Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0894680 | XP_003619782.1 | 78.994 | 338 | 7 | 3 | 3 | 276 | 2 | 339 | 2.20e-175 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0894680 | sp|Q8LEB2|ADHL6_ARATH | 62.682 | 343 | 61 | 4 | 1 | 276 | 1 | 343 | 2.49e-142 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0894680 | G7KPC5 | 78.994 | 338 | 7 | 3 | 3 | 276 | 2 | 339 | 1.05e-175 | 498 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032020 | Msa0894680 | 0.800130 | 1.665083e-48 | -8.615850e-47 |
| Msa0040790 | Msa0894680 | 0.804849 | 1.772746e-49 | -8.615850e-47 |
| Msa0687580 | Msa0894680 | 0.809503 | 1.832114e-50 | -8.615850e-47 |
| Msa0209140 | Msa0894680 | 0.803633 | 3.176018e-49 | -8.615850e-47 |
| Msa0372930 | Msa0894680 | 0.808215 | 3.455711e-50 | -8.615850e-47 |
| Msa0430230 | Msa0894680 | 0.810355 | 1.201137e-50 | -8.615850e-47 |
| Msa0288620 | Msa0894680 | 0.829013 | 6.527304e-55 | -8.615850e-47 |
| Msa0326710 | Msa0894680 | 0.813982 | 1.942651e-51 | -8.615850e-47 |
| Msa0519760 | Msa0894680 | 0.815213 | 1.037190e-51 | -8.615850e-47 |
| Msa0519810 | Msa0894680 | 0.812381 | 4.363399e-51 | -8.615850e-47 |
| Msa0519840 | Msa0894680 | 0.815047 | 1.129236e-51 | -8.615850e-47 |
| Msa0894680 | Msa0960420 | 0.825608 | 4.272953e-54 | -8.615850e-47 |
| Msa0894680 | Msa1165090 | 0.806264 | 8.950040e-50 | -8.615850e-47 |
| Msa0894680 | Msa1365820 | 0.807431 | 5.071238e-50 | -8.615850e-47 |
| Msa0894680 | Msa1427110 | 0.817862 | 2.646203e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0894680 | MtrunA17_Chr6g0478081 | 78.994 | 338 | 7 | 3 | 3 | 276 | 2 | 339 | 2.02e-179 | 498 |
| Msa0894680 | MtrunA17_Chr3g0125911 | 45.723 | 339 | 116 | 4 | 4 | 274 | 2 | 340 | 2.79e-96 | 288 |
| Msa0894680 | MtrunA17_Chr3g0125961 | 44.543 | 339 | 120 | 4 | 4 | 274 | 2 | 340 | 6.38e-95 | 284 |
| Msa0894680 | MtrunA17_Chr3g0125941 | 44.706 | 340 | 120 | 4 | 3 | 274 | 2 | 341 | 2.37e-94 | 283 |
| Msa0894680 | MtrunA17_Chr1g0183131 | 45.536 | 336 | 115 | 4 | 9 | 276 | 6 | 341 | 3.34e-94 | 282 |
| Msa0894680 | MtrunA17_Chr7g0262421 | 45.029 | 342 | 120 | 4 | 3 | 276 | 2 | 343 | 5.73e-94 | 282 |
| Msa0894680 | MtrunA17_Chr5g0440521 | 42.609 | 345 | 128 | 5 | 2 | 276 | 9 | 353 | 1.17e-80 | 248 |
| Msa0894680 | MtrunA17_Chr3g0118441 | 40.230 | 348 | 136 | 6 | 1 | 276 | 1 | 348 | 3.54e-76 | 236 |
| Msa0894680 | MtrunA17_Chr7g0242291 | 42.012 | 338 | 124 | 6 | 4 | 269 | 13 | 350 | 5.01e-76 | 236 |
| Msa0894680 | MtrunA17_Chr3g0132351 | 45.562 | 338 | 112 | 5 | 11 | 276 | 16 | 353 | 5.27e-75 | 234 |
| Msa0894680 | MtrunA17_Chr5g0419681 | 37.278 | 338 | 145 | 5 | 5 | 276 | 2 | 338 | 2.18e-66 | 211 |
| Msa0894680 | MtrunA17_Chr4g0021211 | 36.336 | 333 | 146 | 4 | 5 | 272 | 27 | 358 | 2.21e-65 | 209 |
| Msa0894680 | MtrunA17_Chr7g0242301 | 42.553 | 282 | 123 | 6 | 27 | 269 | 1 | 282 | 5.92e-61 | 196 |
| Msa0894680 | MtrunA17_Chr3g0118431 | 40.000 | 245 | 103 | 3 | 76 | 276 | 18 | 262 | 2.50e-54 | 177 |
| Msa0894680 | MtrunA17_Chr8g0385221 | 33.158 | 190 | 117 | 7 | 68 | 250 | 136 | 322 | 2.12e-20 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0894680 | AT5G24760.1 | 62.682 | 343 | 61 | 4 | 1 | 276 | 1 | 343 | 2.53e-143 | 407 |
| Msa0894680 | AT5G24760.2 | 62.102 | 314 | 55 | 3 | 27 | 276 | 1 | 314 | 3.11e-130 | 373 |
| Msa0894680 | AT5G24760.3 | 62.102 | 314 | 55 | 3 | 27 | 276 | 1 | 314 | 3.11e-130 | 373 |
| Msa0894680 | AT5G24760.4 | 63.319 | 229 | 43 | 1 | 89 | 276 | 1 | 229 | 6.88e-100 | 293 |
| Msa0894680 | AT1G77120.1 | 47.214 | 341 | 110 | 5 | 5 | 276 | 2 | 341 | 1.10e-99 | 296 |
| Msa0894680 | AT5G43940.1 | 45.833 | 336 | 114 | 4 | 9 | 276 | 6 | 341 | 4.00e-93 | 280 |
| Msa0894680 | AT5G43940.2 | 43.966 | 348 | 115 | 5 | 9 | 276 | 6 | 353 | 4.23e-89 | 270 |
| Msa0894680 | AT1G64710.1 | 43.881 | 335 | 117 | 5 | 9 | 272 | 6 | 340 | 4.11e-88 | 267 |
| Msa0894680 | AT5G42250.1 | 41.908 | 346 | 130 | 6 | 2 | 276 | 8 | 353 | 3.91e-79 | 244 |
| Msa0894680 | AT1G32780.1 | 38.596 | 342 | 132 | 5 | 9 | 272 | 7 | 348 | 1.60e-78 | 243 |
| Msa0894680 | AT1G64710.2 | 41.325 | 317 | 115 | 5 | 27 | 272 | 1 | 317 | 2.66e-76 | 236 |
| Msa0894680 | AT4G22110.2 | 42.941 | 340 | 117 | 6 | 11 | 276 | 15 | 351 | 4.01e-76 | 237 |
| Msa0894680 | AT4G22110.1 | 42.941 | 340 | 117 | 6 | 11 | 276 | 15 | 351 | 4.01e-76 | 237 |
| Msa0894680 | AT1G22430.2 | 41.834 | 349 | 122 | 7 | 4 | 276 | 7 | 350 | 1.81e-75 | 235 |
| Msa0894680 | AT1G22430.1 | 41.834 | 349 | 122 | 7 | 4 | 276 | 7 | 350 | 1.81e-75 | 235 |
| Msa0894680 | AT1G22440.1 | 42.941 | 340 | 117 | 6 | 11 | 276 | 12 | 348 | 2.78e-75 | 234 |
| Msa0894680 | AT1G22430.3 | 46.619 | 281 | 110 | 6 | 4 | 249 | 7 | 282 | 1.86e-72 | 225 |
| Msa0894680 | AT1G64710.3 | 43.609 | 266 | 103 | 4 | 54 | 272 | 6 | 271 | 1.74e-68 | 214 |
| Msa0894680 | AT4G22110.3 | 47.561 | 246 | 94 | 4 | 11 | 224 | 15 | 257 | 1.87e-65 | 206 |
| Msa0894680 | AT1G22430.4 | 46.275 | 255 | 98 | 5 | 4 | 224 | 7 | 256 | 2.72e-65 | 206 |
| Msa0894680 | AT1G22430.5 | 46.275 | 255 | 98 | 5 | 4 | 224 | 7 | 256 | 2.72e-65 | 206 |
| Msa0894680 | AT5G63620.2 | 28.676 | 272 | 155 | 10 | 14 | 250 | 57 | 324 | 5.01e-19 | 86.7 |
| Msa0894680 | AT5G63620.1 | 28.676 | 272 | 155 | 10 | 14 | 250 | 57 | 324 | 6.07e-19 | 86.3 |
| Msa0894680 | AT5G63620.3 | 27.843 | 255 | 146 | 9 | 14 | 234 | 57 | 307 | 3.44e-17 | 80.5 |
Find 83 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGACAAGATTTACAGTAAA+AGG | 0.163487 | 6_1:-81095158 | Msa0894680:CDS |
| AACTAATATTTGTCAAGTTT+TGG | 0.171217 | 6_1:-81095216 | Msa0894680:CDS |
| ACCATTGGAGATTAGGATTA+AGG | 0.205928 | 6_1:-81096717 | Msa0894680:CDS |
| CTGACAGGAAGAACTTTAAA+AGG | 0.257915 | 6_1:-81093734 | Msa0894680:intron |
| TACCACACAGCTAAATCTTT+TGG | 0.263883 | 6_1:-81094232 | Msa0894680:intron |
| GGATCCACAGTGGTTATATT+TGG | 0.292524 | 6_1:-81094636 | Msa0894680:CDS |
| AGGGGTGCATCTAGAATAAT+TGG | 0.320329 | 6_1:-81094384 | Msa0894680:CDS |
| AATCCACAGAAGTGTGAAAA+TGG | 0.320595 | 6_1:-81094351 | Msa0894680:intron |
| GAATACACAGTTGTTCATTC+TGG | 0.335258 | 6_1:-81095095 | Msa0894680:CDS |
| GTAACTGCACTCACCTTTGC+AGG | 0.338127 | 6_1:+81096905 | None:intergenic |
| CTCCTCAACCATTGGAGATT+AGG | 0.340698 | 6_1:-81096724 | Msa0894680:CDS |
| TCTAGATGCACCCCTTAGTT+TGG | 0.343778 | 6_1:+81094392 | None:intergenic |
| ACTTTAAAAGGATCTTTATT+CGG | 0.356032 | 6_1:-81093722 | Msa0894680:CDS |
| TCATGCAGGCTGTGCAAATC+AGG | 0.386476 | 6_1:-81095242 | Msa0894680:intron |
| GGCATTGGTGATGGAGGAAG+TGG | 0.403806 | 6_1:-81096756 | Msa0894680:CDS |
| CTTAGCTGTGGGGTTTCTGC+AGG | 0.404405 | 6_1:-81095023 | Msa0894680:intron |
| TTGCACAAGGGGCCAAACTA+AGG | 0.405871 | 6_1:-81094404 | Msa0894680:CDS |
| ATATTTGGTCTTGGAACTGT+TGG | 0.421795 | 6_1:-81094621 | Msa0894680:CDS |
| CTTTGCAGGTTATGACTTGA+GGG | 0.422926 | 6_1:+81096919 | None:intergenic |
| ACACCGCAATAATGATAAAC+AGG | 0.427206 | 6_1:+81095131 | None:intergenic |
| CCTTTGCAGGTTATGACTTG+AGG | 0.431283 | 6_1:+81096918 | None:intergenic |
| ACAGTGGTTATATTTGGTCT+TGG | 0.438849 | 6_1:-81094630 | Msa0894680:CDS |
| GCTGCAGTAGCATGGGGAGC+TGG | 0.479502 | 6_1:-81096782 | Msa0894680:CDS |
| AGCTGGAGAGGCATTGGTGA+TGG | 0.483911 | 6_1:-81096765 | Msa0894680:CDS |
| AGACAAGATTTACAGTAAAA+GGG | 0.484730 | 6_1:-81095157 | Msa0894680:CDS |
| AAGGATCTTTATTCGGAGGA+TGG | 0.488243 | 6_1:-81093715 | Msa0894680:CDS |
| ATGGGGAGCTGGAGAGGCAT+TGG | 0.489033 | 6_1:-81096771 | Msa0894680:CDS |
| TTGGTAGTAGTGGTGGTGGT+AGG | 0.489094 | 6_1:+81097039 | None:intergenic |
| AAATATGCATTCTTAGCTGT+GGG | 0.493066 | 6_1:-81095034 | Msa0894680:CDS |
| GTTGTTGTTGTTGGTAGTAG+TGG | 0.498583 | 6_1:+81097029 | None:intergenic |
| ACAAACAGCTGCAGTAGCAT+GGG | 0.502030 | 6_1:-81096789 | Msa0894680:intron |
| GCAGGATTGTTGAGAGCGTA+GGG | 0.505817 | 6_1:-81095328 | Msa0894680:intron |
| TGCAGGATTGTTGAGAGCGT+AGG | 0.508503 | 6_1:-81095329 | Msa0894680:intron |
| ATTGTTGAGAGCGTAGGGCT+AGG | 0.509736 | 6_1:-81095323 | Msa0894680:CDS |
| ATCCTAATCTCCAATGGTTG+AGG | 0.520022 | 6_1:+81096722 | None:intergenic |
| AGTCAGTCCTCCTCAACCAT+TGG | 0.520494 | 6_1:-81096732 | Msa0894680:CDS |
| TGCACAAGGGGCCAAACTAA+GGG | 0.521604 | 6_1:-81094403 | Msa0894680:CDS |
| AACAAACAGCTGCAGTAGCA+TGG | 0.525473 | 6_1:-81096790 | Msa0894680:intron |
| GAATAATCGACCTGCACGAT+AGG | 0.525925 | 6_1:+81094172 | None:intergenic |
| ATTAAGTGCATTACTGATGG+TGG | 0.526528 | 6_1:-81094058 | Msa0894680:CDS |
| CCTCCATTGGTAGTGGTAGG+TGG | 0.534893 | 6_1:+81097064 | None:intergenic |
| ACATACTTCTCTACTAATGA+AGG | 0.534955 | 6_1:+81093674 | None:intergenic |
| GTAGGTTCCTCCATTGGTAG+TGG | 0.536386 | 6_1:+81097057 | None:intergenic |
| GGAGTGACTGAATTCAAAGA+AGG | 0.538722 | 6_1:-81095302 | Msa0894680:CDS |
| TTAAGTGCATTACTGATGGT+GGG | 0.539038 | 6_1:-81094057 | Msa0894680:CDS |
| GTGGTGGTAGGTTCCTCCAT+TGG | 0.540735 | 6_1:+81097051 | None:intergenic |
| TTAAAAGGATCTTTATTCGG+AGG | 0.548166 | 6_1:-81093719 | Msa0894680:CDS |
| GTTATTAAGTGCATTACTGA+TGG | 0.552179 | 6_1:-81094061 | Msa0894680:CDS |
| AAAATATGCATTCTTAGCTG+TGG | 0.552327 | 6_1:-81095035 | Msa0894680:CDS |
| GTTGTTGTTGGTAGTAGTGG+TGG | 0.567116 | 6_1:+81097032 | None:intergenic |
| GTTGTTGGTAGTAGTGGTGG+TGG | 0.567554 | 6_1:+81097035 | None:intergenic |
| TGATGATGATGATGCCATGT+TGG | 0.567798 | 6_1:+81096944 | None:intergenic |
| CCTATTCAATAGGTTGCACA+AGG | 0.568491 | 6_1:-81094417 | Msa0894680:intron |
| GAGTGACTGAATTCAAAGAA+GGG | 0.576891 | 6_1:-81095301 | Msa0894680:CDS |
| GTACAAAGAACCTATCGTGC+AGG | 0.585896 | 6_1:-81094182 | Msa0894680:intron |
| AGTAGCATGGGGAGCTGGAG+AGG | 0.586768 | 6_1:-81096777 | Msa0894680:CDS |
| TGGAGAGGCATTGGTGATGG+AGG | 0.587850 | 6_1:-81096762 | Msa0894680:CDS |
| TAAGTGCATTACTGATGGTG+GGG | 0.591863 | 6_1:-81094056 | Msa0894680:CDS |
| AAGATCACTACGACAGAGAG+AGG | 0.592841 | 6_1:+81096685 | None:intergenic |
| AAGCCTGTTTATCATTATTG+CGG | 0.594521 | 6_1:-81095134 | Msa0894680:CDS |
| GTTCCTCCATTGGTAGTGGT+AGG | 0.595290 | 6_1:+81097061 | None:intergenic |
| CCTCAAGTCATAACCTGCAA+AGG | 0.598781 | 6_1:-81096918 | Msa0894680:intron |
| ACCTTAATCCTAATCTCCAA+TGG | 0.599263 | 6_1:+81096716 | None:intergenic |
| AATGTTGCCGATGTGACAAA+AGG | 0.599429 | 6_1:-81094657 | Msa0894680:CDS |
| ATAGGTTCTTTGTACAAACT+CGG | 0.599694 | 6_1:+81094190 | None:intergenic |
| CTAATCTCCAATGGTTGAGG+AGG | 0.600166 | 6_1:+81096725 | None:intergenic |
| CAATAGGTCTAGGTGCAGCA+TGG | 0.604039 | 6_1:-81094680 | Msa0894680:intron |
| CTATGAAAACTGTTAACACA+TGG | 0.605315 | 6_1:+81095276 | None:intergenic |
| TCTCCACCTACCACTACCAA+TGG | 0.605753 | 6_1:-81097067 | Msa0894680:five_prime_UTR |
| TATTTGGTCATGAAGCATCT+GGG | 0.605814 | 6_1:-81096013 | Msa0894680:intron |
| TATTCAATAGGTTGCACAAG+GGG | 0.615252 | 6_1:-81094415 | Msa0894680:intron |
| TTTGCAGGTTATGACTTGAG+GGG | 0.626967 | 6_1:+81096920 | None:intergenic |
| CCACCTACCACTACCAATGG+AGG | 0.630369 | 6_1:-81097064 | Msa0894680:five_prime_UTR |
| GCACAAGGGGCCAAACTAAG+GGG | 0.646651 | 6_1:-81094402 | Msa0894680:CDS |
| AGTAGAGAAGTATGTCAACA+AGG | 0.658436 | 6_1:-81093666 | None:intergenic |
| TTAGACAGAAACAGCCAACA+TGG | 0.659200 | 6_1:-81096958 | Msa0894680:exon |
| AGTGACTGAATTCAAAGAAG+GGG | 0.664041 | 6_1:-81095300 | Msa0894680:CDS |
| AATATGCATTCTTAGCTGTG+GGG | 0.673736 | 6_1:-81095033 | Msa0894680:CDS |
| ATCACTACGACAGAGAGAGG+TGG | 0.675928 | 6_1:+81096688 | None:intergenic |
| CAAACAGCTGCAGTAGCATG+GGG | 0.680428 | 6_1:-81096788 | Msa0894680:intron |
| CTATTCAATAGGTTGCACAA+GGG | 0.695720 | 6_1:-81094416 | Msa0894680:intron |
| AAGACCAAATATAACCACTG+TGG | 0.739475 | 6_1:+81094632 | None:intergenic |
| TGTGACAAAAGGATCCACAG+TGG | 0.822984 | 6_1:-81094646 | Msa0894680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTGTTATAAAAGAATA+CGG | - | chr6_1:81094190-81094209 | Msa0894680:CDS | 15.0% |
| !! | GACATTAGAAATAATAAAAT+AGG | + | chr6_1:81094329-81094348 | None:intergenic | 15.0% |
| !!! | TTTTATTATTTCTAATGTCA+TGG | - | chr6_1:81094330-81094349 | Msa0894680:intron | 15.0% |
| !!! | ATTTTATTTGACATGATTAA+TGG | - | chr6_1:81094480-81094499 | Msa0894680:intron | 15.0% |
| !! | TATTATCAATGTTAACATTT+CGG | - | chr6_1:81094601-81094620 | Msa0894680:intron | 15.0% |
| !! | TATAGTTAATAATAAACACT+TGG | + | chr6_1:81095757-81095776 | None:intergenic | 15.0% |
| !! | AAAATAAATTCAGAGTAATT+TGG | + | chr6_1:81096436-81096455 | None:intergenic | 15.0% |
| !!! | TTTATTTTTAAACCTTAGAA+CGG | - | chr6_1:81096448-81096467 | Msa0894680:intron | 15.0% |
| !! | AAGATAAAGAAAATACCAAA+AGG | + | chr6_1:81093871-81093890 | None:intergenic | 20.0% |
| !! | TTTGTTTGTTTCATAAACAA+TGG | + | chr6_1:81093941-81093960 | None:intergenic | 20.0% |
| !!! | GTTTAATTTTGATACATTGT+CGG | + | chr6_1:81094270-81094289 | None:intergenic | 20.0% |
| !! | ATAGGAGAAAAAAAGTAAAA+AGG | + | chr6_1:81094311-81094330 | None:intergenic | 20.0% |
| !! | ATGTCAAATAAAATGTTGAT+TGG | + | chr6_1:81094474-81094493 | None:intergenic | 20.0% |
| !! | TCAATACTTCATAGATTATA+TGG | - | chr6_1:81094650-81094669 | Msa0894680:CDS | 20.0% |
| !! | TTTAACCAAATTATTGCAAA+AGG | - | chr6_1:81095351-81095370 | Msa0894680:intron | 20.0% |
| !!! | AACTAATATTTGTCAAGTTT+TGG | - | chr6_1:81095529-81095548 | Msa0894680:intron | 20.0% |
| !!! | ACTAATATTTGTCAAGTTTT+GGG | - | chr6_1:81095530-81095549 | Msa0894680:intron | 20.0% |
| !! | CTATAAGAAATTGAAACATA+AGG | - | chr6_1:81095772-81095791 | Msa0894680:intron | 20.0% |
| !! | AAATTGAAACATAAGGTTTA+AGG | - | chr6_1:81095779-81095798 | Msa0894680:intron | 20.0% |
| !!! | TACTAGTTAGTTATTTTCAA+GGG | - | chr6_1:81095941-81095960 | Msa0894680:intron | 20.0% |
| !! | AGAATATAAGATAGATATAG+TGG | + | chr6_1:81096175-81096194 | None:intergenic | 20.0% |
| !!! | ACTTTAAAAGGATCTTTATT+CGG | - | chr6_1:81097023-81097042 | Msa0894680:five_prime_UTR | 20.0% |
| !! | TAAATTGTTGTTGTTGTTGT+TGG | + | chr6_1:81093728-81093747 | None:intergenic | 25.0% |
| ! | TATTCAATTACATCTCACAA+AGG | + | chr6_1:81094410-81094429 | None:intergenic | 25.0% |
| ! | AGAAACTAACATCTAACATA+AGG | - | chr6_1:81094678-81094697 | Msa0894680:intron | 25.0% |
| ! | AAATAATCCAACAATAGAAC+AGG | + | chr6_1:81094770-81094789 | None:intergenic | 25.0% |
| ! | TCTTCAAACAAAATAACCAA+CGG | + | chr6_1:81094814-81094833 | None:intergenic | 25.0% |
| !! | TCATTTTAAACTCGGTAAAT+CGG | + | chr6_1:81095032-81095051 | None:intergenic | 25.0% |
| !! | GATGATTCTCATTTTAAACT+CGG | + | chr6_1:81095040-81095059 | None:intergenic | 25.0% |
| ! | TTATGTATATGCATGAGAAT+GGG | - | chr6_1:81095190-81095209 | Msa0894680:CDS | 25.0% |
| ! | AATTATATTGTGAACCTTGA+TGG | + | chr6_1:81095305-81095324 | None:intergenic | 25.0% |
| !! | TTACACCTTTTGCAATAATT+TGG | + | chr6_1:81095359-81095378 | None:intergenic | 25.0% |
| ! | ACTATATTCAACATCTACTA+TGG | + | chr6_1:81095386-81095405 | None:intergenic | 25.0% |
| ! | AGATGTTGAATATAGTGTAA+TGG | - | chr6_1:81095390-81095409 | Msa0894680:intron | 25.0% |
| ! | AAGACAAGATTTACAGTAAA+AGG | - | chr6_1:81095587-81095606 | Msa0894680:intron | 25.0% |
| ! | AGACAAGATTTACAGTAAAA+GGG | - | chr6_1:81095588-81095607 | Msa0894680:intron | 25.0% |
| ! | AATAACTAACTAGTACTAGA+AGG | + | chr6_1:81095936-81095955 | None:intergenic | 25.0% |
| !!! | GTACTAGTTAGTTATTTTCA+AGG | - | chr6_1:81095940-81095959 | Msa0894680:intron | 25.0% |
| !!! | CTCAAAGTTTTGTTTCTAAA+TGG | - | chr6_1:81095971-81095990 | Msa0894680:intron | 25.0% |
| ! | CAACTTTGCATTATAACAAT+AGG | - | chr6_1:81096049-81096068 | Msa0894680:intron | 25.0% |
| !! | TAATTTTCTTTTTGCTCTTG+AGG | - | chr6_1:81096253-81096272 | Msa0894680:intron | 25.0% |
| ! | ATTCATCTATTAAGATCATG+AGG | + | chr6_1:81096280-81096299 | None:intergenic | 25.0% |
| !! | TGAAATTTTCAACACACAAA+TGG | + | chr6_1:81096663-81096682 | None:intergenic | 25.0% |
| ! | ATTTGTGTGTTGAAAATTTC+AGG | - | chr6_1:81096662-81096681 | Msa0894680:intron | 25.0% |
| ! | TATAACAAAACATGACTTGA+GGG | + | chr6_1:81096797-81096816 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr6_1:81096874-81096893 | Msa0894680:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr6_1:81096875-81096894 | Msa0894680:intron | 25.0% |
| TGTCTATAGGAACAACTAAT+TGG | + | chr6_1:81094360-81094379 | None:intergenic | 30.0% | |
| AAAGGACTAATTCTTGTATG+AGG | + | chr6_1:81094392-81094411 | None:intergenic | 30.0% | |
| ACATGATTAATGGTTACCTA+TGG | - | chr6_1:81094490-81094509 | Msa0894680:intron | 30.0% | |
| !! | CATAAGGTGTTTTTATATGC+AGG | - | chr6_1:81094694-81094713 | Msa0894680:intron | 30.0% |
| CACTACAATAGATGAATCAT+TGG | - | chr6_1:81094977-81094996 | Msa0894680:intron | 30.0% | |
| GTTATGTATATGCATGAGAA+TGG | - | chr6_1:81095189-81095208 | Msa0894680:CDS | 30.0% | |
| !! | ATATAGTGTAATGGTTTTGC+AGG | - | chr6_1:81095399-81095418 | Msa0894680:intron | 30.0% |
| CTATGAAAACTGTTAACACA+TGG | + | chr6_1:81095472-81095491 | None:intergenic | 30.0% | |
| ! | CATGTGTTAACAGTTTTCAT+AGG | - | chr6_1:81095470-81095489 | Msa0894680:intron | 30.0% |
| !!! | TATTTGTCAAGTTTTGGGAT+TGG | - | chr6_1:81095535-81095554 | Msa0894680:intron | 30.0% |
| AAGCCTGTTTATCATTATTG+CGG | - | chr6_1:81095611-81095630 | Msa0894680:intron | 30.0% | |
| ! | AGAATGCATATTTTCTCAAG+AGG | + | chr6_1:81095704-81095723 | None:intergenic | 30.0% |
| AAAATATGCATTCTTAGCTG+TGG | - | chr6_1:81095710-81095729 | Msa0894680:intron | 30.0% | |
| AAATATGCATTCTTAGCTGT+GGG | - | chr6_1:81095711-81095730 | Msa0894680:intron | 30.0% | |
| !!! | AGTTTTGTTTCTAAATGGAC+AGG | - | chr6_1:81095976-81095995 | Msa0894680:intron | 30.0% |
| TGCATTATAACAATAGGTCT+AGG | - | chr6_1:81096055-81096074 | Msa0894680:intron | 30.0% | |
| ATAGGTTCTTTGTACAAACT+CGG | + | chr6_1:81096558-81096577 | None:intergenic | 30.0% | |
| GTTATTAAGTGCATTACTGA+TGG | - | chr6_1:81096684-81096703 | Msa0894680:intron | 30.0% | |
| CTATAACAAAACATGACTTG+AGG | + | chr6_1:81096798-81096817 | None:intergenic | 30.0% | |
| ! | TATCTTTCCTTGTTTACAAC+AGG | - | chr6_1:81096917-81096936 | Msa0894680:intron | 30.0% |
| ! | ATCTTTCCTTGTTTACAACA+GGG | - | chr6_1:81096918-81096937 | Msa0894680:intron | 30.0% |
| TTAAAAGGATCTTTATTCGG+AGG | - | chr6_1:81097026-81097045 | Msa0894680:five_prime_UTR | 30.0% | |
| ! | AATGAAGGAAGATCAGTTTT+AGG | + | chr6_1:81097059-81097078 | None:intergenic | 30.0% |
| ACATACTTCTCTACTAATGA+AGG | + | chr6_1:81097074-81097093 | None:intergenic | 30.0% | |
| ! | GTGCAGTTACTATTTCCTTT+TGG | - | chr6_1:81093853-81093872 | Msa0894680:intron | 35.0% |
| ACCATTGGAGATTAGGATTA+AGG | - | chr6_1:81094028-81094047 | Msa0894680:intron | 35.0% | |
| ACCTTAATCCTAATCTCCAA+TGG | + | chr6_1:81094032-81094051 | None:intergenic | 35.0% | |
| ACTAATTCTTGTATGAGGAC+TGG | + | chr6_1:81094387-81094406 | None:intergenic | 35.0% | |
| CATATGTATTGTCATCGTGT+CGG | + | chr6_1:81094551-81094570 | None:intergenic | 35.0% | |
| ACCAAATATGCGAGGAAATA+TGG | + | chr6_1:81094720-81094739 | None:intergenic | 35.0% | |
| ! | ATATTTGGTCATGAAGCATC+TGG | - | chr6_1:81094731-81094750 | Msa0894680:intron | 35.0% |
| ! | TATTTGGTCATGAAGCATCT+GGG | - | chr6_1:81094732-81094751 | Msa0894680:intron | 35.0% |
| TACACTTCCTGTTCTATTGT+TGG | - | chr6_1:81094760-81094779 | Msa0894680:intron | 35.0% | |
| TCGGTAAATCGGATTTCAAA+CGG | + | chr6_1:81095021-81095040 | None:intergenic | 35.0% | |
| CAATCCAGGTCCATAAAAAA+TGG | - | chr6_1:81095122-81095141 | Msa0894680:CDS | 35.0% | |
| CAGGTCCATAAAAAATGGTA+GGG | - | chr6_1:81095127-81095146 | Msa0894680:CDS | 35.0% | |
| AATTTACAGCTATGGCTAGT+TGG | + | chr6_1:81095226-81095245 | None:intergenic | 35.0% | |
| ! | TTGATGGTACAGCAAAATAC+AGG | + | chr6_1:81095289-81095308 | None:intergenic | 35.0% |
| !! | TGTATTTTGCTGTACCATCA+AGG | - | chr6_1:81095288-81095307 | Msa0894680:CDS | 35.0% |
| AGTCATGTCTATGTGAATTG+CGG | + | chr6_1:81095332-81095351 | None:intergenic | 35.0% | |
| GAGTGACTGAATTCAAAGAA+GGG | - | chr6_1:81095444-81095463 | Msa0894680:intron | 35.0% | |
| AGTGACTGAATTCAAAGAAG+GGG | - | chr6_1:81095445-81095464 | Msa0894680:intron | 35.0% | |
| !!! | AGTTTTGGGATTGGAAAGAA+AGG | - | chr6_1:81095544-81095563 | Msa0894680:intron | 35.0% |
| !!! | GTTTTGGGATTGGAAAGAAA+GGG | - | chr6_1:81095545-81095564 | Msa0894680:intron | 35.0% |
| ACACCGCAATAATGATAAAC+AGG | + | chr6_1:81095617-81095636 | None:intergenic | 35.0% | |
| GAATACACAGTTGTTCATTC+TGG | - | chr6_1:81095650-81095669 | Msa0894680:intron | 35.0% | |
| !! | ATTTTCTCAAGAGGTACATG+AGG | + | chr6_1:81095695-81095714 | None:intergenic | 35.0% |
| AATATGCATTCTTAGCTGTG+GGG | - | chr6_1:81095712-81095731 | Msa0894680:intron | 35.0% | |
| ACATAAAGTGACACTCAGTA+TGG | + | chr6_1:81095826-81095845 | None:intergenic | 35.0% | |
| ATTACTCAGAAGTAGTCCTA+CGG | + | chr6_1:81095867-81095886 | None:intergenic | 35.0% | |
| AACTAACTAGTACTAGAAGG+TGG | + | chr6_1:81095933-81095952 | None:intergenic | 35.0% | |
| AAGACCAAATATAACCACTG+TGG | + | chr6_1:81096116-81096135 | None:intergenic | 35.0% | |
| ACAGTGGTTATATTTGGTCT+TGG | - | chr6_1:81096115-81096134 | Msa0894680:intron | 35.0% | |
| !! | ATATTTGGTCTTGGAACTGT+TGG | - | chr6_1:81096124-81096143 | Msa0894680:intron | 35.0% |
| TTTCTGTAAGTCCAAGTACT+CGG | - | chr6_1:81096149-81096168 | Msa0894680:intron | 35.0% | |
| ! | GAATTCTCTTTGTGCTTTTG+CGG | + | chr6_1:81096206-81096225 | None:intergenic | 35.0% |
| TGAATAGGAGAGTCATGATT+TGG | + | chr6_1:81096316-81096335 | None:intergenic | 35.0% | |
| TCATGACTCTCCTATTCAAT+AGG | - | chr6_1:81096318-81096337 | Msa0894680:intron | 35.0% | |
| CTATTCAATAGGTTGCACAA+GGG | - | chr6_1:81096329-81096348 | Msa0894680:intron | 35.0% | |
| TATTCAATAGGTTGCACAAG+GGG | - | chr6_1:81096330-81096349 | Msa0894680:intron | 35.0% | |
| ! | AATCCACAGAAGTGTGAAAA+TGG | - | chr6_1:81096394-81096413 | Msa0894680:intron | 35.0% |
| ! | TTACCATTTTCACACTTCTG+TGG | + | chr6_1:81096400-81096419 | None:intergenic | 35.0% |
| ! | TACCACACAGCTAAATCTTT+TGG | - | chr6_1:81096513-81096532 | Msa0894680:intron | 35.0% |
| ! | ACCACACAGCTAAATCTTTT+GGG | - | chr6_1:81096514-81096533 | Msa0894680:intron | 35.0% |
| TGCAATTGTGCATGTGAAAT+TGG | + | chr6_1:81096616-81096635 | None:intergenic | 35.0% | |
| ATTAAGTGCATTACTGATGG+TGG | - | chr6_1:81096687-81096706 | Msa0894680:intron | 35.0% | |
| TTAAGTGCATTACTGATGGT+GGG | - | chr6_1:81096688-81096707 | Msa0894680:intron | 35.0% | |
| !! | GATTTCTGTTTTGAATGTGC+AGG | - | chr6_1:81096714-81096733 | Msa0894680:CDS | 35.0% |
| ! | TCTTTCCTTGTTTACAACAG+GGG | - | chr6_1:81096919-81096938 | Msa0894680:CDS | 35.0% |
| !!! | CTTTTAAAGTTCTTCCTGTC+AGG | + | chr6_1:81097013-81097032 | None:intergenic | 35.0% |
| CTGACAGGAAGAACTTTAAA+AGG | - | chr6_1:81097011-81097030 | Msa0894680:five_prime_UTR | 35.0% | |
| !! | GTTGTTGTTGTTGGTAGTAG+TGG | + | chr6_1:81093719-81093738 | None:intergenic | 40.0% |
| TTAGACAGAAACAGCCAACA+TGG | - | chr6_1:81093787-81093806 | Msa0894680:intron | 40.0% | |
| ! | TGATGATGATGATGCCATGT+TGG | + | chr6_1:81093804-81093823 | None:intergenic | 40.0% |
| TTTGCAGGTTATGACTTGAG+GGG | + | chr6_1:81093828-81093847 | None:intergenic | 40.0% | |
| CTTTGCAGGTTATGACTTGA+GGG | + | chr6_1:81093829-81093848 | None:intergenic | 40.0% | |
| ATCCTAATCTCCAATGGTTG+AGG | + | chr6_1:81094026-81094045 | None:intergenic | 40.0% | |
| TCGTAGTGATCTTTCTGCTT+GGG | - | chr6_1:81094070-81094089 | Msa0894680:intron | 40.0% | |
| GCCATATTTCCTCGCATATT+TGG | - | chr6_1:81094716-81094735 | Msa0894680:intron | 40.0% | |
| ! | ATGTGTCATTAGTGATCCGT+TGG | - | chr6_1:81094795-81094814 | Msa0894680:intron | 40.0% |
| AGAGTGACAGTGATCAACTA+CGG | - | chr6_1:81094924-81094943 | Msa0894680:intron | 40.0% | |
| !!! | TGTGTGATATTTTGACCGCA+AGG | + | chr6_1:81094959-81094978 | None:intergenic | 40.0% |
| CGGTAAATCGGATTTCAAAC+GGG | + | chr6_1:81095020-81095039 | None:intergenic | 40.0% | |
| ATTTACTGCAGATAGTAGGC+TGG | + | chr6_1:81095081-81095100 | None:intergenic | 40.0% | |
| ACGCATTTACTGCAGATAGT+AGG | + | chr6_1:81095085-81095104 | None:intergenic | 40.0% | |
| ATGCGTGATACTATGACTGA+AGG | - | chr6_1:81095099-81095118 | Msa0894680:CDS | 40.0% | |
| !!! | CCTACCATTTTTTATGGACC+TGG | + | chr6_1:81095129-81095148 | None:intergenic | 40.0% |
| CCAGGTCCATAAAAAATGGT+AGG | - | chr6_1:81095126-81095145 | Msa0894680:CDS | 40.0% | |
| !!! | CTGCACCCTACCATTTTTTA+TGG | + | chr6_1:81095135-81095154 | None:intergenic | 40.0% |
| CTAGCCATAGCTGTAAATTG+CGG | - | chr6_1:81095227-81095246 | Msa0894680:CDS | 40.0% | |
| GGAGTGACTGAATTCAAAGA+AGG | - | chr6_1:81095443-81095462 | Msa0894680:intron | 40.0% | |
| AGTATGGACGAAGAGATTAC+TGG | + | chr6_1:81095810-81095829 | None:intergenic | 40.0% | |
| TTACTCAGAAGTAGTCCTAC+GGG | + | chr6_1:81095866-81095885 | None:intergenic | 40.0% | |
| TAACTAGTACTAGAAGGTGG+TGG | + | chr6_1:81095930-81095949 | None:intergenic | 40.0% | |
| AATGTTGCCGATGTGACAAA+AGG | - | chr6_1:81096088-81096107 | Msa0894680:intron | 40.0% | |
| ! | TGTGGATCCTTTTGTCACAT+CGG | + | chr6_1:81096098-81096117 | None:intergenic | 40.0% |
| GGATCCACAGTGGTTATATT+TGG | - | chr6_1:81096109-81096128 | Msa0894680:intron | 40.0% | |
| GAGTACTTGGACTTACAGAA+AGG | + | chr6_1:81096150-81096169 | None:intergenic | 40.0% | |
| CCTTGTGCAACCTATTGAAT+AGG | + | chr6_1:81096331-81096350 | None:intergenic | 40.0% | |
| CCTATTCAATAGGTTGCACA+AGG | - | chr6_1:81096328-81096347 | Msa0894680:intron | 40.0% | |
| ! | AGGGGTGCATCTAGAATAAT+TGG | - | chr6_1:81096361-81096380 | Msa0894680:intron | 40.0% |
| AGAGATTATGAGCCGTTCTA+AGG | + | chr6_1:81096463-81096482 | None:intergenic | 40.0% | |
| TCCCAAAAGATTTAGCTGTG+TGG | + | chr6_1:81096518-81096537 | None:intergenic | 40.0% | |
| ! | TAAGTGCATTACTGATGGTG+GGG | - | chr6_1:81096689-81096708 | Msa0894680:intron | 40.0% |
| AATTCAAGTCAGACCCTGTT+TGG | + | chr6_1:81096891-81096910 | None:intergenic | 40.0% | |
| ! | CATTATGGACTATTCCTGAC+AGG | - | chr6_1:81096996-81097015 | Msa0894680:five_prime_UTR | 40.0% |
| AAGGATCTTTATTCGGAGGA+TGG | - | chr6_1:81097030-81097049 | Msa0894680:five_prime_UTR | 40.0% | |
| !! | GTTGTTGTTGGTAGTAGTGG+TGG | + | chr6_1:81093716-81093735 | None:intergenic | 45.0% |
| CCTTTGCAGGTTATGACTTG+AGG | + | chr6_1:81093830-81093849 | None:intergenic | 45.0% | |
| CCTCAAGTCATAACCTGCAA+AGG | - | chr6_1:81093827-81093846 | Msa0894680:intron | 45.0% | |
| AACAAACAGCTGCAGTAGCA+TGG | - | chr6_1:81093955-81093974 | Msa0894680:intron | 45.0% | |
| ACAAACAGCTGCAGTAGCAT+GGG | - | chr6_1:81093956-81093975 | Msa0894680:intron | 45.0% | |
| CTAATCTCCAATGGTTGAGG+AGG | + | chr6_1:81094023-81094042 | None:intergenic | 45.0% | |
| CTCCTCAACCATTGGAGATT+AGG | - | chr6_1:81094021-81094040 | Msa0894680:intron | 45.0% | |
| AAGATCACTACGACAGAGAG+AGG | + | chr6_1:81094063-81094082 | None:intergenic | 45.0% | |
| GTCGTAGTGATCTTTCTGCT+TGG | - | chr6_1:81094069-81094088 | Msa0894680:intron | 45.0% | |
| GAGGACTGGACAATGTCTAT+AGG | + | chr6_1:81094373-81094392 | None:intergenic | 45.0% | |
| AATGGTTACCTATGGAGCAC+TGG | - | chr6_1:81094498-81094517 | Msa0894680:intron | 45.0% | |
| GCTTCATGACCAAATATGCG+AGG | + | chr6_1:81094728-81094747 | None:intergenic | 45.0% | |
| CTGTCACTCTATCTGAGCTT+TGG | + | chr6_1:81094914-81094933 | None:intergenic | 45.0% | |
| GAGTGACAGTGATCAACTAC+GGG | - | chr6_1:81094925-81094944 | Msa0894680:intron | 45.0% | |
| ACAGTGATCAACTACGGGAA+TGG | - | chr6_1:81094930-81094949 | Msa0894680:intron | 45.0% | |
| AGATAGTAGGCTGGAATCGT+TGG | + | chr6_1:81095072-81095091 | None:intergenic | 45.0% | |
| ACTATGACTGAAGGCAATCC+AGG | - | chr6_1:81095108-81095127 | Msa0894680:CDS | 45.0% | |
| CAGACCGCAATTTACAGCTA+TGG | + | chr6_1:81095234-81095253 | None:intergenic | 45.0% | |
| CAAATGCAATTGCGGCACAT+TGG | - | chr6_1:81095254-81095273 | Msa0894680:intron | 45.0% | |
| TAGGAGAATGCATGTCATGC+AGG | - | chr6_1:81095489-81095508 | Msa0894680:intron | 45.0% | |
| ! | AGTCCTACGGGTTACACAAT+GGG | + | chr6_1:81095854-81095873 | None:intergenic | 45.0% |
| ! | TAGTCCTACGGGTTACACAA+TGG | + | chr6_1:81095855-81095874 | None:intergenic | 45.0% |
| !! | AAGGTGGTGGAAATTCGCTA+TGG | + | chr6_1:81095917-81095936 | None:intergenic | 45.0% |
| TGTGACAAAAGGATCCACAG+TGG | - | chr6_1:81096099-81096118 | Msa0894680:intron | 45.0% | |
| AGATATAGTGGCCGAGTACT+TGG | + | chr6_1:81096163-81096182 | None:intergenic | 45.0% | |
| TCTAGATGCACCCCTTAGTT+TGG | + | chr6_1:81096356-81096375 | None:intergenic | 45.0% | |
| GTACAAAGAACCTATCGTGC+AGG | - | chr6_1:81096563-81096582 | Msa0894680:intron | 45.0% | |
| GAATAATCGACCTGCACGAT+AGG | + | chr6_1:81096576-81096595 | None:intergenic | 45.0% | |
| ACAGCATGATTGCAATGCAG+TGG | + | chr6_1:81096757-81096776 | None:intergenic | 45.0% | |
| ! | TTCCTTGTTTACAACAGGGG+TGG | - | chr6_1:81096922-81096941 | Msa0894680:CDS | 45.0% |
| ! | TCCTTGTTTACAACAGGGGT+GGG | - | chr6_1:81096923-81096942 | Msa0894680:CDS | 45.0% |
| !! | TGTTACACTTGGTGTGCCAA+AGG | - | chr6_1:81096953-81096972 | Msa0894680:exon | 45.0% |
| CCATAATGAGCTGACATCTC+AGG | + | chr6_1:81096984-81097003 | None:intergenic | 45.0% | |
| CCTGAGATGTCAGCTCATTA+TGG | - | chr6_1:81096981-81097000 | Msa0894680:five_prime_UTR | 45.0% | |
| TCTCCACCTACCACTACCAA+TGG | - | chr6_1:81093678-81093697 | Msa0894680:CDS | 50.0% | |
| !! | GTTCCTCCATTGGTAGTGGT+AGG | + | chr6_1:81093687-81093706 | None:intergenic | 50.0% |
| GTAGGTTCCTCCATTGGTAG+TGG | + | chr6_1:81093691-81093710 | None:intergenic | 50.0% | |
| !! | TTGGTAGTAGTGGTGGTGGT+AGG | + | chr6_1:81093709-81093728 | None:intergenic | 50.0% |
| !! | GTTGTTGGTAGTAGTGGTGG+TGG | + | chr6_1:81093713-81093732 | None:intergenic | 50.0% |
| GTAACTGCACTCACCTTTGC+AGG | + | chr6_1:81093843-81093862 | None:intergenic | 50.0% | |
| CAAACAGCTGCAGTAGCATG+GGG | - | chr6_1:81093957-81093976 | Msa0894680:intron | 50.0% | |
| AGTCAGTCCTCCTCAACCAT+TGG | - | chr6_1:81094013-81094032 | Msa0894680:intron | 50.0% | |
| ATCACTACGACAGAGAGAGG+TGG | + | chr6_1:81094060-81094079 | None:intergenic | 50.0% | |
| ! | GCACTGGCACTTCAGACTAA+AGG | - | chr6_1:81094514-81094533 | Msa0894680:intron | 50.0% |
| ! | CTACGGGAATGGATTCCTTG+CGG | - | chr6_1:81094941-81094960 | Msa0894680:intron | 50.0% |
| AGTAGGCTGGAATCGTTGGA+CGG | + | chr6_1:81095068-81095087 | None:intergenic | 50.0% | |
| GCGGTCTGCAAATGCAATTG+CGG | - | chr6_1:81095246-81095265 | Msa0894680:intron | 50.0% | |
| ! | TGCAGGATTGTTGAGAGCGT+AGG | - | chr6_1:81095416-81095435 | Msa0894680:intron | 50.0% |
| ! | GCAGGATTGTTGAGAGCGTA+GGG | - | chr6_1:81095417-81095436 | Msa0894680:intron | 50.0% |
| ! | ATTGTTGAGAGCGTAGGGCT+AGG | - | chr6_1:81095422-81095441 | Msa0894680:intron | 50.0% |
| TCATGCAGGCTGTGCAAATC+AGG | - | chr6_1:81095503-81095522 | Msa0894680:intron | 50.0% | |
| TGTCCCATTGTGTAACCCGT+AGG | - | chr6_1:81095848-81095867 | Msa0894680:intron | 50.0% | |
| GTGTGTTCTGCAGGTTTCTG+AGG | + | chr6_1:81095895-81095914 | None:intergenic | 50.0% | |
| TTCGCTATGGTGTGTTCTGC+AGG | + | chr6_1:81095904-81095923 | None:intergenic | 50.0% | |
| CAATAGGTCTAGGTGCAGCA+TGG | - | chr6_1:81096065-81096084 | Msa0894680:intron | 50.0% | |
| TTGCACAAGGGGCCAAACTA+AGG | - | chr6_1:81096341-81096360 | Msa0894680:intron | 50.0% | |
| TGCACAAGGGGCCAAACTAA+GGG | - | chr6_1:81096342-81096361 | Msa0894680:intron | 50.0% | |
| ! | CCTTGTTTACAACAGGGGTG+GGG | - | chr6_1:81096924-81096943 | Msa0894680:CDS | 50.0% |
| TGGGGCTTGACTGTTACACT+TGG | - | chr6_1:81096942-81096961 | Msa0894680:CDS | 50.0% | |
| GACATCTCAGGCTTCACCTT+TGG | + | chr6_1:81096972-81096991 | None:intergenic | 50.0% | |
| !! | CCTCCATTGGTAGTGGTAGG+TGG | + | chr6_1:81093684-81093703 | None:intergenic | 55.0% |
| CCACCTACCACTACCAATGG+AGG | - | chr6_1:81093681-81093700 | Msa0894680:CDS | 55.0% | |
| GTGGTGGTAGGTTCCTCCAT+TGG | + | chr6_1:81093697-81093716 | None:intergenic | 55.0% | |
| !! | AGCTGGAGAGGCATTGGTGA+TGG | - | chr6_1:81093980-81093999 | Msa0894680:intron | 55.0% |
| !! | TGGAGAGGCATTGGTGATGG+AGG | - | chr6_1:81093983-81094002 | Msa0894680:intron | 55.0% |
| !! | GGCATTGGTGATGGAGGAAG+TGG | - | chr6_1:81093989-81094008 | Msa0894680:intron | 55.0% |
| ! | CTGAAGTGCCAGTGCTCCAT+AGG | + | chr6_1:81094509-81094528 | None:intergenic | 55.0% |
| CTTAGCTGTGGGGTTTCTGC+AGG | - | chr6_1:81095722-81095741 | Msa0894680:intron | 55.0% | |
| GCACAAGGGGCCAAACTAAG+GGG | - | chr6_1:81096343-81096362 | Msa0894680:intron | 55.0% | |
| CCCCACCCCTGTTGTAAACA+AGG | + | chr6_1:81096927-81096946 | None:intergenic | 55.0% | |
| AGTAGCATGGGGAGCTGGAG+AGG | - | chr6_1:81093968-81093987 | Msa0894680:intron | 60.0% | |
| ! | ATGGGGAGCTGGAGAGGCAT+TGG | - | chr6_1:81093974-81093993 | Msa0894680:intron | 60.0% |
| GCTGCAGTAGCATGGGGAGC+TGG | - | chr6_1:81093963-81093982 | Msa0894680:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 81093667 | 81097100 | 81093667 | ID=Msa0894680;Name=Msa0894680 |
| chr6_1 | mRNA | 81093667 | 81097100 | 81093667 | ID=Msa0894680-mRNA-1;Parent=Msa0894680;Name=Msa0894680-mRNA-1;_AED=0.29;_eAED=0.29;_QI=139|0.66|0.4|1|0.77|0.6|10|0|276 |
| chr6_1 | exon | 81093667 | 81093749 | 81093667 | ID=Msa0894680-mRNA-1:exon:13651;Parent=Msa0894680-mRNA-1 |
| chr6_1 | exon | 81094032 | 81094083 | 81094032 | ID=Msa0894680-mRNA-1:exon:13650;Parent=Msa0894680-mRNA-1 |
| chr6_1 | exon | 81094183 | 81094244 | 81094183 | ID=Msa0894680-mRNA-1:exon:13649;Parent=Msa0894680-mRNA-1 |
| chr6_1 | exon | 81094352 | 81094427 | 81094352 | ID=Msa0894680-mRNA-1:exon:13648;Parent=Msa0894680-mRNA-1 |
| chr6_1 | exon | 81094614 | 81094696 | 81094614 | ID=Msa0894680-mRNA-1:exon:13647;Parent=Msa0894680-mRNA-1 |
| chr6_1 | exon | 81095024 | 81095256 | 81095024 | ID=Msa0894680-mRNA-1:exon:13646;Parent=Msa0894680-mRNA-1 |
| chr6_1 | exon | 81095266 | 81095346 | 81095266 | ID=Msa0894680-mRNA-1:exon:13645;Parent=Msa0894680-mRNA-1 |
| chr6_1 | exon | 81096014 | 81096020 | 81096014 | ID=Msa0894680-mRNA-1:exon:13644;Parent=Msa0894680-mRNA-1 |
| chr6_1 | exon | 81096696 | 81096803 | 81096696 | ID=Msa0894680-mRNA-1:exon:13643;Parent=Msa0894680-mRNA-1 |
| chr6_1 | exon | 81096919 | 81097100 | 81096919 | ID=Msa0894680-mRNA-1:exon:13642;Parent=Msa0894680-mRNA-1 |
| chr6_1 | five_prime_UTR | 81096962 | 81097100 | 81096962 | ID=Msa0894680-mRNA-1:five_prime_utr;Parent=Msa0894680-mRNA-1 |
| chr6_1 | CDS | 81096919 | 81096961 | 81096919 | ID=Msa0894680-mRNA-1:cds;Parent=Msa0894680-mRNA-1 |
| chr6_1 | CDS | 81096696 | 81096803 | 81096696 | ID=Msa0894680-mRNA-1:cds;Parent=Msa0894680-mRNA-1 |
| chr6_1 | CDS | 81096014 | 81096020 | 81096014 | ID=Msa0894680-mRNA-1:cds;Parent=Msa0894680-mRNA-1 |
| chr6_1 | CDS | 81095266 | 81095346 | 81095266 | ID=Msa0894680-mRNA-1:cds;Parent=Msa0894680-mRNA-1 |
| chr6_1 | CDS | 81095024 | 81095256 | 81095024 | ID=Msa0894680-mRNA-1:cds;Parent=Msa0894680-mRNA-1 |
| chr6_1 | CDS | 81094614 | 81094696 | 81094614 | ID=Msa0894680-mRNA-1:cds;Parent=Msa0894680-mRNA-1 |
| chr6_1 | CDS | 81094352 | 81094427 | 81094352 | ID=Msa0894680-mRNA-1:cds;Parent=Msa0894680-mRNA-1 |
| chr6_1 | CDS | 81094183 | 81094244 | 81094183 | ID=Msa0894680-mRNA-1:cds;Parent=Msa0894680-mRNA-1 |
| chr6_1 | CDS | 81094032 | 81094083 | 81094032 | ID=Msa0894680-mRNA-1:cds;Parent=Msa0894680-mRNA-1 |
| chr6_1 | CDS | 81093667 | 81093749 | 81093667 | ID=Msa0894680-mRNA-1:cds;Parent=Msa0894680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
