Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801780 | sp|F4KD71|DUR3_ARATH | 78.684 | 699 | 143 | 2 | 5 | 698 | 2 | 699 | 0.0 | 1119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801780 | G7K6S1 | 99.004 | 703 | 7 | 0 | 1 | 703 | 1 | 703 | 0.0 | 1400 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0038720 | Msa0801780 | 0.842132 | 3.116436e-58 | -8.615850e-47 |
| Msa0046380 | Msa0801780 | 0.801235 | 9.909993e-49 | -8.615850e-47 |
| Msa0085280 | Msa0801780 | 0.830430 | 2.949603e-55 | -8.615850e-47 |
| Msa0085290 | Msa0801780 | 0.816170 | 6.348379e-52 | -8.615850e-47 |
| Msa0086590 | Msa0801780 | 0.839461 | 1.562445e-57 | -8.615850e-47 |
| Msa0099210 | Msa0801780 | 0.811161 | 8.042068e-51 | -8.615850e-47 |
| Msa0607540 | Msa0801780 | 0.807310 | 5.381785e-50 | -8.615850e-47 |
| Msa0615010 | Msa0801780 | 0.815165 | 1.063075e-51 | -8.615850e-47 |
| Msa0622170 | Msa0801780 | -0.802898 | 4.508732e-49 | -8.615850e-47 |
| Msa0625190 | Msa0801780 | 0.801243 | 9.873053e-49 | -8.615850e-47 |
| Msa0648860 | Msa0801780 | 0.822745 | 2.010057e-53 | -8.615850e-47 |
| Msa0664970 | Msa0801780 | 0.801931 | 7.134598e-49 | -8.615850e-47 |
| Msa0706020 | Msa0801780 | 0.812380 | 4.365822e-51 | -8.615850e-47 |
| Msa0735170 | Msa0801780 | 0.804993 | 1.654386e-49 | -8.615850e-47 |
| Msa0756320 | Msa0801780 | 0.838924 | 2.154136e-57 | -8.615850e-47 |
| Msa0760440 | Msa0801780 | 0.880748 | 4.252194e-70 | -8.615850e-47 |
| Msa0796690 | Msa0801780 | 0.825421 | 4.731866e-54 | -8.615850e-47 |
| Msa0801780 | Msa0805310 | 0.812635 | 3.839006e-51 | -8.615850e-47 |
| Msa0801780 | Msa0840330 | 0.850814 | 1.331544e-60 | -8.615850e-47 |
| Msa0801780 | Msa0842650 | 0.831394 | 1.711362e-55 | -8.615850e-47 |
| Msa0801780 | Msa0847210 | 0.800273 | 1.557225e-48 | -8.615850e-47 |
| Msa0801780 | Msa0870060 | 0.810053 | 1.395414e-50 | -8.615850e-47 |
| Msa0801780 | Msa0925290 | 0.802650 | 5.073251e-49 | -8.615850e-47 |
| Msa0801780 | Msa0925870 | 0.810787 | 9.686891e-51 | -8.615850e-47 |
| Msa0801780 | Msa0927380 | 0.812937 | 3.297291e-51 | -8.615850e-47 |
| Msa0801780 | Msa0935910 | 0.807261 | 5.511326e-50 | -8.615850e-47 |
| Msa0801780 | Msa0939110 | 0.816936 | 4.276208e-52 | -8.615850e-47 |
| Msa0801780 | Msa0943190 | 0.806336 | 8.645379e-50 | -8.615850e-47 |
| Msa0801780 | Msa0953120 | 0.807537 | 4.815825e-50 | -8.615850e-47 |
| Msa0801780 | Msa0973600 | 0.810958 | 8.896426e-51 | -8.615850e-47 |
| Msa0801780 | Msa1030970 | 0.803062 | 4.170272e-49 | -8.615850e-47 |
| Msa0801780 | Msa1039710 | -0.802675 | 5.012894e-49 | -8.615850e-47 |
| Msa0801780 | Msa1075650 | 0.804558 | 2.038943e-49 | -8.615850e-47 |
| Msa0801780 | Msa1085740 | 0.800468 | 1.421046e-48 | -8.615850e-47 |
| Msa0801780 | Msa1121490 | 0.808646 | 2.796017e-50 | -8.615850e-47 |
| Msa0801780 | Msa1201200 | 0.827719 | 1.339745e-54 | -8.615850e-47 |
| Msa0801780 | Msa1238330 | 0.800615 | 1.326171e-48 | -8.615850e-47 |
| Msa0801780 | Msa1241130 | -0.806008 | 1.013223e-49 | -8.615850e-47 |
| Msa0801780 | Msa1249490 | 0.808397 | 3.159699e-50 | -8.615850e-47 |
| Msa0801780 | Msa1269940 | 0.808827 | 2.557662e-50 | -8.615850e-47 |
| Msa0801780 | Msa1304890 | -0.810140 | 1.336582e-50 | -8.615850e-47 |
| Msa0801780 | Msa1310210 | 0.801946 | 7.083758e-49 | -8.615850e-47 |
| Msa0801780 | Msa1378040 | 0.818351 | 2.050867e-52 | -8.615850e-47 |
| Msa0801780 | Msa1393410 | 0.800410 | 1.460146e-48 | -8.615850e-47 |
| Msa0801780 | Msa1408340 | 0.811841 | 5.722918e-51 | -8.615850e-47 |
| Msa0801780 | Msa1419960 | 0.808825 | 2.559966e-50 | -8.615850e-47 |
| Msa0801780 | Msa1435420 | 0.804298 | 2.309773e-49 | -8.615850e-47 |
| Msa0801780 | Msa1450760 | 0.800458 | 1.427650e-48 | -8.615850e-47 |
| Msa0801780 | Msa1458510 | 0.802288 | 6.022728e-49 | -8.615850e-47 |
| Msa0801780 | Msa1460800 | 0.823845 | 1.112226e-53 | -8.615850e-47 |
| Msa0200850 | Msa0801780 | 0.844947 | 5.511784e-59 | -8.615850e-47 |
| Msa0223010 | Msa0801780 | 0.803318 | 3.692206e-49 | -8.615850e-47 |
| Msa0371950 | Msa0801780 | 0.809423 | 1.906086e-50 | -8.615850e-47 |
| Msa0387690 | Msa0801780 | 0.805790 | 1.125942e-49 | -8.615850e-47 |
| Msa0399130 | Msa0801780 | 0.806867 | 6.677026e-50 | -8.615850e-47 |
| Msa0455760 | Msa0801780 | 0.826620 | 2.454408e-54 | -8.615850e-47 |
| Msa0458720 | Msa0801780 | 0.800085 | 1.700362e-48 | -8.615850e-47 |
| Msa0476330 | Msa0801780 | 0.803888 | 2.812196e-49 | -8.615850e-47 |
| Msa0479340 | Msa0801780 | 0.822653 | 2.111837e-53 | -8.615850e-47 |
| Msa0243480 | Msa0801780 | 0.823406 | 1.409461e-53 | -8.615850e-47 |
| Msa0244190 | Msa0801780 | 0.812457 | 4.199096e-51 | -8.615850e-47 |
| Msa0269810 | Msa0801780 | 0.809935 | 1.479749e-50 | -8.615850e-47 |
| Msa0271550 | Msa0801780 | 0.800935 | 1.140896e-48 | -8.615850e-47 |
| Msa0281930 | Msa0801780 | 0.821399 | 4.122745e-53 | -8.615850e-47 |
| Msa0305190 | Msa0801780 | 0.808170 | 3.533006e-50 | -8.615850e-47 |
| Msa0307540 | Msa0801780 | 0.807245 | 5.554593e-50 | -8.615850e-47 |
| Msa0319290 | Msa0801780 | 0.802787 | 4.752792e-49 | -8.615850e-47 |
| Msa0321080 | Msa0801780 | 0.847535 | 1.087727e-59 | -8.615850e-47 |
| Msa0339620 | Msa0801780 | 0.816942 | 4.262524e-52 | -8.615850e-47 |
| Msa0340450 | Msa0801780 | 0.804394 | 2.206316e-49 | -8.615850e-47 |
| Msa0491220 | Msa0801780 | 0.806405 | 8.360153e-50 | -8.615850e-47 |
| Msa0526070 | Msa0801780 | -0.810973 | 8.832841e-51 | -8.615850e-47 |
| Msa0561910 | Msa0801780 | 0.822015 | 2.970137e-53 | -8.615850e-47 |
| Msa0594560 | Msa0801780 | 0.822474 | 2.323203e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801780 | MtrunA17_Chr5g0409141 | 99.004 | 703 | 7 | 0 | 1 | 703 | 1 | 703 | 0.0 | 1400 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0801780 | AT5G45380.1 | 78.684 | 699 | 143 | 2 | 5 | 698 | 2 | 699 | 0.0 | 1119 |
Find 177 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGATCAGGTAATGTTATT+TGG | 0.141051 | 5_3:-15931571 | Msa0801780:intron |
| GGTAATGTTATTTGGAATTA+TGG | 0.160209 | 5_3:-15931563 | Msa0801780:CDS |
| TGCTCTCTTCACCTCTTTCT+TGG | 0.162268 | 5_3:-15932406 | Msa0801780:intron |
| GCAATTCTTGGAACGGTATT+TGG | 0.166478 | 5_3:-15929022 | Msa0801780:CDS |
| ATGGGGTTAGTGGACCTTTC+TGG | 0.201082 | 5_3:-15931728 | Msa0801780:CDS |
| TATTCTATCATTCTTGGTTT+TGG | 0.208101 | 5_3:-15932438 | Msa0801780:CDS |
| TCTAATGTTGCTTGGGAGTA+TGG | 0.215531 | 5_3:-15931747 | Msa0801780:CDS |
| CTATTGCTTTCATGCTTCTA+TGG | 0.236645 | 5_3:-15929066 | Msa0801780:CDS |
| AACTCATAAGGGATACTTAT+TGG | 0.241251 | 5_3:-15930184 | Msa0801780:CDS |
| CCTAGGGTTTGGATGTTTCA+TGG | 0.275442 | 5_3:-15929179 | Msa0801780:CDS |
| AGCAAATACTATCATCAAAA+TGG | 0.278871 | 5_3:-15932525 | Msa0801780:CDS |
| TTTCATTTAGTGGTAAATCT+AGG | 0.283445 | 5_3:+15930097 | None:intergenic |
| GTATCCCAGCTCTCTATTAT+TGG | 0.295258 | 5_3:+15927836 | None:intergenic |
| GTTGGATATTCTATCATTCT+TGG | 0.298617 | 5_3:-15932444 | Msa0801780:CDS |
| TTTGGCCACATCACTTGGTT+TGG | 0.301265 | 5_3:-15930130 | Msa0801780:CDS |
| GTAACGGCTATGTTACTTCT+TGG | 0.302150 | 5_3:-15931171 | Msa0801780:CDS |
| AAGCAACATTAGAGCTTTGC+AGG | 0.303924 | 5_3:+15931757 | None:intergenic |
| AACCTTGTTTCTATACTAAC+TGG | 0.308038 | 5_3:-15928899 | Msa0801780:CDS |
| CTTCCTATGTAAGATTTATA+AGG | 0.317761 | 5_3:-15927653 | Msa0801780:exon |
| TTCTGGGCTGTGATTGCTAT+AGG | 0.320090 | 5_3:-15927896 | Msa0801780:CDS |
| AATGCAATTGGAGCAATTCT+TGG | 0.320555 | 5_3:-15929034 | Msa0801780:CDS |
| TTGGCCACATCACTTGGTTT+GGG | 0.323563 | 5_3:-15930129 | Msa0801780:CDS |
| CCTGCCTCACTTTCATTTAG+TGG | 0.323612 | 5_3:+15930087 | None:intergenic |
| TAAAGTTTGGATTGTGAAAT+GGG | 0.326899 | 5_3:-15928738 | Msa0801780:CDS |
| AGTTAACAAGGGCTAAAGTT+TGG | 0.327333 | 5_3:-15928751 | Msa0801780:CDS |
| TGTTTGTTCTGCAGTGGACT+TGG | 0.336559 | 5_3:-15931791 | Msa0801780:intron |
| GCCGTTGTAAATGCATTAAC+TGG | 0.338562 | 5_3:-15931141 | Msa0801780:CDS |
| CCTTTGTGATTTCCACTAAC+AGG | 0.343389 | 5_3:+15930604 | None:intergenic |
| ATTAACATTGTTGGCAACTT+TGG | 0.345118 | 5_3:-15930535 | Msa0801780:CDS |
| AGTGATGTGGCCAAAGAAAA+TGG | 0.348681 | 5_3:+15930138 | None:intergenic |
| TGTGAAATGTTTAGGGCTAT+TGG | 0.351555 | 5_3:-15930236 | Msa0801780:intron |
| GCTTGGGAGTATGGGGTTAG+TGG | 0.361154 | 5_3:-15931738 | Msa0801780:CDS |
| ACCATCCAAACTGTTATTCT+AGG | 0.368778 | 5_3:-15927815 | Msa0801780:CDS |
| AGCTACTGCTGTAGCTTTGA+TGG | 0.369670 | 5_3:-15930046 | Msa0801780:CDS |
| ACTTATTGGGAGGTCTGGTC+TGG | 0.382990 | 5_3:-15930170 | Msa0801780:CDS |
| CTAAAGTTTGGATTGTGAAA+TGG | 0.386988 | 5_3:-15928739 | Msa0801780:CDS |
| CATAGAAGCATGAAAGCAAT+AGG | 0.390735 | 5_3:+15929067 | None:intergenic |
| TTTGGGATTATTAACATTGT+TGG | 0.391861 | 5_3:-15930544 | Msa0801780:CDS |
| CTAATGTTGCTTGGGAGTAT+GGG | 0.392641 | 5_3:-15931746 | Msa0801780:CDS |
| GATTGCCCATGGTGTGATAT+AGG | 0.394405 | 5_3:+15930634 | None:intergenic |
| AGAGGTGTTGTCCTAGGGTT+TGG | 0.396258 | 5_3:-15929190 | Msa0801780:CDS |
| AAGTAAAGTCTCTCTGCTTC+TGG | 0.397454 | 5_3:+15927716 | None:intergenic |
| TACTTAACAATGCTTAGTTC+AGG | 0.400129 | 5_3:-15930577 | Msa0801780:CDS |
| GTGAAATGTTTAGGGCTATT+GGG | 0.407301 | 5_3:-15930235 | Msa0801780:intron |
| GAGACTTTACTTGCTTGAAA+AGG | 0.407413 | 5_3:-15927705 | Msa0801780:CDS |
| ACAAATTACTGTGGTTGAAA+AGG | 0.407890 | 5_3:-15928813 | Msa0801780:CDS |
| GGCTGTGATTGCTATAGGAT+GGG | 0.409974 | 5_3:-15927891 | Msa0801780:CDS |
| AACAAAGCAGGAGTATCTTT+AGG | 0.410869 | 5_3:-15929136 | Msa0801780:CDS |
| ACTCATAAGGGATACTTATT+GGG | 0.412256 | 5_3:-15930183 | Msa0801780:CDS |
| GCTATAGGATGGGGTACAAT+AGG | 0.414755 | 5_3:-15927881 | Msa0801780:CDS |
| CATTTCTTCCACTTGTATCA+AGG | 0.418374 | 5_3:+15928939 | None:intergenic |
| TTCAACCACAGTAATTTGTT+TGG | 0.425343 | 5_3:+15928817 | None:intergenic |
| CTAGGGTTTGGATGTTTCAT+GGG | 0.427027 | 5_3:-15929178 | Msa0801780:CDS |
| AAGACCTTCATCAACTCATA+AGG | 0.432550 | 5_3:-15930196 | Msa0801780:CDS |
| TGGATTGTGAAATGGGGTAT+TGG | 0.439736 | 5_3:-15928731 | Msa0801780:CDS |
| TGCAAAGCTCTAATGTTGCT+TGG | 0.441295 | 5_3:-15931755 | Msa0801780:CDS |
| TGCTAGTGTCATAGTGTCTC+AGG | 0.441520 | 5_3:-15931899 | Msa0801780:intron |
| AGACAAGCAAGTTTCTTTGA+AGG | 0.441986 | 5_3:-15932489 | Msa0801780:CDS |
| TGGAGAAAAGCAAATGCAAT+TGG | 0.444411 | 5_3:-15929046 | Msa0801780:CDS |
| CAAGTTGCATACAATCATAC+AGG | 0.449366 | 5_3:-15927744 | Msa0801780:CDS |
| ATCAGGGCAGTGACTTCTGC+TGG | 0.450029 | 5_3:-15929313 | Msa0801780:intron |
| AGAAATGCACCAATGCTTGC+TGG | 0.451705 | 5_3:-15928923 | Msa0801780:CDS |
| GTATCAAGAGGTGTTGTCCT+AGG | 0.454277 | 5_3:-15929196 | Msa0801780:CDS |
| GACCTTTCTGGTATGCTAGT+GGG | 0.454420 | 5_3:-15931716 | Msa0801780:CDS |
| GCAAAGCTCTAATGTTGCTT+GGG | 0.455203 | 5_3:-15931754 | Msa0801780:CDS |
| GTTTGTTCTGCAGTGGACTT+GGG | 0.455839 | 5_3:-15931790 | Msa0801780:intron |
| GGGATACTTATTGGGAGGTC+TGG | 0.457748 | 5_3:-15930175 | Msa0801780:CDS |
| TTCATTTAGTGGTAAATCTA+GGG | 0.460128 | 5_3:+15930098 | None:intergenic |
| ACATTCCTAGAATAACAGTT+TGG | 0.462878 | 5_3:+15927810 | None:intergenic |
| TCACACACAGTATGAGCATA+TGG | 0.463157 | 5_3:+15931517 | None:intergenic |
| CCTATTCTTTCCCTCCCTGC+AGG | 0.465355 | 5_3:-15928680 | Msa0801780:intron |
| GGCTATAGAGATTAAAAGAA+AGG | 0.466560 | 5_3:-15931542 | Msa0801780:CDS |
| GGCTAGAGAAGAGGTATGTT+GGG | 0.470939 | 5_3:-15931981 | Msa0801780:CDS |
| GGGCTGTGATTGCTATAGGA+TGG | 0.471111 | 5_3:-15927892 | Msa0801780:CDS |
| TCTGTTACAAAGATAGAGTA+TGG | 0.473381 | 5_3:-15928971 | Msa0801780:CDS |
| CAATCTTGTGGTCCTGTTAG+TGG | 0.476528 | 5_3:-15930616 | Msa0801780:CDS |
| ATCAAAGCTACAGCAGTAGC+TGG | 0.478317 | 5_3:+15930048 | None:intergenic |
| CTTTACCAATAATAGAGAGC+TGG | 0.479765 | 5_3:-15927841 | Msa0801780:CDS |
| TGGCTAGAGAAGAGGTATGT+TGG | 0.480542 | 5_3:-15931982 | Msa0801780:CDS |
| TTGTCATGAAGCAGAAGAAA+AGG | 0.481576 | 5_3:+15931202 | None:intergenic |
| GGATGGATGTACCTTGCAAT+GGG | 0.485206 | 5_3:-15929115 | Msa0801780:CDS |
| AAATGACAGACTCGTGGAAA+AGG | 0.489314 | 5_3:-15927783 | Msa0801780:CDS |
| AGCTATATACACTCTGTCAT+AGG | 0.496290 | 5_3:-15931030 | Msa0801780:intron |
| GGATGTGAAAGAAGAATGTA+AGG | 0.497106 | 5_3:+15927595 | None:intergenic |
| CATGTGCTTAATCAAGGAGT+TGG | 0.499736 | 5_3:-15932462 | Msa0801780:CDS |
| GAACCATTCCGAGGTGTGGC+GGG | 0.500050 | 5_3:+15931957 | None:intergenic |
| TACTATCATCAAAATGGAGG+TGG | 0.507091 | 5_3:-15932519 | Msa0801780:CDS |
| ACGGCTATGTTACTTCTTGG+TGG | 0.507992 | 5_3:-15931168 | Msa0801780:CDS |
| GCTACTGCTGTAGCTTTGAT+GGG | 0.509276 | 5_3:-15930045 | Msa0801780:CDS |
| GCACCTTATAAATCTTACAT+AGG | 0.510298 | 5_3:+15927650 | None:intergenic |
| GGCAAACATGTGCTTAATCA+AGG | 0.513473 | 5_3:-15932468 | Msa0801780:CDS |
| CTCAGAGTTACCTGCAGGGA+GGG | 0.513856 | 5_3:+15928670 | None:intergenic |
| ATGCTGTTTGTAGCATGTTG+TGG | 0.515060 | 5_3:-15928865 | Msa0801780:CDS |
| AGACCTTCATCAACTCATAA+GGG | 0.515958 | 5_3:-15930195 | Msa0801780:CDS |
| TCTTCTTTAAACTCTTCCAC+TGG | 0.518305 | 5_3:+15928776 | None:intergenic |
| TTTACCAATAATAGAGAGCT+GGG | 0.522177 | 5_3:-15927840 | Msa0801780:CDS |
| GGACCTTTCTGGTATGCTAG+TGG | 0.531298 | 5_3:-15931717 | Msa0801780:CDS |
| ACAAGGTTTCCAGCAAGCAT+TGG | 0.532587 | 5_3:+15928914 | None:intergenic |
| TATCAAGAGGTGTTGTCCTA+GGG | 0.532603 | 5_3:-15929195 | Msa0801780:CDS |
| CATGGTGTGATATAGGATCT+TGG | 0.534266 | 5_3:+15930641 | None:intergenic |
| CCACTAAATGAAAGTGAGGC+AGG | 0.534340 | 5_3:-15930087 | Msa0801780:CDS |
| TCCTAGAATAACAGTTTGGA+TGG | 0.536458 | 5_3:+15927814 | None:intergenic |
| AGGATGGATGTACCTTGCAA+TGG | 0.537626 | 5_3:-15929116 | Msa0801780:CDS |
| AATGAAAGTGAGGCAGGTCG+TGG | 0.540964 | 5_3:-15930081 | Msa0801780:CDS |
| TCGGAATGGTTCAATACAGC+AGG | 0.542256 | 5_3:-15931946 | Msa0801780:CDS |
| TAATGTTGCTTGGGAGTATG+GGG | 0.544031 | 5_3:-15931745 | Msa0801780:CDS |
| ACCTTTCTGGTATGCTAGTG+GGG | 0.544369 | 5_3:-15931715 | Msa0801780:CDS |
| GAATGTGGCCTTGAGTCCAC+CGG | 0.545609 | 5_3:+15931059 | None:intergenic |
| ATGATTACTAACCAAGAAAG+AGG | 0.553468 | 5_3:+15932395 | None:intergenic |
| TTAACAATGCTTAGTTCAGG+TGG | 0.556883 | 5_3:-15930574 | Msa0801780:CDS |
| TGTGGCCTCAGAACTATGAT+TGG | 0.557466 | 5_3:-15928847 | Msa0801780:CDS |
| TATACTTCTAGCAGTGAGCT+TGG | 0.561501 | 5_3:-15930721 | Msa0801780:CDS |
| CCTGCAGGGAGGGAAAGAAT+AGG | 0.562148 | 5_3:+15928680 | None:intergenic |
| TGTTGGGTCCCGCCACACCT+CGG | 0.563389 | 5_3:-15931965 | Msa0801780:CDS |
| GCAGGAAGAAATGTTAAGAC+AGG | 0.563802 | 5_3:-15931928 | Msa0801780:CDS |
| AAGATAAACCTTGATACAAG+TGG | 0.564857 | 5_3:-15928947 | Msa0801780:CDS |
| ATATGAACTCCTTACTTGGA+TGG | 0.567551 | 5_3:+15931689 | None:intergenic |
| AAGTGAGGCAGGTCGTGGAC+TGG | 0.570777 | 5_3:-15930076 | Msa0801780:CDS |
| GCAGTTATACTAAACAAAGC+AGG | 0.571510 | 5_3:-15929148 | Msa0801780:CDS |
| TACATAAACCCTAATGCAAG+CGG | 0.572665 | 5_3:-15929235 | Msa0801780:CDS |
| AATGTAAGGTCTAGAAACGT+TGG | 0.573084 | 5_3:+15927609 | None:intergenic |
| AAGCAGGAGTATCTTTAGGA+TGG | 0.573501 | 5_3:-15929132 | Msa0801780:CDS |
| TGACAGACTCGTGGAAAAGG+TGG | 0.577684 | 5_3:-15927780 | Msa0801780:CDS |
| ATCACAGGGGAGTTCAGCAA+AGG | 0.579430 | 5_3:-15927929 | Msa0801780:intron |
| CCATGAAACATCCAAACCCT+AGG | 0.579518 | 5_3:+15929179 | None:intergenic |
| GCTAGCTTTCTAATACCACT+TGG | 0.582232 | 5_3:-15931102 | Msa0801780:CDS |
| TTGCTAGAAAATTCAAAGGG+TGG | 0.585446 | 5_3:+15932543 | None:intergenic |
| GTATTTGCTAGAAAATTCAA+AGG | 0.588449 | 5_3:+15932539 | None:intergenic |
| TATTGAACCATTCCGAGGTG+TGG | 0.589233 | 5_3:+15931953 | None:intergenic |
| TCACAGGGGAGTTCAGCAAA+GGG | 0.590204 | 5_3:-15927928 | Msa0801780:intron |
| TATCCCTTATGAGTTGATGA+AGG | 0.590814 | 5_3:+15930192 | None:intergenic |
| CATGACAAATATAATTGTAA+CGG | 0.591074 | 5_3:-15931187 | Msa0801780:CDS |
| GCTGTAGCTTTGATGGGGAA+AGG | 0.592024 | 5_3:-15930039 | Msa0801780:CDS |
| GCTGTGATTGCTATAGGATG+GGG | 0.593161 | 5_3:-15927890 | Msa0801780:CDS |
| TATTTGCTAGAAAATTCAAA+GGG | 0.594519 | 5_3:+15932540 | None:intergenic |
| GCCCCACTAGCATACCAGAA+AGG | 0.595213 | 5_3:+15931714 | None:intergenic |
| TGAACCATTCCGAGGTGTGG+CGG | 0.597924 | 5_3:+15931956 | None:intergenic |
| TCACACCATGGGCAATCTTG+TGG | 0.600054 | 5_3:-15930628 | Msa0801780:CDS |
| CTCCAGTTAGTATAGAAACA+AGG | 0.602432 | 5_3:+15928897 | None:intergenic |
| GACAGGTATGGCTAGAGAAG+AGG | 0.607176 | 5_3:-15931990 | Msa0801780:intron |
| CACTGCTAGAAGTATAGACC+AGG | 0.609126 | 5_3:+15930728 | None:intergenic |
| GTAATAGTCTATACACTAGC+CGG | 0.609302 | 5_3:-15931078 | Msa0801780:CDS |
| TATATAGCTTGCTAAGAATG+TGG | 0.612716 | 5_3:+15931044 | None:intergenic |
| AATTGGAGCAATTCTTGGAA+CGG | 0.613648 | 5_3:-15929029 | Msa0801780:CDS |
| CTTGTTTCTATACTAACTGG+AGG | 0.616805 | 5_3:-15928896 | Msa0801780:CDS |
| TTTACCACTAAATGAAAGTG+AGG | 0.622014 | 5_3:-15930091 | Msa0801780:CDS |
| AAGCGATTGTAAACAACACT+CGG | 0.625276 | 5_3:+15930694 | None:intergenic |
| TGCTCCCAAACCAAGTGATG+TGG | 0.625837 | 5_3:+15930125 | None:intergenic |
| TTAAAGAAGAAAAGTTAACA+AGG | 0.630039 | 5_3:-15928763 | Msa0801780:CDS |
| GTTTACAAATGACAGACTCG+TGG | 0.631670 | 5_3:-15927789 | Msa0801780:CDS |
| TAAAGAAGAAAAGTTAACAA+GGG | 0.632578 | 5_3:-15928762 | Msa0801780:CDS |
| AAAGTTTGGATTGTGAAATG+GGG | 0.632622 | 5_3:-15928737 | Msa0801780:CDS |
| AAATACTATCATCAAAATGG+AGG | 0.635967 | 5_3:-15932522 | Msa0801780:CDS |
| CATAAGGGATACTTATTGGG+AGG | 0.636991 | 5_3:-15930180 | Msa0801780:CDS |
| TGCTGTATTGAACCATTCCG+AGG | 0.637779 | 5_3:+15931948 | None:intergenic |
| AAAATCCTCAGAGTATCAAG+AGG | 0.639360 | 5_3:-15929208 | Msa0801780:CDS |
| CAAGATCCTATATCACACCA+TGG | 0.641417 | 5_3:-15930640 | Msa0801780:CDS |
| GTAGCTTTGATGGGGAAAGG+TGG | 0.641774 | 5_3:-15930036 | Msa0801780:CDS |
| AAGATCCTATATCACACCAT+GGG | 0.648778 | 5_3:-15930639 | Msa0801780:CDS |
| GCCAGTTAATGCATTTACAA+CGG | 0.652103 | 5_3:+15931140 | None:intergenic |
| CAGGACCACAAGATTGCCCA+TGG | 0.652413 | 5_3:+15930623 | None:intergenic |
| GTATAGACTATTACTCCAAG+TGG | 0.653123 | 5_3:+15931087 | None:intergenic |
| GTGCTCCAATCATAGTTCTG+AGG | 0.655203 | 5_3:+15928842 | None:intergenic |
| GGAAAAGACTGATTTGCCAG+TGG | 0.659563 | 5_3:-15928792 | Msa0801780:CDS |
| GCTTACATTGTCAACAAACA+CGG | 0.660565 | 5_3:+15930510 | None:intergenic |
| TGTGTGAAATTGTCAAAGCT+CGG | 0.666874 | 5_3:-15931501 | Msa0801780:intron |
| CCTGTTAGTGGAAATCACAA+AGG | 0.667554 | 5_3:-15930604 | Msa0801780:CDS |
| CTACTGCTGTAGCTTTGATG+GGG | 0.672744 | 5_3:-15930044 | Msa0801780:CDS |
| CAACACCTCTTGATACTCTG+AGG | 0.681682 | 5_3:+15929203 | None:intergenic |
| CCAACTCAGAGTTACCTGCA+GGG | 0.681921 | 5_3:+15928666 | None:intergenic |
| ATATGTGCATAACGAGGACA+CGG | 0.689114 | 5_3:+15929273 | None:intergenic |
| AAAGCTACAGCAGTAGCTGG+AGG | 0.691896 | 5_3:+15930051 | None:intergenic |
| CACTACCAAACAAATTACTG+TGG | 0.692164 | 5_3:-15928822 | Msa0801780:CDS |
| ATAGTCTATACACTAGCCGG+TGG | 0.700130 | 5_3:-15931075 | Msa0801780:CDS |
| ACTCAGAGTTACCTGCAGGG+AGG | 0.701035 | 5_3:+15928669 | None:intergenic |
| ATCTTACATAGGAAGCTCTG+AGG | 0.725309 | 5_3:+15927661 | None:intergenic |
| GATATCATATGTGCATAACG+AGG | 0.736768 | 5_3:+15929267 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCGTTTAAATAATTTA+CGG | - | chr5_3:15929774-15929793 | Msa0801780:intron | 10.0% |
| !! | AAATTAAAGAAATTTCAAAT+TGG | - | chr5_3:15930358-15930377 | Msa0801780:intron | 10.0% |
| !!! | AATAAATATTTAAAATCATC+AGG | + | chr5_3:15930920-15930939 | None:intergenic | 10.0% |
| !!! | GATTTTAAATATTTATTATC+AGG | - | chr5_3:15930923-15930942 | Msa0801780:intron | 10.0% |
| !!! | AAAAAAAAAATGTTTTTGTT+AGG | - | chr5_3:15932033-15932052 | Msa0801780:intron | 10.0% |
| !! | TTTGATATAAACATTCTTAT+TGG | - | chr5_3:15928241-15928260 | Msa0801780:intron | 15.0% |
| !!! | TATTTTAGCTATATAAAAAG+TGG | + | chr5_3:15929883-15929902 | None:intergenic | 15.0% |
| !! | AAATACAAAGTATGATTAAA+GGG | - | chr5_3:15929911-15929930 | Msa0801780:intron | 15.0% |
| !!! | ATCCAAAAATTTCAATTTTA+GGG | + | chr5_3:15930385-15930404 | None:intergenic | 15.0% |
| !!! | TATTTGCTAGAAAATTCAAA+GGG | + | chr5_3:15927716-15927735 | None:intergenic | 20.0% |
| !! | TATATCAAACAAATTCAACA+TGG | + | chr5_3:15928230-15928249 | None:intergenic | 20.0% |
| !! | AAGAAAATGTAACTAATTTG+AGG | + | chr5_3:15928419-15928438 | None:intergenic | 20.0% |
| !! | CAAATTGAATGTTAAGATAA+GGG | + | chr5_3:15928444-15928463 | None:intergenic | 20.0% |
| !! | ACAAATTGAATGTTAAGATA+AGG | + | chr5_3:15928445-15928464 | None:intergenic | 20.0% |
| !! | AACTCAAAATTCTGATATAT+TGG | - | chr5_3:15928619-15928638 | Msa0801780:intron | 20.0% |
| !! | AATTCTGATATATTGGAATT+TGG | - | chr5_3:15928626-15928645 | Msa0801780:intron | 20.0% |
| !! | ATATATTGGAATTTGGAAAA+TGG | - | chr5_3:15928633-15928652 | Msa0801780:intron | 20.0% |
| !!! | AAGTTTTAAGAAGTAATAGT+AGG | - | chr5_3:15928835-15928854 | Msa0801780:CDS | 20.0% |
| !! | CATGACAAATATAATTGTAA+CGG | - | chr5_3:15929066-15929085 | Msa0801780:CDS | 20.0% |
| !! | GAAATACAAAGTATGATTAA+AGG | - | chr5_3:15929910-15929929 | Msa0801780:intron | 20.0% |
| !! | ACAACTGTTATAATTGAAAA+AGG | + | chr5_3:15929974-15929993 | None:intergenic | 20.0% |
| !! | TGTTTAAATGTGAAATGTTT+AGG | - | chr5_3:15930009-15930028 | Msa0801780:CDS | 20.0% |
| !! | GTTTAAATGTGAAATGTTTA+GGG | - | chr5_3:15930010-15930029 | Msa0801780:CDS | 20.0% |
| !!! | TCCAAAAATTTCAATTTTAG+GGG | + | chr5_3:15930384-15930403 | None:intergenic | 20.0% |
| !!! | GATCCAAAAATTTCAATTTT+AGG | + | chr5_3:15930386-15930405 | None:intergenic | 20.0% |
| !!! | GATTAAGAATTTTCTATTTC+CGG | - | chr5_3:15930453-15930472 | Msa0801780:intron | 20.0% |
| !!! | ATTAAGAATTTTCTATTTCC+GGG | - | chr5_3:15930454-15930473 | Msa0801780:intron | 20.0% |
| !! | AATTTAGTCCATAAAATTGT+AGG | + | chr5_3:15930522-15930541 | None:intergenic | 20.0% |
| !!! | TACAATTTTATGGACTAAAT+TGG | - | chr5_3:15930521-15930540 | Msa0801780:CDS | 20.0% |
| !!! | AAACAAGTAAATAGCTATTT+TGG | - | chr5_3:15930596-15930615 | Msa0801780:CDS | 20.0% |
| !!! | TTCTTTTGTTAGTAGTTTTA+CGG | - | chr5_3:15930687-15930706 | Msa0801780:CDS | 20.0% |
| !! | AATCATCAGGTAAAATAATA+AGG | + | chr5_3:15930907-15930926 | None:intergenic | 20.0% |
| !! | TTAAAGAAGAAAAGTTAACA+AGG | - | chr5_3:15931490-15931509 | Msa0801780:intron | 20.0% |
| !! | TAAAGAAGAAAAGTTAACAA+GGG | - | chr5_3:15931491-15931510 | Msa0801780:intron | 20.0% |
| !!! | AAGTTTGTTAAGAGAAATTA+GGG | - | chr5_3:15931942-15931961 | Msa0801780:CDS | 20.0% |
| !!! | CTAGAAAAAAAACACAATTT+TGG | + | chr5_3:15932079-15932098 | None:intergenic | 20.0% |
| !! | TTTGTTTATTCATTATCACA+GGG | - | chr5_3:15932310-15932329 | Msa0801780:intron | 20.0% |
| !!! | TCAAACACTTTTTTCTTTCA+TGG | - | chr5_3:15927670-15927689 | Msa0801780:CDS | 25.0% |
| !! | GTATTTGCTAGAAAATTCAA+AGG | + | chr5_3:15927717-15927736 | None:intergenic | 25.0% |
| ! | AGCAAATACTATCATCAAAA+TGG | - | chr5_3:15927728-15927747 | Msa0801780:CDS | 25.0% |
| ! | AAATACTATCATCAAAATGG+AGG | - | chr5_3:15927731-15927750 | Msa0801780:CDS | 25.0% |
| !! | TATTCTATCATTCTTGGTTT+TGG | - | chr5_3:15927815-15927834 | Msa0801780:CDS | 25.0% |
| ! | GAAAGGAAGATACTTATTTA+AGG | + | chr5_3:15927884-15927903 | None:intergenic | 25.0% |
| ! | ACTTGTACAACATATAAGAA+AGG | + | chr5_3:15927901-15927920 | None:intergenic | 25.0% |
| !! | AATTAAGTTGTCTATCCAAA+TGG | - | chr5_3:15928077-15928096 | Msa0801780:intron | 25.0% |
| !! | TGAATGAATTTGGTTTAGTT+TGG | + | chr5_3:15928200-15928219 | None:intergenic | 25.0% |
| ! | CTAAACCAAATTCATTCATT+TGG | - | chr5_3:15928202-15928221 | Msa0801780:intron | 25.0% |
| ! | TATAAACATTCTTATTGGAC+AGG | - | chr5_3:15928246-15928265 | Msa0801780:intron | 25.0% |
| ! | TATAATATGAACTCCTTACT+TGG | + | chr5_3:15928571-15928590 | None:intergenic | 25.0% |
| ! | AGTAAGGAGTTCATATTATA+AGG | - | chr5_3:15928571-15928590 | Msa0801780:intron | 25.0% |
| ! | TATGATCAGGTAATGTTATT+TGG | - | chr5_3:15928682-15928701 | Msa0801780:CDS | 25.0% |
| !! | GGTAATGTTATTTGGAATTA+TGG | - | chr5_3:15928690-15928709 | Msa0801780:CDS | 25.0% |
| ! | TTGAGATTAACTTTGATACA+CGG | - | chr5_3:15929288-15929307 | Msa0801780:CDS | 25.0% |
| ! | ACAAAGAAATACACAGTTTA+AGG | + | chr5_3:15929464-15929483 | None:intergenic | 25.0% |
| !! | TTTGGGATTATTAACATTGT+TGG | - | chr5_3:15929709-15929728 | Msa0801780:intron | 25.0% |
| ! | TTATAATTGAAAAAGGTGAC+AGG | + | chr5_3:15929967-15929986 | None:intergenic | 25.0% |
| ! | TTCATTTAGTGGTAAATCTA+GGG | + | chr5_3:15930158-15930177 | None:intergenic | 25.0% |
| ! | TTTCATTTAGTGGTAAATCT+AGG | + | chr5_3:15930159-15930178 | None:intergenic | 25.0% |
| ! | TGTAACTTACATAAAAAGCA+TGG | + | chr5_3:15930260-15930279 | None:intergenic | 25.0% |
| !!! | TAGACAAAAGTATTTCCAAA+AGG | + | chr5_3:15930291-15930310 | None:intergenic | 25.0% |
| ! | TTGTCTACTCTAGATAAAAT+TGG | - | chr5_3:15930304-15930323 | Msa0801780:intron | 25.0% |
| ! | ACTGAAATAACCAATTCAAA+AGG | - | chr5_3:15930422-15930441 | Msa0801780:intron | 25.0% |
| !! | TTAATGTTCTATACGCTTTT+AGG | - | chr5_3:15930567-15930586 | Msa0801780:CDS | 25.0% |
| ! | TTTGTAAGTCGATACATTAT+GGG | + | chr5_3:15930652-15930671 | None:intergenic | 25.0% |
| ! | ACTAACAAAAGAAATCCTTA+GGG | + | chr5_3:15930680-15930699 | None:intergenic | 25.0% |
| ! | TACTAACAAAAGAAATCCTT+AGG | + | chr5_3:15930681-15930700 | None:intergenic | 25.0% |
| ! | TAAAGTTTGGATTGTGAAAT+GGG | - | chr5_3:15931515-15931534 | Msa0801780:CDS | 25.0% |
| !!! | CTGTTTTGATAGTTATACTA+TGG | - | chr5_3:15931550-15931569 | Msa0801780:CDS | 25.0% |
| ! | ATACATCAACAATGACAATT+AGG | - | chr5_3:15931644-15931663 | Msa0801780:intron | 25.0% |
| ! | TTACTTGTCATACTAATGAT+AGG | - | chr5_3:15931885-15931904 | Msa0801780:intron | 25.0% |
| ! | ACTTGTTTACATTGTATGAA+GGG | + | chr5_3:15931926-15931945 | None:intergenic | 25.0% |
| !! | AACTTGTTTACATTGTATGA+AGG | + | chr5_3:15931927-15931946 | None:intergenic | 25.0% |
| !!! | CAAGTTTGTTAAGAGAAATT+AGG | - | chr5_3:15931941-15931960 | Msa0801780:CDS | 25.0% |
| !! | TGATTTTTGTGAAATGTAAG+GGG | + | chr5_3:15931982-15932001 | None:intergenic | 25.0% |
| !! | GTGATTTTTGTGAAATGTAA+GGG | + | chr5_3:15931983-15932002 | None:intergenic | 25.0% |
| !! | TGTGATTTTTGTGAAATGTA+AGG | + | chr5_3:15931984-15932003 | None:intergenic | 25.0% |
| !!! | TTCTGAAGTATACTTCTAAA+TGG | - | chr5_3:15932009-15932028 | Msa0801780:intron | 25.0% |
| ! | TATAAATCAAACTACTACGA+GGG | + | chr5_3:15932151-15932170 | None:intergenic | 25.0% |
| ! | TTATAAATCAAACTACTACG+AGG | + | chr5_3:15932152-15932171 | None:intergenic | 25.0% |
| ! | GTTTGTTTATTCATTATCAC+AGG | - | chr5_3:15932309-15932328 | Msa0801780:intron | 25.0% |
| ! | TTGTTTATTCATTATCACAG+GGG | - | chr5_3:15932311-15932330 | Msa0801780:intron | 25.0% |
| ! | CTTCCTATGTAAGATTTATA+AGG | - | chr5_3:15932600-15932619 | Msa0801780:five_prime_UTR | 25.0% |
| !!! | TTGGTGATTTTGATACAATT+TGG | + | chr5_3:15932628-15932647 | None:intergenic | 25.0% |
| GTTGGATATTCTATCATTCT+TGG | - | chr5_3:15927809-15927828 | Msa0801780:CDS | 30.0% | |
| ATGATTACTAACCAAGAAAG+AGG | + | chr5_3:15927861-15927880 | None:intergenic | 30.0% | |
| ACTTTAAACTTGTAGATGGA+AGG | + | chr5_3:15928172-15928191 | None:intergenic | 30.0% | |
| ACACACTTTAAACTTGTAGA+TGG | + | chr5_3:15928176-15928195 | None:intergenic | 30.0% | |
| ! | ATTTGAGGTTTGTAAAAGTG+TGG | + | chr5_3:15928404-15928423 | None:intergenic | 30.0% |
| ! | GGAAAATGGAAAGTGTAATA+AGG | - | chr5_3:15928647-15928666 | Msa0801780:intron | 30.0% |
| GGCTATAGAGATTAAAAGAA+AGG | - | chr5_3:15928711-15928730 | Msa0801780:CDS | 30.0% | |
| AATGTTTGTTTACCTCAGTT+GGG | - | chr5_3:15929006-15929025 | Msa0801780:CDS | 30.0% | |
| !! | TATATAGCTTGCTAAGAATG+TGG | + | chr5_3:15929212-15929231 | None:intergenic | 30.0% |
| TCTCAATGTTAATACTGTTG+AGG | + | chr5_3:15929274-15929293 | None:intergenic | 30.0% | |
| TACTGTAAAAGTCATACGAA+AGG | + | chr5_3:15929355-15929374 | None:intergenic | 30.0% | |
| TTGATTCATTTATGTGTACC+TGG | - | chr5_3:15929413-15929432 | Msa0801780:intron | 30.0% | |
| ATAAATGAATCAACATGACC+AGG | + | chr5_3:15929434-15929453 | None:intergenic | 30.0% | |
| TACTTAACAATGCTTAGTTC+AGG | - | chr5_3:15929676-15929695 | Msa0801780:intron | 30.0% | |
| ATTAACATTGTTGGCAACTT+TGG | - | chr5_3:15929718-15929737 | Msa0801780:intron | 30.0% | |
| AACTCATAAGGGATACTTAT+TGG | - | chr5_3:15930069-15930088 | Msa0801780:CDS | 30.0% | |
| ACTCATAAGGGATACTTATT+GGG | - | chr5_3:15930070-15930089 | Msa0801780:CDS | 30.0% | |
| TTTACCACTAAATGAAAGTG+AGG | - | chr5_3:15930162-15930181 | Msa0801780:CDS | 30.0% | |
| ! | ACATAAAAAGCATGGTAAGA+AGG | + | chr5_3:15930252-15930271 | None:intergenic | 30.0% |
| TAGATAAAATTGGAATTGCC+AGG | - | chr5_3:15930314-15930333 | Msa0801780:intron | 30.0% | |
| AGATAAAATTGGAATTGCCA+GGG | - | chr5_3:15930315-15930334 | Msa0801780:intron | 30.0% | |
| AAACTAAATTACTTGAACCC+TGG | + | chr5_3:15930335-15930354 | None:intergenic | 30.0% | |
| ! | GCCCCTAAAATTGAAATTTT+TGG | - | chr5_3:15930380-15930399 | Msa0801780:intron | 30.0% |
| ! | TCACAACAATCCTTTTGAAT+TGG | + | chr5_3:15930435-15930454 | None:intergenic | 30.0% |
| TTGTAATTCTCAAATGATCC+CGG | + | chr5_3:15930475-15930494 | None:intergenic | 30.0% | |
| ! | GATTGATGCCTACAATTTTA+TGG | - | chr5_3:15930511-15930530 | Msa0801780:intron | 30.0% |
| GTTTGTAAGTCGATACATTA+TGG | + | chr5_3:15930653-15930672 | None:intergenic | 30.0% | |
| AATGTATCTGAATGTGTGTT+TGG | + | chr5_3:15930791-15930810 | None:intergenic | 30.0% | |
| !! | TTAAAATTTTGATACCCTCG+AGG | - | chr5_3:15930812-15930831 | Msa0801780:intron | 30.0% |
| !!! | GTGTTTTTGGAATAATCACA+TGG | - | chr5_3:15931256-15931275 | Msa0801780:intron | 30.0% |
| TCTGTTACAAAGATAGAGTA+TGG | - | chr5_3:15931282-15931301 | Msa0801780:intron | 30.0% | |
| AAGATAAACCTTGATACAAG+TGG | - | chr5_3:15931306-15931325 | Msa0801780:intron | 30.0% | |
| !! | AACCTTGTTTCTATACTAAC+TGG | - | chr5_3:15931354-15931373 | Msa0801780:intron | 30.0% |
| !! | TTCAACCACAGTAATTTGTT+TGG | + | chr5_3:15931439-15931458 | None:intergenic | 30.0% |
| ACAAATTACTGTGGTTGAAA+AGG | - | chr5_3:15931440-15931459 | Msa0801780:intron | 30.0% | |
| CTAAAGTTTGGATTGTGAAA+TGG | - | chr5_3:15931514-15931533 | Msa0801780:CDS | 30.0% | |
| AAAGTTTGGATTGTGAAATG+GGG | - | chr5_3:15931516-15931535 | Msa0801780:CDS | 30.0% | |
| CTTCCATCCAAATAACTTAT+TGG | - | chr5_3:15931708-15931727 | Msa0801780:CDS | 30.0% | |
| AATTCCGCCAATAAGTTATT+TGG | + | chr5_3:15931718-15931737 | None:intergenic | 30.0% | |
| CAAACTACACAAATAAGTCA+TGG | + | chr5_3:15931799-15931818 | None:intergenic | 30.0% | |
| TGTAATTTCAAAATCACGTG+TGG | - | chr5_3:15931823-15931842 | Msa0801780:intron | 30.0% | |
| TTAGTATGACAAGTAAGTCA+TGG | + | chr5_3:15931881-15931900 | None:intergenic | 30.0% | |
| TTGTTTACATTGTATGAAGG+GGG | + | chr5_3:15931924-15931943 | None:intergenic | 30.0% | |
| CTTGTTTACATTGTATGAAG+GGG | + | chr5_3:15931925-15931944 | None:intergenic | 30.0% | |
| ! | GTAATATTTAGAATGCGTAG+AGG | + | chr5_3:15932183-15932202 | None:intergenic | 30.0% |
| AGTTTGTCAAATCTCAAAAC+AGG | - | chr5_3:15932230-15932249 | Msa0801780:intron | 30.0% | |
| AACAGGTAACATATCTGATT+TGG | - | chr5_3:15932247-15932266 | Msa0801780:intron | 30.0% | |
| TTTACCAATAATAGAGAGCT+GGG | - | chr5_3:15932413-15932432 | Msa0801780:CDS | 30.0% | |
| ACATTCCTAGAATAACAGTT+TGG | + | chr5_3:15932446-15932465 | None:intergenic | 30.0% | |
| GCACCTTATAAATCTTACAT+AGG | + | chr5_3:15932606-15932625 | None:intergenic | 30.0% | |
| TTGCTAGAAAATTCAAAGGG+TGG | + | chr5_3:15927713-15927732 | None:intergenic | 35.0% | |
| TACTATCATCAAAATGGAGG+TGG | - | chr5_3:15927734-15927753 | Msa0801780:CDS | 35.0% | |
| AGACAAGCAAGTTTCTTTGA+AGG | - | chr5_3:15927764-15927783 | Msa0801780:CDS | 35.0% | |
| AAAACCATAATCATAGCCCT+TGG | - | chr5_3:15927983-15928002 | Msa0801780:intron | 35.0% | |
| TAAGTGTGACAAACTCCATT+TGG | + | chr5_3:15928095-15928114 | None:intergenic | 35.0% | |
| TGGCACCAAATGAATGAATT+TGG | + | chr5_3:15928210-15928229 | None:intergenic | 35.0% | |
| ACATTCTTATTGGACAGGTA+TGG | - | chr5_3:15928251-15928270 | Msa0801780:intron | 35.0% | |
| ! | TCAATTTGTTTGTTCTGCAG+TGG | - | chr5_3:15928456-15928475 | Msa0801780:intron | 35.0% |
| ATATGAACTCCTTACTTGGA+TGG | + | chr5_3:15928567-15928586 | None:intergenic | 35.0% | |
| TGTGTGAAATTGTCAAAGCT+CGG | - | chr5_3:15928752-15928771 | Msa0801780:CDS | 35.0% | |
| ACTATGCATCTACGCTAAAT+AGG | + | chr5_3:15928903-15928922 | None:intergenic | 35.0% | |
| CAATGTTTGTTTACCTCAGT+TGG | - | chr5_3:15929005-15929024 | Msa0801780:CDS | 35.0% | |
| ATGTTTGTTTACCTCAGTTG+GGG | - | chr5_3:15929007-15929026 | Msa0801780:CDS | 35.0% | |
| TTGTCATGAAGCAGAAGAAA+AGG | + | chr5_3:15929054-15929073 | None:intergenic | 35.0% | |
| GCCAGTTAATGCATTTACAA+CGG | + | chr5_3:15929116-15929135 | None:intergenic | 35.0% | |
| GTATAGACTATTACTCCAAG+TGG | + | chr5_3:15929169-15929188 | None:intergenic | 35.0% | |
| GTAATAGTCTATACACTAGC+CGG | - | chr5_3:15929175-15929194 | Msa0801780:CDS | 35.0% | |
| AGCTATATACACTCTGTCAT+AGG | - | chr5_3:15929223-15929242 | Msa0801780:CDS | 35.0% | |
| ! | ATTTTCAGTGCACGTTGTTT+TGG | - | chr5_3:15929489-15929508 | Msa0801780:intron | 35.0% |
| !!! | TTTGGTCATTTTTGTGTACC+TGG | - | chr5_3:15929507-15929526 | Msa0801780:intron | 35.0% |
| AAGCGATTGTAAACAACACT+CGG | + | chr5_3:15929562-15929581 | None:intergenic | 35.0% | |
| AAGATCCTATATCACACCAT+GGG | - | chr5_3:15929614-15929633 | Msa0801780:intron | 35.0% | |
| TTAACAATGCTTAGTTCAGG+TGG | - | chr5_3:15929679-15929698 | Msa0801780:intron | 35.0% | |
| GCTTACATTGTCAACAAACA+CGG | + | chr5_3:15929746-15929765 | None:intergenic | 35.0% | |
| TAAAGGGATAGCATGATGAA+AGG | - | chr5_3:15929927-15929946 | Msa0801780:intron | 35.0% | |
| ! | TGTGAAATGTTTAGGGCTAT+TGG | - | chr5_3:15930017-15930036 | Msa0801780:CDS | 35.0% |
| ! | GTGAAATGTTTAGGGCTATT+GGG | - | chr5_3:15930018-15930037 | Msa0801780:CDS | 35.0% |
| AAGACCTTCATCAACTCATA+AGG | - | chr5_3:15930057-15930076 | Msa0801780:CDS | 35.0% | |
| AGACCTTCATCAACTCATAA+GGG | - | chr5_3:15930058-15930077 | Msa0801780:CDS | 35.0% | |
| !! | TATCCCTTATGAGTTGATGA+AGG | + | chr5_3:15930064-15930083 | None:intergenic | 35.0% |
| ! | AGTTACAATCTGCTACCTTT+TGG | - | chr5_3:15930273-15930292 | Msa0801780:intron | 35.0% |
| AGTCGATACATTATGGGAAT+AGG | + | chr5_3:15930646-15930665 | None:intergenic | 35.0% | |
| !! | TTGGCTAGTCATTTTGGTAT+TGG | + | chr5_3:15930772-15930791 | None:intergenic | 35.0% |
| GACAACGTTTCACACATTTA+AGG | - | chr5_3:15930843-15930862 | Msa0801780:intron | 35.0% | |
| GATATCATATGTGCATAACG+AGG | + | chr5_3:15930989-15931008 | None:intergenic | 35.0% | |
| TACATAAACCCTAATGCAAG+CGG | - | chr5_3:15931018-15931037 | Msa0801780:intron | 35.0% | |
| ! | TTTTCTTTCCGCTTGCATTA+GGG | + | chr5_3:15931029-15931048 | None:intergenic | 35.0% |
| ! | ATTTTCTTTCCGCTTGCATT+AGG | + | chr5_3:15931030-15931049 | None:intergenic | 35.0% |
| ! | AAAATCCTCAGAGTATCAAG+AGG | - | chr5_3:15931045-15931064 | Msa0801780:CDS | 35.0% |
| GCAGTTATACTAAACAAAGC+AGG | - | chr5_3:15931105-15931124 | Msa0801780:CDS | 35.0% | |
| !! | AACAAAGCAGGAGTATCTTT+AGG | - | chr5_3:15931117-15931136 | Msa0801780:CDS | 35.0% |
| CAATAAAAACTCCCATTGCA+AGG | + | chr5_3:15931152-15931171 | None:intergenic | 35.0% | |
| ! | CTTGCAATGGGAGTTTTTAT+TGG | - | chr5_3:15931150-15931169 | Msa0801780:CDS | 35.0% |
| ! | CATAGAAGCATGAAAGCAAT+AGG | + | chr5_3:15931189-15931208 | None:intergenic | 35.0% |
| CTATTGCTTTCATGCTTCTA+TGG | - | chr5_3:15931187-15931206 | Msa0801780:CDS | 35.0% | |
| TGGAGAAAAGCAAATGCAAT+TGG | - | chr5_3:15931207-15931226 | Msa0801780:CDS | 35.0% | |
| AATGCAATTGGAGCAATTCT+TGG | - | chr5_3:15931219-15931238 | Msa0801780:CDS | 35.0% | |
| AATTGGAGCAATTCTTGGAA+CGG | - | chr5_3:15931224-15931243 | Msa0801780:CDS | 35.0% | |
| ! | ACGGTATTTGGTTGTGTTTT+TGG | - | chr5_3:15931243-15931262 | Msa0801780:intron | 35.0% |
| CATTTCTTCCACTTGTATCA+AGG | + | chr5_3:15931317-15931336 | None:intergenic | 35.0% | |
| CTCCAGTTAGTATAGAAACA+AGG | + | chr5_3:15931359-15931378 | None:intergenic | 35.0% | |
| !! | CTTGTTTCTATACTAACTGG+AGG | - | chr5_3:15931357-15931376 | Msa0801780:intron | 35.0% |
| CACTACCAAACAAATTACTG+TGG | - | chr5_3:15931431-15931450 | Msa0801780:intron | 35.0% | |
| TCTTCTTTAAACTCTTCCAC+TGG | + | chr5_3:15931480-15931499 | None:intergenic | 35.0% | |
| AGTTAACAAGGGCTAAAGTT+TGG | - | chr5_3:15931502-15931521 | Msa0801780:CDS | 35.0% | |
| CAACAATGACAATTAGGCTT+TGG | - | chr5_3:15931650-15931669 | Msa0801780:intron | 35.0% | |
| CCATCCAAATAACTTATTGG+CGG | - | chr5_3:15931711-15931730 | Msa0801780:CDS | 35.0% | |
| !! | TGTACATCTGAACTGATTTG+GGG | + | chr5_3:15931748-15931767 | None:intergenic | 35.0% |
| ! | GTGTACATCTGAACTGATTT+GGG | + | chr5_3:15931749-15931768 | None:intergenic | 35.0% |
| TGTGTACATCTGAACTGATT+TGG | + | chr5_3:15931750-15931769 | None:intergenic | 35.0% | |
| !!! | CAAAATCACGTGTGGTTTTT+TGG | - | chr5_3:15931831-15931850 | Msa0801780:intron | 35.0% |
| !!! | TGTGGTTTTTTGGAAATGTG+AGG | - | chr5_3:15931841-15931860 | Msa0801780:intron | 35.0% |
| ! | TTTTTGTGAAATGTAAGGGG+TGG | + | chr5_3:15931979-15931998 | None:intergenic | 35.0% |
| ! | AAACTACTACGAGGGATTTT+GGG | + | chr5_3:15932143-15932162 | None:intergenic | 35.0% |
| !!! | CAAAGGGTACTTCTTTTTCT+GGG | - | chr5_3:15932341-15932360 | Msa0801780:intron | 35.0% |
| CTTTACCAATAATAGAGAGC+TGG | - | chr5_3:15932412-15932431 | Msa0801780:CDS | 35.0% | |
| ACCATCCAAACTGTTATTCT+AGG | - | chr5_3:15932438-15932457 | Msa0801780:CDS | 35.0% | |
| TCCTAGAATAACAGTTTGGA+TGG | + | chr5_3:15932442-15932461 | None:intergenic | 35.0% | |
| CAAGTTGCATACAATCATAC+AGG | - | chr5_3:15932509-15932528 | Msa0801780:CDS | 35.0% | |
| GAGACTTTACTTGCTTGAAA+AGG | - | chr5_3:15932548-15932567 | Msa0801780:CDS | 35.0% | |
| !!! | CTCTGAGGCTTCTAATTTTT+TGG | + | chr5_3:15932580-15932599 | None:intergenic | 35.0% |
| AATGTAAGGTCTAGAAACGT+TGG | + | chr5_3:15932647-15932666 | None:intergenic | 35.0% | |
| GGCAAACATGTGCTTAATCA+AGG | - | chr5_3:15927785-15927804 | Msa0801780:CDS | 40.0% | |
| CATGTGCTTAATCAAGGAGT+TGG | - | chr5_3:15927791-15927810 | Msa0801780:CDS | 40.0% | |
| TGAACCAAGGGCTATGATTA+TGG | + | chr5_3:15927990-15928009 | None:intergenic | 40.0% | |
| TACTCCTATAGTCAGCCAAA+GGG | + | chr5_3:15928045-15928064 | None:intergenic | 40.0% | |
| ATACTCCTATAGTCAGCCAA+AGG | + | chr5_3:15928046-15928065 | None:intergenic | 40.0% | |
| GCAGGAAGAAATGTTAAGAC+AGG | - | chr5_3:15928325-15928344 | Msa0801780:intron | 40.0% | |
| AAGCAACATTAGAGCTTTGC+AGG | + | chr5_3:15928499-15928518 | None:intergenic | 40.0% | |
| ! | TGCAAAGCTCTAATGTTGCT+TGG | - | chr5_3:15928498-15928517 | Msa0801780:intron | 40.0% |
| ! | GCAAAGCTCTAATGTTGCTT+GGG | - | chr5_3:15928499-15928518 | Msa0801780:intron | 40.0% |
| ! | TCTAATGTTGCTTGGGAGTA+TGG | - | chr5_3:15928506-15928525 | Msa0801780:intron | 40.0% |
| ! | CTAATGTTGCTTGGGAGTAT+GGG | - | chr5_3:15928507-15928526 | Msa0801780:intron | 40.0% |
| ! | TAATGTTGCTTGGGAGTATG+GGG | - | chr5_3:15928508-15928527 | Msa0801780:intron | 40.0% |
| GCTGAGATTTGACTATGATC+AGG | - | chr5_3:15928669-15928688 | Msa0801780:intron | 40.0% | |
| TCACACACAGTATGAGCATA+TGG | + | chr5_3:15928739-15928758 | None:intergenic | 40.0% | |
| TGTTTGTTTACCTCAGTTGG+GGG | - | chr5_3:15929008-15929027 | Msa0801780:CDS | 40.0% | |
| ! | GTAACGGCTATGTTACTTCT+TGG | - | chr5_3:15929082-15929101 | Msa0801780:CDS | 40.0% |
| GCCGTTGTAAATGCATTAAC+TGG | - | chr5_3:15929112-15929131 | Msa0801780:CDS | 40.0% | |
| !! | GCTAGCTTTCTAATACCACT+TGG | - | chr5_3:15929151-15929170 | Msa0801780:CDS | 40.0% |
| TATACTTCTAGCAGTGAGCT+TGG | - | chr5_3:15929532-15929551 | Msa0801780:intron | 40.0% | |
| CATGGTGTGATATAGGATCT+TGG | + | chr5_3:15929615-15929634 | None:intergenic | 40.0% | |
| CAAGATCCTATATCACACCA+TGG | - | chr5_3:15929613-15929632 | Msa0801780:intron | 40.0% | |
| CCTTTGTGATTTCCACTAAC+AGG | + | chr5_3:15929652-15929671 | None:intergenic | 40.0% | |
| CCTGTTAGTGGAAATCACAA+AGG | - | chr5_3:15929649-15929668 | Msa0801780:intron | 40.0% | |
| !! | AGTTCAGGTGGCTTAGTTTT+TGG | - | chr5_3:15929691-15929710 | Msa0801780:intron | 40.0% |
| !! | GTTCAGGTGGCTTAGTTTTT+GGG | - | chr5_3:15929692-15929711 | Msa0801780:intron | 40.0% |
| CATAAGGGATACTTATTGGG+AGG | - | chr5_3:15930073-15930092 | Msa0801780:CDS | 40.0% | |
| !!! | GTTTGCAGTGCCATTTTCTT+TGG | - | chr5_3:15930105-15930124 | Msa0801780:CDS | 40.0% |
| AGTGATGTGGCCAAAGAAAA+TGG | + | chr5_3:15930118-15930137 | None:intergenic | 40.0% | |
| ! | TTTTCTTTGGCCACATCACT+TGG | - | chr5_3:15930118-15930137 | Msa0801780:CDS | 40.0% |
| GACTTACAAACACAACCCTA+AGG | - | chr5_3:15930662-15930681 | Msa0801780:CDS | 40.0% | |
| !! | GTGTGTTTGGCTAGTCATTT+TGG | + | chr5_3:15930778-15930797 | None:intergenic | 40.0% |
| ATATGTGCATAACGAGGACA+CGG | + | chr5_3:15930983-15931002 | None:intergenic | 40.0% | |
| !! | TATCAAGAGGTGTTGTCCTA+GGG | - | chr5_3:15931058-15931077 | Msa0801780:CDS | 40.0% |
| CTAGGGTTTGGATGTTTCAT+GGG | - | chr5_3:15931075-15931094 | Msa0801780:CDS | 40.0% | |
| !! | AAGCAGGAGTATCTTTAGGA+TGG | - | chr5_3:15931121-15931140 | Msa0801780:CDS | 40.0% |
| GCAATTCTTGGAACGGTATT+TGG | - | chr5_3:15931231-15931250 | Msa0801780:CDS | 40.0% | |
| ! | ATGCTGTTTGTAGCATGTTG+TGG | - | chr5_3:15931388-15931407 | Msa0801780:intron | 40.0% |
| TGGATTGTGAAATGGGGTAT+TGG | - | chr5_3:15931522-15931541 | Msa0801780:CDS | 40.0% | |
| ! | TGACAATTAGGCTTTGGTCT+AGG | - | chr5_3:15931656-15931675 | Msa0801780:intron | 40.0% |
| ! | TAGGCTTTGGTCTAGGAAAA+AGG | - | chr5_3:15931663-15931682 | Msa0801780:intron | 40.0% |
| GCTAATGAAGTCCTTGCTTT+AGG | - | chr5_3:15931685-15931704 | Msa0801780:intron | 40.0% | |
| CCGCCAATAAGTTATTTGGA+TGG | + | chr5_3:15931714-15931733 | None:intergenic | 40.0% | |
| !! | GTACATCTGAACTGATTTGG+GGG | + | chr5_3:15931747-15931766 | None:intergenic | 40.0% |
| !!! | GGTTTTTTGGAAATGTGAGG+TGG | - | chr5_3:15931844-15931863 | Msa0801780:intron | 40.0% |
| ! | CAAACTACTACGAGGGATTT+TGG | + | chr5_3:15932144-15932163 | None:intergenic | 40.0% |
| !!! | GCAAAGGGTACTTCTTTTTC+TGG | - | chr5_3:15932340-15932359 | Msa0801780:intron | 40.0% |
| GTATCCCAGCTCTCTATTAT+TGG | + | chr5_3:15932420-15932439 | None:intergenic | 40.0% | |
| GTTTACAAATGACAGACTCG+TGG | - | chr5_3:15932464-15932483 | Msa0801780:CDS | 40.0% | |
| AAATGACAGACTCGTGGAAA+AGG | - | chr5_3:15932470-15932489 | Msa0801780:CDS | 40.0% | |
| AAGTAAAGTCTCTCTGCTTC+TGG | + | chr5_3:15932540-15932559 | None:intergenic | 40.0% | |
| ATCTTACATAGGAAGCTCTG+AGG | + | chr5_3:15932595-15932614 | None:intergenic | 40.0% | |
| TGCTCTCTTCACCTCTTTCT+TGG | - | chr5_3:15927847-15927866 | Msa0801780:CDS | 45.0% | |
| ! | GGATTCTGTTGGTGAACCAA+GGG | + | chr5_3:15928002-15928021 | None:intergenic | 45.0% |
| TGAGATACCTCGGATTCTGT+TGG | + | chr5_3:15928013-15928032 | None:intergenic | 45.0% | |
| ! | ACAGAATCCGAGGTATCTCA+CGG | - | chr5_3:15928013-15928032 | Msa0801780:intron | 45.0% |
| !! | ACGTTACACATTTTCGGGGA+GGG | + | chr5_3:15928130-15928149 | None:intergenic | 45.0% |
| TCCCCGAAAATGTGTAACGT+GGG | - | chr5_3:15928130-15928149 | Msa0801780:intron | 45.0% | |
| ACTTGTAGATGGAAGGACCA+AGG | + | chr5_3:15928165-15928184 | None:intergenic | 45.0% | |
| ! | TGGCTAGAGAAGAGGTATGT+TGG | - | chr5_3:15928271-15928290 | Msa0801780:intron | 45.0% |
| ! | GGCTAGAGAAGAGGTATGTT+GGG | - | chr5_3:15928272-15928291 | Msa0801780:intron | 45.0% |
| TATTGAACCATTCCGAGGTG+TGG | + | chr5_3:15928303-15928322 | None:intergenic | 45.0% | |
| TGCTGTATTGAACCATTCCG+AGG | + | chr5_3:15928308-15928327 | None:intergenic | 45.0% | |
| TCGGAATGGTTCAATACAGC+AGG | - | chr5_3:15928307-15928326 | Msa0801780:intron | 45.0% | |
| TGCTAGTGTCATAGTGTCTC+AGG | - | chr5_3:15928354-15928373 | Msa0801780:intron | 45.0% | |
| ! | TGTTTGTTCTGCAGTGGACT+TGG | - | chr5_3:15928462-15928481 | Msa0801780:intron | 45.0% |
| ! | GTTTGTTCTGCAGTGGACTT+GGG | - | chr5_3:15928463-15928482 | Msa0801780:intron | 45.0% |
| ! | GACCTTTCTGGTATGCTAGT+GGG | - | chr5_3:15928537-15928556 | Msa0801780:intron | 45.0% |
| ! | ACCTTTCTGGTATGCTAGTG+GGG | - | chr5_3:15928538-15928557 | Msa0801780:intron | 45.0% |
| ! | ACGGCTATGTTACTTCTTGG+TGG | - | chr5_3:15929085-15929104 | Msa0801780:CDS | 45.0% |
| ATAGTCTATACACTAGCCGG+TGG | - | chr5_3:15929178-15929197 | Msa0801780:CDS | 45.0% | |
| ! | CACTGCTAGAAGTATAGACC+AGG | + | chr5_3:15929528-15929547 | None:intergenic | 45.0% |
| GATTGCCCATGGTGTGATAT+AGG | + | chr5_3:15929622-15929641 | None:intergenic | 45.0% | |
| CAATCTTGTGGTCCTGTTAG+TGG | - | chr5_3:15929637-15929656 | Msa0801780:intron | 45.0% | |
| TTTGGCCACATCACTTGGTT+TGG | - | chr5_3:15930123-15930142 | Msa0801780:CDS | 45.0% | |
| TTGGCCACATCACTTGGTTT+GGG | - | chr5_3:15930124-15930143 | Msa0801780:CDS | 45.0% | |
| CCTGCCTCACTTTCATTTAG+TGG | + | chr5_3:15930169-15930188 | None:intergenic | 45.0% | |
| CCACTAAATGAAAGTGAGGC+AGG | - | chr5_3:15930166-15930185 | Msa0801780:CDS | 45.0% | |
| ATCAAAGCTACAGCAGTAGC+TGG | + | chr5_3:15930208-15930227 | None:intergenic | 45.0% | |
| !! | AGCTACTGCTGTAGCTTTGA+TGG | - | chr5_3:15930207-15930226 | Msa0801780:CDS | 45.0% |
| !! | GCTACTGCTGTAGCTTTGAT+GGG | - | chr5_3:15930208-15930227 | Msa0801780:CDS | 45.0% |
| !! | CTACTGCTGTAGCTTTGATG+GGG | - | chr5_3:15930209-15930228 | Msa0801780:CDS | 45.0% |
| GGAATCTGTACTTCGTCAGT+TGG | + | chr5_3:15930751-15930770 | None:intergenic | 45.0% | |
| GTTGTCACAATAGTCCTCGA+GGG | + | chr5_3:15930829-15930848 | None:intergenic | 45.0% | |
| CAACACCTCTTGATACTCTG+AGG | + | chr5_3:15931053-15931072 | None:intergenic | 45.0% | |
| !! | GTATCAAGAGGTGTTGTCCT+AGG | - | chr5_3:15931057-15931076 | Msa0801780:CDS | 45.0% |
| CCATGAAACATCCAAACCCT+AGG | + | chr5_3:15931077-15931096 | None:intergenic | 45.0% | |
| CCTAGGGTTTGGATGTTTCA+TGG | - | chr5_3:15931074-15931093 | Msa0801780:CDS | 45.0% | |
| AGGATGGATGTACCTTGCAA+TGG | - | chr5_3:15931137-15931156 | Msa0801780:CDS | 45.0% | |
| GGATGGATGTACCTTGCAAT+GGG | - | chr5_3:15931138-15931157 | Msa0801780:CDS | 45.0% | |
| AGAAATGCACCAATGCTTGC+TGG | - | chr5_3:15931330-15931349 | Msa0801780:intron | 45.0% | |
| ACAAGGTTTCCAGCAAGCAT+TGG | + | chr5_3:15931342-15931361 | None:intergenic | 45.0% | |
| TGTGGCCTCAGAACTATGAT+TGG | - | chr5_3:15931406-15931425 | Msa0801780:intron | 45.0% | |
| ! | GTGCTCCAATCATAGTTCTG+AGG | + | chr5_3:15931414-15931433 | None:intergenic | 45.0% |
| !! | GGAAAAGACTGATTTGCCAG+TGG | - | chr5_3:15931461-15931480 | Msa0801780:intron | 45.0% |
| TTGGATGGAAGCCTAAAGCA+AGG | + | chr5_3:15931699-15931718 | None:intergenic | 45.0% | |
| !! | ATCTGAACTGATTTGGGGGT+GGG | + | chr5_3:15931743-15931762 | None:intergenic | 45.0% |
| ! | ATGAAGGGGGCACATTAATG+TGG | + | chr5_3:15931911-15931930 | None:intergenic | 45.0% |
| ! | CATCTGAAATGACTTGTGGG+TGG | - | chr5_3:15932106-15932125 | Msa0801780:intron | 45.0% |
| TTCTGGGCTGTGATTGCTAT+AGG | - | chr5_3:15932357-15932376 | Msa0801780:intron | 45.0% | |
| GGCTGTGATTGCTATAGGAT+GGG | - | chr5_3:15932362-15932381 | Msa0801780:intron | 45.0% | |
| GCTGTGATTGCTATAGGATG+GGG | - | chr5_3:15932363-15932382 | Msa0801780:intron | 45.0% | |
| GCTATAGGATGGGGTACAAT+AGG | - | chr5_3:15932372-15932391 | Msa0801780:intron | 45.0% | |
| !!! | ATTTTAAATATTTATTATCA+GGG | - | chr5_3:15930924-15930943 | Msa0801780:intron | 5.0% |
| ! | CGGATTCTGTTGGTGAACCA+AGG | + | chr5_3:15928003-15928022 | None:intergenic | 50.0% |
| TGGTTCACCAACAGAATCCG+AGG | - | chr5_3:15928003-15928022 | Msa0801780:intron | 50.0% | |
| CCTATAGTCAGCCAAAGGGT+CGG | + | chr5_3:15928041-15928060 | None:intergenic | 50.0% | |
| !! | TACACATTTTCGGGGAGGGA+CGG | + | chr5_3:15928126-15928145 | None:intergenic | 50.0% |
| !! | CACGTTACACATTTTCGGGG+AGG | + | chr5_3:15928131-15928150 | None:intergenic | 50.0% |
| CTCCCCGAAAATGTGTAACG+TGG | - | chr5_3:15928129-15928148 | Msa0801780:intron | 50.0% | |
| ! | CCCCACGTTACACATTTTCG+GGG | + | chr5_3:15928134-15928153 | None:intergenic | 50.0% |
| CCCCGAAAATGTGTAACGTG+GGG | - | chr5_3:15928131-15928150 | Msa0801780:intron | 50.0% | |
| ! | CCCCCACGTTACACATTTTC+GGG | + | chr5_3:15928135-15928154 | None:intergenic | 50.0% |
| CCCGAAAATGTGTAACGTGG+GGG | - | chr5_3:15928132-15928151 | Msa0801780:intron | 50.0% | |
| ! | CCCCCCACGTTACACATTTT+CGG | + | chr5_3:15928136-15928155 | None:intergenic | 50.0% |
| CCGAAAATGTGTAACGTGGG+GGG | - | chr5_3:15928133-15928152 | Msa0801780:intron | 50.0% | |
| GACAGGTATGGCTAGAGAAG+AGG | - | chr5_3:15928263-15928282 | Msa0801780:intron | 50.0% | |
| ! | ATGGGGTTAGTGGACCTTTC+TGG | - | chr5_3:15928525-15928544 | Msa0801780:intron | 50.0% |
| ! | GGACCTTTCTGGTATGCTAG+TGG | - | chr5_3:15928536-15928555 | Msa0801780:intron | 50.0% |
| TCACACCATGGGCAATCTTG+TGG | - | chr5_3:15929625-15929644 | Msa0801780:intron | 50.0% | |
| GGGATACTTATTGGGAGGTC+TGG | - | chr5_3:15930078-15930097 | Msa0801780:CDS | 50.0% | |
| ACTTATTGGGAGGTCTGGTC+TGG | - | chr5_3:15930083-15930102 | Msa0801780:CDS | 50.0% | |
| TGCTCCCAAACCAAGTGATG+TGG | + | chr5_3:15930131-15930150 | None:intergenic | 50.0% | |
| AATGAAAGTGAGGCAGGTCG+TGG | - | chr5_3:15930172-15930191 | Msa0801780:CDS | 50.0% | |
| AAAGCTACAGCAGTAGCTGG+AGG | + | chr5_3:15930205-15930224 | None:intergenic | 50.0% | |
| !! | GCTGTAGCTTTGATGGGGAA+AGG | - | chr5_3:15930214-15930233 | Msa0801780:CDS | 50.0% |
| !! | GTAGCTTTGATGGGGAAAGG+TGG | - | chr5_3:15930217-15930236 | Msa0801780:CDS | 50.0% |
| CGTTGTCACAATAGTCCTCG+AGG | + | chr5_3:15930830-15930849 | None:intergenic | 50.0% | |
| !! | AGAGGTGTTGTCCTAGGGTT+TGG | - | chr5_3:15931063-15931082 | Msa0801780:CDS | 50.0% |
| CCAACTCAGAGTTACCTGCA+GGG | + | chr5_3:15931590-15931609 | None:intergenic | 50.0% | |
| TCCAACTCAGAGTTACCTGC+AGG | + | chr5_3:15931591-15931610 | None:intergenic | 50.0% | |
| !! | CATCTGAACTGATTTGGGGG+TGG | + | chr5_3:15931744-15931763 | None:intergenic | 50.0% |
| ! | CTACTACGAGGGATTTTGGG+AGG | + | chr5_3:15932140-15932159 | None:intergenic | 50.0% |
| ATCACAGGGGAGTTCAGCAA+AGG | - | chr5_3:15932324-15932343 | Msa0801780:intron | 50.0% | |
| TCACAGGGGAGTTCAGCAAA+GGG | - | chr5_3:15932325-15932344 | Msa0801780:intron | 50.0% | |
| GGGCTGTGATTGCTATAGGA+TGG | - | chr5_3:15932361-15932380 | Msa0801780:intron | 50.0% | |
| TGACAGACTCGTGGAAAAGG+TGG | - | chr5_3:15932473-15932492 | Msa0801780:CDS | 50.0% | |
| GTCGGAACCGTGAGATACCT+CGG | + | chr5_3:15928023-15928042 | None:intergenic | 55.0% | |
| ATCTCACGGTTCCGACCCTT+TGG | - | chr5_3:15928027-15928046 | Msa0801780:intron | 55.0% | |
| CCGACCCTTTGGCTGACTAT+AGG | - | chr5_3:15928038-15928057 | Msa0801780:intron | 55.0% | |
| AACGTGGGGGGATCAAACCT+TGG | - | chr5_3:15928145-15928164 | Msa0801780:intron | 55.0% | |
| TGAACCATTCCGAGGTGTGG+CGG | + | chr5_3:15928300-15928319 | None:intergenic | 55.0% | |
| ! | GCTTGGGAGTATGGGGTTAG+TGG | - | chr5_3:15928515-15928534 | Msa0801780:intron | 55.0% |
| GCCCCACTAGCATACCAGAA+AGG | + | chr5_3:15928542-15928561 | None:intergenic | 55.0% | |
| GTGGGGCTACCATCCAAGTA+AGG | - | chr5_3:15928555-15928574 | Msa0801780:intron | 55.0% | |
| ! | TACACTAGCCGGTGGACTCA+AGG | - | chr5_3:15929186-15929205 | Msa0801780:CDS | 55.0% |
| ! | GAATGTGGCCTTGAGTCCAC+CGG | + | chr5_3:15929197-15929216 | None:intergenic | 55.0% |
| CAGGACCACAAGATTGCCCA+TGG | + | chr5_3:15929633-15929652 | None:intergenic | 55.0% | |
| ATCAGGGCAGTGACTTCTGC+TGG | - | chr5_3:15930940-15930959 | Msa0801780:intron | 55.0% | |
| CCTGCAGGGAGGGAAAGAAT+AGG | + | chr5_3:15931576-15931595 | None:intergenic | 55.0% | |
| CCTATTCTTTCCCTCCCTGC+AGG | - | chr5_3:15931573-15931592 | Msa0801780:intron | 55.0% | |
| CTCAGAGTTACCTGCAGGGA+GGG | + | chr5_3:15931586-15931605 | None:intergenic | 55.0% | |
| ACTCAGAGTTACCTGCAGGG+AGG | + | chr5_3:15931587-15931606 | None:intergenic | 55.0% | |
| CCCTGCAGGTAACTCTGAGT+TGG | - | chr5_3:15931587-15931606 | Msa0801780:intron | 55.0% | |
| GAACCATTCCGAGGTGTGGC+GGG | + | chr5_3:15928299-15928318 | None:intergenic | 60.0% | |
| GTGCTGAAGTCCCCCAACTG+AGG | + | chr5_3:15929021-15929040 | None:intergenic | 60.0% | |
| AAGTGAGGCAGGTCGTGGAC+TGG | - | chr5_3:15930177-15930196 | Msa0801780:CDS | 60.0% | |
| TGTTGGGTCCCGCCACACCT+CGG | - | chr5_3:15928288-15928307 | Msa0801780:intron | 65.0% | |
| GGTCCCGCCACACCTCGGAA+TGG | - | chr5_3:15928293-15928312 | Msa0801780:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 15927605 | 15932670 | 15927605 | ID=Msa0801780;Name=Msa0801780 |
| chr5_3 | mRNA | 15927605 | 15932670 | 15927605 | ID=Msa0801780-mRNA-1;Parent=Msa0801780;Name=Msa0801780-mRNA-1;_AED=0.06;_eAED=0.06;_QI=84|1|1|1|1|1|9|59|706 |
| chr5_3 | exon | 15927605 | 15927944 | 15927605 | ID=Msa0801780-mRNA-1:exon:6633;Parent=Msa0801780-mRNA-1 |
| chr5_3 | exon | 15928681 | 15929330 | 15928681 | ID=Msa0801780-mRNA-1:exon:6632;Parent=Msa0801780-mRNA-1 |
| chr5_3 | exon | 15930006 | 15930244 | 15930006 | ID=Msa0801780-mRNA-1:exon:6631;Parent=Msa0801780-mRNA-1 |
| chr5_3 | exon | 15930516 | 15930778 | 15930516 | ID=Msa0801780-mRNA-1:exon:6630;Parent=Msa0801780-mRNA-1 |
| chr5_3 | exon | 15931031 | 15931251 | 15931031 | ID=Msa0801780-mRNA-1:exon:6629;Parent=Msa0801780-mRNA-1 |
| chr5_3 | exon | 15931502 | 15931584 | 15931502 | ID=Msa0801780-mRNA-1:exon:6628;Parent=Msa0801780-mRNA-1 |
| chr5_3 | exon | 15931704 | 15931799 | 15931704 | ID=Msa0801780-mRNA-1:exon:6627;Parent=Msa0801780-mRNA-1 |
| chr5_3 | exon | 15931900 | 15932007 | 15931900 | ID=Msa0801780-mRNA-1:exon:6626;Parent=Msa0801780-mRNA-1 |
| chr5_3 | exon | 15932407 | 15932670 | 15932407 | ID=Msa0801780-mRNA-1:exon:6625;Parent=Msa0801780-mRNA-1 |
| chr5_3 | five_prime_UTR | 15932587 | 15932670 | 15932587 | ID=Msa0801780-mRNA-1:five_prime_utr;Parent=Msa0801780-mRNA-1 |
| chr5_3 | CDS | 15932407 | 15932586 | 15932407 | ID=Msa0801780-mRNA-1:cds;Parent=Msa0801780-mRNA-1 |
| chr5_3 | CDS | 15931900 | 15932007 | 15931900 | ID=Msa0801780-mRNA-1:cds;Parent=Msa0801780-mRNA-1 |
| chr5_3 | CDS | 15931704 | 15931799 | 15931704 | ID=Msa0801780-mRNA-1:cds;Parent=Msa0801780-mRNA-1 |
| chr5_3 | CDS | 15931502 | 15931584 | 15931502 | ID=Msa0801780-mRNA-1:cds;Parent=Msa0801780-mRNA-1 |
| chr5_3 | CDS | 15931031 | 15931251 | 15931031 | ID=Msa0801780-mRNA-1:cds;Parent=Msa0801780-mRNA-1 |
| chr5_3 | CDS | 15930516 | 15930778 | 15930516 | ID=Msa0801780-mRNA-1:cds;Parent=Msa0801780-mRNA-1 |
| chr5_3 | CDS | 15930006 | 15930244 | 15930006 | ID=Msa0801780-mRNA-1:cds;Parent=Msa0801780-mRNA-1 |
| chr5_3 | CDS | 15928681 | 15929330 | 15928681 | ID=Msa0801780-mRNA-1:cds;Parent=Msa0801780-mRNA-1 |
| chr5_3 | CDS | 15927664 | 15927944 | 15927664 | ID=Msa0801780-mRNA-1:cds;Parent=Msa0801780-mRNA-1 |
| chr5_3 | three_prime_UTR | 15927605 | 15927663 | 15927605 | ID=Msa0801780-mRNA-1:three_prime_utr;Parent=Msa0801780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
