AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1165090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165090 MtrunA17_Chr7g0272641 95.783 664 14 2 1 650 1 664 0.0 1296
Msa1165090 MtrunA17_Chr1g0197401 43.976 498 248 7 171 642 12 504 9.15e-142 422
Msa1165090 MtrunA17_Chr4g0066851 35.119 336 200 4 169 486 79 414 1.13e-60 215
Msa1165090 MtrunA17_Chr2g0286241 33.968 315 191 3 169 466 71 385 2.87e-57 206
Msa1165090 MtrunA17_Chr1g0192821 33.784 296 166 12 174 446 15 303 1.18e-31 130
Msa1165090 MtrunA17_Chr4g0061581 27.946 297 155 6 170 455 61 309 1.48e-27 117
Msa1165090 MtrunA17_Chr1g0198221 32.886 149 90 5 279 419 20 166 1.43e-14 76.6
Msa1165090 MtrunA17_Chr1g0198221 25.267 281 150 7 170 433 50 287 1.13e-13 73.9
Msa1165090 MtrunA17_Chr1g0198221 23.113 212 123 4 180 389 13 186 8.56e-12 68.2
Msa1165090 MtrunA17_Chr2g0311721 26.744 258 139 7 170 423 4 215 1.93e-14 75.1
Msa1165090 MtrunA17_Chr4g0074871 25.000 292 174 13 190 453 281 555 3.10e-12 70.1
Msa1165090 MtrunA17_Chr4g0074871 30.233 172 106 5 291 456 294 457 1.55e-11 67.8
Msa1165090 MtrunA17_Chr1g0196221 32.877 146 75 6 288 414 45 186 5.54e-11 65.9
Msa1165090 MtrunA17_Chr8g0391901 30.282 142 93 4 278 414 315 455 7.28e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165090 AT3G05420.2 72.090 670 161 7 3 649 1 667 0.0 985
Msa1165090 AT3G05420.1 72.090 670 160 8 3 649 1 666 0.0 980
Msa1165090 AT5G27630.3 68.373 664 182 9 5 643 4 664 0.0 908
Msa1165090 AT5G27630.4 68.079 661 175 9 5 643 4 650 0.0 898
Msa1165090 AT5G27630.1 68.030 660 171 9 5 643 4 644 0.0 889
Msa1165090 AT5G27630.2 68.539 534 145 6 5 518 4 534 0.0 742
Msa1165090 AT5G04420.2 44.622 502 233 6 171 637 19 510 2.29e-143 427
Msa1165090 AT5G04420.1 44.622 502 233 6 171 637 19 510 2.29e-143 427
Msa1165090 AT5G04420.3 44.622 502 233 6 171 637 19 510 2.29e-143 427
Msa1165090 AT5G18590.2 35.082 305 179 5 167 453 59 362 1.96e-54 198
Msa1165090 AT5G18590.1 35.082 305 179 5 167 453 59 362 1.96e-54 198
Msa1165090 AT1G18610.1 27.778 342 175 10 168 481 55 352 1.51e-27 117
Msa1165090 AT1G18610.2 27.778 342 175 10 168 481 55 352 1.51e-27 117
Msa1165090 AT1G74150.3 28.521 284 143 7 161 426 38 279 2.57e-26 114
Msa1165090 AT1G74150.2 28.521 284 143 7 161 426 38 279 2.65e-26 114
Msa1165090 AT1G74150.4 28.462 260 137 5 174 426 46 263 2.91e-26 114
Msa1165090 AT1G74150.4 31.875 160 97 5 313 465 42 196 2.94e-13 73.2
Msa1165090 AT1G74150.1 28.521 284 143 7 161 426 38 279 2.99e-26 114
Msa1165090 AT2G36360.2 27.240 279 142 8 170 402 50 313 2.80e-16 82.4
Msa1165090 AT2G36360.2 31.757 148 93 3 278 418 19 165 7.34e-16 81.3
Msa1165090 AT2G36360.2 25.000 212 121 5 179 389 12 186 4.68e-12 69.3
Msa1165090 AT2G36360.1 27.240 279 142 8 170 402 50 313 2.80e-16 82.4
Msa1165090 AT2G36360.1 31.757 148 93 3 278 418 19 165 7.34e-16 81.3
Msa1165090 AT2G36360.1 25.000 212 121 5 179 389 12 186 4.68e-12 69.3
Msa1165090 AT2G36360.3 27.240 279 142 8 170 402 50 313 2.98e-16 82.4
Msa1165090 AT2G36360.3 31.757 148 93 3 278 418 19 165 7.21e-16 81.3
Msa1165090 AT2G36360.3 25.000 212 121 5 179 389 12 186 4.80e-12 69.3
Msa1165090 AT2G36360.4 27.240 279 142 8 170 402 50 313 4.36e-16 82.0
Msa1165090 AT2G36360.4 31.757 148 93 3 278 418 19 165 9.12e-16 81.3
Msa1165090 AT2G36360.4 25.000 212 121 5 179 389 12 186 8.31e-12 68.6
Msa1165090 AT4G04670.1 30.070 143 99 1 278 420 324 465 2.55e-15 80.5
Msa1165090 AT4G04670.1 23.220 323 194 8 182 499 320 593 2.42e-12 70.9
Msa1165090 AT1G74150.6 34.127 126 77 3 278 398 14 138 4.07e-14 75.1
Msa1165090 AT1G74150.5 34.127 126 77 3 278 398 14 138 4.07e-14 75.1
Msa1165090 AT2G36360.5 26.389 288 142 9 170 402 50 322 4.31e-14 75.9
Msa1165090 AT2G36360.5 24.643 280 168 9 179 418 12 288 1.91e-11 67.4
Msa1165090 AT4G27780.2 30.508 118 78 1 16 133 106 219 1.99e-12 68.6
Msa1165090 AT4G27780.1 35.165 91 55 1 16 106 106 192 7.65e-12 67.8
Msa1165090 AT2G18915.2 28.772 285 158 15 232 490 248 513 2.60e-11 67.0
Msa1165090 AT2G18915.1 28.772 285 158 15 232 490 238 503 3.06e-11 67.0
Msa1165090 AT2G27210.2 37.168 113 66 4 306 414 153 264 5.19e-11 66.6
Msa1165090 AT2G27210.1 37.168 113 66 4 306 414 153 264 5.52e-11 66.6
Msa1165090 AT5G48180.1 25.890 309 165 13 170 465 4 261 7.35e-11 64.7
Msa1165090 AT5G57360.1 27.308 260 150 11 214 453 228 468 9.11e-11 65.5
Msa1165090 AT1G08420.2 36.283 113 67 4 306 414 164 275 9.42e-11 65.9
Msa1165090 AT1G08420.1 36.283 113 67 4 306 414 164 275 9.44e-11 65.9
Msa1165090 AT5G57360.2 27.308 260 150 11 214 453 228 468 9.78e-11 65.5

Find 194 sgRNAs with CRISPR-Local

Find 619 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAGAAGAGCGGTGGATTT+AGG 0.146379 7_4:-56943244 None:intergenic
GGTCAGAAGCTCCAAAATTT+TGG 0.162657 7_4:+56951854 Msa1165090:CDS
GAAGAAGAGCGGTGGATTTA+GGG 0.181306 7_4:-56943243 None:intergenic
ATCCATGTTATGTTATTTAT+TGG 0.192924 7_4:-56942882 None:intergenic
AATAAGATTTAGCTTCTATT+TGG 0.195736 7_4:+56952124 Msa1165090:three_prime_UTR
TTTGTAATGTTCCAAAATTT+TGG 0.220477 7_4:-56951865 None:intergenic
CGGGTAGCATTTGTAGCATT+TGG 0.236529 7_4:-56950103 None:intergenic
GTGTTCCCATTCTCAATTAC+TGG 0.248320 7_4:-56945584 None:intergenic
GACCGATACTTACTTATCTT+TGG 0.248494 7_4:+56947993 Msa1165090:CDS
AAAACTATTTCCTCTGAAAA+TGG 0.248717 7_4:+56945620 Msa1165090:CDS
GGCGTGTGGGGTTGGCTTGC+CGG 0.253275 7_4:+56951968 Msa1165090:CDS
CTTGAATGACCTGCATATTC+TGG 0.261804 7_4:+56947617 Msa1165090:CDS
AGGACATGAAGGGAAAATTT+TGG 0.262823 7_4:+56950150 Msa1165090:CDS
TTCATTTGAACGTCTATTAC+AGG 0.265735 7_4:-56945050 None:intergenic
TTCATTCATCATCTGCATTC+TGG 0.278937 7_4:-56952000 None:intergenic
AAAACCTCATATCGGGCTTT+TGG 0.290754 7_4:-56945743 None:intergenic
CGCGATACAGGATCTGAATT+TGG 0.295314 7_4:+56950124 Msa1165090:CDS
CAAGATAAATTGTACATATA+TGG 0.314234 7_4:+56945881 Msa1165090:CDS
GTTCTTCTCTCTCAGCCTTC+AGG 0.316569 7_4:-56950814 None:intergenic
TTTGGACGTTGACCAGATAT+TGG 0.327554 7_4:-56945725 None:intergenic
CTGAACAACAATGCTTCATT+TGG 0.327692 7_4:+56952034 Msa1165090:three_prime_UTR
TCCATGTGCTGGCCATTCTT+TGG 0.327874 7_4:+56946232 Msa1165090:CDS
GAAGATGTACTTGTATCTTT+TGG 0.331794 7_4:+56949877 Msa1165090:CDS
AAGAGATTTAGTTGGAGAAT+TGG 0.336776 7_4:-56943209 None:intergenic
CTCAATTACTGGTTCAACTT+TGG 0.347352 7_4:-56945573 None:intergenic
CGACGAGTCCTCTACAACTT+TGG 0.350805 7_4:+56946208 Msa1165090:CDS
GGGTAGCATTTGTAGCATTT+GGG 0.363871 7_4:-56950102 None:intergenic
GTCATTACAGGGCTTGAGTT+TGG 0.367865 7_4:+56949834 Msa1165090:intron
TATTATACCTTGGATACTTT+CGG 0.369378 7_4:-56946414 None:intergenic
TCTTCAATTCAAACTTAACT+TGG 0.369386 7_4:-56943056 None:intergenic
CAGGTGGAGGTTGCTGAATT+AGG 0.373715 7_4:+56951833 Msa1165090:intron
ATAAGATTTAGCTTCTATTT+GGG 0.375495 7_4:+56952125 Msa1165090:three_prime_UTR
TGCAAGGTCGATTTGTGGCT+TGG 0.377894 7_4:-56950034 None:intergenic
GCCGCAGCGTAGAACCGTTC+TGG 0.381048 7_4:-56943163 None:intergenic
GACTGATATGAGATCACCTT+TGG 0.382324 7_4:-56950792 None:intergenic
GCTCAGGTGGCGTGTGGGGT+TGG 0.389166 7_4:+56951960 Msa1165090:CDS
TCTCTATAGCTTATATCAAC+AGG 0.390597 7_4:+56943264 Msa1165090:CDS
TTATTGTGTATTAATTAATT+CGG 0.398423 7_4:+56952085 Msa1165090:three_prime_UTR
AGAGACGGTTGTACTGAATA+TGG 0.398869 7_4:+56949634 Msa1165090:CDS
TGGATTGCACCTCCAATATC+TGG 0.399536 7_4:+56945713 Msa1165090:CDS
GGTTGGCTTGCCGGTACTCC+TGG 0.400632 7_4:+56951977 Msa1165090:CDS
TTAGATGTAAGAGATTTAGT+TGG 0.402954 7_4:-56943217 None:intergenic
TTGGTCAAAGCTTGAGGTTA+AGG 0.406832 7_4:+56946181 Msa1165090:CDS
GATGTTGTTATGGAAGGCTT+TGG 0.411884 7_4:+56945668 Msa1165090:CDS
ACATCCCAGAACCCAGTTCA+TGG 0.419192 7_4:+56944319 Msa1165090:CDS
TTGGTTGTAAGTTCATATAA+TGG 0.423699 7_4:+56949853 Msa1165090:CDS
AATAAGCTCCTGTCAATTGC+CGG 0.431161 7_4:+56946374 Msa1165090:CDS
ACAAATGCTACCCGCGATAC+AGG 0.439068 7_4:+56950112 Msa1165090:CDS
CAGCGGTATGATCAGACCTT+GGG 0.439160 7_4:-56947959 None:intergenic
GCGATGGCGAGAGCAAGTTC+TGG 0.441233 7_4:+56943130 Msa1165090:CDS
GCAGGGCTCAGGTGGCGTGT+GGG 0.442660 7_4:+56951955 Msa1165090:CDS
TGCATTCTGGCCAGGAGTAC+CGG 0.445380 7_4:-56951987 None:intergenic
CGATACTTACTTATCTTTGG+AGG 0.449279 7_4:+56947996 Msa1165090:CDS
GTTGAACCAGTAATTGAGAA+TGG 0.449496 7_4:+56945578 Msa1165090:CDS
ATGGAAGGCTTTGGTTCAGT+TGG 0.450341 7_4:+56945677 Msa1165090:CDS
ACAGGATAAAGATGTTGTTA+TGG 0.450800 7_4:+56945658 Msa1165090:CDS
GCCAATCAGTGTCCCTTGTC+GGG 0.450997 7_4:+56947550 Msa1165090:CDS
CAAGAGCCAAAACCTCATAT+CGG 0.452451 7_4:-56945751 None:intergenic
CGAGCTGACCACGTACTGAT+TGG 0.453315 7_4:-56951319 None:intergenic
GTGTGACAGTAGGGGAGAAC+TGG 0.456299 7_4:+56948216 Msa1165090:CDS
TGCGGCATCTTACGTCGGTT+TGG 0.458181 7_4:+56943180 Msa1165090:CDS
TTGTGTGGCCGGCAATTGAC+AGG 0.459083 7_4:-56946382 None:intergenic
GGCAGGGCTCAGGTGGCGTG+TGG 0.462148 7_4:+56951954 Msa1165090:CDS
GTTTAATACAAACCAAAGAA+TGG 0.462569 7_4:-56946244 None:intergenic
AGCTCGCTGCTGAGCAGTCA+AGG 0.464648 7_4:+56951336 Msa1165090:CDS
TTTAAGTGCAAAACAGAGGC+AGG 0.465741 7_4:+56951937 Msa1165090:CDS
TGGATTTGAGAAGCTGGACT+TGG 0.465890 7_4:+56946162 Msa1165090:CDS
GGGGAGAACTGGTTCATTGT+TGG 0.466702 7_4:+56948227 Msa1165090:CDS
CAGTTGGAGTCTATGATCAA+TGG 0.467355 7_4:+56945693 Msa1165090:CDS
TGACCTGCATATTCTGGACT+TGG 0.470489 7_4:+56947623 Msa1165090:CDS
TGAACTCCTCCAGCGGCAAA+AGG 0.472639 7_4:+56951895 Msa1165090:CDS
TCTGAAAATGGAAATCAAGT+TGG 0.477894 7_4:+56945632 Msa1165090:CDS
GGCCAATCAGTGTCCCTTGT+CGG 0.478649 7_4:+56947549 Msa1165090:CDS
ATCAATTTCGTCCCATGTCA+TGG 0.481723 7_4:-56947649 None:intergenic
ATGTTACCACTGACCAAGCC+AGG 0.482985 7_4:-56949661 None:intergenic
TATGCTTTCTAGGTATCACT+TGG 0.484168 7_4:+56947404 Msa1165090:intron
AAATTGTGGAGCATAGCAAA+TGG 0.484561 7_4:+56944343 Msa1165090:CDS
GCATGTCCTGCACGTGGCGT+TGG 0.486099 7_4:-56948191 None:intergenic
TCCCGACAAGGGACACTGAT+TGG 0.489111 7_4:-56947551 None:intergenic
GCATCTTACGTCGGTTTGGA+TGG 0.491314 7_4:+56943184 Msa1165090:CDS
TGGATTGCAAGGTCGATTTG+TGG 0.491543 7_4:-56950039 None:intergenic
GACATGCTGGTGTGACAGTA+GGG 0.492988 7_4:+56948207 Msa1165090:CDS
CTGGGTTCTGGGATGTTACA+AGG 0.494600 7_4:-56944312 None:intergenic
GATACTTACTTATCTTTGGA+GGG 0.495002 7_4:+56947997 Msa1165090:CDS
CAGGGCTCAGGTGGCGTGTG+GGG 0.498458 7_4:+56951956 Msa1165090:CDS
CTTCAATTCAAACTTAACTT+GGG 0.499993 7_4:-56943055 None:intergenic
ACTAGAATCATCACTCAGTA+AGG 0.502282 7_4:+56950835 Msa1165090:CDS
GCAAAACAGAGGCAGGGCTC+AGG 0.503036 7_4:+56951944 Msa1165090:CDS
CATAATATTATTATTAGTTG+AGG 0.508426 7_4:+56942995 Msa1165090:five_prime_UTR
TCATCATCTGCATTCTGGCC+AGG 0.509974 7_4:-56951995 None:intergenic
TTGAACCAGTAATTGAGAAT+GGG 0.511798 7_4:+56945579 Msa1165090:CDS
GGCAGAAACACTGTCTGGTA+TGG 0.512137 7_4:-56950077 None:intergenic
TGATGCAGTTGGAACCAGCT+TGG 0.513159 7_4:+56944838 Msa1165090:intron
TACTTACTTATCTTTGGAGG+GGG 0.514190 7_4:+56947999 Msa1165090:CDS
TAAAAGTAGTTACCTTGTAA+AGG 0.514368 7_4:-56950919 None:intergenic
TTCTGCAGGGGCTTCAGAGA+CGG 0.519356 7_4:+56949619 Msa1165090:intron
TGAATATGGCTACCCTGGCT+TGG 0.523714 7_4:+56949648 Msa1165090:CDS
TCAGTGGTAACATCTGTTCA+AGG 0.525727 7_4:+56949671 Msa1165090:CDS
CATGAAGATCACTAAGATAA+CGG 0.527182 7_4:-56945919 None:intergenic
GAGAACTGGTTCATTGTTGG+TGG 0.528590 7_4:+56948230 Msa1165090:CDS
AACTGGTTCATTGTTGGTGG+CGG 0.528677 7_4:+56948233 Msa1165090:CDS
TGGAAGACATGTTTCCAAGC+TGG 0.531427 7_4:-56944852 None:intergenic
TGGAATCTCACCTTGTTGTG+TGG 0.532017 7_4:-56948171 None:intergenic
CTATGTCACTACAGATTGCA+TGG 0.533076 7_4:+56946348 Msa1165090:intron
GAATTTGGAGCAGGACATGA+AGG 0.533920 7_4:+56950139 Msa1165090:CDS
GTCAAGGTGTTTCAAACTTG+AGG 0.536182 7_4:+56951352 Msa1165090:CDS
AAGAGCCAAAACCTCATATC+GGG 0.537648 7_4:-56945750 None:intergenic
ATCAGAAATGTCGATGGCGA+TGG 0.538481 7_4:+56943114 Msa1165090:exon
GAGATTCCAACGCCACGTGC+AGG 0.540331 7_4:+56948185 Msa1165090:CDS
GCGTGTTTCTGTTGCTAGTG+AGG 0.541577 7_4:+56949694 Msa1165090:CDS
AATTGTGGAGCATAGCAAAT+GGG 0.542441 7_4:+56944344 Msa1165090:CDS
TTTAGCTTCTATTTGGGCGG+AGG 0.543422 7_4:+56952131 Msa1165090:three_prime_UTR
TGGAGCATAGCAAATGGGCC+AGG 0.543498 7_4:+56944349 Msa1165090:CDS
TCAAAGCTTGAGGTTAAGGC+TGG 0.545236 7_4:+56946185 Msa1165090:CDS
AAACAGAGGCAGGGCTCAGG+TGG 0.548572 7_4:+56951947 Msa1165090:CDS
ATGCTTTCTAGGTATCACTT+GGG 0.551411 7_4:+56947405 Msa1165090:intron
GGACGTTGACCAGATATTGG+AGG 0.551930 7_4:-56945722 None:intergenic
ACGTCCAAAAGCCCGATATG+AGG 0.553043 7_4:+56945739 Msa1165090:CDS
GATAAAGATGTTGTTATGGA+AGG 0.553076 7_4:+56945662 Msa1165090:CDS
CTGGACTTGGTCAAAGCTTG+AGG 0.558338 7_4:+56946175 Msa1165090:CDS
AAATTCAGATCCTGTATCGC+GGG 0.560039 7_4:-56950122 None:intergenic
GCAGCGGTATGATCAGACCT+TGG 0.560127 7_4:-56947960 None:intergenic
GATAAATTGTACATATATGG+TGG 0.560376 7_4:+56945884 Msa1165090:CDS
ACAGGATCTGAATTTGGAGC+AGG 0.561532 7_4:+56950130 Msa1165090:CDS
TTGTCATTTCAGGCTAGTGT+AGG 0.561898 7_4:+56944288 Msa1165090:intron
ATGTAAATCATTGTAGCAAG+TGG 0.562384 7_4:-56948030 None:intergenic
ACAACTTTGGATCCATGTGC+TGG 0.563526 7_4:+56946221 Msa1165090:CDS
ACGCCACGTGCAGGACATGC+TGG 0.566577 7_4:+56948194 Msa1165090:CDS
ACCAAAGAATGGCCAGCACA+TGG 0.572956 7_4:-56946233 None:intergenic
ATACTTACTTATCTTTGGAG+GGG 0.575466 7_4:+56947998 Msa1165090:CDS
GGCTACCCTGGCTTGGTCAG+TGG 0.575689 7_4:+56949655 Msa1165090:CDS
TGCTTTCTAGGTATCACTTG+GGG 0.576352 7_4:+56947406 Msa1165090:intron
CTCCAAAGATAAGTAAGTAT+CGG 0.576573 7_4:-56947995 None:intergenic
GCGGAGTGCCTCCTTCCCCA+AGG 0.579224 7_4:+56947943 Msa1165090:intron
GGGACGGCAGAAACACTGTC+TGG 0.580029 7_4:-56950082 None:intergenic
TGATCTCATATCAGTCCTGA+AGG 0.580681 7_4:+56950799 Msa1165090:CDS
ATTGTTGTTCAGTTAAGCCA+AGG 0.581686 7_4:-56952023 None:intergenic
CTGGTTTGCAATATCCAGAA+CGG 0.583439 7_4:+56943149 Msa1165090:CDS
TATGTCACTACAGATTGCAT+GGG 0.589491 7_4:+56946349 Msa1165090:intron
TAATAACTCTGACCTTTACA+AGG 0.591192 7_4:+56950907 Msa1165090:CDS
AGCCAATAAATAACATAACA+TGG 0.591206 7_4:+56942880 Msa1165090:five_prime_UTR
AGCATTTGTAGCATTTGGGA+CGG 0.593329 7_4:-56950098 None:intergenic
TCATACCGCTGCTGTACATG+TGG 0.596367 7_4:+56947971 Msa1165090:CDS
ACCCAGTTCATGGAAAATTG+TGG 0.599258 7_4:+56944329 Msa1165090:CDS
TGATCAGACCTTGGGGAAGG+AGG 0.599374 7_4:-56947951 None:intergenic
GGAATCTCACCTTGTTGTGT+GGG 0.600090 7_4:-56948170 None:intergenic
TACGCTGCGGCATCTTACGT+CGG 0.601399 7_4:+56943175 Msa1165090:CDS
TCTTCAACTAAAGCAAGAGC+TGG 0.604945 7_4:+56950871 Msa1165090:CDS
GATCCTTCCGAAAGTATCCA+AGG 0.604958 7_4:+56946407 Msa1165090:CDS
GCTGATGACTGTATTCAAAG+TGG 0.605954 7_4:+56952217 Msa1165090:three_prime_UTR
CAGTGGTAACATCTGTTCAA+GGG 0.607684 7_4:+56949672 Msa1165090:CDS
ATACCTTGGATACTTTCGGA+AGG 0.608008 7_4:-56946410 None:intergenic
GTTGTGTAGGAAGAAGATCC+TGG 0.609571 7_4:+56944993 Msa1165090:intron
GGACATGCTGGTGTGACAGT+AGG 0.609684 7_4:+56948206 Msa1165090:CDS
TGGAAATCAAGTTGGAACAC+AGG 0.610735 7_4:+56945640 Msa1165090:CDS
TGGACTTGGAAACCATGACA+TGG 0.612583 7_4:+56947637 Msa1165090:CDS
TGTACTGAATATGGCTACCC+TGG 0.613350 7_4:+56949643 Msa1165090:CDS
GCTATAGAGAAGAAGAGCGG+TGG 0.614400 7_4:-56943251 None:intergenic
TGCAGATGATGAATGAACCT+TGG 0.618446 7_4:+56952006 Msa1165090:exon
ACATGGATCCAAAGTTGTAG+AGG 0.619016 7_4:-56946216 None:intergenic
TTGGTGGGCAAGATGCAAAG+AGG 0.621524 7_4:+56947589 Msa1165090:CDS
TGGTCTCGTCCCACACAACA+AGG 0.621932 7_4:+56948161 Msa1165090:CDS
AGATTTAGCTTCTATTTGGG+CGG 0.624912 7_4:+56952128 Msa1165090:three_prime_UTR
TTTCCAAGTCCAGAATATGC+AGG 0.626613 7_4:-56947626 None:intergenic
ATAATAATCAGAAATGTCGA+TGG 0.631937 7_4:+56943108 Msa1165090:exon
GATGCTCTTGAATACCAACC+AGG 0.635858 7_4:-56945011 None:intergenic
GGTATCATACAGAAATCCAA+AGG 0.637667 7_4:+56950776 Msa1165090:intron
TGTAGGAAGAAGATCCTGGT+TGG 0.638077 7_4:+56944997 Msa1165090:intron
GTATGATCAGACCTTGGGGA+AGG 0.639783 7_4:-56947954 None:intergenic
ATTATAGTATGATATAGTGA+AGG 0.640204 7_4:+56952174 Msa1165090:three_prime_UTR
AAGGTCAGAGTTATTAGACT+CGG 0.646046 7_4:-56950900 None:intergenic
ACACCAGCATGTCCTGCACG+TGG 0.646357 7_4:-56948197 None:intergenic
GGACTTGGAAACCATGACAT+GGG 0.651250 7_4:+56947638 Msa1165090:CDS
CAAATTCAGATCCTGTATCG+CGG 0.652255 7_4:-56950123 None:intergenic
TTAAGTGCAAAACAGAGGCA+GGG 0.653026 7_4:+56951938 Msa1165090:CDS
CATACTATAATCCTCATGTG+TGG 0.653100 7_4:-56952162 None:intergenic
TACTAAGGTATTCCCGACAA+GGG 0.657707 7_4:-56947562 None:intergenic
TGTTACCACTGACCAAGCCA+GGG 0.658834 7_4:-56949660 None:intergenic
TTACTAAGGTATTCCCGACA+AGG 0.660142 7_4:-56947563 None:intergenic
ACATGCTGGTGTGACAGTAG+GGG 0.662631 7_4:+56948208 Msa1165090:CDS
CTGCTTTAAGTGCAAAACAG+AGG 0.668188 7_4:+56951933 Msa1165090:CDS
TCCAGAACGGTTCTACGCTG+CGG 0.674199 7_4:+56943162 Msa1165090:CDS
AATTTGGAGCAGGACATGAA+GGG 0.680238 7_4:+56950140 Msa1165090:CDS
AGCGGTATGATCAGACCTTG+GGG 0.686103 7_4:-56947958 None:intergenic
TCGGTCCACATGTACAGCAG+CGG 0.693231 7_4:-56947976 None:intergenic
ATATATGGTGGAAATCACAA+TGG 0.695684 7_4:+56945896 Msa1165090:CDS
TGTTGTATAAGAGTTATCCA+CGG 0.709908 7_4:-56950179 None:intergenic
TAGGAGCTCCAATCAGTACG+TGG 0.711841 7_4:+56951311 Msa1165090:intron
ATGTCACTACAGATTGCATG+GGG 0.712245 7_4:+56946350 Msa1165090:intron
TAAGCTATAGAGAAGAAGAG+CGG 0.722916 7_4:-56943254 None:intergenic
AGGAGCTTGAACTCCTCCAG+CGG 0.723909 7_4:+56951888 Msa1165090:CDS
GGTGGCGGTGACAACAAGAG+CGG 0.739017 7_4:+56948248 Msa1165090:CDS
GCTTTGTAGATATCACGTGG+AGG 0.759420 7_4:+56947528 Msa1165090:intron
GATGCTTTGTAGATATCACG+TGG 0.778850 7_4:+56947525 Msa1165090:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAATAAAATTAAAA+AGG + chr7_4:56951022-56951041 Msa1165090:intron 0.0%
!! AAATAAAATAAAATTAAAAA+GGG + chr7_4:56951023-56951042 Msa1165090:intron 0.0%
!! AACTTCAAAAATATATAAAT+GGG + chr7_4:56944532-56944551 Msa1165090:intron 10.0%
!!! TGATATTTTTTTTAACTAAA+TGG + chr7_4:56946123-56946142 Msa1165090:intron 10.0%
!! AAAAAGAAATAAAAAATGAA+AGG - chr7_4:56947329-56947348 None:intergenic 10.0%
!!! ATTTTTTTTCTTTAATATCT+AGG + chr7_4:56947751-56947770 Msa1165090:intron 10.0%
!!! TTTTTTTTCTTTAATATCTA+GGG + chr7_4:56947752-56947771 Msa1165090:intron 10.0%
!! CAAATAAAAATAAAATGAAA+AGG + chr7_4:56949266-56949285 Msa1165090:intron 10.0%
!!! TTAAAATTCCATTTTTATTT+TGG + chr7_4:56950945-56950964 Msa1165090:intron 10.0%
!! TTATTGTGTATTAATTAATT+CGG + chr7_4:56952085-56952104 Msa1165090:three_prime_UTR 10.0%
!! CATAATATTATTATTAGTTG+AGG + chr7_4:56942995-56943014 Msa1165090:five_prime_UTR 15.0%
!!! TGGTTTATTTAGTTATTTTT+GGG + chr7_4:56944187-56944206 Msa1165090:intron 15.0%
!! CAACTTCAAAAATATATAAA+TGG + chr7_4:56944531-56944550 Msa1165090:intron 15.0%
!! ACTTCAAAAATATATAAATG+GGG + chr7_4:56944533-56944552 Msa1165090:intron 15.0%
!! ATTATTATGCAATTATCTTA+TGG + chr7_4:56944693-56944712 Msa1165090:intron 15.0%
!!! ATACTAATTCTGTAATATTT+TGG + chr7_4:56946317-56946336 Msa1165090:intron 15.0%
!! TACATTAATATATTATACCT+TGG - chr7_4:56946427-56946446 None:intergenic 15.0%
!!! TAATGTGTTATAATTCTTTT+AGG + chr7_4:56946448-56946467 Msa1165090:intron 15.0%
!!! AATGTGTTATAATTCTTTTA+GGG + chr7_4:56946449-56946468 Msa1165090:intron 15.0%
!!! TAAATTGGATTTTGTAAAAT+TGG + chr7_4:56948473-56948492 Msa1165090:intron 15.0%
!! TTAAAAATAATAACTGACAA+TGG - chr7_4:56948815-56948834 None:intergenic 15.0%
!!! GAATTTTATTTGATATAAGA+TGG - chr7_4:56949030-56949049 None:intergenic 15.0%
!! AATATAGTAATTCTCTAAAT+GGG + chr7_4:56949096-56949115 Msa1165090:intron 15.0%
!! AAACAAAACAAGAATTTATT+TGG - chr7_4:56949336-56949355 None:intergenic 15.0%
!!! ATAAATTCTTGTTTTGTTTA+TGG + chr7_4:56949337-56949356 Msa1165090:intron 15.0%
!!! TTTTAATTATGTTAATCAGT+GGG - chr7_4:56949809-56949828 None:intergenic 15.0%
!!! ATTTTAATTATGTTAATCAG+TGG - chr7_4:56949810-56949829 None:intergenic 15.0%
!!! TATGGAATTTTCAATTATTT+TGG - chr7_4:56950062-56950081 None:intergenic 15.0%
!! ATGATTGAAGAAAATTTATT+TGG + chr7_4:56951454-56951473 Msa1165090:intron 15.0%
!! AACTTAAAAATATATATTCG+AGG + chr7_4:56951779-56951798 Msa1165090:intron 15.0%
!! ACTTAAAAATATATATTCGA+GGG + chr7_4:56951780-56951799 Msa1165090:intron 15.0%
!!! ATCCATGTTATGTTATTTAT+TGG - chr7_4:56942885-56942904 None:intergenic 20.0%
!!! TTTTGATTATTCTATTCAGA+GGG - chr7_4:56943029-56943048 None:intergenic 20.0%
!!! ATTTTGATTATTCTATTCAG+AGG - chr7_4:56943030-56943049 None:intergenic 20.0%
!!! GTATGAATTTTCTGAAATTT+TGG + chr7_4:56943639-56943658 Msa1165090:intron 20.0%
!!! ATGTAATAATGTTGATTTAC+TGG + chr7_4:56944136-56944155 Msa1165090:intron 20.0%
!!! GTGGTTTATTTAGTTATTTT+TGG + chr7_4:56944186-56944205 Msa1165090:intron 20.0%
!! TGCATAATAATATAAATGCT+TGG - chr7_4:56944684-56944703 None:intergenic 20.0%
!!! TTTTTTTAACATTTCTTCCT+TGG + chr7_4:56944924-56944943 Msa1165090:intron 20.0%
!! CAATATATTACATTATACCA+AGG - chr7_4:56944944-56944963 None:intergenic 20.0%
!! AAATAAAAACGAAAGTAATC+AGG - chr7_4:56944967-56944986 None:intergenic 20.0%
!!! TTTATTTTCTTTTGTTGTGT+AGG + chr7_4:56944980-56944999 Msa1165090:intron 20.0%
!!! CAAGTAAGAAATCAATATTT+TGG + chr7_4:56945240-56945259 Msa1165090:intron 20.0%
!! TAGAAATAGATTCATTTAAG+AGG + chr7_4:56945405-56945424 Msa1165090:intron 20.0%
!! CAAGATAAATTGTACATATA+TGG + chr7_4:56945881-56945900 Msa1165090:CDS 20.0%
!! TGAAATAATAGTTTATCTTG+TGG + chr7_4:56945989-56946008 Msa1165090:intron 20.0%
!! GAAATAATAGTTTATCTTGT+GGG + chr7_4:56945990-56946009 Msa1165090:intron 20.0%
!! AAATAATAGTTTATCTTGTG+GGG + chr7_4:56945991-56946010 Msa1165090:intron 20.0%
!! TACAATTACTTTCAAAATTG+TGG - chr7_4:56946028-56946047 None:intergenic 20.0%
!!! TTAACTTGGTCAATATAAAA+GGG - chr7_4:56946094-56946113 None:intergenic 20.0%
!!! TAATTCTGTAATATTTTGGT+CGG + chr7_4:56946321-56946340 Msa1165090:intron 20.0%
!!! ATGTGTTATAATTCTTTTAG+GGG + chr7_4:56946450-56946469 Msa1165090:intron 20.0%
!!! TATAGATAGTTTTAGAGAAT+AGG - chr7_4:56946667-56946686 None:intergenic 20.0%
!! GAACTAAGGATAATATTATT+AGG - chr7_4:56946707-56946726 None:intergenic 20.0%
!!! TTAATACTACTAGTTTATCT+TGG - chr7_4:56947108-56947127 None:intergenic 20.0%
!! GTATTAATAAGTGACTTATT+TGG + chr7_4:56947121-56947140 Msa1165090:intron 20.0%
!! GACAAATATATCTAGTAATT+TGG + chr7_4:56947153-56947172 Msa1165090:intron 20.0%
!!! AGACTGTTTTTTATTTGAAA+GGG + chr7_4:56947194-56947213 Msa1165090:intron 20.0%
!! AGAAAAAATGAGTGAAAAAA+GGG - chr7_4:56947443-56947462 None:intergenic 20.0%
!! AAGAAAAAATGAGTGAAAAA+AGG - chr7_4:56947444-56947463 None:intergenic 20.0%
!!! TTTTAACTTATCAGAACTAT+GGG + chr7_4:56947718-56947737 Msa1165090:intron 20.0%
!! TTTAAATCTAAGTGATAAAG+CGG - chr7_4:56948286-56948305 None:intergenic 20.0%
!! AATATTTGTTCAACATATCT+AGG - chr7_4:56948352-56948371 None:intergenic 20.0%
!!! AAACATGATTTTCACTAAAT+TGG + chr7_4:56948458-56948477 Msa1165090:intron 20.0%
!!! ATAAAAAATAGCTTTTGCAT+TGG - chr7_4:56948594-56948613 None:intergenic 20.0%
!! AATATGATTTAATGCATGTT+TGG - chr7_4:56948730-56948749 None:intergenic 20.0%
!! GAATATAGTAATTCTCTAAA+TGG + chr7_4:56949095-56949114 Msa1165090:intron 20.0%
!!! AAGTATTCCTGTAATATTTT+CGG + chr7_4:56949168-56949187 Msa1165090:intron 20.0%
!! AATATCCTTTGATAAGTTAT+AGG - chr7_4:56949227-56949246 None:intergenic 20.0%
!! TTTATTTGATTAACAAACTC+AGG - chr7_4:56949254-56949273 None:intergenic 20.0%
!! ATAAAATGAAAAGGCTTATT+AGG + chr7_4:56949275-56949294 Msa1165090:intron 20.0%
!!! TTGGTTTTATACTTTTAGAT+TGG + chr7_4:56949413-56949432 Msa1165090:intron 20.0%
!! CTTTAAATTTATCTACTCTA+AGG + chr7_4:56949487-56949506 Msa1165090:intron 20.0%
!! TTAGAAAAGAATTATGTTCA+TGG + chr7_4:56950305-56950324 Msa1165090:intron 20.0%
!! TATAAAATTAGTCAGATCTT+TGG - chr7_4:56950554-56950573 None:intergenic 20.0%
!!! AAGATCTGACTAATTTTATA+TGG + chr7_4:56950554-56950573 Msa1165090:intron 20.0%
!!! AGATCTGACTAATTTTATAT+GGG + chr7_4:56950555-56950574 Msa1165090:intron 20.0%
!! GACTAAATCCAAAATAAAAA+TGG - chr7_4:56950956-56950975 None:intergenic 20.0%
!! ATTGATCTTATTGTTATCAA+AGG + chr7_4:56951262-56951281 Msa1165090:intron 20.0%
!! AAAGAAATATTCTTATCATG+AGG - chr7_4:56951550-56951569 None:intergenic 20.0%
!! AAATAATTCTTTGCAAAACT+GGG + chr7_4:56951571-56951590 Msa1165090:intron 20.0%
!!! TTTGTAATGTTCCAAAATTT+TGG - chr7_4:56951868-56951887 None:intergenic 20.0%
!!! AAATTTTGGAACATTACAAA+AGG + chr7_4:56951868-56951887 Msa1165090:CDS 20.0%
!!! AATAAGATTTAGCTTCTATT+TGG + chr7_4:56952124-56952143 Msa1165090:three_prime_UTR 20.0%
!!! ATAAGATTTAGCTTCTATTT+GGG + chr7_4:56952125-56952144 Msa1165090:three_prime_UTR 20.0%
!! ATTATAGTATGATATAGTGA+AGG + chr7_4:56952174-56952193 Msa1165090:three_prime_UTR 20.0%
! AGCCAATAAATAACATAACA+TGG + chr7_4:56942880-56942899 Msa1165090:five_prime_UTR 25.0%
! CTTCAATTCAAACTTAACTT+GGG - chr7_4:56943058-56943077 None:intergenic 25.0%
! TCTTCAATTCAAACTTAACT+TGG - chr7_4:56943059-56943078 None:intergenic 25.0%
!! TGAATTGAAGAGTTTTCAAT+TGG + chr7_4:56943068-56943087 Msa1165090:five_prime_UTR 25.0%
! ATAATAATCAGAAATGTCGA+TGG + chr7_4:56943108-56943127 Msa1165090:exon 25.0%
! TTAGATGTAAGAGATTTAGT+TGG - chr7_4:56943220-56943239 None:intergenic 25.0%
!!! CTATGTGATTTTGATTTTCA+TGG + chr7_4:56943342-56943361 Msa1165090:intron 25.0%
! TTTACTTACTTTCTTTGTGT+TGG + chr7_4:56943417-56943436 Msa1165090:intron 25.0%
! CAAATCTACTATGTTATGTT+AGG - chr7_4:56943578-56943597 None:intergenic 25.0%
! TTCAGAAAATTCATACAGAT+CGG - chr7_4:56943635-56943654 None:intergenic 25.0%
!! AGTCAAACTGTTTTCATATA+AGG + chr7_4:56943814-56943833 Msa1165090:intron 25.0%
!! ATATAAGGTATAAGCTTTTC+AGG + chr7_4:56943829-56943848 Msa1165090:intron 25.0%
!!! AAGTTATTTTGGAGTGATTA+TGG + chr7_4:56943853-56943872 Msa1165090:intron 25.0%
! AATAAGCGGAAAATAGTTTA+TGG + chr7_4:56943877-56943896 Msa1165090:intron 25.0%
! CATTAAACCTTTATCTTCTA+TGG + chr7_4:56944433-56944452 Msa1165090:intron 25.0%
! TAGAACTCAATGAGTTTAAA+TGG - chr7_4:56944511-56944530 None:intergenic 25.0%
! CAATGCAAACATATAGAATA+TGG - chr7_4:56944632-56944651 None:intergenic 25.0%
!! TCTATATGTTTGCATTGATA+TGG + chr7_4:56944635-56944654 Msa1165090:intron 25.0%
! TCTCGAGAATATTGTTAAAT+TGG + chr7_4:56944808-56944827 Msa1165090:intron 25.0%
!! TCTTTTTGTGAAAATATTGG+AGG + chr7_4:56944888-56944907 Msa1165090:CDS 25.0%
!!! ATATTTTGGCCAATAGAATT+CGG + chr7_4:56945254-56945273 Msa1165090:intron 25.0%
!! CATTTTCAGATTTCATGATA+TGG + chr7_4:56945364-56945383 Msa1165090:intron 25.0%
! GTTAATAGTGACAACAAAAA+TGG - chr7_4:56945486-56945505 None:intergenic 25.0%
!! AAAACTATTTCCTCTGAAAA+TGG + chr7_4:56945620-56945639 Msa1165090:CDS 25.0%
! GATAAATTGTACATATATGG+TGG + chr7_4:56945884-56945903 Msa1165090:CDS 25.0%
! TTAAATATCTTTGTTGCATG+AGG + chr7_4:56945952-56945971 Msa1165090:intron 25.0%
! TCTGTTCATAACACAAAATA+TGG - chr7_4:56946054-56946073 None:intergenic 25.0%
!! CTTAACTTGGTCAATATAAA+AGG - chr7_4:56946095-56946114 None:intergenic 25.0%
! TATCAACACATAACTTAACT+TGG - chr7_4:56946108-56946127 None:intergenic 25.0%
! AACTAAATGGAAACAAATAC+AGG + chr7_4:56946136-56946155 Msa1165090:intron 25.0%
! GTTTAATACAAACCAAAGAA+TGG - chr7_4:56946247-56946266 None:intergenic 25.0%
! TATTATACCTTGGATACTTT+CGG - chr7_4:56946417-56946436 None:intergenic 25.0%
!!! TTATAATTCTTTTAGGGGTT+GGG + chr7_4:56946455-56946474 Msa1165090:intron 25.0%
! TAAATGAAAATGTGAGGAAT+AGG + chr7_4:56946492-56946511 Msa1165090:intron 25.0%
! AAATGAAAATGTGAGGAATA+GGG + chr7_4:56946493-56946512 Msa1165090:intron 25.0%
!! CATTAGAAGAGTTATCTTTT+TGG + chr7_4:56946537-56946556 Msa1165090:intron 25.0%
! TGTTAAATATTATGACAGTG+AGG + chr7_4:56946859-56946878 Msa1165090:intron 25.0%
! GTTAAATATTATGACAGTGA+GGG + chr7_4:56946860-56946879 Msa1165090:intron 25.0%
! TAAACATAATAGACACATAC+CGG - chr7_4:56946939-56946958 None:intergenic 25.0%
! TGCTAAAGATGCTTATAAAA+AGG - chr7_4:56947005-56947024 None:intergenic 25.0%
!!! GAGACTGTTTTTTATTTGAA+AGG + chr7_4:56947193-56947212 Msa1165090:intron 25.0%
!!! GACTGTTTTTTATTTGAAAG+GGG + chr7_4:56947195-56947214 Msa1165090:intron 25.0%
!!! AATACCTTAGTAATTTTTGG+TGG + chr7_4:56947573-56947592 Msa1165090:CDS 25.0%
!!! ATACCTTAGTAATTTTTGGT+GGG + chr7_4:56947574-56947593 Msa1165090:CDS 25.0%
!!! GTTTTAACTTATCAGAACTA+TGG + chr7_4:56947717-56947736 Msa1165090:intron 25.0%
!! TTTTTCTTTAATATCTAGGG+AGG + chr7_4:56947755-56947774 Msa1165090:intron 25.0%
! TCATCAAACAATGTTCTATA+AGG - chr7_4:56947817-56947836 None:intergenic 25.0%
!! CATCTTTGTTTATGCAATAT+TGG + chr7_4:56947838-56947857 Msa1165090:intron 25.0%
!!! AGTTTTTTTCCTCTTTTGAA+TGG - chr7_4:56947874-56947893 None:intergenic 25.0%
! TGTTCTAACTAAGTAATAAC+TGG + chr7_4:56947918-56947937 Msa1165090:intron 25.0%
!! GATTTAAATTTTCTGCATTG+AGG + chr7_4:56948298-56948317 Msa1165090:intron 25.0%
!! TAGGAATATTTTGTATAGTG+TGG - chr7_4:56948333-56948352 None:intergenic 25.0%
! AACCAAATAAGTGTGTATTT+AGG + chr7_4:56948423-56948442 Msa1165090:intron 25.0%
!! TGGATTTTGTAAAATTGGTT+TGG + chr7_4:56948478-56948497 Msa1165090:intron 25.0%
!!! GATTTCAAGTCTTTTAAACA+TGG + chr7_4:56948702-56948721 Msa1165090:intron 25.0%
!!! TTTACCCATTTTAGAAGATT+GGG - chr7_4:56948880-56948899 None:intergenic 25.0%
!!! TTTTACCCATTTTAGAAGAT+TGG - chr7_4:56948881-56948900 None:intergenic 25.0%
! ACATATATGTTCAACATTAG+TGG + chr7_4:56948901-56948920 Msa1165090:intron 25.0%
!! TCTATAGTTTTTATTCCACA+AGG - chr7_4:56949000-56949019 None:intergenic 25.0%
!! AATACTTTTATTCCCTCATA+AGG - chr7_4:56949155-56949174 None:intergenic 25.0%
! TTAAGTTCCGAAAATATTAC+AGG - chr7_4:56949178-56949197 None:intergenic 25.0%
!!! ATTCTTGTTTTGTTTATGGA+TGG + chr7_4:56949341-56949360 Msa1165090:intron 25.0%
!! AATAATTGCTTCTGAAAGAT+TGG + chr7_4:56949394-56949413 Msa1165090:intron 25.0%
!!! TGTGAATTTACTGATTTTTC+TGG + chr7_4:56949525-56949544 Msa1165090:intron 25.0%
!!! GTGAATTTACTGATTTTTCT+GGG + chr7_4:56949526-56949545 Msa1165090:intron 25.0%
! ATTAAAATGTCTGTCATTAC+AGG + chr7_4:56949822-56949841 Msa1165090:intron 25.0%
! TTAAAATGTCTGTCATTACA+GGG + chr7_4:56949823-56949842 Msa1165090:intron 25.0%
! TTGGTTGTAAGTTCATATAA+TGG + chr7_4:56949853-56949872 Msa1165090:CDS 25.0%
!!! TTCAATTATTTTGGATTGCA+AGG - chr7_4:56950053-56950072 None:intergenic 25.0%
! AAAAAACTGCTTCATAAAAC+TGG - chr7_4:56950240-56950259 None:intergenic 25.0%
!! TCTAACAAGATTCATTTTCT+TGG + chr7_4:56950334-56950353 Msa1165090:intron 25.0%
! TACAATTTAGATTCTCTGAA+AGG - chr7_4:56950508-56950527 None:intergenic 25.0%
! TCAGAGAATCTAAATTGTAT+TGG + chr7_4:56950509-56950528 Msa1165090:intron 25.0%
! ACCTTTCATTTGCATTAATA+AGG + chr7_4:56950606-56950625 Msa1165090:intron 25.0%
! TAAAAGTAGTTACCTTGTAA+AGG - chr7_4:56950922-56950941 None:intergenic 25.0%
! CTGAATAGATAATAAACACA+AGG - chr7_4:56951111-56951130 None:intergenic 25.0%
! GGATTAACTCATTTAATTGT+TGG - chr7_4:56951529-56951548 None:intergenic 25.0%
! CAAATAATTCTTTGCAAAAC+TGG + chr7_4:56951570-56951589 Msa1165090:intron 25.0%
! ACTCTACTATATGATAAGTT+AGG + chr7_4:56951647-56951666 Msa1165090:intron 25.0%
! CTATATGATAAGTTAGGTAT+TGG + chr7_4:56951653-56951672 Msa1165090:intron 25.0%
!! CTGACTTTGATTTAAAATTG+TGG + chr7_4:56951710-56951729 Msa1165090:intron 25.0%
AAGAGATTTAGTTGGAGAAT+TGG - chr7_4:56943212-56943231 None:intergenic 30.0%
TCTCTATAGCTTATATCAAC+AGG + chr7_4:56943264-56943283 Msa1165090:CDS 30.0%
TGATCCGTGTTATGAAAATT+AGG + chr7_4:56943536-56943555 Msa1165090:intron 30.0%
!!! CTGAAATTTTGGTTTTCGTT+AGG + chr7_4:56943650-56943669 Msa1165090:intron 30.0%
!!! GCTTTTCAGGTAAGTTATTT+TGG + chr7_4:56943842-56943861 Msa1165090:intron 30.0%
TCAAATAAGCTAATCCAAAC+AGG + chr7_4:56943968-56943987 Msa1165090:intron 30.0%
ATCAAGTAAAACATATGAGC+TGG - chr7_4:56944080-56944099 None:intergenic 30.0%
! TTTGTTGTGTTATCGTTCTA+TGG + chr7_4:56944210-56944229 Msa1165090:intron 30.0%
TTGATCAATGAAACGAATCA+AGG - chr7_4:56944256-56944275 None:intergenic 30.0%
GTTTAAAAAGCAAACAAACC+TGG - chr7_4:56944370-56944389 None:intergenic 30.0%
ATAGTAACAGCACATAAAAG+CGG - chr7_4:56944406-56944425 None:intergenic 30.0%
ACCTTTATCTTCTATGGATT+TGG + chr7_4:56944439-56944458 Msa1165090:intron 30.0%
TCCAAATCCATAGAAGATAA+AGG - chr7_4:56944443-56944462 None:intergenic 30.0%
TCTCACCATTAAAACTCATT+GGG - chr7_4:56944559-56944578 None:intergenic 30.0%
ATCTCACCATTAAAACTCAT+TGG - chr7_4:56944560-56944579 None:intergenic 30.0%
ATGTTTAAATCCAACATGAG+AGG - chr7_4:56944595-56944614 None:intergenic 30.0%
ATGTTGGATTTAAACATGAG+AGG + chr7_4:56944598-56944617 Msa1165090:intron 30.0%
! TTTGCATTGATATGGAATTC+TGG + chr7_4:56944643-56944662 Msa1165090:intron 30.0%
! TATTTTCACAAAAAGACGCA+TGG - chr7_4:56944884-56944903 None:intergenic 30.0%
! GCGTCTTTTTGTGAAAATAT+TGG + chr7_4:56944885-56944904 Msa1165090:CDS 30.0%
TTCATTTGAACGTCTATTAC+AGG - chr7_4:56945053-56945072 None:intergenic 30.0%
!! AATACTGAGTCTTGTTCTTT+CGG + chr7_4:56945098-56945117 Msa1165090:intron 30.0%
! CACGATATGGTTTTCATTAT+TGG + chr7_4:56945212-56945231 Msa1165090:intron 30.0%
!!! TATTTTGGCCAATAGAATTC+GGG + chr7_4:56945255-56945274 Msa1165090:intron 30.0%
TTAGTTGCATGAATTGTTTG+CGG - chr7_4:56945317-56945336 None:intergenic 30.0%
! ATTTCTAAAGATCAAACCCT+TGG - chr7_4:56945392-56945411 None:intergenic 30.0%
TGACAACAAAAATGGAGAAT+AGG - chr7_4:56945478-56945497 None:intergenic 30.0%
AGACATTGGAAACAAAGAAA+CGG - chr7_4:56945522-56945541 None:intergenic 30.0%
TTGAACCAGTAATTGAGAAT+GGG + chr7_4:56945579-56945598 Msa1165090:CDS 30.0%
! AACTTGATTTCCATTTTCAG+AGG - chr7_4:56945633-56945652 None:intergenic 30.0%
TCTGAAAATGGAAATCAAGT+TGG + chr7_4:56945632-56945651 Msa1165090:CDS 30.0%
ACAGGATAAAGATGTTGTTA+TGG + chr7_4:56945658-56945677 Msa1165090:CDS 30.0%
GATAAAGATGTTGTTATGGA+AGG + chr7_4:56945662-56945681 Msa1165090:CDS 30.0%
! ATATATGGTGGAAATCACAA+TGG + chr7_4:56945896-56945915 Msa1165090:CDS 30.0%
CATGAAGATCACTAAGATAA+CGG - chr7_4:56945922-56945941 None:intergenic 30.0%
! ATGGAAACAAATACAGGTTT+TGG + chr7_4:56946142-56946161 Msa1165090:intron 30.0%
TATAAGCAATCGACAAGAAA+TGG - chr7_4:56946300-56946319 None:intergenic 30.0%
!! GTTATAATTCTTTTAGGGGT+TGG + chr7_4:56946454-56946473 Msa1165090:intron 30.0%
TGTGCTTAAATGAAAATGTG+AGG + chr7_4:56946486-56946505 Msa1165090:intron 30.0%
GAGATCAAATTGATGAACTA+AGG - chr7_4:56946721-56946740 None:intergenic 30.0%
!!! ACTGCTGTTTTTTGTATTGT+TGG + chr7_4:56946796-56946815 Msa1165090:intron 30.0%
TTTGTGATTGCAACTAAGTA+TGG + chr7_4:56946829-56946848 Msa1165090:intron 30.0%
TTGTGATTGCAACTAAGTAT+GGG + chr7_4:56946830-56946849 Msa1165090:intron 30.0%
ATGCTTATAAAAAGGACAGA+GGG - chr7_4:56946997-56947016 None:intergenic 30.0%
TTTGAAAGGGGCTTATAATT+AGG + chr7_4:56947207-56947226 Msa1165090:intron 30.0%
ATGTGCATTTCTATAACAAG+AGG + chr7_4:56947269-56947288 Msa1165090:intron 30.0%
! GGGAATACCTTAGTAATTTT+TGG + chr7_4:56947570-56947589 Msa1165090:CDS 30.0%
AGAGGAAAAAAACTTGAGAA+TGG + chr7_4:56947880-56947899 Msa1165090:intron 30.0%
CTCCAAAGATAAGTAAGTAT+CGG - chr7_4:56947998-56948017 None:intergenic 30.0%
GATACTTACTTATCTTTGGA+GGG + chr7_4:56947997-56948016 Msa1165090:CDS 30.0%
! ATACTTACTTATCTTTGGAG+GGG + chr7_4:56947998-56948017 Msa1165090:CDS 30.0%
ATGTAAATCATTGTAGCAAG+TGG - chr7_4:56948033-56948052 None:intergenic 30.0%
AATTCCTGCAAACAATTAGA+TGG - chr7_4:56948129-56948148 None:intergenic 30.0%
CACCTAAATACACACTTATT+TGG - chr7_4:56948428-56948447 None:intergenic 30.0%
!! AAAATAGCTTTTGCATTGGT+TGG - chr7_4:56948590-56948609 None:intergenic 30.0%
AATAACTGACAATGGAAGTA+TGG - chr7_4:56948807-56948826 None:intergenic 30.0%
! GTAATCCCTTTTACTGTTTA+AGG + chr7_4:56948953-56948972 Msa1165090:intron 30.0%
GAGTACCTTAAACAGTAAAA+GGG - chr7_4:56948961-56948980 None:intergenic 30.0%
! AGAGTACCTTAAACAGTAAA+AGG - chr7_4:56948962-56948981 None:intergenic 30.0%
TTTGATAAGTTATAGGTCCT+GGG - chr7_4:56949220-56949239 None:intergenic 30.0%
AGATCATTGATGCTAACAAT+TGG + chr7_4:56949305-56949324 Msa1165090:intron 30.0%
GATCATTGATGCTAACAATT+GGG + chr7_4:56949306-56949325 Msa1165090:intron 30.0%
! TTAGATTGGTTAATAGCTTC+TGG + chr7_4:56949427-56949446 Msa1165090:intron 30.0%
!! AATTTATCTACTCTAAGGTG+TGG + chr7_4:56949492-56949511 Msa1165090:intron 30.0%
! CTGGGATTTTATGACATTTT+TGG + chr7_4:56949544-56949563 Msa1165090:intron 30.0%
! GAAGATGTACTTGTATCTTT+TGG + chr7_4:56949877-56949896 Msa1165090:CDS 30.0%
TGTTGTATAAGAGTTATCCA+CGG - chr7_4:56950182-56950201 None:intergenic 30.0%
GAGAATCTAAATTGTATTGG+AGG + chr7_4:56950512-56950531 Msa1165090:intron 30.0%
! GCCTTATTAATGCAAATGAA+AGG - chr7_4:56950610-56950629 None:intergenic 30.0%
AATGGCACAAATGCATAAAA+TGG - chr7_4:56950718-56950737 None:intergenic 30.0%
!!! TGCCATTTTATTTTCTATCC+TGG + chr7_4:56950731-56950750 Msa1165090:intron 30.0%
TGCCAGGATAGAAAATAAAA+TGG - chr7_4:56950736-56950755 None:intergenic 30.0%
AGTACCTGCTTTAATATTTC+TGG + chr7_4:56950755-56950774 Msa1165090:intron 30.0%
GATACCAGAAATATTAAAGC+AGG - chr7_4:56950762-56950781 None:intergenic 30.0%
TAATAACTCTGACCTTTACA+AGG + chr7_4:56950907-56950926 Msa1165090:CDS 30.0%
! ATTTTGGATTTAGTCCAGAA+TGG + chr7_4:56950961-56950980 Msa1165090:intron 30.0%
TATGATTCTTAGATCCATTC+TGG - chr7_4:56950978-56950997 None:intergenic 30.0%
!!! GCGTGTTTTTTAATAGAATC+TGG + chr7_4:56951421-56951440 Msa1165090:intron 30.0%
ACTTATCATATAGTAGAGTC+AGG - chr7_4:56951646-56951665 None:intergenic 30.0%
AGATTAGATCACAACAATGA+AGG - chr7_4:56951686-56951705 None:intergenic 30.0%
AAATATATATTTGAGTGCGC+AGG + chr7_4:56951814-56951833 Msa1165090:intron 30.0%
AATACAGTCATCAGCAAAAA+TGG - chr7_4:56952212-56952231 None:intergenic 30.0%
TAAGCTATAGAGAAGAAGAG+CGG - chr7_4:56943257-56943276 None:intergenic 35.0%
CAATGCAGGTAAAAGGAAAA+AGG - chr7_4:56943295-56943314 None:intergenic 35.0%
! CACGCCTAATTTTCATAACA+CGG - chr7_4:56943543-56943562 None:intergenic 35.0%
TAATTGCTTCCGACTGATTA+AGG + chr7_4:56943598-56943617 Msa1165090:intron 35.0%
! GCAAGTTTTCCTTAATCAGT+CGG - chr7_4:56943610-56943629 None:intergenic 35.0%
GGAGTGATTATGGAAATAAG+CGG + chr7_4:56943863-56943882 Msa1165090:intron 35.0%
TAGGCACTTGTGAAACTATT+TGG - chr7_4:56943933-56943952 None:intergenic 35.0%
TTGAACTTACCTACTGACAT+AGG - chr7_4:56943952-56943971 None:intergenic 35.0%
CTACAACAACTACAAGCTTA+TGG - chr7_4:56943995-56944014 None:intergenic 35.0%
AGATGAAGTGCACTGAATTA+CGG + chr7_4:56944042-56944061 Msa1165090:intron 35.0%
ATCGTTCTATGGAATTGAAG+TGG + chr7_4:56944221-56944240 Msa1165090:intron 35.0%
!! CGTGCTTAATTTGTCATTTC+AGG + chr7_4:56944278-56944297 Msa1165090:intron 35.0%
! TCCACAATTTTCCATGAACT+GGG - chr7_4:56944333-56944352 None:intergenic 35.0%
AAATTGTGGAGCATAGCAAA+TGG + chr7_4:56944343-56944362 Msa1165090:CDS 35.0%
AATTGTGGAGCATAGCAAAT+GGG + chr7_4:56944344-56944363 Msa1165090:CDS 35.0%
! TCTTGTTTGAATCCAACATG+AGG + chr7_4:56944465-56944484 Msa1165090:intron 35.0%
CTTGTTTGAATCCAACATGA+GGG + chr7_4:56944466-56944485 Msa1165090:intron 35.0%
TGAAAATAACACCCTCATGT+TGG - chr7_4:56944480-56944499 None:intergenic 35.0%
TGAACATAATCCTCTCATGT+TGG + chr7_4:56944582-56944601 Msa1165090:intron 35.0%
TTAACAATATTCTCGAGAGC+AGG - chr7_4:56944806-56944825 None:intergenic 35.0%
! TTGGTAATTACTGATGCAGT+TGG + chr7_4:56944827-56944846 Msa1165090:intron 35.0%
! GGAGTTGTACTTATGCTTTT+TGG + chr7_4:56945119-56945138 Msa1165090:intron 35.0%
!!! TGTACTTATGCTTTTTGGCT+TGG + chr7_4:56945124-56945143 Msa1165090:intron 35.0%
!! ATTTTGGCCAATAGAATTCG+GGG + chr7_4:56945256-56945275 Msa1165090:intron 35.0%
TACAATACCCCGAATTCTAT+TGG - chr7_4:56945266-56945285 None:intergenic 35.0%
TAGTTGCATGAATTGTTTGC+GGG - chr7_4:56945316-56945335 None:intergenic 35.0%
ATTCATGCAACTAAGATAGC+TGG + chr7_4:56945323-56945342 Msa1165090:intron 35.0%
TTCATGCAACTAAGATAGCT+GGG + chr7_4:56945324-56945343 Msa1165090:intron 35.0%
ATTTCATGATATGGCACCAA+GGG + chr7_4:56945373-56945392 Msa1165090:intron 35.0%
GACATTGGAAACAAAGAAAC+GGG - chr7_4:56945521-56945540 None:intergenic 35.0%
AGAAAGGTAGAATCAGACAT+TGG - chr7_4:56945536-56945555 None:intergenic 35.0%
AATGTCTGATTCTACCTTTC+TGG + chr7_4:56945535-56945554 Msa1165090:intron 35.0%
!! CTCAATTACTGGTTCAACTT+TGG - chr7_4:56945576-56945595 None:intergenic 35.0%
GTTGAACCAGTAATTGAGAA+TGG + chr7_4:56945578-56945597 Msa1165090:CDS 35.0%
! GAGGAAATAGTTTTTGTCTC+TGG - chr7_4:56945614-56945633 None:intergenic 35.0%
AAATAAACGCACTTGGCTTA+GGG - chr7_4:56945837-56945856 None:intergenic 35.0%
TATGTCACTACAGATTGCAT+GGG + chr7_4:56946349-56946368 Msa1165090:intron 35.0%
AGTTACAGTGTATTTCTCCT+CGG + chr7_4:56946751-56946770 Msa1165090:intron 35.0%
GAACTAGAGTTATAAAACCG+AGG - chr7_4:56946771-56946790 None:intergenic 35.0%
TTGATCTACAAAGAGCAACA+TGG + chr7_4:56946886-56946905 Msa1165090:intron 35.0%
GATGCTTATAAAAAGGACAG+AGG - chr7_4:56946998-56947017 None:intergenic 35.0%
GGCTTATAATTAGGTAGAGA+GGG + chr7_4:56947216-56947235 Msa1165090:intron 35.0%
AAATGAAAGGAGAAGAGAGA+GGG - chr7_4:56947316-56947335 None:intergenic 35.0%
AAAATGAAAGGAGAAGAGAG+AGG - chr7_4:56947317-56947336 None:intergenic 35.0%
! AAGCATACATGATGGAAGAA+GGG - chr7_4:56947391-56947410 None:intergenic 35.0%
! AAAGCATACATGATGGAAGA+AGG - chr7_4:56947392-56947411 None:intergenic 35.0%
TTCCATCATGTATGCTTTCT+AGG + chr7_4:56947394-56947413 Msa1165090:intron 35.0%
! TACCTAGAAAGCATACATGA+TGG - chr7_4:56947399-56947418 None:intergenic 35.0%
TATGCTTTCTAGGTATCACT+TGG + chr7_4:56947404-56947423 Msa1165090:intron 35.0%
ATGCTTTCTAGGTATCACTT+GGG + chr7_4:56947405-56947424 Msa1165090:intron 35.0%
GTGAAAAAAGGGTCACAAAT+TGG - chr7_4:56947432-56947451 None:intergenic 35.0%
AAGCATCACATGACAAATGA+GGG - chr7_4:56947512-56947531 None:intergenic 35.0%
! AAAGCATCACATGACAAATG+AGG - chr7_4:56947513-56947532 None:intergenic 35.0%
TTGCCCACCAAAAATTACTA+AGG - chr7_4:56947580-56947599 None:intergenic 35.0%
CCATGAAGATAGAATTGCTT+CGG - chr7_4:56947692-56947711 None:intergenic 35.0%
ATATCTAGGGAGGACTTTAA+TGG + chr7_4:56947765-56947784 Msa1165090:intron 35.0%
TTTCTCTGACCATTCAAAAG+AGG + chr7_4:56947862-56947881 Msa1165090:intron 35.0%
AACTAAGTAATAACTGGCAG+CGG + chr7_4:56947924-56947943 Msa1165090:intron 35.0%
GACCGATACTTACTTATCTT+TGG + chr7_4:56947993-56948012 Msa1165090:CDS 35.0%
CGATACTTACTTATCTTTGG+AGG + chr7_4:56947996-56948015 Msa1165090:CDS 35.0%
! TACTTACTTATCTTTGGAGG+GGG + chr7_4:56947999-56948018 Msa1165090:CDS 35.0%
CAAACAATTAGATGGAGTCT+CGG - chr7_4:56948121-56948140 None:intergenic 35.0%
TAAACCATTTGATGTACACG+CGG + chr7_4:56948375-56948394 Msa1165090:intron 35.0%
TATTACTTCAAGTCAAACCG+AGG + chr7_4:56948611-56948630 Msa1165090:intron 35.0%
! ATACTTTTGCCTACAAACCT+CGG - chr7_4:56948631-56948650 None:intergenic 35.0%
AGTACTGTACCATCAATTAC+TGG + chr7_4:56948775-56948794 Msa1165090:intron 35.0%
ATATGTGTATCTCGACGTAT+AGG + chr7_4:56948839-56948858 Msa1165090:intron 35.0%
! CGTATAGGTTTGTTCACTAA+TGG + chr7_4:56948854-56948873 Msa1165090:intron 35.0%
! AATGGCCCAATCTTCTAAAA+TGG + chr7_4:56948872-56948891 Msa1165090:intron 35.0%
!! ATGGCCCAATCTTCTAAAAT+GGG + chr7_4:56948873-56948892 Msa1165090:intron 35.0%
! TGTTTAAGGTACTCTTGTTC+AGG + chr7_4:56948967-56948986 Msa1165090:intron 35.0%
!! TCCTGGGTCATTTTAAATCT+AGG - chr7_4:56949204-56949223 None:intergenic 35.0%
CTTTGATAAGTTATAGGTCC+TGG - chr7_4:56949221-56949240 None:intergenic 35.0%
CAGGACCTATAACTTATCAA+AGG + chr7_4:56949219-56949238 Msa1165090:intron 35.0%
!! TGGATGGAGAACTACTTTTA+AGG + chr7_4:56949357-56949376 Msa1165090:intron 35.0%
AATCAGTAAATTCACAACCC+AGG - chr7_4:56949521-56949540 None:intergenic 35.0%
!! TATACTCCTTGTTATTCTGC+AGG + chr7_4:56949605-56949624 Msa1165090:intron 35.0%
!! ATACTCCTTGTTATTCTGCA+GGG + chr7_4:56949606-56949625 Msa1165090:intron 35.0%
! GATGTACTTGTATCTTTTGG+AGG + chr7_4:56949880-56949899 Msa1165090:CDS 35.0%
!! GTATCTTTTGGAGGATACAA+TGG + chr7_4:56949889-56949908 Msa1165090:CDS 35.0%
! AGGACATGAAGGGAAAATTT+TGG + chr7_4:56950150-56950169 Msa1165090:CDS 35.0%
!! GAAAATTTTGGAAATTGCCG+TGG + chr7_4:56950162-56950181 Msa1165090:CDS 35.0%
! AAGCTTTTAGATCCTCTGAA+AGG - chr7_4:56950442-56950461 None:intergenic 35.0%
AAATGACTCGATGACAGATT+TGG - chr7_4:56950581-56950600 None:intergenic 35.0%
GGTATCATACAGAAATCCAA+AGG + chr7_4:56950776-56950795 Msa1165090:intron 35.0%
ACTAGAATCATCACTCAGTA+AGG + chr7_4:56950835-56950854 Msa1165090:CDS 35.0%
AAGGTCAGAGTTATTAGACT+CGG - chr7_4:56950903-56950922 None:intergenic 35.0%
!! TTTCTAGAGCTTTGAGTTGT+AGG + chr7_4:56951079-56951098 Msa1165090:intron 35.0%
!! TTCTAGAGCTTTGAGTTGTA+GGG + chr7_4:56951080-56951099 Msa1165090:intron 35.0%
! AAACACTTTCTTTTGTCTCC+TGG + chr7_4:56951139-56951158 Msa1165090:intron 35.0%
TTGTCAGGGCACAAAATATA+AGG - chr7_4:56951289-56951308 None:intergenic 35.0%
TAGGTTAGTAGTCAGATGAA+TGG - chr7_4:56951491-56951510 None:intergenic 35.0%
ATCACAACAATGAAGGATTC+AGG - chr7_4:56951679-56951698 None:intergenic 35.0%
TTCATTCATCATCTGCATTC+TGG - chr7_4:56952003-56952022 None:intergenic 35.0%
! ATTGTTGTTCAGTTAAGCCA+AGG - chr7_4:56952026-56952045 None:intergenic 35.0%
CTGAACAACAATGCTTCATT+TGG + chr7_4:56952034-56952053 Msa1165090:three_prime_UTR 35.0%
! AGATTTAGCTTCTATTTGGG+CGG + chr7_4:56952128-56952147 Msa1165090:three_prime_UTR 35.0%
! AGGAAAATTTTCCACACATG+AGG + chr7_4:56952151-56952170 Msa1165090:three_prime_UTR 35.0%
CATACTATAATCCTCATGTG+TGG - chr7_4:56952165-56952184 None:intergenic 35.0%
! CTGGTTTGCAATATCCAGAA+CGG + chr7_4:56943149-56943168 Msa1165090:CDS 40.0%
CAAAAAACGCAATGCAATGC+AGG - chr7_4:56943309-56943328 None:intergenic 40.0%
CGTGTTATGAAAATTAGGCG+TGG + chr7_4:56943541-56943560 Msa1165090:intron 40.0%
! TTTTCGTTAGGAGTCAACAG+CGG + chr7_4:56943662-56943681 Msa1165090:intron 40.0%
ATGATCACTCGGTCTGATAT+AGG + chr7_4:56943699-56943718 Msa1165090:intron 40.0%
GGTCTGATATAGGATCTGTT+TGG + chr7_4:56943709-56943728 Msa1165090:intron 40.0%
TACAAGCTTATGGACCTGTT+TGG - chr7_4:56943985-56944004 None:intergenic 40.0%
GTTGTTGTAGCACTTGACAT+TGG + chr7_4:56944005-56944024 Msa1165090:intron 40.0%
AGTGCACTTCATCTGAATGT+AGG - chr7_4:56944036-56944055 None:intergenic 40.0%
! TTGTCATTTCAGGCTAGTGT+AGG + chr7_4:56944288-56944307 Msa1165090:intron 40.0%
! TTTTCCATGAACTGGGTTCT+GGG - chr7_4:56944326-56944345 None:intergenic 40.0%
! ATTTTCCATGAACTGGGTTC+TGG - chr7_4:56944327-56944346 None:intergenic 40.0%
ACCCAGTTCATGGAAAATTG+TGG + chr7_4:56944329-56944348 Msa1165090:CDS 40.0%
! CTCCACAATTTTCCATGAAC+TGG - chr7_4:56944334-56944353 None:intergenic 40.0%
AATATTCTCGAGAGCAGGAA+TGG - chr7_4:56944801-56944820 None:intergenic 40.0%
AGTACTTACTGAGCACGATA+TGG + chr7_4:56945199-56945218 Msa1165090:intron 40.0%
GATTTCATGATATGGCACCA+AGG + chr7_4:56945372-56945391 Msa1165090:intron 40.0%
!! CTGATTCTACCTTTCTGGTT+TGG + chr7_4:56945540-56945559 Msa1165090:intron 40.0%
ATTATGCTGCCAAACCAGAA+AGG - chr7_4:56945552-56945571 None:intergenic 40.0%
GTGTTCCCATTCTCAATTAC+TGG - chr7_4:56945587-56945606 None:intergenic 40.0%
!! TGGAAATCAAGTTGGAACAC+AGG + chr7_4:56945640-56945659 Msa1165090:CDS 40.0%
GATGTTGTTATGGAAGGCTT+TGG + chr7_4:56945668-56945687 Msa1165090:CDS 40.0%
CAGTTGGAGTCTATGATCAA+TGG + chr7_4:56945693-56945712 Msa1165090:CDS 40.0%
TTTGGACGTTGACCAGATAT+TGG - chr7_4:56945728-56945747 None:intergenic 40.0%
! AAAACCTCATATCGGGCTTT+TGG - chr7_4:56945746-56945765 None:intergenic 40.0%
! AAAAGCCCGATATGAGGTTT+TGG + chr7_4:56945745-56945764 Msa1165090:intron 40.0%
AAGAGCCAAAACCTCATATC+GGG - chr7_4:56945753-56945772 None:intergenic 40.0%
CAAGAGCCAAAACCTCATAT+CGG - chr7_4:56945754-56945773 None:intergenic 40.0%
CAAATAAACGCACTTGGCTT+AGG - chr7_4:56945838-56945857 None:intergenic 40.0%
GCTGAACAAATAAACGCACT+TGG - chr7_4:56945844-56945863 None:intergenic 40.0%
GTGCGTTTATTTGTTCAGCA+TGG + chr7_4:56945845-56945864 Msa1165090:intron 40.0%
!!! AGGTTTTGGATTTGAGAAGC+TGG + chr7_4:56946156-56946175 Msa1165090:intron 40.0%
TTGGTCAAAGCTTGAGGTTA+AGG + chr7_4:56946181-56946200 Msa1165090:CDS 40.0%
ACATGGATCCAAAGTTGTAG+AGG - chr7_4:56946219-56946238 None:intergenic 40.0%
CTATGTCACTACAGATTGCA+TGG + chr7_4:56946348-56946367 Msa1165090:intron 40.0%
ATGTCACTACAGATTGCATG+GGG + chr7_4:56946350-56946369 Msa1165090:intron 40.0%
AATAAGCTCCTGTCAATTGC+CGG + chr7_4:56946374-56946393 Msa1165090:CDS 40.0%
! TTTCGGAAGGATCTTTTGTG+TGG - chr7_4:56946400-56946419 None:intergenic 40.0%
ATACCTTGGATACTTTCGGA+AGG - chr7_4:56946413-56946432 None:intergenic 40.0%
! TGGTCAACTCTAAAGACCTA+TGG + chr7_4:56946906-56946925 Msa1165090:intron 40.0%
! GGTCAACTCTAAAGACCTAT+GGG + chr7_4:56946907-56946926 Msa1165090:intron 40.0%
ACATAATAGACACATACCGG+AGG - chr7_4:56946936-56946955 None:intergenic 40.0%
GGGCTTATAATTAGGTAGAG+AGG + chr7_4:56947215-56947234 Msa1165090:intron 40.0%
!! GTAGAGAGGGAGTATCATTT+AGG + chr7_4:56947229-56947248 Msa1165090:intron 40.0%
! AGCATACATGATGGAAGAAG+GGG - chr7_4:56947390-56947409 None:intergenic 40.0%
TGCTTTCTAGGTATCACTTG+GGG + chr7_4:56947406-56947425 Msa1165090:intron 40.0%
GACAAATGAGGGAACTAAAC+AGG - chr7_4:56947501-56947520 None:intergenic 40.0%
GATGCTTTGTAGATATCACG+TGG + chr7_4:56947525-56947544 Msa1165090:intron 40.0%
! TACTAAGGTATTCCCGACAA+GGG - chr7_4:56947565-56947584 None:intergenic 40.0%
! TTACTAAGGTATTCCCGACA+AGG - chr7_4:56947566-56947585 None:intergenic 40.0%
CTTGAATGACCTGCATATTC+TGG + chr7_4:56947617-56947636 Msa1165090:CDS 40.0%
TTTCCAAGTCCAGAATATGC+AGG - chr7_4:56947629-56947648 None:intergenic 40.0%
ATCAATTTCGTCCCATGTCA+TGG - chr7_4:56947652-56947671 None:intergenic 40.0%
CCGAAGCAATTCTATCTTCA+TGG + chr7_4:56947689-56947708 Msa1165090:intron 40.0%
ACTTATCAGAACTATGGGAG+AGG + chr7_4:56947723-56947742 Msa1165090:intron 40.0%
CTTATCAGAACTATGGGAGA+GGG + chr7_4:56947724-56947743 Msa1165090:intron 40.0%
TTATCAGAACTATGGGAGAG+GGG + chr7_4:56947725-56947744 Msa1165090:intron 40.0%
! AGGGAGGACTTTAATGGTTT+TGG + chr7_4:56947771-56947790 Msa1165090:intron 40.0%
! GGGAGGACTTTAATGGTTTT+GGG + chr7_4:56947772-56947791 Msa1165090:intron 40.0%
CTTCATAACTGATCAGGCAA+TGG - chr7_4:56948080-56948099 None:intergenic 40.0%
TTGCCTGATCAGTTATGAAG+TGG + chr7_4:56948080-56948099 Msa1165090:intron 40.0%
AGTCCACTTCATAACTGATC+AGG - chr7_4:56948086-56948105 None:intergenic 40.0%
TGATCAGTTATGAAGTGGAC+TGG + chr7_4:56948085-56948104 Msa1165090:intron 40.0%
GACTCCATCTAATTGTTTGC+AGG + chr7_4:56948122-56948141 Msa1165090:intron 40.0%
! GTTTGCAGGAATTTTGCAGA+TGG + chr7_4:56948136-56948155 Msa1165090:intron 40.0%
! CAGGAATTTTGCAGATGGAA+TGG + chr7_4:56948141-56948160 Msa1165090:intron 40.0%
!! TTTAGTTTGACCCACAGCAT+AGG - chr7_4:56948405-56948424 None:intergenic 40.0%
CTGTACCATCAATTACTGGT+TGG + chr7_4:56948779-56948798 Msa1165090:intron 40.0%
TGGAACCAACCAGTAATTGA+TGG - chr7_4:56948787-56948806 None:intergenic 40.0%
AATGTAGAGCGAGATTCAAG+TGG + chr7_4:56948927-56948946 Msa1165090:intron 40.0%
TGTTCAGGAAAAACACCTTG+TGG + chr7_4:56948982-56949001 Msa1165090:intron 40.0%
!! AACGCGTTGATAACTCAAAC+AGG - chr7_4:56949075-56949094 None:intergenic 40.0%
TCCCTCATAAGGCAATTGAT+GGG - chr7_4:56949144-56949163 None:intergenic 40.0%
TTCCCTCATAAGGCAATTGA+TGG - chr7_4:56949145-56949164 None:intergenic 40.0%
! GCCTAGATTTAAAATGACCC+AGG + chr7_4:56949200-56949219 Msa1165090:intron 40.0%
!! TACTCCTTGTTATTCTGCAG+GGG + chr7_4:56949607-56949626 Msa1165090:intron 40.0%
AGAGACGGTTGTACTGAATA+TGG + chr7_4:56949634-56949653 Msa1165090:CDS 40.0%
TCAGTGGTAACATCTGTTCA+AGG + chr7_4:56949671-56949690 Msa1165090:CDS 40.0%
CAGTGGTAACATCTGTTCAA+GGG + chr7_4:56949672-56949691 Msa1165090:CDS 40.0%
AAGGATGCCTAATGACATCA+AGG - chr7_4:56949780-56949799 None:intergenic 40.0%
AGGGATAACAGAGCAGAAAT+GGG - chr7_4:56949954-56949973 None:intergenic 40.0%
AAGGGATAACAGAGCAGAAA+TGG - chr7_4:56949955-56949974 None:intergenic 40.0%
AGCGAGAATGACAAAGCAAA+GGG - chr7_4:56949973-56949992 None:intergenic 40.0%
!! TGATTTGACTTGCTGCTTTC+AGG + chr7_4:56949997-56950016 Msa1165090:intron 40.0%
AGCATTTGTAGCATTTGGGA+CGG - chr7_4:56950101-56950120 None:intergenic 40.0%
GGGTAGCATTTGTAGCATTT+GGG - chr7_4:56950105-56950124 None:intergenic 40.0%
AAATTCAGATCCTGTATCGC+GGG - chr7_4:56950125-56950144 None:intergenic 40.0%
CAAATTCAGATCCTGTATCG+CGG - chr7_4:56950126-56950145 None:intergenic 40.0%
! AATTTGGAGCAGGACATGAA+GGG + chr7_4:56950140-56950159 Msa1165090:CDS 40.0%
!!! GAAGCAGTTTTTTCCAGCAT+TGG + chr7_4:56950247-56950266 Msa1165090:intron 40.0%
ATTGCTAACACAACCAATGC+TGG - chr7_4:56950263-56950282 None:intergenic 40.0%
! TTTTCTTGGTTGCATGCCTT+TGG + chr7_4:56950348-56950367 Msa1165090:intron 40.0%
TGAAAGGCTATAAACAGAGG+AGG - chr7_4:56950426-56950445 None:intergenic 40.0%
! CTCTGAAAGGCTATAAACAG+AGG - chr7_4:56950429-56950448 None:intergenic 40.0%
CTCTGTTTATAGCCTTTCAG+AGG + chr7_4:56950427-56950446 Msa1165090:intron 40.0%
TGAAAGGCTATAAACAGAGG+AGG - chr7_4:56950426-56950445 None:intergenic 40.0%
! CTCTGAAAGGCTATAAACAG+AGG - chr7_4:56950429-56950448 None:intergenic 40.0%
GCACACAGAACTTGCATTTA+TGG + chr7_4:56950628-56950647 Msa1165090:intron 40.0%
GCGCATCATTTAAATGATGC+AGG - chr7_4:56950690-56950709 None:intergenic 40.0%
! ATATTAAAGCAGGTACTGCC+AGG - chr7_4:56950752-56950771 None:intergenic 40.0%
GACTGATATGAGATCACCTT+TGG - chr7_4:56950795-56950814 None:intergenic 40.0%
TGATCTCATATCAGTCCTGA+AGG + chr7_4:56950799-56950818 Msa1165090:CDS 40.0%
TCTTCAACTAAAGCAAGAGC+TGG + chr7_4:56950871-56950890 Msa1165090:CDS 40.0%
!! TCTTTTGTCTCCTGGTCTTT+TGG + chr7_4:56951147-56951166 Msa1165090:intron 40.0%
!! CTTTTGTCTCCTGGTCTTTT+GGG + chr7_4:56951148-56951167 Msa1165090:intron 40.0%
!! TTTTGTCTCCTGGTCTTTTG+GGG + chr7_4:56951149-56951168 Msa1165090:intron 40.0%
GTTGAGACGTAAGCAGAATA+AGG + chr7_4:56951179-56951198 Msa1165090:intron 40.0%
! ATTTTGTGCCCTGACAATGT+AGG + chr7_4:56951292-56951311 Msa1165090:intron 40.0%
! GTCAAGGTGTTTCAAACTTG+AGG + chr7_4:56951352-56951371 Msa1165090:CDS 40.0%
AGGTATGCATTCATGCTTCT+TGG + chr7_4:56951372-56951391 Msa1165090:intron 40.0%
ACGCTCACAAGTCATAAAGA+CGG - chr7_4:56951405-56951424 None:intergenic 40.0%
TTGGCTGTTGCTCTATGAAT+AGG - chr7_4:56951510-56951529 None:intergenic 40.0%
TATATATTTGAGTGCGCAGG+TGG + chr7_4:56951817-56951836 Msa1165090:intron 40.0%
! GGTCAGAAGCTCCAAAATTT+TGG + chr7_4:56951854-56951873 Msa1165090:CDS 40.0%
! CTGCTTTAAGTGCAAAACAG+AGG + chr7_4:56951933-56951952 Msa1165090:CDS 40.0%
TTTAAGTGCAAAACAGAGGC+AGG + chr7_4:56951937-56951956 Msa1165090:CDS 40.0%
TTAAGTGCAAAACAGAGGCA+GGG + chr7_4:56951938-56951957 Msa1165090:CDS 40.0%
TGCAGATGATGAATGAACCT+TGG + chr7_4:56952006-56952025 Msa1165090:exon 40.0%
GCTGATGACTGTATTCAAAG+TGG + chr7_4:56952217-56952236 Msa1165090:three_prime_UTR 40.0%
ATCAGAAATGTCGATGGCGA+TGG + chr7_4:56943114-56943133 Msa1165090:exon 45.0%
! GAAGAAGAGCGGTGGATTTA+GGG - chr7_4:56943246-56943265 None:intergenic 45.0%
! AGAAGAAGAGCGGTGGATTT+AGG - chr7_4:56943247-56943266 None:intergenic 45.0%
CGCAATGCAATGCAGGTAAA+AGG - chr7_4:56943302-56943321 None:intergenic 45.0%
AGTGATCATGTAGCCAATGG+TGG - chr7_4:56943688-56943707 None:intergenic 45.0%
! CCATTGGCTACATGATCACT+CGG + chr7_4:56943688-56943707 Msa1165090:intron 45.0%
TCACAAGTGCCTATGTCAGT+AGG + chr7_4:56943940-56943959 Msa1165090:intron 45.0%
ACTGTTCAAGCTTCAGCTTG+TGG + chr7_4:56944167-56944186 Msa1165090:intron 45.0%
!! TGGGGCCCAATGAGTTTTAA+TGG + chr7_4:56944551-56944570 Msa1165090:intron 45.0%
TGGAAGACATGTTTCCAAGC+TGG - chr7_4:56944855-56944874 None:intergenic 45.0%
AAAAAGACGCATGGCTTCTG+TGG - chr7_4:56944875-56944894 None:intergenic 45.0%
GTTGTGTAGGAAGAAGATCC+TGG + chr7_4:56944993-56945012 Msa1165090:intron 45.0%
TGTAGGAAGAAGATCCTGGT+TGG + chr7_4:56944997-56945016 Msa1165090:intron 45.0%
GATGCTCTTGAATACCAACC+AGG - chr7_4:56945014-56945033 None:intergenic 45.0%
! ATGGAAGGCTTTGGTTCAGT+TGG + chr7_4:56945677-56945696 Msa1165090:CDS 45.0%
TGGATTGCACCTCCAATATC+TGG + chr7_4:56945713-56945732 Msa1165090:CDS 45.0%
TGGATTTGAGAAGCTGGACT+TGG + chr7_4:56946162-56946181 Msa1165090:CDS 45.0%
TCAAAGCTTGAGGTTAAGGC+TGG + chr7_4:56946185-56946204 Msa1165090:CDS 45.0%
ACAACTTTGGATCCATGTGC+TGG + chr7_4:56946221-56946240 Msa1165090:CDS 45.0%
!! GATCCTTCCGAAAGTATCCA+AGG + chr7_4:56946407-56946426 Msa1165090:CDS 45.0%
TAGGGAAACTCAAAGTGCAG+AGG - chr7_4:56946594-56946613 None:intergenic 45.0%
TTTCCCTAGTTCAGAGACGA+AGG + chr7_4:56946606-56946625 Msa1165090:intron 45.0%
ACTCCTTCGTCTCTGAACTA+GGG - chr7_4:56946612-56946631 None:intergenic 45.0%
AACTCCTTCGTCTCTGAACT+AGG - chr7_4:56946613-56946632 None:intergenic 45.0%
AAAGACCTATGGGAAACCTC+CGG + chr7_4:56946917-56946936 Msa1165090:intron 45.0%
GCTTTGTAGATATCACGTGG+AGG + chr7_4:56947528-56947547 Msa1165090:intron 45.0%
TGACCTGCATATTCTGGACT+TGG + chr7_4:56947623-56947642 Msa1165090:CDS 45.0%
TGGACTTGGAAACCATGACA+TGG + chr7_4:56947637-56947656 Msa1165090:CDS 45.0%
GGACTTGGAAACCATGACAT+GGG + chr7_4:56947638-56947657 Msa1165090:CDS 45.0%
! GGAATCTCACCTTGTTGTGT+GGG - chr7_4:56948173-56948192 None:intergenic 45.0%
! TGGAATCTCACCTTGTTGTG+TGG - chr7_4:56948174-56948193 None:intergenic 45.0%
! GAGAACTGGTTCATTGTTGG+TGG + chr7_4:56948230-56948249 Msa1165090:CDS 45.0%
! AACTGGTTCATTGTTGGTGG+CGG + chr7_4:56948233-56948252 Msa1165090:CDS 45.0%
CAAGTCAAACCGAGGTTTGT+AGG + chr7_4:56948619-56948638 Msa1165090:intron 45.0%
! AATGGGTGTGTTGTTCTGTG+TGG + chr7_4:56949113-56949132 Msa1165090:intron 45.0%
TCCCCATCAATTGCCTTATG+AGG + chr7_4:56949139-56949158 Msa1165090:intron 45.0%
CCCTCATAAGGCAATTGATG+GGG - chr7_4:56949143-56949162 None:intergenic 45.0%
CCCCATCAATTGCCTTATGA+GGG + chr7_4:56949140-56949159 Msa1165090:intron 45.0%
!! TACTCTAAGGTGTGGTTACC+TGG + chr7_4:56949500-56949519 Msa1165090:intron 45.0%
!! ACTCTAAGGTGTGGTTACCT+GGG + chr7_4:56949501-56949520 Msa1165090:intron 45.0%
TGTACTGAATATGGCTACCC+TGG + chr7_4:56949643-56949662 Msa1165090:CDS 45.0%
ATCAAGGCGATAGCAACGAT+TGG - chr7_4:56949764-56949783 None:intergenic 45.0%
GCTATCGCCTTGATGTCATT+AGG + chr7_4:56949770-56949789 Msa1165090:intron 45.0%
GTTAATCAGTGGGCACTAGA+AGG - chr7_4:56949799-56949818 None:intergenic 45.0%
GTCATTACAGGGCTTGAGTT+TGG + chr7_4:56949834-56949853 Msa1165090:intron 45.0%
GGGATAACAGAGCAGAAATG+GGG - chr7_4:56949953-56949972 None:intergenic 45.0%
GAGCGAGAATGACAAAGCAA+AGG - chr7_4:56949974-56949993 None:intergenic 45.0%
!! TGGATTGCAAGGTCGATTTG+TGG - chr7_4:56950042-56950061 None:intergenic 45.0%
CGGGTAGCATTTGTAGCATT+TGG - chr7_4:56950106-56950125 None:intergenic 45.0%
CGCGATACAGGATCTGAATT+TGG + chr7_4:56950124-56950143 Msa1165090:CDS 45.0%
! ACAGGATCTGAATTTGGAGC+AGG + chr7_4:56950130-56950149 Msa1165090:CDS 45.0%
! GAATTTGGAGCAGGACATGA+AGG + chr7_4:56950139-56950158 Msa1165090:CDS 45.0%
!!! TCCTGGTCTTTTGGGGTAAT+CGG + chr7_4:56951156-56951175 Msa1165090:intron 45.0%
TTGGAGCTCCTACATTGTCA+GGG - chr7_4:56951303-56951322 None:intergenic 45.0%
ATTGGAGCTCCTACATTGTC+AGG - chr7_4:56951304-56951323 None:intergenic 45.0%
CGCTCACAAGTCATAAAGAC+GGG - chr7_4:56951404-56951423 None:intergenic 45.0%
! TTTAGCTTCTATTTGGGCGG+AGG + chr7_4:56952131-56952150 Msa1165090:three_prime_UTR 45.0%
!! GCATCTTACGTCGGTTTGGA+TGG + chr7_4:56943184-56943203 Msa1165090:CDS 50.0%
GCTATAGAGAAGAAGAGCGG+TGG - chr7_4:56943254-56943273 None:intergenic 50.0%
CCGAGTGATCATGTAGCCAA+TGG - chr7_4:56943691-56943710 None:intergenic 50.0%
!! CTGGGTTCTGGGATGTTACA+AGG - chr7_4:56944315-56944334 None:intergenic 50.0%
ACATCCCAGAACCCAGTTCA+TGG + chr7_4:56944319-56944338 Msa1165090:CDS 50.0%
TGATGCAGTTGGAACCAGCT+TGG + chr7_4:56944838-56944857 Msa1165090:intron 50.0%
GGACGTTGACCAGATATTGG+AGG - chr7_4:56945725-56945744 None:intergenic 50.0%
ACGTCCAAAAGCCCGATATG+AGG + chr7_4:56945739-56945758 Msa1165090:CDS 50.0%
TAAACGCACTTGGCTTAGGG+AGG - chr7_4:56945834-56945853 None:intergenic 50.0%
! CTGGACTTGGTCAAAGCTTG+AGG + chr7_4:56946175-56946194 Msa1165090:CDS 50.0%
CGACGAGTCCTCTACAACTT+TGG + chr7_4:56946208-56946227 Msa1165090:CDS 50.0%
! TCCATGTGCTGGCCATTCTT+TGG + chr7_4:56946232-56946251 Msa1165090:CDS 50.0%
ACCAAAGAATGGCCAGCACA+TGG - chr7_4:56946236-56946255 None:intergenic 50.0%
! GGAAGGATCTTTTGTGTGGC+CGG - chr7_4:56946396-56946415 None:intergenic 50.0%
GGAAACTCAAAGTGCAGAGG+CGG - chr7_4:56946591-56946610 None:intergenic 50.0%
ACATACCGGAGGTTTCCCAT+AGG - chr7_4:56946925-56946944 None:intergenic 50.0%
AAGGAGAAGAGAGAGGGAGT+GGG - chr7_4:56947310-56947329 None:intergenic 50.0%
AAAGGAGAAGAGAGAGGGAG+TGG - chr7_4:56947311-56947330 None:intergenic 50.0%
! TTGGTGGGCAAGATGCAAAG+AGG + chr7_4:56947589-56947608 Msa1165090:CDS 50.0%
GTATGATCAGACCTTGGGGA+AGG - chr7_4:56947957-56947976 None:intergenic 50.0%
AGCGGTATGATCAGACCTTG+GGG - chr7_4:56947961-56947980 None:intergenic 50.0%
CAGCGGTATGATCAGACCTT+GGG - chr7_4:56947962-56947981 None:intergenic 50.0%
TCATACCGCTGCTGTACATG+TGG + chr7_4:56947971-56947990 Msa1165090:CDS 50.0%
GACATGCTGGTGTGACAGTA+GGG + chr7_4:56948207-56948226 Msa1165090:CDS 50.0%
ACATGCTGGTGTGACAGTAG+GGG + chr7_4:56948208-56948227 Msa1165090:CDS 50.0%
! GGGGAGAACTGGTTCATTGT+TGG + chr7_4:56948227-56948246 Msa1165090:CDS 50.0%
GAAGCCCCTGCAGAATAACA+AGG - chr7_4:56949614-56949633 None:intergenic 50.0%
TGAATATGGCTACCCTGGCT+TGG + chr7_4:56949648-56949667 Msa1165090:CDS 50.0%
TGTTACCACTGACCAAGCCA+GGG - chr7_4:56949663-56949682 None:intergenic 50.0%
ATGTTACCACTGACCAAGCC+AGG - chr7_4:56949664-56949683 None:intergenic 50.0%
! GCGTGTTTCTGTTGCTAGTG+AGG + chr7_4:56949694-56949713 Msa1165090:CDS 50.0%
!! TGCAAGGTCGATTTGTGGCT+TGG - chr7_4:56950037-56950056 None:intergenic 50.0%
GGCAGAAACACTGTCTGGTA+TGG - chr7_4:56950080-56950099 None:intergenic 50.0%
ACAAATGCTACCCGCGATAC+AGG + chr7_4:56950112-56950131 Msa1165090:CDS 50.0%
GATCTACGCTTGTGAGCCAA+AGG - chr7_4:56950367-56950386 None:intergenic 50.0%
GGCAGAACATGCAGAGTTTG+AGG - chr7_4:56950669-56950688 None:intergenic 50.0%
GTTCTTCTCTCTCAGCCTTC+AGG - chr7_4:56950817-56950836 None:intergenic 50.0%
!!! CCTGGTCTTTTGGGGTAATC+GGG + chr7_4:56951157-56951176 Msa1165090:intron 50.0%
TAGGAGCTCCAATCAGTACG+TGG + chr7_4:56951311-56951330 Msa1165090:intron 50.0%
GTGGCATTTGCCTCCTTTCA+TGG + chr7_4:56951729-56951748 Msa1165090:intron 50.0%
TTGCCTCCTTTCATGGACGA+AGG + chr7_4:56951736-56951755 Msa1165090:intron 50.0%
CTTCCTTCGTCCATGAAAGG+AGG - chr7_4:56951742-56951761 None:intergenic 50.0%
CCACTTCCTTCGTCCATGAA+AGG - chr7_4:56951745-56951764 None:intergenic 50.0%
CCTTTCATGGACGAAGGAAG+TGG + chr7_4:56951742-56951761 Msa1165090:intron 50.0%
ATATTTGAGTGCGCAGGTGG+AGG + chr7_4:56951820-56951839 Msa1165090:intron 50.0%
CAGGTGGAGGTTGCTGAATT+AGG + chr7_4:56951833-56951852 Msa1165090:intron 50.0%
TCATCATCTGCATTCTGGCC+AGG - chr7_4:56951998-56952017 None:intergenic 50.0%
TCCAGAACGGTTCTACGCTG+CGG + chr7_4:56943162-56943181 Msa1165090:CDS 55.0%
TACGCTGCGGCATCTTACGT+CGG + chr7_4:56943175-56943194 Msa1165090:CDS 55.0%
! TGCGGCATCTTACGTCGGTT+TGG + chr7_4:56943180-56943199 Msa1165090:CDS 55.0%
TGGAGCATAGCAAATGGGCC+AGG + chr7_4:56944349-56944368 Msa1165090:CDS 55.0%
TTGTGTGGCCGGCAATTGAC+AGG - chr7_4:56946385-56946404 None:intergenic 55.0%
AGGAGAAGAGAGAGGGAGTG+GGG - chr7_4:56947309-56947328 None:intergenic 55.0%
GGCCAATCAGTGTCCCTTGT+CGG + chr7_4:56947549-56947568 Msa1165090:CDS 55.0%
GCCAATCAGTGTCCCTTGTC+GGG + chr7_4:56947550-56947569 Msa1165090:CDS 55.0%
TCCCGACAAGGGACACTGAT+TGG - chr7_4:56947554-56947573 None:intergenic 55.0%
TGATCAGACCTTGGGGAAGG+AGG - chr7_4:56947954-56947973 None:intergenic 55.0%
GCAGCGGTATGATCAGACCT+TGG - chr7_4:56947963-56947982 None:intergenic 55.0%
TCGGTCCACATGTACAGCAG+CGG - chr7_4:56947979-56947998 None:intergenic 55.0%
TGGTCTCGTCCCACACAACA+AGG + chr7_4:56948161-56948180 Msa1165090:CDS 55.0%
GGACATGCTGGTGTGACAGT+AGG + chr7_4:56948206-56948225 Msa1165090:CDS 55.0%
GTGTGACAGTAGGGGAGAAC+TGG + chr7_4:56948216-56948235 Msa1165090:CDS 55.0%
TTCTGCAGGGGCTTCAGAGA+CGG + chr7_4:56949619-56949638 Msa1165090:intron 55.0%
CCCGATTACCCCAAAAGACC+AGG - chr7_4:56951160-56951179 None:intergenic 55.0%
! CGAGCTGACCACGTACTGAT+TGG - chr7_4:56951322-56951341 None:intergenic 55.0%
AGGAGCTTGAACTCCTCCAG+CGG + chr7_4:56951888-56951907 Msa1165090:CDS 55.0%
TGAACTCCTCCAGCGGCAAA+AGG + chr7_4:56951895-56951914 Msa1165090:CDS 55.0%
! TGCATTCTGGCCAGGAGTAC+CGG - chr7_4:56951990-56952009 None:intergenic 55.0%
GCGATGGCGAGAGCAAGTTC+TGG + chr7_4:56943130-56943149 Msa1165090:CDS 60.0%
GAGTCAACAGCGGCCACCAT+TGG + chr7_4:56943672-56943691 Msa1165090:intron 60.0%
GGAGAAGAGAGAGGGAGTGG+GGG - chr7_4:56947308-56947327 None:intergenic 60.0%
GAGATTCCAACGCCACGTGC+AGG + chr7_4:56948185-56948204 Msa1165090:CDS 60.0%
ACACCAGCATGTCCTGCACG+TGG - chr7_4:56948200-56948219 None:intergenic 60.0%
! GGTGGCGGTGACAACAAGAG+CGG + chr7_4:56948248-56948267 Msa1165090:CDS 60.0%
CGCGCCGCGTGTACATCAAA+TGG - chr7_4:56948382-56948401 None:intergenic 60.0%
GGGACGGCAGAAACACTGTC+TGG - chr7_4:56950085-56950104 None:intergenic 60.0%
AGCTCGCTGCTGAGCAGTCA+AGG + chr7_4:56951336-56951355 Msa1165090:CDS 60.0%
! ATGCAGCCTTTTGCCGCTGG+AGG - chr7_4:56951904-56951923 None:intergenic 60.0%
! CTGATGCAGCCTTTTGCCGC+TGG - chr7_4:56951907-56951926 None:intergenic 60.0%
GCAAAACAGAGGCAGGGCTC+AGG + chr7_4:56951944-56951963 Msa1165090:CDS 60.0%
AAACAGAGGCAGGGCTCAGG+TGG + chr7_4:56951947-56951966 Msa1165090:CDS 60.0%
GCCGCAGCGTAGAACCGTTC+TGG - chr7_4:56943166-56943185 None:intergenic 65.0%
AGAGAGAGGGAGTGGGGGCA+TGG - chr7_4:56947303-56947322 None:intergenic 65.0%
GCATGTCCTGCACGTGGCGT+TGG - chr7_4:56948194-56948213 None:intergenic 65.0%
ACGCCACGTGCAGGACATGC+TGG + chr7_4:56948194-56948213 Msa1165090:CDS 65.0%
!! GGCTACCCTGGCTTGGTCAG+TGG + chr7_4:56949655-56949674 Msa1165090:CDS 65.0%
!! GGTTGGCTTGCCGGTACTCC+TGG + chr7_4:56951977-56951996 Msa1165090:CDS 65.0%
! GCGGAGTGCCTCCTTCCCCA+AGG + chr7_4:56947943-56947962 Msa1165090:intron 70.0%
ACGCGGCGCGCCTATGCTGT+GGG + chr7_4:56948392-56948411 Msa1165090:intron 70.0%
GCAGGGCTCAGGTGGCGTGT+GGG + chr7_4:56951955-56951974 Msa1165090:CDS 70.0%
CAGGGCTCAGGTGGCGTGTG+GGG + chr7_4:56951956-56951975 Msa1165090:CDS 70.0%
GCTCAGGTGGCGTGTGGGGT+TGG + chr7_4:56951960-56951979 Msa1165090:CDS 70.0%
!! GGCGTGTGGGGTTGGCTTGC+CGG + chr7_4:56951968-56951987 Msa1165090:CDS 70.0%
CACGCGGCGCGCCTATGCTG+TGG + chr7_4:56948391-56948410 Msa1165090:intron 75.0%
GGCAGGGCTCAGGTGGCGTG+TGG + chr7_4:56951954-56951973 Msa1165090:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 56942865 56952286 56942865 ID=Msa1165090;Name=Msa1165090
chr7_4 mRNA 56942865 56952286 56942865 ID=Msa1165090-mRNA-1;Parent=Msa1165090;Name=Msa1165090-mRNA-1;_AED=0.09;_eAED=0.09;_QI=256|0.88|0.94|0.94|0.88|0.94|18|265|650
chr7_4 exon 56942865 56943285 56942865 ID=Msa1165090-mRNA-1:exon:17058;Parent=Msa1165090-mRNA-1
chr7_4 exon 56944300 56944370 56944300 ID=Msa1165090-mRNA-1:exon:17059;Parent=Msa1165090-mRNA-1
chr7_4 exon 56944846 56944909 56944846 ID=Msa1165090-mRNA-1:exon:17060;Parent=Msa1165090-mRNA-1
chr7_4 exon 56945002 56945073 56945002 ID=Msa1165090-mRNA-1:exon:17061;Parent=Msa1165090-mRNA-1
chr7_4 exon 56945566 56945760 56945566 ID=Msa1165090-mRNA-1:exon:17062;Parent=Msa1165090-mRNA-1
chr7_4 exon 56945863 56945940 56945863 ID=Msa1165090-mRNA-1:exon:17063;Parent=Msa1165090-mRNA-1
chr7_4 exon 56946158 56946253 56946158 ID=Msa1165090-mRNA-1:exon:17064;Parent=Msa1165090-mRNA-1
chr7_4 exon 56946362 56946428 56946362 ID=Msa1165090-mRNA-1:exon:17065;Parent=Msa1165090-mRNA-1
chr7_4 exon 56947416 56947435 56947416 ID=Msa1165090-mRNA-1:exon:17066;Parent=Msa1165090-mRNA-1
chr7_4 exon 56947537 56947676 56947537 ID=Msa1165090-mRNA-1:exon:17067;Parent=Msa1165090-mRNA-1
chr7_4 exon 56947944 56948070 56947944 ID=Msa1165090-mRNA-1:exon:17068;Parent=Msa1165090-mRNA-1
chr7_4 exon 56948155 56948269 56948155 ID=Msa1165090-mRNA-1:exon:17069;Parent=Msa1165090-mRNA-1
chr7_4 exon 56949627 56949715 56949627 ID=Msa1165090-mRNA-1:exon:17070;Parent=Msa1165090-mRNA-1
chr7_4 exon 56949844 56949927 56949844 ID=Msa1165090-mRNA-1:exon:17071;Parent=Msa1165090-mRNA-1
chr7_4 exon 56950019 56950201 56950019 ID=Msa1165090-mRNA-1:exon:17072;Parent=Msa1165090-mRNA-1
chr7_4 exon 56950788 56950928 56950788 ID=Msa1165090-mRNA-1:exon:17073;Parent=Msa1165090-mRNA-1
chr7_4 exon 56951314 56951373 56951314 ID=Msa1165090-mRNA-1:exon:17074;Parent=Msa1165090-mRNA-1
chr7_4 exon 56951836 56952286 56951836 ID=Msa1165090-mRNA-1:exon:17075;Parent=Msa1165090-mRNA-1
chr7_4 five_prime_UTR 56942865 56943120 56942865 ID=Msa1165090-mRNA-1:five_prime_utr;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56943121 56943285 56943121 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56944300 56944370 56944300 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56944846 56944909 56944846 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56945002 56945073 56945002 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56945566 56945760 56945566 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56945863 56945940 56945863 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56946158 56946253 56946158 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56946362 56946428 56946362 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56947416 56947435 56947416 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56947537 56947676 56947537 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56947944 56948070 56947944 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56948155 56948269 56948155 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56949627 56949715 56949627 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56949844 56949927 56949844 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56950019 56950201 56950019 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56950788 56950928 56950788 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56951314 56951373 56951314 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 CDS 56951836 56952021 56951836 ID=Msa1165090-mRNA-1:cds;Parent=Msa1165090-mRNA-1
chr7_4 three_prime_UTR 56952022 56952286 56952022 ID=Msa1165090-mRNA-1:three_prime_utr;Parent=Msa1165090-mRNA-1
Gene Sequence

>Msa1165090

ATGTCGATGGCGATGGCGAGAGCAAGTTCTGGTTTGCAATATCCAGAACGGTTCTACGCTGCGGCATCTTACGTCGGTTTGGATGGATCCAATTCTCCAACTAAATCTCTTACATCTAAATTCCCTAAATCCACCGCTCTTCTTCTCTATAGCTTATATCAACAGGCTAGTGTAGGACCTTGTAACATCCCAGAACCCAGTTCATGGAAAATTGTGGAGCATAGCAAATGGGCCAGTTGGAACCAGCTTGGAAACATGTCTTCCACAGAAGCCATGCGTCTTTTTGTGAAAATATTGGAGGAAGAAGATCCTGGTTGGTATTCAAGAGCATCTAACTCTTTTGCAGAGCCTGTAATAGACGTTCAAATGAATCATAATTCCAAAGTTGAACCAGTAATTGAGAATGGGAACACTTATCCAGAGACAAAAACTATTTCCTCTGAAAATGGAAATCAAGTTGGAACACAGGATAAAGATGTTGTTATGGAAGGCTTTGGTTCAGTTGGAGTCTATGATCAATGGATTGCACCTCCAATATCTGGTCAACGTCCAAAAGCCCGATATGAGCATGGAGCTGCAGCTATGCAAGATAAATTGTACATATATGGTGGAAATCACAATGGCCGTTATCTTAGTGATCTTCATGTTTTGGATTTGAGAAGCTGGACTTGGTCAAAGCTTGAGGTTAAGGCTGGCGACGAGTCCTCTACAACTTTGGATCCATGTGCTGGCCATTCTTTGATTGCATGGGGAAATAAGCTCCTGTCAATTGCCGGCCACACAAAAGATCCTTCCGAAAGTATCCAAGGTATCACTTGGGGCCAATTTATATCACGTGGAGGCCAATCAGTGTCCCTTGTCGGGAATACCTTAGTAATTTTTGGTGGGCAAGATGCAAAGAGGACTCTCTTGAATGACCTGCATATTCTGGACTTGGAAACCATGACATGGGACGAAATTGATGCTGTCGGAGTGCCTCCTTCCCCAAGGTCTGATCATACCGCTGCTGTACATGTGGACCGATACTTACTTATCTTTGGAGGGGGTTCACATGCCACTTGCTACAATGATTTACATGTTCTCGATTTGCAAACTATGGAATGGTCTCGTCCCACACAACAAGGTGAGATTCCAACGCCACGTGCAGGACATGCTGGTGTGACAGTAGGGGAGAACTGGTTCATTGTTGGTGGCGGTGACAACAAGAGCGGGGCTTCAGAGACGGTTGTACTGAATATGGCTACCCTGGCTTGGTCAGTGGTAACATCTGTTCAAGGGCGTGTTTCTGTTGCTAGTGAGGGCTTGAGTTTGGTTGTAAGTTCATATAATGGCGAAGATGTACTTGTATCTTTTGGAGGATACAATGGACGTTACAACAGTGAAGTCTATGTTCTTAAACCAAGCCACAAATCGACCTTGCAATCCAAAATAATTGAAAATTCCATACCAGACAGTGTTTCTGCCGTCCCAAATGCTACAAATGCTACCCGCGATACAGGATCTGAATTTGGAGCAGGACATGAAGGGAAAATTTTGGAAATTGCCGTGGATAACTCTTATACAACAAAATCCAAAGGTGATCTCATATCAGTCCTGAAGGCTGAGAGAGAAGAACTAGAATCATCACTCAGTAAGGAGAAGCTGCATACTCTTCAACTAAAGCAAGAGCTGGCTGATGCCGAGTCTAATAACTCTGACCTTTACAAGGAGCTCCAATCAGTACGTGGTCAGCTCGCTGCTGAGCAGTCAAGGTGTTTCAAACTTGAGGTGGAGGTTGCTGAATTAGGTCAGAAGCTCCAAAATTTTGGAACATTACAAAAGGAGCTTGAACTCCTCCAGCGGCAAAAGGCTGCATCAGAGCAAGCTGCTTTAAGTGCAAAACAGAGGCAGGGCTCAGGTGGCGTGTGGGGTTGGCTTGCCGGTACTCCTGGCCAGAATGCAGATGATGAATGA
Protein sequence

>Msa1165090

MSMAMARASSGLQYPERFYAAASYVGLDGSNSPTKSLTSKFPKSTALLLYSLYQQASVGPCNIPEPSSWKIVEHSKWASWNQLGNMSSTEAMRLFVKILEEEDPGWYSRASNSFAEPVIDVQMNHNSKVEPVIENGNTYPETKTISSENGNQVGTQDKDVVMEGFGSVGVYDQWIAPPISGQRPKARYEHGAAAMQDKLYIYGGNHNGRYLSDLHVLDLRSWTWSKLEVKAGDESSTTLDPCAGHSLIAWGNKLLSIAGHTKDPSESIQGITWGQFISRGGQSVSLVGNTLVIFGGQDAKRTLLNDLHILDLETMTWDEIDAVGVPPSPRSDHTAAVHVDRYLLIFGGGSHATCYNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTVGENWFIVGGGDNKSGASETVVLNMATLAWSVVTSVQGRVSVASEGLSLVVSSYNGEDVLVSFGGYNGRYNSEVYVLKPSHKSTLQSKIIENSIPDSVSAVPNATNATRDTGSEFGAGHEGKILEIAVDNSYTTKSKGDLISVLKAEREELESSLSKEKLHTLQLKQELADAESNNSDLYKELQSVRGQLAAEQSRCFKLEVEVAELGQKLQNFGTLQKELELLQRQKAASEQAALSAKQRQGSGGVWGWLAGTPGQNADDE*