AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0763890


Find 300 sgRNAs with CRISPR-Local

Find 852 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr5_2 gene 23326205 23339674 23326205 ID=Msa0763890;Name=Msa0763890
chr5_2 mRNA 23326205 23339674 23326205 ID=Msa0763890-mRNA-1;Parent=Msa0763890;Name=Msa0763890-mRNA-1;_AED=0.13;_eAED=0.13;_QI=315|0.90|0.90|1|0.85|0.77|22|420|1209
chr5_2 exon 23326205 23326604 23326205 ID=Msa0763890-mRNA-1:exon:9644;Parent=Msa0763890-mRNA-1
chr5_2 exon 23326832 23327007 23326832 ID=Msa0763890-mRNA-1:exon:9643;Parent=Msa0763890-mRNA-1
chr5_2 exon 23327158 23327263 23327158 ID=Msa0763890-mRNA-1:exon:9642;Parent=Msa0763890-mRNA-1
chr5_2 exon 23327350 23327507 23327350 ID=Msa0763890-mRNA-1:exon:9641;Parent=Msa0763890-mRNA-1
chr5_2 exon 23327603 23327755 23327603 ID=Msa0763890-mRNA-1:exon:9640;Parent=Msa0763890-mRNA-1
chr5_2 exon 23327917 23327983 23327917 ID=Msa0763890-mRNA-1:exon:9639;Parent=Msa0763890-mRNA-1
chr5_2 exon 23328075 23328175 23328075 ID=Msa0763890-mRNA-1:exon:9638;Parent=Msa0763890-mRNA-1
chr5_2 exon 23329374 23330003 23329374 ID=Msa0763890-mRNA-1:exon:9637;Parent=Msa0763890-mRNA-1
chr5_2 exon 23330817 23330887 23330817 ID=Msa0763890-mRNA-1:exon:9636;Parent=Msa0763890-mRNA-1
chr5_2 exon 23331030 23331668 23331030 ID=Msa0763890-mRNA-1:exon:9635;Parent=Msa0763890-mRNA-1
chr5_2 exon 23332119 23332373 23332119 ID=Msa0763890-mRNA-1:exon:9634;Parent=Msa0763890-mRNA-1
chr5_2 exon 23332454 23332581 23332454 ID=Msa0763890-mRNA-1:exon:9633;Parent=Msa0763890-mRNA-1
chr5_2 exon 23334254 23334408 23334254 ID=Msa0763890-mRNA-1:exon:9632;Parent=Msa0763890-mRNA-1
chr5_2 exon 23334511 23334791 23334511 ID=Msa0763890-mRNA-1:exon:9631;Parent=Msa0763890-mRNA-1
chr5_2 exon 23334918 23334950 23334918 ID=Msa0763890-mRNA-1:exon:9630;Parent=Msa0763890-mRNA-1
chr5_2 exon 23335026 23335107 23335026 ID=Msa0763890-mRNA-1:exon:9629;Parent=Msa0763890-mRNA-1
chr5_2 exon 23335781 23335917 23335781 ID=Msa0763890-mRNA-1:exon:9628;Parent=Msa0763890-mRNA-1
chr5_2 exon 23336383 23336659 23336383 ID=Msa0763890-mRNA-1:exon:9627;Parent=Msa0763890-mRNA-1
chr5_2 exon 23338151 23338271 23338151 ID=Msa0763890-mRNA-1:exon:9626;Parent=Msa0763890-mRNA-1
chr5_2 exon 23339039 23339167 23339039 ID=Msa0763890-mRNA-1:exon:9625;Parent=Msa0763890-mRNA-1
chr5_2 exon 23339259 23339285 23339259 ID=Msa0763890-mRNA-1:exon:9624;Parent=Msa0763890-mRNA-1
chr5_2 exon 23339436 23339674 23339436 ID=Msa0763890-mRNA-1:exon:9623;Parent=Msa0763890-mRNA-1
chr5_2 five_prime_UTR 23339436 23339674 23339436 ID=Msa0763890-mRNA-1:five_prime_utr;Parent=Msa0763890-mRNA-1
chr5_2 five_prime_UTR 23339259 23339285 23339259 ID=Msa0763890-mRNA-1:five_prime_utr;Parent=Msa0763890-mRNA-1
chr5_2 five_prime_UTR 23339119 23339167 23339119 ID=Msa0763890-mRNA-1:five_prime_utr;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23339039 23339118 23339039 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23338151 23338271 23338151 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23336383 23336659 23336383 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23335781 23335917 23335781 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23335026 23335107 23335026 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23334918 23334950 23334918 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23334511 23334791 23334511 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23334254 23334408 23334254 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23332454 23332581 23332454 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23332119 23332373 23332119 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23331030 23331668 23331030 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23330817 23330887 23330817 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23329374 23330003 23329374 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23328075 23328175 23328075 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23327917 23327983 23327917 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23327603 23327755 23327603 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23327350 23327507 23327350 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23327158 23327263 23327158 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 CDS 23326852 23327007 23326852 ID=Msa0763890-mRNA-1:cds;Parent=Msa0763890-mRNA-1
chr5_2 three_prime_UTR 23326832 23326851 23326832 ID=Msa0763890-mRNA-1:three_prime_utr;Parent=Msa0763890-mRNA-1
chr5_2 three_prime_UTR 23326205 23326604 23326205 ID=Msa0763890-mRNA-1:three_prime_utr;Parent=Msa0763890-mRNA-1
Gene Sequence

>Msa0763890

ATGAAGCGGTCACGTGAGGACGGTTTCATGAGTTCATCTCAACTCAAACGACCTATGCTGAATACTTCTAGAGGAGAAGCGTCCGGGCAACCGCCGAATCGAGGTGGTCAAAAACTGACTACTAATGATGCCTTAGCATATCTCAAGGCGGTCAAGGATATATTTCAAGATAAGAAGGAAAAGTATGAGGACTTTTTGGAGAGAGAGAGGACCATTGTTTCACATGGTGACCATGACCCTAGTGTTGACCGTCCTGACCAAGATCACGATGGAGGTTCGTTGAGGGCAGAAAAGGAGCGTAAGAGACGCATGGAGAAGGAAAAGGACCGTAGAGAAGATAGAGGCAGGAGAGAACGGGAACGAGATTATGAGCACGACAGGGGTCGAGATAGGGAGAGGTTATCCCACAAACGGAAATCTGATCATAAGGCTGAAGACTCAGGAGCTGAACCATTGCTTGATGCAGATCAAAATTTCGGTACGCATAGCCAGGAGTTAGCTTTCTGTGATAAAGTCAAAGAGAGATTACGAAATCCTGTTGACTACCAGGAGTTTTTGAAGTGTGTACATATTTACAACAAGGAAATTATTACTCGACAAGAATTGCAATCACTGGTGGGTGGTTCTGGTTTATTGGGAGACTATCCCGATCTTATGGAAATTTTTAATGAATTTTTGTTGCAAGCTGAGAAGAATGGTGGTGGATTCCTTACTGGCGTCATGAATAGAAAGTCCTTATGGATTGAAGGACGTGGACTGAAACCAATGAATGCTGAACAGAGGGATAGAGATAGGGATGATGATAGGGATCGTTACAGGGATGATGAGATGAAAGAAAGGGACCGTGAATTCCGAGAAAGGGACAAATCTCCCGTGATCAACAAGGATGTTTCAGGTTCTAAGATGTCCCTATGTCCCAGCAAGGATAAGTATCTCTCAAAGCCAATAAATGAGCTGGACCTTTCTAACTGTGAGCGATGCACTCCTAGTTACCGCCTCCTACCAAAAAATTATCCAATACCGATTGCTAGCCAGAAAACAGATCTTGGTGCAGAAGTGTTGAATGATCACTGGGTGTCAGTCACTTCAGGAAGTGAGGATTACTCCTTTAAACATATGCGCAAAAATCAGTATGAAGAAAGTTTGTTTAGATGTGAAGATGACAGGTTTGAACTTGATATGTTGGTAGAGTCTGTCAGTGCGACAACCACGCGAGTAGAAGAGCTGTTAGAAGTTATCAGCAAAAATCCAATTAAAGGAGACAGCCCTATTTGTATTGAGGAGCACTTAACAGCTCTAAATTTCAGGTGTATTGAACGGATATATGGTGATCATGGTCTTGATGTGTTGGAAGTGCTAAGGAAGAAACCATCTGTAGCTTTGCCAGTGATATTAACACGCTTGAAGCAGAAACAGGAAGAGTGGGCAAGATGTCGTGCTGATTTCGGTAAAGTTTGGGCTGAAATATATGCCAAGAATTATCACAAATCTCTTGATCATCGTAGCTTCTACTTTAAGCAACAGGACACAAGGAGCTTGAGCACCAAAGCCCTACTGACTGAAATCAAAGAGATCAGTGAGAAGAAACACAAAGAAGACGATGTTCTTCTTGCAATTGCTGCTGGTAATAGACGGCCTATTCTTCCAAACCTGGAGTTTGAGTACATTGATCCAGACATCCATGAAGATTTGTATCGGCTTATAAAATATTCGTGTGCAGAAGTTTGCACAACTGAACAGTTGGATAAAGTTATGAAGATTTGGACAACATTTTTAGAACCGATGCTTTGTGTTCCTTGTCGGTCCCAGGGCGCTGGGGATACTGAAGAAGTTGTGACTAAGAATAATTCTGTGAGAAATGTTGCTGAAACTGATGGTAATCCTGGTGTTGGGGCTGCCATAATGAACCCAAAGCATATAAGTACTTCTAGAAATGGTGATGAGTGTGTGCCAATAGATCAGTCAACTTCTAGCAAAGCATGGAAATCAAATGGTGACAATGGGATTGGAGAAGATAAATGTCTTGATCCAGACCGTACTATGCATAAAAGTGAAACTTTTGACAGTAGTCCAGAACATATTTTTGCATTCCTTGATCTCACTGGTGGGGAGTTAGTGGATGCTAATGTCTCGCCAGCATCTGGAATGGAGCTAAGTAATGGAAGAACAGAGATAGATAATACATCAGGATTTGCTGCTACTCCATCTAGAAATGGTAATGTATCTGTCACCAGAGGACTCGAGTTACCTTCATCAGAGGGTGGTGATTCTGCTAGACTATGTGCATCCACAAATGGGGCCATCGCTGGAGGCACTGAAGTGTGCAGATACCAAGAGGAATCGAATCGACAGTTCAAAAGCGAAAGAGAAGAGGGTGAGTTATCTCCAAATGGAGACTTTGAAGAGGATAATTTTGCAGTTTGTGGAGATGCTGGTTCGGAGGCAGTGCATAAAGGAAATTATGGTGGTGTGAAACGGCAATATCAAAATAGATGTGGCGAAGAAGTTTGTGGTGAAGCCAGAGGAGAAAATTATGCAGATGCTGATGATGAAGGGGAAGAAAGTCCTCAGAGGTCATCAGAGGGCAGTGAAAATGCTTCTGGAGACGATGTTTCTGGAAGCGAATCTGCTGATGGAGAGGAGTGCTCCCAAGAAGAGCATGAGGATGGAGAACATGATGATAAGGCTGAAAGTGAAGGTGAAGCTGAAGGAATGGCTGATGCACATGATGTTGAAGGAGATGGAACGTCATTACCATTTTCTGAACGCTTTATTCTAAATGTGAAGCCATTGGCAAAGCATGTTCCCCCAGTGTTACATGTCGAAGACAAGAATTCTCGAGTTTTTTATGGAAATGACTCCTTCTATGTGCTGATTAGACTTCATCAGACATTGTATGAGAGGATACACGCAGCAAAGGTTAACTCATCATCCGCTGAAAGGAAATGGAGGGCTTCAAATAATACAAGCTCCACTGATCAATATGATAGGTTCATGATTGCCCTTTACAGTTTACTGGATGGTTCTTCTGATAATACAAATTTGAGGATGACTGTCCTTCAAGCTGTTGCGAGCGATGAGATGGATAATAAGCTGCTTCAACTATATGCATATGAGAAATCAAGAAAACCTGGAAAGTTTGTCGATATAGTTTATCACGAAAATGCTCGTGTTCTTCTTCATGATGAGAACATATATCGTATTGAATATTCACCAAAACCAAAGACACTGTCTATTCAACTCATGGACTGTGGAAATGAGAAGCATGAAGTGACTGCTGTGTTAGTGGACCCAAATTTTACAACCTATCTGCACAATGATTTCCTCTCTATTGTCTCTGACAAAAAGTCGGGGATTTTCTTGAAAAGGAACAAACGTGGCTACGCCTGTAGTGATGAATTTTCAAGCGAGGTTATGGAAGGACTGCAAATTATTAATGGTCTGGAGTGTAAGATAGCTTCCAATTCTTCTAAGGTGTCGTACGTTTTAGATACCGAAGACTTCTTGTTTCGGACTAGAAGCAGAAGAAAAGCATTGCATCTGAAGAGTTCATGCTATGAAGAACGAAAGCCTTCAAACATTCGTTCAAGCAGAGTAGCAAGGTTCCGCAAATTGTTTTCCTTCATGTGA

Protein sequence

>Msa0763890

MKRSREDGFMSSSQLKRPMLNTSRGEASGQPPNRGGQKLTTNDALAYLKAVKDIFQDKKEKYEDFLERERTIVSHGDHDPSVDRPDQDHDGGSLRAEKERKRRMEKEKDRREDRGRRERERDYEHDRGRDRERLSHKRKSDHKAEDSGAEPLLDADQNFGTHSQELAFCDKVKERLRNPVDYQEFLKCVHIYNKEIITRQELQSLVGGSGLLGDYPDLMEIFNEFLLQAEKNGGGFLTGVMNRKSLWIEGRGLKPMNAEQRDRDRDDDRDRYRDDEMKERDREFRERDKSPVINKDVSGSKMSLCPSKDKYLSKPINELDLSNCERCTPSYRLLPKNYPIPIASQKTDLGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLVESVSATTTRVEELLEVISKNPIKGDSPICIEEHLTALNFRCIERIYGDHGLDVLEVLRKKPSVALPVILTRLKQKQEEWARCRADFGKVWAEIYAKNYHKSLDHRSFYFKQQDTRSLSTKALLTEIKEISEKKHKEDDVLLAIAAGNRRPILPNLEFEYIDPDIHEDLYRLIKYSCAEVCTTEQLDKVMKIWTTFLEPMLCVPCRSQGAGDTEEVVTKNNSVRNVAETDGNPGVGAAIMNPKHISTSRNGDECVPIDQSTSSKAWKSNGDNGIGEDKCLDPDRTMHKSETFDSSPEHIFAFLDLTGGELVDANVSPASGMELSNGRTEIDNTSGFAATPSRNGNVSVTRGLELPSSEGGDSARLCASTNGAIAGGTEVCRYQEESNRQFKSEREEGELSPNGDFEEDNFAVCGDAGSEAVHKGNYGGVKRQYQNRCGEEVCGEARGENYADADDEGEESPQRSSEGSENASGDDVSGSESADGEECSQEEHEDGEHDDKAESEGEAEGMADAHDVEGDGTSLPFSERFILNVKPLAKHVPPVLHVEDKNSRVFYGNDSFYVLIRLHQTLYERIHAAKVNSSSAERKWRASNNTSSTDQYDRFMIALYSLLDGSSDNTNLRMTVLQAVASDEMDNKLLQLYAYEKSRKPGKFVDIVYHENARVLLHDENIYRIEYSPKPKTLSIQLMDCGNEKHEVTAVLVDPNFTTYLHNDFLSIVSDKKSGIFLKRNKRGYACSDEFSSEVMEGLQIINGLECKIASNSSKVSYVLDTEDFLFRTRSRRKALHLKSSCYEERKPSNIRSSRVARFRKLFSFM*