Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847210 | XP_013453837.1 | 85.323 | 402 | 7 | 1 | 1 | 350 | 27 | 428 | 0.0 | 674 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847210 | sp|Q9ZQ89|UPS2_ARATH | 69.327 | 401 | 68 | 3 | 1 | 349 | 1 | 398 | 0.0 | 535 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847210 | A0A072UFK6 | 85.323 | 402 | 7 | 1 | 1 | 350 | 27 | 428 | 0.0 | 674 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044090 | Msa0847210 | 0.803435 | 3.490447e-49 | -8.615850e-47 |
| Msa0756320 | Msa0847210 | 0.809928 | 1.484811e-50 | -8.615850e-47 |
| Msa0763890 | Msa0847210 | 0.805785 | 1.128546e-49 | -8.615850e-47 |
| Msa0763920 | Msa0847210 | 0.803433 | 3.494645e-49 | -8.615850e-47 |
| Msa0801780 | Msa0847210 | 0.800273 | 1.557225e-48 | -8.615850e-47 |
| Msa0226180 | Msa0847210 | 0.807690 | 4.469306e-50 | -8.615850e-47 |
| Msa0236420 | Msa0847210 | 0.824462 | 7.966912e-54 | -8.615850e-47 |
| Msa0371950 | Msa0847210 | 0.801500 | 8.746355e-49 | -8.615850e-47 |
| Msa0455760 | Msa0847210 | 0.819376 | 1.199587e-52 | -8.615850e-47 |
| Msa0270960 | Msa0847210 | 0.824642 | 7.225815e-54 | -8.615850e-47 |
| Msa0557410 | Msa0847210 | 0.812769 | 3.588205e-51 | -8.615850e-47 |
| Msa0559500 | Msa0847210 | 0.807972 | 3.893505e-50 | -8.615850e-47 |
| Msa0582180 | Msa0847210 | 0.823161 | 1.607566e-53 | -8.615850e-47 |
| Msa0847210 | Msa0952040 | 0.810435 | 1.154473e-50 | -8.615850e-47 |
| Msa0847210 | Msa1346080 | 0.810162 | 1.321942e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847210 | MtrunA17_Chr5g0419571 | 85.323 | 402 | 7 | 1 | 1 | 350 | 27 | 428 | 0.0 | 674 |
| Msa0847210 | MtrunA17_Chr5g0419251 | 69.383 | 405 | 60 | 5 | 1 | 349 | 1 | 397 | 0.0 | 540 |
| Msa0847210 | MtrunA17_Chr5g0419581 | 66.832 | 404 | 76 | 4 | 1 | 349 | 1 | 401 | 1.11e-178 | 501 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847210 | AT2G03530.2 | 69.327 | 401 | 68 | 3 | 1 | 349 | 1 | 398 | 0.0 | 535 |
| Msa0847210 | AT2G03530.1 | 69.327 | 401 | 68 | 3 | 1 | 349 | 1 | 398 | 0.0 | 535 |
| Msa0847210 | AT2G03530.4 | 68.602 | 379 | 64 | 3 | 1 | 327 | 1 | 376 | 1.63e-178 | 503 |
| Msa0847210 | AT2G03590.2 | 64.090 | 401 | 81 | 4 | 1 | 349 | 1 | 390 | 7.50e-175 | 491 |
| Msa0847210 | AT2G03590.1 | 64.090 | 401 | 81 | 4 | 1 | 349 | 1 | 390 | 7.50e-175 | 491 |
| Msa0847210 | AT2G03520.1 | 61.347 | 401 | 103 | 1 | 1 | 349 | 1 | 401 | 1.23e-168 | 476 |
| Msa0847210 | AT1G26440.3 | 58.065 | 403 | 113 | 3 | 1 | 349 | 9 | 409 | 9.80e-148 | 423 |
| Msa0847210 | AT1G26440.2 | 58.065 | 403 | 113 | 3 | 1 | 349 | 9 | 409 | 9.80e-148 | 423 |
| Msa0847210 | AT2G03530.5 | 64.241 | 316 | 58 | 3 | 86 | 349 | 1 | 313 | 5.29e-132 | 379 |
| Msa0847210 | AT2G03530.3 | 64.241 | 316 | 58 | 3 | 86 | 349 | 1 | 313 | 5.29e-132 | 379 |
| Msa0847210 | AT2G03600.6 | 67.528 | 271 | 73 | 2 | 1 | 271 | 1 | 256 | 8.02e-130 | 372 |
| Msa0847210 | AT2G03600.1 | 67.528 | 271 | 73 | 2 | 1 | 271 | 1 | 256 | 8.02e-130 | 372 |
| Msa0847210 | AT2G03600.2 | 62.245 | 294 | 73 | 3 | 1 | 271 | 1 | 279 | 5.55e-124 | 358 |
| Msa0847210 | AT2G03600.4 | 60.841 | 309 | 97 | 5 | 1 | 303 | 1 | 291 | 1.94e-122 | 356 |
| Msa0847210 | AT1G26440.6 | 51.613 | 403 | 104 | 4 | 1 | 349 | 9 | 374 | 2.46e-122 | 357 |
| Msa0847210 | AT1G26440.1 | 51.861 | 403 | 102 | 4 | 1 | 349 | 9 | 373 | 5.04e-122 | 357 |
| Msa0847210 | AT2G03600.5 | 59.672 | 305 | 99 | 4 | 1 | 303 | 1 | 283 | 2.29e-120 | 350 |
| Msa0847210 | AT1G26440.7 | 54.799 | 323 | 92 | 2 | 79 | 349 | 16 | 336 | 1.62e-109 | 323 |
| Msa0847210 | AT1G26440.8 | 54.799 | 323 | 92 | 2 | 79 | 349 | 16 | 336 | 1.62e-109 | 323 |
| Msa0847210 | AT1G26440.5 | 46.749 | 323 | 83 | 3 | 79 | 349 | 16 | 301 | 5.70e-84 | 257 |
| Msa0847210 | AT2G03600.3 | 65.054 | 186 | 53 | 1 | 86 | 271 | 1 | 174 | 9.76e-78 | 236 |
| Msa0847210 | AT1G26440.4 | 48.062 | 258 | 80 | 2 | 144 | 349 | 92 | 347 | 4.53e-64 | 207 |
| Msa0847210 | AT1G26440.4 | 73.913 | 92 | 22 | 1 | 1 | 90 | 9 | 100 | 7.14e-35 | 131 |
Find 85 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTAATAGCTTATCATTTA+AGG | 0.122493 | 5_4:-28767789 | Msa0847210:five_prime_UTR |
| GCAAGTTGAGTTAAGAAATT+TGG | 0.189492 | 5_4:+28767469 | None:intergenic |
| ATAAGCTATTAGGACCTATT+TGG | 0.225422 | 5_4:+28767798 | None:intergenic |
| TTACTCAATCACCAATTTCT+TGG | 0.250935 | 5_4:-28767548 | Msa0847210:CDS |
| TGAGAACAGAAGAGCTATTA+AGG | 0.268133 | 5_4:-28765780 | Msa0847210:intron |
| ATTGTTACTTGCAGGATAAT+TGG | 0.271037 | 5_4:-28767047 | Msa0847210:intron |
| TTCCACTTGTGAGCACGTTT+TGG | 0.272689 | 5_4:-28765056 | Msa0847210:CDS |
| TGTTGAGTTGAAAATGTATT+TGG | 0.308041 | 5_4:-28767692 | Msa0847210:exon |
| CCCAAATGTATATAGTAATA+AGG | 0.311408 | 5_4:-28764858 | Msa0847210:three_prime_UTR |
| ACCTTATTACTATATACATT+TGG | 0.319270 | 5_4:+28764857 | None:intergenic |
| TCCTTAAATGATAAGCTATT+AGG | 0.325315 | 5_4:+28767788 | None:intergenic |
| GCAAGCATAACTGTTGTTAT+AGG | 0.325327 | 5_4:-28766916 | Msa0847210:intron |
| ATTAAGTTGGTTATCCAAAT+AGG | 0.327675 | 5_4:-28767812 | Msa0847210:five_prime_UTR |
| GATAATAGCAGCCAAGAAAT+TGG | 0.327869 | 5_4:+28767537 | None:intergenic |
| ATTATCATTGCGTTTACATT+TGG | 0.351856 | 5_4:-28767520 | Msa0847210:CDS |
| CCTTATTACTATATACATTT+GGG | 0.355537 | 5_4:+28764858 | None:intergenic |
| ACATTTGGTCAGATAGGAAA+TGG | 0.356798 | 5_4:-28767505 | Msa0847210:CDS |
| AGGAAGAACATATATCTTAC+TGG | 0.373403 | 5_4:-28764998 | Msa0847210:CDS |
| ATCTAATACTGACGATAATC+AGG | 0.373925 | 5_4:-28766603 | Msa0847210:CDS |
| GCGTTTACATTTGGTCAGAT+AGG | 0.379460 | 5_4:-28767511 | Msa0847210:CDS |
| CAGTATGCATTTGCTCTAGT+TGG | 0.397774 | 5_4:-28766964 | Msa0847210:CDS |
| GGTGTGCTCATGGCATCATC+AGG | 0.399673 | 5_4:-28764943 | Msa0847210:CDS |
| TGGGAGTTCAAACTAATCAT+TGG | 0.406397 | 5_4:+28764877 | None:intergenic |
| GGTGGTGTGGTCCTTAGCCT+TGG | 0.413336 | 5_4:-28767000 | Msa0847210:CDS |
| ATAGCTTATATAAATTAAGT+TGG | 0.418321 | 5_4:-28767825 | None:intergenic |
| TTTCTTAACTCAACTTGCTC+AGG | 0.423669 | 5_4:-28767464 | Msa0847210:intron |
| GGCGGTGTAAACATTCAAAT+GGG | 0.433994 | 5_4:+28765527 | None:intergenic |
| AGGCGGTGTAAACATTCAAA+TGG | 0.435148 | 5_4:+28765526 | None:intergenic |
| GCTAGGGACTCTTTGAAAGA+AGG | 0.439005 | 5_4:-28765981 | Msa0847210:intron |
| CTCAGAAATTGAACTAATCA+AGG | 0.443307 | 5_4:+28767726 | None:intergenic |
| TTTATGTTTATTGTGGCTGT+TGG | 0.443744 | 5_4:-28764964 | Msa0847210:CDS |
| TTTGGGAAAAGACCTTTGAT+TGG | 0.450542 | 5_4:-28765651 | Msa0847210:CDS |
| GAGAGCAAGGGAGGTGCCAT+AGG | 0.456449 | 5_4:-28767667 | Msa0847210:CDS |
| TTGGGAAAAGACCTTTGATT+GGG | 0.457446 | 5_4:-28765650 | Msa0847210:CDS |
| TGTGGCTGTTGGTGTGCTCA+TGG | 0.472927 | 5_4:-28764953 | Msa0847210:CDS |
| GATTCCAGCGAAGAAAACTA+TGG | 0.475490 | 5_4:+28765623 | None:intergenic |
| GGAGAATATAGGAAATCATC+AGG | 0.478060 | 5_4:-28765018 | Msa0847210:CDS |
| AATGTATTTGGTGGAGAGCA+AGG | 0.480973 | 5_4:-28767680 | Msa0847210:CDS |
| GTGGTGTGGTCCTTAGCCTT+GGG | 0.483800 | 5_4:-28766999 | Msa0847210:CDS |
| TCAGTAATGTTTGCAATGGC+AGG | 0.486775 | 5_4:-28767021 | Msa0847210:CDS |
| AGTATGCATTTGCTCTAGTT+GGG | 0.489967 | 5_4:-28766963 | Msa0847210:CDS |
| AGTTCAAGACAGGGTGGTAA+AGG | 0.491004 | 5_4:+28765448 | None:intergenic |
| CATTTGGTCAGATAGGAAAT+GGG | 0.496722 | 5_4:-28767504 | Msa0847210:CDS |
| TATTACACGAATGTTAACTT+TGG | 0.502101 | 5_4:+28764755 | None:intergenic |
| TGTAATAAAATATTTATCCA+AGG | 0.512134 | 5_4:-28764739 | None:intergenic |
| TGCCATAGGGTGCATGCTGT+TGG | 0.512313 | 5_4:-28767653 | Msa0847210:CDS |
| AGCCAACAGCATGCACCCTA+TGG | 0.513094 | 5_4:+28767651 | None:intergenic |
| TATGTTGTTTATGTTTATTG+TGG | 0.518587 | 5_4:-28764971 | Msa0847210:CDS |
| TTTGTTGCTAAGTTGAATGC+TGG | 0.524858 | 5_4:+28765582 | None:intergenic |
| CTGTATTGACTCTGTTAGAA+AGG | 0.527795 | 5_4:-28767603 | Msa0847210:CDS |
| TGAGTTGAAAATGTATTTGG+TGG | 0.530800 | 5_4:-28767689 | Msa0847210:exon |
| CCCCAAAACGTGCTCACAAG+TGG | 0.530803 | 5_4:+28765054 | None:intergenic |
| GGAAGAACATATATCTTACT+GGG | 0.545902 | 5_4:-28764997 | Msa0847210:CDS |
| ATTTGCTCTAGTTGGGCTGT+CGG | 0.550748 | 5_4:-28766956 | Msa0847210:CDS |
| TTAAATAATAGTTAAATCGA+AGG | 0.562637 | 5_4:-28765870 | Msa0847210:intron |
| GCCCTCAGTAATGTTTGCAA+TGG | 0.568356 | 5_4:-28767025 | Msa0847210:CDS |
| ATGTATTTGGTGGAGAGCAA+GGG | 0.570462 | 5_4:-28767679 | Msa0847210:CDS |
| TGGACAGATTCCCAAGGCTA+AGG | 0.573485 | 5_4:+28766989 | None:intergenic |
| AAATCGAAGGATCTTGAAAG+TGG | 0.573772 | 5_4:-28765857 | Msa0847210:CDS |
| GGTGATTGAGTAATCGAGGT+AGG | 0.575423 | 5_4:+28767558 | None:intergenic |
| GTTTGCAATGGCAGGTGGTG+TGG | 0.575901 | 5_4:-28767013 | Msa0847210:CDS |
| TCTAACAGAGTCAATACAGC+AGG | 0.576923 | 5_4:+28767607 | None:intergenic |
| GGTAGGTATGCTGAGGAAGA+CGG | 0.584747 | 5_4:+28767575 | None:intergenic |
| CGATAATCAGGCTAAGCTCA+AGG | 0.590226 | 5_4:-28766591 | Msa0847210:CDS |
| TCATGGCATCATCAGGGCAC+AGG | 0.595088 | 5_4:-28764936 | Msa0847210:CDS |
| TATGCTTGCTGTAATCACTT+CGG | 0.598723 | 5_4:+28766930 | None:intergenic |
| TCTTTGAAAGAAGGAAACAT+AGG | 0.600384 | 5_4:-28765972 | Msa0847210:intron |
| ACTATGGTTAACCCAATCAA+AGG | 0.601160 | 5_4:+28765639 | None:intergenic |
| AATTGGTGATTGAGTAATCG+AGG | 0.601775 | 5_4:+28767554 | None:intergenic |
| GTGTGCTCATGGCATCATCA+GGG | 0.603350 | 5_4:-28764942 | Msa0847210:CDS |
| AGAGCAAGGGAGGTGCCATA+GGG | 0.611608 | 5_4:-28767666 | Msa0847210:CDS |
| GCCATTGCAAACATTACTGA+GGG | 0.615245 | 5_4:+28767024 | None:intergenic |
| TGCCATTGCAAACATTACTG+AGG | 0.624016 | 5_4:+28767023 | None:intergenic |
| TATTTGGTGGAGAGCAAGGG+AGG | 0.652359 | 5_4:-28767676 | Msa0847210:CDS |
| TGATTAGTTCAATTTCTGAG+AGG | 0.660284 | 5_4:-28767723 | Msa0847210:five_prime_UTR |
| TTGACTCTGTTAGAAAGGCG+AGG | 0.664406 | 5_4:-28767598 | Msa0847210:CDS |
| TAATCGAGGTAGGTATGCTG+AGG | 0.665561 | 5_4:+28767568 | None:intergenic |
| TGAAAGTGGAAGCAATTCTG+CGG | 0.679325 | 5_4:-28765843 | Msa0847210:CDS |
| AGAAATTGAACTAATCAAGG+AGG | 0.679840 | 5_4:+28767729 | None:intergenic |
| GTAATGTTTGCAATGGCAGG+TGG | 0.686758 | 5_4:-28767018 | Msa0847210:CDS |
| GCGGTGTAAACATTCAAATG+GGG | 0.703564 | 5_4:+28765528 | None:intergenic |
| TAGAGCAAATGCATACTGTG+TGG | 0.706616 | 5_4:+28766969 | None:intergenic |
| GAAGAACATATATCTTACTG+GGG | 0.713784 | 5_4:-28764996 | Msa0847210:CDS |
| ACTTAGCAACAAATGACCAG+TGG | 0.727226 | 5_4:-28765572 | Msa0847210:CDS |
| ACTGTGTGGACAGATTCCCA+AGG | 0.729854 | 5_4:+28766983 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGGAAAATATTATTTATTA+AGG | - | chr5_4:28765147-28765166 | Msa0847210:intron | 10.0% |
| !!! | ATGAATATTTTTCATTGTAA+TGG | - | chr5_4:28765278-28765297 | Msa0847210:intron | 15.0% |
| !!! | ATAAATTGGTTTTGAAATAT+TGG | - | chr5_4:28765363-28765382 | Msa0847210:intron | 15.0% |
| !!! | TAAATTGGTTTTGAAATATT+GGG | - | chr5_4:28765364-28765383 | Msa0847210:intron | 15.0% |
| !! | ATGTAAATAAATCTTTCTAA+AGG | - | chr5_4:28766221-28766240 | Msa0847210:intron | 15.0% |
| !! | AATTGAAACTATAAATTACA+AGG | + | chr5_4:28766485-28766504 | None:intergenic | 15.0% |
| !! | CTATTATTTAAACATTGAAA+AGG | + | chr5_4:28766678-28766697 | None:intergenic | 15.0% |
| !! | TTAAATAATAGTTAAATCGA+AGG | - | chr5_4:28766687-28766706 | Msa0847210:CDS | 15.0% |
| !! | TCATCATTAACAAATTATTT+GGG | - | chr5_4:28767140-28767159 | Msa0847210:intron | 15.0% |
| !! | TTAGATATATTGAGAAAATT+AGG | + | chr5_4:28767410-28767429 | None:intergenic | 15.0% |
| !! | TTGTGTTATCATAAGAAAAT+AGG | - | chr5_4:28765128-28765147 | Msa0847210:intron | 20.0% |
| !! | TATTATTTATTAAGGCATGT+CGG | - | chr5_4:28765155-28765174 | Msa0847210:intron | 20.0% |
| !! | TGTTAATCATAAATAGACAA+AGG | - | chr5_4:28765182-28765201 | Msa0847210:intron | 20.0% |
| !!! | ATCAATTTTAGTATCATTTC+AGG | + | chr5_4:28765328-28765347 | None:intergenic | 20.0% |
| !!! | AAATTGGTTTTGAAATATTG+GGG | - | chr5_4:28765365-28765384 | Msa0847210:intron | 20.0% |
| !!! | TTTTCTTTCTCTTTTTTAAG+AGG | + | chr5_4:28766134-28766153 | None:intergenic | 20.0% |
| !!! | CTTCTTTTGTTATATAAATC+TGG | - | chr5_4:28766520-28766539 | Msa0847210:intron | 20.0% |
| !!! | TTTTGTTATATAAATCTGGT+AGG | - | chr5_4:28766524-28766543 | Msa0847210:intron | 20.0% |
| !!! | TTTGTTATATAAATCTGGTA+GGG | - | chr5_4:28766525-28766544 | Msa0847210:intron | 20.0% |
| !! | TATTTAAACATTGAAAAGGT+AGG | + | chr5_4:28766674-28766693 | None:intergenic | 20.0% |
| !!! | TAATTTGTTAATGATGACTT+GGG | + | chr5_4:28767137-28767156 | None:intergenic | 20.0% |
| !!! | ATAATTTGTTAATGATGACT+TGG | + | chr5_4:28767138-28767157 | None:intergenic | 20.0% |
| !! | GTCATCATTAACAAATTATT+TGG | - | chr5_4:28767139-28767158 | Msa0847210:intron | 20.0% |
| !!! | TATGTTGTTTATGTTTATTG+TGG | - | chr5_4:28767586-28767605 | Msa0847210:CDS | 20.0% |
| !! | CCTTATTACTATATACATTT+GGG | + | chr5_4:28767702-28767721 | None:intergenic | 20.0% |
| !! | ACCTTATTACTATATACATT+TGG | + | chr5_4:28767703-28767722 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGGTTATCCAAAT+AGG | - | chr5_4:28764745-28764764 | Msa0847210:three_prime_UTR | 25.0% |
| ! | TCCTAATAGCTTATCATTTA+AGG | - | chr5_4:28764768-28764787 | Msa0847210:three_prime_UTR | 25.0% |
| ! | TCCTTAAATGATAAGCTATT+AGG | + | chr5_4:28764772-28764791 | None:intergenic | 25.0% |
| !!! | GACTAATTCATTTTGTTTTC+AGG | - | chr5_4:28764790-28764809 | Msa0847210:three_prime_UTR | 25.0% |
| !!! | TGTTGAGTTGAAAATGTATT+TGG | - | chr5_4:28764865-28764884 | Msa0847210:three_prime_UTR | 25.0% |
| ! | ATTATCATTGCGTTTACATT+TGG | - | chr5_4:28765037-28765056 | Msa0847210:CDS | 25.0% |
| ! | ATTATTTATTAAGGCATGTC+GGG | - | chr5_4:28765156-28765175 | Msa0847210:intron | 25.0% |
| !!! | TAATTTTCCATCGATTATGT+CGG | + | chr5_4:28765674-28765693 | None:intergenic | 25.0% |
| ! | TAGCATGTTTAGTACTAAAT+TGG | + | chr5_4:28765721-28765740 | None:intergenic | 25.0% |
| !!! | CACAACCTTAAATTACTTTT+TGG | - | chr5_4:28765846-28765865 | Msa0847210:CDS | 25.0% |
| ! | GTCATCCAAAAAGTAATTTA+AGG | + | chr5_4:28765854-28765873 | None:intergenic | 25.0% |
| !!! | TTCTCTTTTTTAAGAGGAAA+AGG | + | chr5_4:28766128-28766147 | None:intergenic | 25.0% |
| ! | GTTAATGAGTTATGATTCAT+TGG | + | chr5_4:28766356-28766375 | None:intergenic | 25.0% |
| ! | AGATACTGAAAAATAGAAGA+AGG | + | chr5_4:28767054-28767073 | None:intergenic | 25.0% |
| !!! | TCAGTATCTTGTTTTGTTAT+CGG | - | chr5_4:28767065-28767084 | Msa0847210:intron | 25.0% |
| ! | GAAAATTGTGATTACAAAGT+TGG | + | chr5_4:28767361-28767380 | None:intergenic | 25.0% |
| !!! | TTGTTTTGTTTGGAGAATAT+AGG | - | chr5_4:28767528-28767547 | Msa0847210:CDS | 25.0% |
| ! | CCCAAATGTATATAGTAATA+AGG | - | chr5_4:28767699-28767718 | Msa0847210:exon | 25.0% |
| ! | TATTACACGAATGTTAACTT+TGG | + | chr5_4:28767805-28767824 | None:intergenic | 25.0% |
| ATAAGCTATTAGGACCTATT+TGG | + | chr5_4:28764762-28764781 | None:intergenic | 30.0% | |
| AGAAATTGAACTAATCAAGG+AGG | + | chr5_4:28764831-28764850 | None:intergenic | 30.0% | |
| CTCAGAAATTGAACTAATCA+AGG | + | chr5_4:28764834-28764853 | None:intergenic | 30.0% | |
| ! | TGATTAGTTCAATTTCTGAG+AGG | - | chr5_4:28764834-28764853 | Msa0847210:three_prime_UTR | 30.0% |
| ! | TGAGTTGAAAATGTATTTGG+TGG | - | chr5_4:28764868-28764887 | Msa0847210:three_prime_UTR | 30.0% |
| TTACTCAATCACCAATTTCT+TGG | - | chr5_4:28765009-28765028 | Msa0847210:CDS | 30.0% | |
| ! | GCAAGTTGAGTTAAGAAATT+TGG | + | chr5_4:28765091-28765110 | None:intergenic | 30.0% |
| TGAAGCAATTAGTAATACCT+AGG | - | chr5_4:28765393-28765412 | Msa0847210:intron | 30.0% | |
| GAAGCAATTAGTAATACCTA+GGG | - | chr5_4:28765394-28765413 | Msa0847210:intron | 30.0% | |
| ! | CTTCATAAATTGTTACTTGC+AGG | - | chr5_4:28765502-28765521 | Msa0847210:CDS | 30.0% |
| ! | ATTGTTACTTGCAGGATAAT+TGG | - | chr5_4:28765510-28765529 | Msa0847210:CDS | 30.0% |
| AATACAGCAGAATTCAATAC+TGG | + | chr5_4:28765803-28765822 | None:intergenic | 30.0% | |
| AACTTTGTTCAATTTGTCAC+AGG | - | chr5_4:28765823-28765842 | Msa0847210:CDS | 30.0% | |
| !! | TTTTTGATTGCAGTTTGTCT+AGG | - | chr5_4:28765916-28765935 | Msa0847210:intron | 30.0% |
| ATCTAATACTGACGATAATC+AGG | - | chr5_4:28765954-28765973 | Msa0847210:intron | 30.0% | |
| !! | CAAGTTGATAATCATACGAA+GGG | + | chr5_4:28766071-28766090 | None:intergenic | 30.0% |
| !! | TTTTAAGAGGAAAAGGCATA+AGG | + | chr5_4:28766121-28766140 | None:intergenic | 30.0% |
| !! | CTGTTTCTAAACAGTGTTAA+GGG | + | chr5_4:28766159-28766178 | None:intergenic | 30.0% |
| !! | TCTGTTTCTAAACAGTGTTA+AGG | + | chr5_4:28766160-28766179 | None:intergenic | 30.0% |
| CACTGTTTAGAAACAGAAAT+AGG | - | chr5_4:28766163-28766182 | Msa0847210:intron | 30.0% | |
| ACTTATAAAAGTGATTGAGC+TGG | + | chr5_4:28766282-28766301 | None:intergenic | 30.0% | |
| ! | TAAAAGAGTTCCCTCTATTT+TGG | + | chr5_4:28766312-28766331 | None:intergenic | 30.0% |
| ! | TATCAGAAACTGTTTTGCTA+GGG | - | chr5_4:28766560-28766579 | Msa0847210:CDS | 30.0% |
| ! | TCTTTGAAAGAAGGAAACAT+AGG | - | chr5_4:28766585-28766604 | Msa0847210:CDS | 30.0% |
| AACTTAAAGGATTGCTTCAT+TGG | - | chr5_4:28766629-28766648 | Msa0847210:CDS | 30.0% | |
| ATTCTCTATGAGAAAAACTG+CGG | + | chr5_4:28766758-28766777 | None:intergenic | 30.0% | |
| AGTGGCACAGTTTAAAAAAA+GGG | - | chr5_4:28767003-28767022 | Msa0847210:CDS | 30.0% | |
| TACTGAAAAATAGAAGAAGG+CGG | + | chr5_4:28767051-28767070 | None:intergenic | 30.0% | |
| TAACAAATTATTTGGGAGAC+TGG | - | chr5_4:28767147-28767166 | Msa0847210:intron | 30.0% | |
| GACGAGTTCTCATTAAATAT+CGG | + | chr5_4:28767325-28767344 | None:intergenic | 30.0% | |
| ! | GATTACAAAGTTGGCTTATA+TGG | + | chr5_4:28767352-28767371 | None:intergenic | 30.0% |
| ! | TTTGAATGTGTTGATGAAAC+AGG | - | chr5_4:28767475-28767494 | Msa0847210:CDS | 30.0% |
| !! | TTTTGGGGAATTGTTTTGTT+TGG | - | chr5_4:28767518-28767537 | Msa0847210:CDS | 30.0% |
| AGGAAGAACATATATCTTAC+TGG | - | chr5_4:28767559-28767578 | Msa0847210:CDS | 30.0% | |
| GGAAGAACATATATCTTACT+GGG | - | chr5_4:28767560-28767579 | Msa0847210:CDS | 30.0% | |
| GAAGAACATATATCTTACTG+GGG | - | chr5_4:28767561-28767580 | Msa0847210:CDS | 30.0% | |
| TTTATGTTTATTGTGGCTGT+TGG | - | chr5_4:28767593-28767612 | Msa0847210:CDS | 30.0% | |
| !!! | TGTTGGCTCTTTTCTTCTTA+GGG | - | chr5_4:28764921-28764940 | Msa0847210:exon | 35.0% |
| !! | CTGTATTGACTCTGTTAGAA+AGG | - | chr5_4:28764954-28764973 | Msa0847210:CDS | 35.0% |
| ! | AATTGGTGATTGAGTAATCG+AGG | + | chr5_4:28765006-28765025 | None:intergenic | 35.0% |
| GATAATAGCAGCCAAGAAAT+TGG | + | chr5_4:28765023-28765042 | None:intergenic | 35.0% | |
| ACATTTGGTCAGATAGGAAA+TGG | - | chr5_4:28765052-28765071 | Msa0847210:CDS | 35.0% | |
| CATTTGGTCAGATAGGAAAT+GGG | - | chr5_4:28765053-28765072 | Msa0847210:CDS | 35.0% | |
| ! | TTTCTTAACTCAACTTGCTC+AGG | - | chr5_4:28765093-28765112 | Msa0847210:intron | 35.0% |
| AAACTATCATTCTACCAGTG+AGG | + | chr5_4:28765208-28765227 | None:intergenic | 35.0% | |
| GGTTCAAATCCTTCAAAACA+CGG | - | chr5_4:28765299-28765318 | Msa0847210:intron | 35.0% | |
| CAATTAGTAATACCTAGGGA+AGG | - | chr5_4:28765398-28765417 | Msa0847210:intron | 35.0% | |
| AAAATACTCAAACCTTCCCT+AGG | + | chr5_4:28765413-28765432 | None:intergenic | 35.0% | |
| AGTATGCATTTGCTCTAGTT+GGG | - | chr5_4:28765594-28765613 | Msa0847210:CDS | 35.0% | |
| !! | TATGCTTGCTGTAATCACTT+CGG | + | chr5_4:28765630-28765649 | None:intergenic | 35.0% |
| GCAAGCATAACTGTTGTTAT+AGG | - | chr5_4:28765641-28765660 | Msa0847210:CDS | 35.0% | |
| CAATACTGGATCAAGTTCAA+GGG | + | chr5_4:28765789-28765808 | None:intergenic | 35.0% | |
| TCAATACTGGATCAAGTTCA+AGG | + | chr5_4:28765790-28765809 | None:intergenic | 35.0% | |
| GTAAGCACACAATACATACA+AGG | + | chr5_4:28766019-28766038 | None:intergenic | 35.0% | |
| !! | GCAAGTTGATAATCATACGA+AGG | + | chr5_4:28766072-28766091 | None:intergenic | 35.0% |
| ! | AGAAATAGGAATTGCCACTT+TGG | - | chr5_4:28766177-28766196 | Msa0847210:intron | 35.0% |
| !! | GAAATAGGAATTGCCACTTT+GGG | - | chr5_4:28766178-28766197 | Msa0847210:intron | 35.0% |
| AAGTAGTACCTCCAAAATAG+AGG | - | chr5_4:28766298-28766317 | Msa0847210:intron | 35.0% | |
| AGTAGTACCTCCAAAATAGA+GGG | - | chr5_4:28766299-28766318 | Msa0847210:intron | 35.0% | |
| GATTCATTGGAGAAGAGAAA+AGG | + | chr5_4:28766343-28766362 | None:intergenic | 35.0% | |
| GATTGTTACTGCTGATAAAG+AGG | - | chr5_4:28766380-28766399 | Msa0847210:intron | 35.0% | |
| ! | CTATCAGAAACTGTTTTGCT+AGG | - | chr5_4:28766559-28766578 | Msa0847210:intron | 35.0% |
| !! | TTTAAGTTGAACCTTGTTGG+AGG | + | chr5_4:28766617-28766636 | None:intergenic | 35.0% |
| TCCAACAAGGTTCAACTTAA+AGG | - | chr5_4:28766616-28766635 | Msa0847210:CDS | 35.0% | |
| !! | TCCTTTAAGTTGAACCTTGT+TGG | + | chr5_4:28766620-28766639 | None:intergenic | 35.0% |
| AAATCGAAGGATCTTGAAAG+TGG | - | chr5_4:28766700-28766719 | Msa0847210:CDS | 35.0% | |
| TGAGAACAGAAGAGCTATTA+AGG | - | chr5_4:28766777-28766796 | Msa0847210:intron | 35.0% | |
| TCATACATGTAGTGTGCTAT+TGG | - | chr5_4:28766817-28766836 | Msa0847210:intron | 35.0% | |
| TTTGGGAAAAGACCTTTGAT+TGG | - | chr5_4:28766906-28766925 | Msa0847210:intron | 35.0% | |
| TTGGGAAAAGACCTTTGATT+GGG | - | chr5_4:28766907-28766926 | Msa0847210:intron | 35.0% | |
| ACTATGGTTAACCCAATCAA+AGG | + | chr5_4:28766921-28766940 | None:intergenic | 35.0% | |
| ! | TTAACCATAGTTTTCTTCGC+TGG | - | chr5_4:28766930-28766949 | Msa0847210:CDS | 35.0% |
| ! | TTTGTTGCTAAGTTGAATGC+TGG | + | chr5_4:28766978-28766997 | None:intergenic | 35.0% |
| !!! | CTTTTTTTAAACTGTGCCAC+TGG | + | chr5_4:28767004-28767023 | None:intergenic | 35.0% |
| CAGTGGCACAGTTTAAAAAA+AGG | - | chr5_4:28767002-28767021 | Msa0847210:CDS | 35.0% | |
| GTGGCACAGTTTAAAAAAAG+GGG | - | chr5_4:28767004-28767023 | Msa0847210:CDS | 35.0% | |
| AATTATTTGGGAGACTGGAA+TGG | - | chr5_4:28767152-28767171 | Msa0847210:intron | 35.0% | |
| TAGTGTCAAACGAAGTCAAA+CGG | - | chr5_4:28767382-28767401 | Msa0847210:intron | 35.0% | |
| GGAGAATATAGGAAATCATC+AGG | - | chr5_4:28767539-28767558 | Msa0847210:CDS | 35.0% | |
| TGGGAGTTCAAACTAATCAT+TGG | + | chr5_4:28767683-28767702 | None:intergenic | 35.0% | |
| ! | AATGTATTTGGTGGAGAGCA+AGG | - | chr5_4:28764877-28764896 | Msa0847210:three_prime_UTR | 40.0% |
| ! | ATGTATTTGGTGGAGAGCAA+GGG | - | chr5_4:28764878-28764897 | Msa0847210:three_prime_UTR | 40.0% |
| !!! | CTGTTGGCTCTTTTCTTCTT+AGG | - | chr5_4:28764920-28764939 | Msa0847210:exon | 40.0% |
| ! | CTCTTTTCTTCTTAGGGACA+TGG | - | chr5_4:28764927-28764946 | Msa0847210:CDS | 40.0% |
| TCTAACAGAGTCAATACAGC+AGG | + | chr5_4:28764953-28764972 | None:intergenic | 40.0% | |
| GCGTTTACATTTGGTCAGAT+AGG | - | chr5_4:28765046-28765065 | Msa0847210:CDS | 40.0% | |
| ! | TAACTCAACTTGCTCAGGTT+CGG | - | chr5_4:28765098-28765117 | Msa0847210:intron | 40.0% |
| TAAATAGACAAAGGCCTCAC+TGG | - | chr5_4:28765191-28765210 | Msa0847210:intron | 40.0% | |
| CGCAGACACTGAGAATAAAT+TGG | - | chr5_4:28765349-28765368 | Msa0847210:intron | 40.0% | |
| GCCATTGCAAACATTACTGA+GGG | + | chr5_4:28765536-28765555 | None:intergenic | 40.0% | |
| TGCCATTGCAAACATTACTG+AGG | + | chr5_4:28765537-28765556 | None:intergenic | 40.0% | |
| TCAGTAATGTTTGCAATGGC+AGG | - | chr5_4:28765536-28765555 | Msa0847210:CDS | 40.0% | |
| TAGAGCAAATGCATACTGTG+TGG | + | chr5_4:28765591-28765610 | None:intergenic | 40.0% | |
| CAGTATGCATTTGCTCTAGT+TGG | - | chr5_4:28765593-28765612 | Msa0847210:CDS | 40.0% | |
| TATCTCACCGACATAATCGA+TGG | - | chr5_4:28765664-28765683 | Msa0847210:intron | 40.0% | |
| ! | AAAGCTGAGATTCTTTTCCC+TGG | - | chr5_4:28765883-28765902 | Msa0847210:intron | 40.0% |
| TCAAAAAGCAACCAACTCCA+GGG | + | chr5_4:28765903-28765922 | None:intergenic | 40.0% | |
| ATCAAAAAGCAACCAACTCC+AGG | + | chr5_4:28765904-28765923 | None:intergenic | 40.0% | |
| TGATAATCATACGAAGGGAC+CGG | + | chr5_4:28766066-28766085 | None:intergenic | 40.0% | |
| AGCTATGATAGTTCCCAAAG+TGG | + | chr5_4:28766194-28766213 | None:intergenic | 40.0% | |
| !! | AAGAGTTCCCTCTATTTTGG+AGG | + | chr5_4:28766309-28766328 | None:intergenic | 40.0% |
| TGGAGAAGAGAAAAGGAGTT+TGG | + | chr5_4:28766336-28766355 | None:intergenic | 40.0% | |
| TGAATTTCAGTTGCTGAGTG+CGG | - | chr5_4:28766428-28766447 | Msa0847210:intron | 40.0% | |
| GAGTGCGGAATTTGTGTTTA+TGG | - | chr5_4:28766443-28766462 | Msa0847210:intron | 40.0% | |
| ATAGGTAAGAACCTCCAACA+AGG | - | chr5_4:28766603-28766622 | Msa0847210:CDS | 40.0% | |
| TGAAAGTGGAAGCAATTCTG+CGG | - | chr5_4:28766714-28766733 | Msa0847210:CDS | 40.0% | |
| TCTGCGGAAAAATTGAAAGC+AGG | - | chr5_4:28766730-28766749 | Msa0847210:intron | 40.0% | |
| GATTCCAGCGAAGAAAACTA+TGG | + | chr5_4:28766937-28766956 | None:intergenic | 40.0% | |
| ACTTAGCAACAAATGACCAG+TGG | - | chr5_4:28766985-28767004 | Msa0847210:CDS | 40.0% | |
| GCGGTGTAAACATTCAAATG+GGG | + | chr5_4:28767032-28767051 | None:intergenic | 40.0% | |
| GGCGGTGTAAACATTCAAAT+GGG | + | chr5_4:28767033-28767052 | None:intergenic | 40.0% | |
| AGGCGGTGTAAACATTCAAA+TGG | + | chr5_4:28767034-28767053 | None:intergenic | 40.0% | |
| ACTTGGGTAAGTTCAAGACA+GGG | + | chr5_4:28767121-28767140 | None:intergenic | 40.0% | |
| CTGGTTTCCTTTGTGGATTT+GGG | - | chr5_4:28767195-28767214 | Msa0847210:intron | 40.0% | |
| TTCCTTTGTGGATTTGGGAA+TGG | - | chr5_4:28767200-28767219 | Msa0847210:intron | 40.0% | |
| GCAATCTTGTTAAACTCACC+TGG | + | chr5_4:28767277-28767296 | None:intergenic | 40.0% | |
| TTGACTCTGTTAGAAAGGCG+AGG | - | chr5_4:28764959-28764978 | Msa0847210:CDS | 45.0% | |
| TAATCGAGGTAGGTATGCTG+AGG | + | chr5_4:28764992-28765011 | None:intergenic | 45.0% | |
| GGTGATTGAGTAATCGAGGT+AGG | + | chr5_4:28765002-28765021 | None:intergenic | 45.0% | |
| !! | TTCAGGTGTCCGTGTTTTGA+AGG | + | chr5_4:28765311-28765330 | None:intergenic | 45.0% |
| GCCCTCAGTAATGTTTGCAA+TGG | - | chr5_4:28765532-28765551 | Msa0847210:CDS | 45.0% | |
| GTAATGTTTGCAATGGCAGG+TGG | - | chr5_4:28765539-28765558 | Msa0847210:CDS | 45.0% | |
| ATTTGCTCTAGTTGGGCTGT+CGG | - | chr5_4:28765601-28765620 | Msa0847210:CDS | 45.0% | |
| ! | GAGATTCTTTTCCCTGGAGT+TGG | - | chr5_4:28765889-28765908 | Msa0847210:intron | 45.0% |
| CGATAATCAGGCTAAGCTCA+AGG | - | chr5_4:28765966-28765985 | Msa0847210:intron | 45.0% | |
| GTCTATTTAACTCCCCTTGC+CGG | - | chr5_4:28766044-28766063 | Msa0847210:intron | 45.0% | |
| ! | GCTAGGGACTCTTTGAAAGA+AGG | - | chr5_4:28766576-28766595 | Msa0847210:CDS | 45.0% |
| ! | CTTTTCCCAAAAACCTGCAG+CGG | + | chr5_4:28766897-28766916 | None:intergenic | 45.0% |
| AGTTCAAGACAGGGTGGTAA+AGG | + | chr5_4:28767112-28767131 | None:intergenic | 45.0% | |
| GACTTGGGTAAGTTCAAGAC+AGG | + | chr5_4:28767122-28767141 | None:intergenic | 45.0% | |
| ACAAAGGAAACCAGCCAACA+AGG | + | chr5_4:28767189-28767208 | None:intergenic | 45.0% | |
| !! | TTGTTGGCTGGTTTCCTTTG+TGG | - | chr5_4:28767188-28767207 | Msa0847210:intron | 45.0% |
| ! | GCTGGTTTCCTTTGTGGATT+TGG | - | chr5_4:28767194-28767213 | Msa0847210:intron | 45.0% |
| TGGGAATGGCCTTCAGTTTA+TGG | - | chr5_4:28767214-28767233 | Msa0847210:intron | 45.0% | |
| GGGAATGGCCTTCAGTTTAT+GGG | - | chr5_4:28767215-28767234 | Msa0847210:intron | 45.0% | |
| AATGGCCTTCAGTTTATGGG+AGG | - | chr5_4:28767218-28767237 | Msa0847210:intron | 45.0% | |
| CTTGACCTCCCATAAACTGA+AGG | + | chr5_4:28767226-28767245 | None:intergenic | 45.0% | |
| ! | TTCCACTTGTGAGCACGTTT+TGG | - | chr5_4:28767501-28767520 | Msa0847210:CDS | 45.0% |
| ! | TCCACTTGTGAGCACGTTTT+GGG | - | chr5_4:28767502-28767521 | Msa0847210:CDS | 45.0% |
| ! | TATTTGGTGGAGAGCAAGGG+AGG | - | chr5_4:28764881-28764900 | Msa0847210:three_prime_UTR | 50.0% |
| GGTAGGTATGCTGAGGAAGA+CGG | + | chr5_4:28764985-28765004 | None:intergenic | 50.0% | |
| TGGACAGATTCCCAAGGCTA+AGG | + | chr5_4:28765571-28765590 | None:intergenic | 50.0% | |
| ACTGTGTGGACAGATTCCCA+AGG | + | chr5_4:28765577-28765596 | None:intergenic | 50.0% | |
| TACTCTTAACGTTCCGCTGC+AGG | - | chr5_4:28766881-28766900 | Msa0847210:intron | 50.0% | |
| ! | AACGTTCCGCTGCAGGTTTT+TGG | - | chr5_4:28766888-28766907 | Msa0847210:intron | 50.0% |
| ! | ACGTTCCGCTGCAGGTTTTT+GGG | - | chr5_4:28766889-28766908 | Msa0847210:intron | 50.0% |
| TGGGTAAGTTCAAGACAGGG+TGG | + | chr5_4:28767118-28767137 | None:intergenic | 50.0% | |
| TTGGGAGACTGGAATGGAAG+AGG | - | chr5_4:28767158-28767177 | Msa0847210:intron | 50.0% | |
| AGACTGGAATGGAAGAGGCT+GGG | - | chr5_4:28767163-28767182 | Msa0847210:intron | 50.0% | |
| GGCCATTCCCAAATCCACAA+AGG | + | chr5_4:28767205-28767224 | None:intergenic | 50.0% | |
| TTTATGGGAGGTCAAGCTGC+TGG | - | chr5_4:28767230-28767249 | Msa0847210:intron | 50.0% | |
| ! | CCACTTGTGAGCACGTTTTG+GGG | - | chr5_4:28767503-28767522 | Msa0847210:CDS | 50.0% |
| GTGTGCTCATGGCATCATCA+GGG | - | chr5_4:28767615-28767634 | Msa0847210:CDS | 50.0% | |
| !! | AGAGCAAGGGAGGTGCCATA+GGG | - | chr5_4:28764891-28764910 | Msa0847210:three_prime_UTR | 55.0% |
| TGCCATAGGGTGCATGCTGT+TGG | - | chr5_4:28764904-28764923 | Msa0847210:three_prime_UTR | 55.0% | |
| AGCCAACAGCATGCACCCTA+TGG | + | chr5_4:28764909-28764928 | None:intergenic | 55.0% | |
| GTTTGCAATGGCAGGTGGTG+TGG | - | chr5_4:28765544-28765563 | Msa0847210:CDS | 55.0% | |
| ! | GTGGTGTGGTCCTTAGCCTT+GGG | - | chr5_4:28765558-28765577 | Msa0847210:CDS | 55.0% |
| TCATACGAAGGGACCGGCAA+GGG | + | chr5_4:28766060-28766079 | None:intergenic | 55.0% | |
| ATCATACGAAGGGACCGGCA+AGG | + | chr5_4:28766061-28766080 | None:intergenic | 55.0% | |
| GAGACTGGAATGGAAGAGGC+TGG | - | chr5_4:28767162-28767181 | Msa0847210:intron | 55.0% | |
| CCCCAAAACGTGCTCACAAG+TGG | + | chr5_4:28767506-28767525 | None:intergenic | 55.0% | |
| TGTGGCTGTTGGTGTGCTCA+TGG | - | chr5_4:28767604-28767623 | Msa0847210:CDS | 55.0% | |
| GGTGTGCTCATGGCATCATC+AGG | - | chr5_4:28767614-28767633 | Msa0847210:CDS | 55.0% | |
| TCATGGCATCATCAGGGCAC+AGG | - | chr5_4:28767621-28767640 | Msa0847210:CDS | 55.0% | |
| !! | GAGAGCAAGGGAGGTGCCAT+AGG | - | chr5_4:28764890-28764909 | Msa0847210:three_prime_UTR | 60.0% |
| GGTGGTGTGGTCCTTAGCCT+TGG | - | chr5_4:28765557-28765576 | Msa0847210:CDS | 60.0% | |
| CATACGAAGGGACCGGCAAG+GGG | + | chr5_4:28766059-28766078 | None:intergenic | 60.0% | |
| ! | TGGAAGAGGCTGGGCCTTGT+TGG | - | chr5_4:28767172-28767191 | Msa0847210:intron | 60.0% |
| TGCAGCAGCTGATGCTGTCC+AGG | - | chr5_4:28767256-28767275 | Msa0847210:intron | 60.0% | |
| !! | AGAGGCTGGGCCTTGTTGGC+TGG | - | chr5_4:28767176-28767195 | Msa0847210:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 28764740 | 28767839 | 28764740 | ID=Msa0847210;Name=Msa0847210 |
| chr5_4 | mRNA | 28764740 | 28767839 | 28764740 | ID=Msa0847210-mRNA-1;Parent=Msa0847210;Name=Msa0847210-mRNA-1;_AED=0.14;_eAED=0.14;_QI=138|0.83|0.85|1|0.83|0.85|7|187|350 |
| chr5_4 | exon | 28764740 | 28765082 | 28764740 | ID=Msa0847210-mRNA-1:exon:10801;Parent=Msa0847210-mRNA-1 |
| chr5_4 | exon | 28765458 | 28765676 | 28765458 | ID=Msa0847210-mRNA-1:exon:10800;Parent=Msa0847210-mRNA-1 |
| chr5_4 | exon | 28765781 | 28765881 | 28765781 | ID=Msa0847210-mRNA-1:exon:10799;Parent=Msa0847210-mRNA-1 |
| chr5_4 | exon | 28765973 | 28765998 | 28765973 | ID=Msa0847210-mRNA-1:exon:10798;Parent=Msa0847210-mRNA-1 |
| chr5_4 | exon | 28766560 | 28766734 | 28766560 | ID=Msa0847210-mRNA-1:exon:10797;Parent=Msa0847210-mRNA-1 |
| chr5_4 | exon | 28766917 | 28767055 | 28766917 | ID=Msa0847210-mRNA-1:exon:10796;Parent=Msa0847210-mRNA-1 |
| chr5_4 | exon | 28767465 | 28767839 | 28767465 | ID=Msa0847210-mRNA-1:exon:10795;Parent=Msa0847210-mRNA-1 |
| chr5_4 | five_prime_UTR | 28767702 | 28767839 | 28767702 | ID=Msa0847210-mRNA-1:five_prime_utr;Parent=Msa0847210-mRNA-1 |
| chr5_4 | CDS | 28767465 | 28767701 | 28767465 | ID=Msa0847210-mRNA-1:cds;Parent=Msa0847210-mRNA-1 |
| chr5_4 | CDS | 28766917 | 28767055 | 28766917 | ID=Msa0847210-mRNA-1:cds;Parent=Msa0847210-mRNA-1 |
| chr5_4 | CDS | 28766560 | 28766734 | 28766560 | ID=Msa0847210-mRNA-1:cds;Parent=Msa0847210-mRNA-1 |
| chr5_4 | CDS | 28765973 | 28765998 | 28765973 | ID=Msa0847210-mRNA-1:cds;Parent=Msa0847210-mRNA-1 |
| chr5_4 | CDS | 28765781 | 28765881 | 28765781 | ID=Msa0847210-mRNA-1:cds;Parent=Msa0847210-mRNA-1 |
| chr5_4 | CDS | 28765458 | 28765676 | 28765458 | ID=Msa0847210-mRNA-1:cds;Parent=Msa0847210-mRNA-1 |
| chr5_4 | CDS | 28764927 | 28765082 | 28764927 | ID=Msa0847210-mRNA-1:cds;Parent=Msa0847210-mRNA-1 |
| chr5_4 | three_prime_UTR | 28764740 | 28764926 | 28764740 | ID=Msa0847210-mRNA-1:three_prime_utr;Parent=Msa0847210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
