msa1263110:CDS 30.0%
TCCAGTAAAATCTCAACTTA+TGG + chr8_2:66194152-66194171 None:intergenic 30.0%
GTTTGTAATGCTAATGCTTA+TGG + chr8_2:66194205-66194224 None:intergenic 30.0%
! AGCATTACAAACGTTTTCAA+AGG - chr8_2:66194213-66194232 Msa1263110:CDS 30.0%
! GCATTACAAACGTTTTCAAA+GGG - chr8_2:66194214-66194233 Msa1263110:CDS 30.0%
CATGCTTACATTGGTATTAT+TGG - chr8_2:66194285-66194304 Msa1263110:CDS 30.0%
! ATTGGTATTATTGGTGCTTT+GGG - chr8_2:66194294-66194313 Msa1263110:CDS 30.0%
CTATACTTACTATGGCTTAA+AGG + chr8_2:66194434-66194453 None:intergenic 30.0%
CTTTAAGCCATAGTAAGTAT+AGG - chr8_2:66194432-66194451 Msa1263110:CDS 30.0%
CATCATTCCTATACTTACTA+TGG + chr8_2:66194442-66194461 None:intergenic 30.0%
! TTAGACCCCTTTGTATATTT+TGG - chr8_2:66194511-66194530 Msa1263110:CDS 30.0%
! TAGACCCCTTTGTATATTTT+GGG - chr8_2:66194512-66194531 Msa1263110:CDS 30.0%
AGTACCCAAAATATACAAAG+GGG + chr8_2:66194519-66194538 None:intergenic 30.0%
GAGTACCCAAAATATACAAA+GGG + chr8_2:66194520-66194539 None:intergenic 30.0%
! AGAGTACCCAAAATATACAA+AGG + chr8_2:66194521-66194540 None:intergenic 30.0%
!!! AGTCTTAGTTTTGACTTTTG+AGG - chr8_2:66194556-66194575 Msa1263110:CDS 30.0%
!!! TTTTGAGGTAATTCTTTCAC+AGG - chr8_2:66194571-66194590 Msa1263110:exon 30.0%
!! TTCACAGGATACTTACTTTT+AGG - chr8_2:66194586-66194605 Msa1263110:exon 30.0%
!! TCACAGGATACTTACTTTTA+GGG - chr8_2:66194587-66194606 Msa1263110:five_prime_UTR 30.0%
ATCATTATTGTAACGTTCTC+TGG - chr8_2:66194714-66194733 Msa1263110:five_prime_UTR 30.0%
TCATTATTGTAACGTTCTCT+GGG - chr8_2:66194715-66194734 Msa1263110:five_prime_UTR 30.0%
!!! GTTGCTTTTGGCCAAATTAA+TGG + chr8_2:66192620-66192639 None:intergenic 35.0%
!!! ATTCTTCAATGGGTTGCTTT+TGG + chr8_2:66192632-66192651 None:intergenic 35.0%
GCTTTGCGTAAATTCTTCAA+TGG + chr8_2:66192643-66192662 None:intergenic 35.0%
GAAGAATTTACGCAAAGCAA+AGG - chr8_2:66192645-66192664 Msa1263110:three_prime_UTR 35.0%
!! ATTTTAGCACCATCATGTTG+AGG - chr8_2:66192681-66192700 Msa1263110:three_prime_UTR 35.0%
TATGCTACTCAAAACACACA+AGG + chr8_2:66192717-66192736 None:intergenic 35.0%
CTGGAATAACTGCAACAAAT+AGG - chr8_2:66192894-66192913 Msa1263110:CDS 35.0%
GAATAACTGCAACAAATAGG+TGG - chr8_2:66192897-66192916 Msa1263110:CDS 35.0%
TCCATTAGTTATCCTGTTTC+TGG - chr8_2:66193064-66193083 Msa1263110:CDS 35.0%
ACCAGAAACAGGATAACTAA+TGG + chr8_2:66193068-66193087 None:intergenic 35.0%
AACCTCATTATTCTGATACG+TGG + chr8_2:66193098-66193117 None:intergenic 35.0%
!! AGTTTTGGTGAGAAGATTCA+TGG + chr8_2:66193222-66193241 None:intergenic 35.0%
ATCTTCTCACCAAAACTCTA+AGG - chr8_2:66193225-66193244 Msa1263110:CDS 35.0%
GTGTCGCATAGATATTAAAC+AGG + chr8_2:66193655-66193674 None:intergenic 35.0%
ACACCGACACTTTAAATTTG+AGG - chr8_2:66193671-66193690 Msa1263110:intron 35.0%
ACCAGATAATCCAACTATGT+AGG + chr8_2:66193998-66194017 None:intergenic 35.0%
TGCTATTGTTCTTGTAACCT+TGG - chr8_2:66194083-66194102 Msa1263110:CDS 35.0%
CTCAACTTATGGTCTTTGTT+TGG + chr8_2:66194141-66194160 None:intergenic 35.0%
! TTTCAAAGGGTTTGAAGCAT+TGG - chr8_2:66194227-66194246 Msa1263110:CDS 35.0%
! TTCAAAGGGTTTGAAGCATT+GGG - chr8_2:66194228-66194247 Msa1263110:CDS 35.0%
!!! AAGCATTGGGAGATTTTGTA+GGG - chr8_2:66194241-66194260 Msa1263110:CDS 35.0%
! CATTGGTATTATTGGTGCTT+TGG - chr8_2:66194293-66194312 Msa1263110:CDS 35.0%
! TTGGTATTATTGGTGCTTTG+GGG - chr8_2:66194295-66194314 Msa1263110:CDS 35.0%
! AAGACTTCAGATGGTGTTAA+TGG - chr8_2:66194384-66194403 Msa1263110:CDS 35.0%
GTTAATGGAGCAAATAGCTA+TGG - chr8_2:66194399-66194418 Msa1263110:CDS 35.0%
!! CACAGGATACTTACTTTTAG+GGG - chr8_2:66194588-66194607 Msa1263110:five_prime_UTR 35.0%
TAATACAATATGAGAGGGAC+AGG + chr8_2:66192520-66192539 None:intergenic 35.0%
!!! GTTGCTTTTGGCCAAATTAA+TGG + chr8_2:66192620-66192639 None:intergenic 35.0%
!!! ATTCTTCAATGGGTTGCTTT+TGG + chr8_2:66192632-66192651 None:intergenic 35.0%
GCTTTGCGTAAATTCTTCAA+TGG + chr8_2:66192643-66192662 None:intergenic 35.0%
GAAGAATTTACGCAAAGCAA+AGG - chr8_2:66192645-66192664 Msa1263110:three_prime_UTR 35.0%
!! ATTTTAGCACCATCATGTTG+AGG - chr8_2:66192681-66192700 Msa1263110:three_prime_UTR 35.0%
TATGCTACTCAAAACACACA+AGG + chr8_2:66192717-66192736 None:intergenic 35.0%
CTGGAATAACTGCAACAAAT+AGG - chr8_2:66192894-66192913 Msa1263110:CDS 35.0%
GAATAACTGCAACAAATAGG+TGG - chr8_2:66192897-66192916 Msa1263110:CDS 35.0%
TCCATTAGTTATCCTGTTTC+TGG - chr8_2:66193064-66193083 Msa1263110:CDS 35.0%
ACCAGAAACAGGATAACTAA+TGG + chr8_2:66193068-66193087 None:intergenic 35.0%
AACCTCATTATTCTGATACG+TGG + chr8_2:66193098-66193117 None:intergenic 35.0%
!! AGTTTTGGTGAGAAGATTCA+TGG + chr8_2:66193222-66193241 None:intergenic 35.0%
ATCTTCTCACCAAAACTCTA+AGG - chr8_2:66193225-66193244 Msa1263110:CDS 35.0%
GTGTCGCATAGATATTAAAC+AGG + chr8_2:66193655-66193674 None:intergenic 35.0%
ACACCGACACTTTAAATTTG+AGG - chr8_2:66193671-66193690 Msa1263110:intron 35.0%
ACCAGATAATCCAACTATGT+AGG + chr8_2:66193998-66194017 None:intergenic 35.0%
TGCTATTGTTCTTGTAACCT+TGG - chr8_2:66194083-66194102 Msa1263110:CDS 35.0%
CTCAACTTATGGTCTTTGTT+TGG + chr8_2:66194141-66194160 None:intergenic 35.0%
! TTTCAAAGGGTTTGAAGCAT+TGG - chr8_2:66194227-66194246 Msa1263110:CDS 35.0%
! TTCAAAGGGTTTGAAGCATT+GGG - chr8_2:66194228-66194247 Msa1263110:CDS 35.0%
!!! AAGCATTGGGAGATTTTGTA+GGG - chr8_2:66194241-66194260 Msa1263110:CDS 35.0%
! CATTGGTATTATTGGTGCTT+TGG - chr8_2:66194293-66194312 Msa1263110:CDS 35.0%
! TTGGTATTATTGGTGCTTTG+GGG - chr8_2:66194295-66194314 Msa1263110:CDS 35.0%
! AAGACTTCAGATGGTGTTAA+TGG - chr8_2:66194384-66194403 Msa1263110:CDS 35.0%
GTTAATGGAGCAAATAGCTA+TGG - chr8_2:66194399-66194418 Msa1263110:CDS 35.0%
!! CACAGGATACTTACTTTTAG+GGG - chr8_2:66194588-66194607 Msa1263110:five_prime_UTR 35.0%
ATTTACGCAAAGCAAAGGGA+AGG - chr8_2:66192650-66192669 Msa1263110:three_prime_UTR 40.0%
AAACGTAAGCCTCAACATGA+TGG + chr8_2:66192693-66192712 None:intergenic 40.0%
ACATGATTGAGTTTGAGCTG+AGG + chr8_2:66192750-66192769 None:intergenic 40.0%
TTGTTTCATCGTATGACCAG+TGG + chr8_2:66192844-66192863 None:intergenic 40.0%
TGGTCATACGATGAAACAAG+TGG - chr8_2:66192845-66192864 Msa1263110:CDS 40.0%
GACATAGCATACATACACAC+TGG - chr8_2:66192875-66192894 Msa1263110:CDS 40.0%
!! AACAAATAGGTGGGTTGCTT+GGG - chr8_2:66192907-66192926 Msa1263110:CDS 40.0%
ACATTGTAGACACAAGCACA+CGG - chr8_2:66193029-66193048 Msa1263110:CDS 40.0%
TGCCACGTATCAGAATAATG+AGG - chr8_2:66193093-66193112 Msa1263110:CDS 40.0%
AGAGGTTGTTCCATTTGGAA+GGG + chr8_2:66193140-66193159 None:intergenic 40.0%
AAGAGGTTGTTCCATTTGGA+AGG + chr8_2:66193141-66193160 None:intergenic 40.0%
TCCAAATGGAACAACCTCTT+TGG - chr8_2:66193141-66193160 Msa1263110:CDS 40.0%
ACCAAAGAGGTTGTTCCATT+TGG + chr8_2:66193145-66193164 None:intergenic 40.0%
! CAACCTCTTTGGTTCATGTA+TGG - chr8_2:66193152-66193171 Msa1263110:CDS 40.0%
TTGCCATACATGAACCAAAG+AGG + chr8_2:66193158-66193177 None:intergenic 40.0%
TTGGTTCATGTATGGCAAGA+TGG - chr8_2:66193160-66193179 Msa1263110:CDS 40.0%
TGGTTCATGTATGGCAAGAT+GGG - chr8_2:66193161-66193180 Msa1263110:CDS 40.0%
GATTCATGGCTATGTTCTTG+AGG + chr8_2:66193208-66193227 None:intergenic 40.0%
! CCAAGACTTCCTTAGAGTTT+TGG + chr8_2:66193237-66193256 None:intergenic 40.0%
! CCAAAACTCTAAGGAAGTCT+TGG - chr8_2:66193234-66193253 Msa1263110:CDS 40.0%
! GAAGTCTTGGATCTTGTTTC+TGG - chr8_2:66193247-66193266 Msa1263110:CDS 40.0%
!! CACATATGTAAGTACCGAGT+TGG + chr8_2:66193739-66193758 None:intergenic 40.0%
CAACTCGGTACTTACATATG+TGG - chr8_2:66193737-66193756 Msa1263110:intron 40.0%
! AGGGACGATTCTTGTTTGAT+TGG - chr8_2:66193802-66193821 Msa1263110:intron 40.0%
TGTGAAGATAGAACCAAGCA+GGG + chr8_2:66193957-66193976 None:intergenic 40.0%
ATGTGAAGATAGAACCAAGC+AGG + chr8_2:66193958-66193977 None:intergenic 40.0%
GCCTACATAGTTGGATTATC+TGG - chr8_2:66193994-66194013 Msa1263110:CDS 40.0%
!!! GGATTATCTGGTTTTGGTAC+TGG - chr8_2:66194006-66194025 Msa1263110:CDS 40.0%
!! TTTGGTACTGGTCTCAAACT+CGG - chr8_2:66194018-66194037 Msa1263110:CDS 40.0%
AAACTCGGTAGTGATTCAGA+GGG - chr8_2:66194033-66194052 Msa1263110:CDS 40.0%
AAACACTTGAAGAGTTGCCA+AGG + chr8_2:66194103-66194122 None:intergenic 40.0%
AATATCTACCACCACGTTGT+AGG - chr8_2:66194171-66194190 Msa1263110:CDS 40.0%
ATATCTACCACCACGTTGTA+GGG - chr8_2:66194172-66194191 Msa1263110:CDS 40.0%
!!! GAAGCATTGGGAGATTTTGT+AGG - chr8_2:66194240-66194259 Msa1263110:CDS 40.0%
!! AGCATTGGGAGATTTTGTAG+GGG - chr8_2:66194242-66194261 Msa1263110:CDS 40.0%
! AACTGGAAGCATGCTTACAT+TGG - chr8_2:66194276-66194295 Msa1263110:CDS 40.0%
! TGGTATTATTGGTGCTTTGG+GGG - chr8_2:66194296-66194315 Msa1263110:CDS 40.0%
ATTTACGCAAAGCAAAGGGA+AGG - chr8_2:66192650-66192669 Msa1263110:three_prime_UTR 40.0%
AAACGTAAGCCTCAACATGA+TGG + chr8_2:66192693-66192712 None:intergenic 40.0%
ACATGATTGAGTTTGAGCTG+AGG + chr8_2:66192750-66192769 None:intergenic 40.0%
TTGTTTCATCGTATGACCAG+TGG + chr8_2:66192844-66192863 None:intergenic 40.0%
TGGTCATACGATGAAACAAG+TGG - chr8_2:66192845-66192864 Msa1263110:CDS 40.0%
GACATAGCATACATACACAC+TGG - chr8_2:66192875-66192894 Msa1263110:CDS 40.0%
!! AACAAATAGGTGGGTTGCTT+GGG - chr8_2:66192907-66192926 Msa1263110:CDS 40.0%
ACATTGTAGACACAAGCACA+CGG - chr8_2:66193029-66193048 Msa1263110:CDS 40.0%
TGCCACGTATCAGAATAATG+AGG - chr8_2:66193093-66193112 Msa1263110:CDS 40.0%
AGAGGTTGTTCCATTTGGAA+GGG + chr8_2:66193140-66193159 None:intergenic 40.0%
AAGAGGTTGTTCCATTTGGA+AGG + chr8_2:66193141-66193160 None:intergenic 40.0%
TCCAAATGGAACAACCTCTT+TGG - chr8_2:66193141-66193160 Msa1263110:CDS 40.0%
ACCAAAGAGGTTGTTCCATT+TGG + chr8_2:66193145-66193164 None:intergenic 40.0%
! CAACCTCTTTGGTTCATGTA+TGG - chr8_2:66193152-66193171 Msa1263110:CDS 40.0%
TTGCCATACATGAACCAAAG+AGG + chr8_2:66193158-66193177 None:intergenic 40.0%
TTGGTTCATGTATGGCAAGA+TGG - chr8_2:66193160-66193179 Msa1263110:CDS 40.0%
TGGTTCATGTATGGCAAGAT+GGG - chr8_2:66193161-66193180 Msa1263110:CDS 40.0%
GATTCATGGCTATGTTCTTG+AGG + chr8_2:66193208-66193227 None:intergenic 40.0%
! CCAAGACTTCCTTAGAGTTT+TGG + chr8_2:66193237-66193256 None:intergenic 40.0%
! CCAAAACTCTAAGGAAGTCT+TGG - chr8_2:66193234-66193253 Msa1263110:CDS 40.0%
! GAAGTCTTGGATCTTGTTTC+TGG - chr8_2:66193247-66193266 Msa1263110:CDS 40.0%
!! CACATATGTAAGTACCGAGT+TGG + chr8_2:66193739-66193758 None:intergenic 40.0%
CAACTCGGTACTTACATATG+TGG - chr8_2:66193737-66193756 Msa1263110:intron 40.0%
! AGGGACGATTCTTGTTTGAT+TGG - chr8_2:66193802-66193821 Msa1263110:intron 40.0%
TGTGAAGATAGAACCAAGCA+GGG + chr8_2:66193957-66193976 None:intergenic 40.0%
ATGTGAAGATAGAACCAAGC+AGG + chr8_2:66193958-66193977 None:intergenic 40.0%
GCCTACATAGTTGGATTATC+TGG - chr8_2:66193994-66194013 Msa1263110:CDS 40.0%
!!! GGATTATCTGGTTTTGGTAC+TGG - chr8_2:66194006-66194025 Msa1263110:CDS 40.0%
!! TTTGGTACTGGTCTCAAACT+CGG - chr8_2:66194018-66194037 Msa1263110:CDS 40.0%
AAACTCGGTAGTGATTCAGA+GGG - chr8_2:66194033-66194052 Msa1263110:CDS 40.0%
AAACACTTGAAGAGTTGCCA+AGG + chr8_2:66194103-66194122 None:intergenic 40.0%
AATATCTACCACCACGTTGT+AGG - chr8_2:66194171-66194190 Msa1263110:CDS 40.0%
ATATCTACCACCACGTTGTA+GGG - chr8_2:66194172-66194191 Msa1263110:CDS 40.0%
!!! GAAGCATTGGGAGATTTTGT+AGG - chr8_2:66194240-66194259 Msa1263110:CDS 40.0%
!! AGCATTGGGAGATTTTGTAG+GGG - chr8_2:66194242-66194261 Msa1263110:CDS 40.0%
! AACTGGAAGCATGCTTACAT+TGG - chr8_2:66194276-66194295 Msa1263110:CDS 40.0%
! TGGTATTATTGGTGCTTTGG+GGG - chr8_2:66194296-66194315 Msa1263110:CDS 40.0%
TTTCATCGTATGACCAGTGG+AGG + chr8_2:66192841-66192860 None:intergenic 45.0%
!! CAACAAATAGGTGGGTTGCT+TGG - chr8_2:66192906-66192925 Msa1263110:CDS 45.0%
! ATATGCTTTTGGGCTTCCAC+TGG + chr8_2:66193002-66193021 None:intergenic 45.0%
GCAACTTTGACCCTTCCAAA+TGG - chr8_2:66193127-66193146 Msa1263110:CDS 45.0%
GGTTCATGTATGGCAAGATG+GGG - chr8_2:66193162-66193181 Msa1263110:CDS 45.0%
!! TGTAAGTACCGAGTTGGTGT+TGG + chr8_2:66193733-66193752 None:intergenic 45.0%
!! CTTGCTATTACTGCTCCTGT+TGG + chr8_2:66193907-66193926 None:intergenic 45.0%
CAACAGGAGCAGTAATAGCA+AGG - chr8_2:66193905-66193924 Msa1263110:intron 45.0%
CAAGTCTCTGCCTACATAGT+TGG - chr8_2:66193985-66194004 Msa1263110:CDS 45.0%
CAAACTCGGTAGTGATTCAG+AGG - chr8_2:66194032-66194051 Msa1263110:CDS 45.0%
TAACATACCCTACAACGTGG+TGG + chr8_2:66194182-66194201 None:intergenic 45.0%
TGGTAACATACCCTACAACG+TGG + chr8_2:66194185-66194204 None:intergenic 45.0%
TAGGGGATCGTTACAAGAAC+TGG - chr8_2:66194259-66194278 Msa1263110:CDS 45.0%
! GGTATTATTGGTGCTTTGGG+GGG - chr8_2:66194297-66194316 Msa1263110:CDS 45.0%
!! TCCTTTTGGAAGCTTACACG+TGG - chr8_2:66194328-66194347 Msa1263110:CDS 45.0%
TCCACGTGTAAGCTTCCAAA+AGG + chr8_2:66194332-66194351 None:intergenic 45.0%
TTTGGAAGCTTACACGTGGA+TGG - chr8_2:66194332-66194351 Msa1263110:CDS 45.0%
GCAGAGAACAAGACTTCAGA+TGG - chr8_2:66194375-66194394 Msa1263110:CDS 45.0%
! CAACACCTTTCTTCGGTTTG+TGG - chr8_2:66194740-66194759 Msa1263110:five_prime_UTR 45.0%
TTTCATCGTATGACCAGTGG+AGG + chr8_2:66192841-66192860 None:intergenic 45.0%
!! CAACAAATAGGTGGGTTGCT+TGG - chr8_2:66192906-66192925 Msa1263110:CDS 45.0%
! ATATGCTTTTGGGCTTCCAC+TGG + chr8_2:66193002-66193021 None:intergenic 45.0%
GCAACTTTGACCCTTCCAAA+TGG - chr8_2:66193127-66193146 Msa1263110:CDS 45.0%
GGTTCATGTATGGCAAGATG+GGG - chr8_2:66193162-66193181 Msa1263110:CDS 45.0%
!! TGTAAGTACCGAGTTGGTGT+TGG + chr8_2:66193733-66193752 None:intergenic 45.0%
!! CTTGCTATTACTGCTCCTGT+TGG + chr8_2:66193907-66193926 None:intergenic 45.0%
CAACAGGAGCAGTAATAGCA+AGG - chr8_2:66193905-66193924 Msa1263110:intron 45.0%
CAAGTCTCTGCCTACATAGT+TGG - chr8_2:66193985-66194004 Msa1263110:CDS 45.0%
CAAACTCGGTAGTGATTCAG+AGG - chr8_2:66194032-66194051 Msa1263110:CDS 45.0%
TAACATACCCTACAACGTGG+TGG + chr8_2:66194182-66194201 None:intergenic 45.0%
TGGTAACATACCCTACAACG+TGG + chr8_2:66194185-66194204 None:intergenic 45.0%
TAGGGGATCGTTACAAGAAC+TGG - chr8_2:66194259-66194278 Msa1263110:CDS 45.0%
! GGTATTATTGGTGCTTTGGG+GGG - chr8_2:66194297-66194316 Msa1263110:CDS 45.0%
!! TCCTTTTGGAAGCTTACACG+TGG - chr8_2:66194328-66194347 Msa1263110:CDS 45.0%
TCCACGTGTAAGCTTCCAAA+AGG + chr8_2:66194332-66194351 None:intergenic 45.0%
TTTGGAAGCTTACACGTGGA+TGG - chr8_2:66194332-66194351 Msa1263110:CDS 45.0%
GCAGAGAACAAGACTTCAGA+TGG - chr8_2:66194375-66194394 Msa1263110:CDS 45.0%
! CAACACCTTTCTTCGGTTTG+TGG - chr8_2:66194740-66194759 Msa1263110:five_prime_UTR 45.0%
TACGCAAAGCAAAGGGAAGG+AGG - chr8_2:66192653-66192672 Msa1263110:three_prime_UTR 50.0%
! TGGAGGTACGAGGTTAACTG+TGG + chr8_2:66192824-66192843 None:intergenic 50.0%
AGTTAACCTCGTACCTCCAC+TGG - chr8_2:66192825-66192844 Msa1263110:exon 50.0%
!! AAGGGTGCTGCTTGGATTGA+TGG + chr8_2:66192933-66192952 None:intergenic 50.0%
CAAAGCTTGTGCTCCGATCA+TGG + chr8_2:66192963-66192982 None:intergenic 50.0%
CATGATCGGAGCACAAGCTT+TGG - chr8_2:66192961-66192980 Msa1263110:CDS 50.0%
ACAAGCACACGGTTGCAAGA+AGG - chr8_2:66193040-66193059 Msa1263110:CDS 50.0%
GTGGCAGACAAACCAGAAAC+AGG + chr8_2:66193079-66193098 None:intergenic 50.0%
ACCAATCCCACTTGCAGCTT+GGG + chr8_2:66193278-66193297 None:intergenic 50.0%
AACCAATCCCACTTGCAGCT+TGG + chr8_2:66193279-66193298 None:intergenic 50.0%
CGGACTACACTAACACGTGT+TGG + chr8_2:66193709-66193728 None:intergenic 50.0%
TAGTCCGACCAACACCAACT+CGG - chr8_2:66193722-66193741 Msa1263110:intron 50.0%
!! AGTACCGAGTTGGTGTTGGT+CGG + chr8_2:66193729-66193748 None:intergenic 50.0%
TGGGGAATCTTGATGCCAAC+AGG - chr8_2:66193889-66193908 Msa1263110:intron 50.0%
ATAGAACCAAGCAGGGTCTG+CGG + chr8_2:66193950-66193969 None:intergenic 50.0%
CTGGGAGCAACACCTTTCTT+CGG - chr8_2:66194733-66194752 Msa1263110:five_prime_UTR 50.0%
TACGCAAAGCAAAGGGAAGG+AGG - chr8_2:66192653-66192672 Msa1263110:three_prime_UTR 50.0%
! TGGAGGTACGAGGTTAACTG+TGG + chr8_2:66192824-66192843 None:intergenic 50.0%
AGTTAACCTCGTACCTCCAC+TGG - chr8_2:66192825-66192844 Msa1263110:exon 50.0%
!! AAGGGTGCTGCTTGGATTGA+TGG + chr8_2:66192933-66192952 None:intergenic 50.0%
CAAAGCTTGTGCTCCGATCA+TGG + chr8_2:66192963-66192982 None:intergenic 50.0%
CATGATCGGAGCACAAGCTT+TGG - chr8_2:66192961-66192980 Msa1263110:CDS 50.0%
ACAAGCACACGGTTGCAAGA+AGG - chr8_2:66193040-66193059 Msa1263110:CDS 50.0%
GTGGCAGACAAACCAGAAAC+AGG + chr8_2:66193079-66193098 None:intergenic 50.0%
ACCAATCCCACTTGCAGCTT+GGG + chr8_2:66193278-66193297 None:intergenic 50.0%
AACCAATCCCACTTGCAGCT+TGG + chr8_2:66193279-66193298 None:intergenic 50.0%
CGGACTACACTAACACGTGT+TGG + chr8_2:66193709-66193728 None:intergenic 50.0%
TAGTCCGACCAACACCAACT+CGG - chr8_2:66193722-66193741 Msa1263110:intron 50.0%
!! AGTACCGAGTTGGTGTTGGT+CGG + chr8_2:66193729-66193748 None:intergenic 50.0%
TGGGGAATCTTGATGCCAAC+AGG - chr8_2:66193889-66193908 Msa1263110:intron 50.0%
ATAGAACCAAGCAGGGTCTG+CGG + chr8_2:66193950-66193969 None:intergenic 50.0%
CTGGGAGCAACACCTTTCTT+CGG - chr8_2:66194733-66194752 Msa1263110:five_prime_UTR 50.0%
! GTATGACCAGTGGAGGTACG+AGG + chr8_2:66192834-66192853 None:intergenic 55.0%
ACCCTTGACCCAGCCATGAT+CGG - chr8_2:66192947-66192966 Msa1263110:CDS 55.0%
TCCGATCATGGCTGGGTCAA+GGG + chr8_2:66192951-66192970 None:intergenic 55.0%
CTTGTGCTCCGATCATGGCT+GGG + chr8_2:66192958-66192977 None:intergenic 55.0%
! GATCGGAGCACAAGCTTTGG+TGG - chr8_2:66192964-66192983 Msa1263110:CDS 55.0%
GTGGCTATTCCACAAGCCAG+TGG - chr8_2:66192983-66193002 Msa1263110:CDS 55.0%
!! TTTGGGCTTCCACTGGCTTG+TGG + chr8_2:66192995-66193014 None:intergenic 55.0%
GTACCTCCCAAGCTGCAAGT+GGG - chr8_2:66193269-66193288 Msa1263110:CDS 55.0%
AATCCCACTTGCAGCTTGGG+AGG + chr8_2:66193275-66193294 None:intergenic 55.0%
TCCCAAGCTGCAAGTGGGAT+TGG - chr8_2:66193274-66193293 Msa1263110:CDS 55.0%
TCAAATCCGCAGACCCTGCT+TGG - chr8_2:66193941-66193960 Msa1263110:intron 55.0%
! GTATGACCAGTGGAGGTACG+AGG + chr8_2:66192834-66192853 None:intergenic 55.0%
ACCCTTGACCCAGCCATGAT+CGG - chr8_2:66192947-66192966 Msa1263110:CDS 55.0%
TCCGATCATGGCTGGGTCAA+GGG + chr8_2:66192951-66192970 None:intergenic 55.0%
CTTGTGCTCCGATCATGGCT+GGG + chr8_2:66192958-66192977 None:intergenic 55.0%
! GATCGGAGCACAAGCTTTGG+TGG - chr8_2:66192964-66192983 Msa1263110:CDS 55.0%
GTGGCTATTCCACAAGCCAG+TGG - chr8_2:66192983-66193002 Msa1263110:CDS 55.0%
!! TTTGGGCTTCCACTGGCTTG+TGG + chr8_2:66192995-66193014 None:intergenic 55.0%
GTACCTCCCAAGCTGCAAGT+GGG - chr8_2:66193269-66193288 Msa1263110:CDS 55.0%
AATCCCACTTGCAGCTTGGG+AGG + chr8_2:66193275-66193294 None:intergenic 55.0%
TCCCAAGCTGCAAGTGGGAT+TGG - chr8_2:66193274-66193293 Msa1263110:CDS 55.0%
TCAAATCCGCAGACCCTGCT+TGG - chr8_2:66193941-66193960 Msa1263110:intron 55.0%
CTCCGATCATGGCTGGGTCA+AGG + chr8_2:66192952-66192971 None:intergenic 60.0%
GCTTGTGCTCCGATCATGGC+TGG + chr8_2:66192959-66192978 None:intergenic 60.0%
GGTACCTCCCAAGCTGCAAG+TGG - chr8_2:66193268-66193287 Msa1263110:CDS 60.0%
!!! GGGGGGCATTGCTGTCCTTT+TGG - chr8_2:66194314-66194333 Msa1263110:CDS 60.0%
CTCCGATCATGGCTGGGTCA+AGG + chr8_2:66192952-66192971 None:intergenic 60.0%
GCTTGTGCTCCGATCATGGC+TGG + chr8_2:66192959-66192978 None:intergenic 60.0%
GGTACCTCCCAAGCTGCAAG+TGG - chr8_2:66193268-66193287 Msa1263110:CDS 60.0%
!!! GGGGGGCATTGCTGTCCTTT+TGG - chr8_2:66194314-66194333 Msa1263110:CDS 60.0%
!! GCTGGGTCAAGGGTGCTGCT+TGG + chr8_2:66192941-66192960 None:intergenic 65.0%
!! GCTGGGTCAAGGGTGCTGCT+TGG + chr8_2:66192941-66192960 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 66192518 66194763 66192518 ID=Msa1263110;Name=Msa1263110
chr8_2 mRNA 66192518 66194763 66192518 ID=Msa1263110-mRNA-1;Parent=Msa1263110;Name=Msa1263110-mRNA-1;_AED=0.00;_eAED=0.00;_QI=177|1|1|1|1|1|2|326|399
chr8_2 exon 66192518 66193419 66192518 ID=Msa1263110-mRNA-1:exon:21582;Parent=Msa1263110-mRNA-1
chr8_2 exon 66193963 66194763 66193963 ID=Msa1263110-mRNA-1:exon:21581;Parent=Msa1263110-mRNA-1
chr8_2 five_prime_UTR 66194587 66194763 66194587 ID=Msa1263110-mRNA-1:five_prime_utr;Parent=Msa1263110-mRNA-1
chr8_2 CDS 66193963 66194586 66193963 ID=Msa1263110-mRNA-1:cds;Parent=Msa1263110-mRNA-1
chr8_2 CDS 66192844 66193419 66192844 ID=Msa1263110-mRNA-1:cds;Parent=Msa1263110-mRNA-1
chr8_2 three_prime_UTR 66192518 66192843 66192518 ID=Msa1263110-mRNA-1:three_prime_utr;Parent=Msa1263110-mRNA-1
Gene Sequence

>Msa1263110

ATGTTGAGGCTTACGTTTGCCTTGTGTGTTTTGAGTAGCATAATTTTGACATCCTCAGCTCAAACTCAATCATGTAAAAACCAAACATTCTCAAACAACAAAGCATTCACAACATGTCGTGATCTTCCACAGTTAACCTCGTACCTCCACTGGTCATACGATGAAACAAGTGGCAAATTAGACATAGCATACATACACACTGGAATAACTGCAACAAATAGGTGGGTTGCTTGGGCCATCAATCCAAGCAGCACCCTTGACCCAGCCATGATCGGAGCACAAGCTTTGGTGGCTATTCCACAAGCCAGTGGAAGCCCAAAAGCATATACTTCAAACATTGTAGACACAAGCACACGGTTGCAAGAAGGATCCATTAGTTATCCTGTTTCTGGTTTGTCTGCCACGTATCAGAATAATGAGGTTACTATTTTTGCAACTTTGACCCTTCCAAATGGAACAACCTCTTTGGTTCATGTATGGCAAGATGGGGTTCTCTCTTCTGATTCTACTCCTCAAGAACATAGCCATGAATCTTCTCACCAAAACTCTAAGGAAGTCTTGGATCTTGTTTCTGGTACCTCCCAAGCTGCAAGTGGGATTGGTTCGCGTCAAAGAAGAAGAAATACACATGGAGTTCTAAATGCAATAAGTTGGGGAATCTTGATGCCAACAGGAGCAGTAATAGCAAGGTATTTGAAGGTGTTCAAATCCGCAGACCCTGCTTGGTTCTATCTTCACATAACTTGTCAAGTCTCTGCCTACATAGTTGGATTATCTGGTTTTGGTACTGGTCTCAAACTCGGTAGTGATTCAGAGGGTATTACATACGACACTCATAGAGCACTTGCTATTGTTCTTGTAACCTTGGCAACTCTTCAAGTGTTTGCTCTATTTTTGAGGCCAAACAAAGACCATAAGTTGAGATTTTACTGGAATATCTACCACCACGTTGTAGGGTATGTTACCATAAGCATTAGCATTACAAACGTTTTCAAAGGGTTTGAAGCATTGGGAGATTTTGTAGGGGATCGTTACAAGAACTGGAAGCATGCTTACATTGGTATTATTGGTGCTTTGGGGGGCATTGCTGTCCTTTTGGAAGCTTACACGTGGATGGTGTGCATGAAGAGAAAGAAAGCAGAGAACAAGACTTCAGATGGTGTTAATGGAGCAAATAGCTATGGTTCTTCTACCCTTTAA

Protein sequence

>Msa1263110

MLRLTFALCVLSSIILTSSAQTQSCKNQTFSNNKAFTTCRDLPQLTSYLHWSYDETSGKLDIAYIHTGITATNRWVAWAINPSSTLDPAMIGAQALVAIPQASGSPKAYTSNIVDTSTRLQEGSISYPVSGLSATYQNNEVTIFATLTLPNGTTSLVHVWQDGVLSSDSTPQEHSHESSHQNSKEVLDLVSGTSQAASGIGSRQRRRNTHGVLNAISWGILMPTGAVIARYLKVFKSADPAWFYLHITCQVSAYIVGLSGFGTGLKLGSDSEGITYDTHRALAIVLVTLATLQVFALFLRPNKDHKLRFYWNIYHHVVGYVTISISITNVFKGFEALGDFVGDRYKNWKHAYIGIIGALGGIAVLLEAYTWMVCMKRKKAENKTSDGVNGANSYGSSTL*