Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0040790 | XP_013469883.1 | 99.000 | 300 | 3 | 0 | 1 | 300 | 1 | 300 | 0.0 | 625 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0040790 | sp|Q8L9A9|XTH8_ARATH | 82.550 | 298 | 46 | 4 | 5 | 299 | 10 | 304 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002420 | Msa0040790 | 0.833217 | 6.054017e-56 | -8.615850e-47 |
| Msa0028440 | Msa0040790 | 0.836486 | 9.098667e-57 | -8.615850e-47 |
| Msa0029380 | Msa0040790 | 0.805376 | 1.375728e-49 | -8.615850e-47 |
| Msa0040790 | Msa0077340 | 0.842348 | 2.731791e-58 | -8.615850e-47 |
| Msa0040790 | Msa0077560 | 0.825543 | 4.425849e-54 | -8.615850e-47 |
| Msa0040790 | Msa0098070 | 0.802120 | 6.521404e-49 | -8.615850e-47 |
| Msa0040790 | Msa0124910 | 0.865782 | 4.598461e-65 | -8.615850e-47 |
| Msa0040790 | Msa0125360 | 0.824581 | 7.470973e-54 | -8.615850e-47 |
| Msa0040790 | Msa0168480 | 0.849533 | 3.043097e-60 | -8.615850e-47 |
| Msa0040790 | Msa0169410 | 0.838921 | 2.157313e-57 | -8.615850e-47 |
| Msa0040790 | Msa0184500 | 0.930043 | 2.907803e-93 | -8.615850e-47 |
| Msa0040790 | Msa0189270 | 0.801499 | 8.749917e-49 | -8.615850e-47 |
| Msa0040790 | Msa0203080 | 0.802187 | 6.320055e-49 | -8.615850e-47 |
| Msa0040790 | Msa0209140 | 0.817415 | 3.337532e-52 | -8.615850e-47 |
| Msa0040790 | Msa0231630 | 0.811832 | 5.747474e-51 | -8.615850e-47 |
| Msa0040790 | Msa0281470 | 0.802849 | 4.615517e-49 | -8.615850e-47 |
| Msa0040790 | Msa0288620 | 0.817256 | 3.623455e-52 | -8.615850e-47 |
| Msa0040790 | Msa0307270 | 0.853904 | 1.755090e-61 | -8.615850e-47 |
| Msa0040790 | Msa0309720 | 0.810053 | 1.395457e-50 | -8.615850e-47 |
| Msa0040790 | Msa0326710 | 0.808324 | 3.275996e-50 | -8.615850e-47 |
| Msa0040790 | Msa0330520 | 0.844791 | 6.074620e-59 | -8.615850e-47 |
| Msa0040790 | Msa0375640 | 0.827023 | 1.967172e-54 | -8.615850e-47 |
| Msa0040790 | Msa0385310 | 0.807054 | 6.094737e-50 | -8.615850e-47 |
| Msa0040790 | Msa0412790 | 0.807059 | 6.081927e-50 | -8.615850e-47 |
| Msa0040790 | Msa0417970 | 0.814526 | 1.473064e-51 | -8.615850e-47 |
| Msa0040790 | Msa0424160 | 0.834455 | 2.967419e-56 | -8.615850e-47 |
| Msa0040790 | Msa0430230 | 0.803566 | 3.278628e-49 | -8.615850e-47 |
| Msa0040790 | Msa0435570 | 0.804249 | 2.364672e-49 | -8.615850e-47 |
| Msa0040790 | Msa0479420 | 0.808476 | 3.040000e-50 | -8.615850e-47 |
| Msa0040790 | Msa0495300 | 0.836953 | 6.916911e-57 | -8.615850e-47 |
| Msa0040790 | Msa0515800 | 0.824069 | 9.852733e-54 | -8.615850e-47 |
| Msa0040790 | Msa0519760 | 0.854371 | 1.286815e-61 | -8.615850e-47 |
| Msa0040790 | Msa0519810 | 0.845125 | 4.935226e-59 | -8.615850e-47 |
| Msa0040790 | Msa0519840 | 0.854591 | 1.111814e-61 | -8.615850e-47 |
| Msa0040790 | Msa0523110 | 0.814819 | 1.268478e-51 | -8.615850e-47 |
| Msa0040790 | Msa0529030 | 0.814924 | 1.202409e-51 | -8.615850e-47 |
| Msa0040790 | Msa0574900 | 0.806425 | 8.277626e-50 | -8.615850e-47 |
| Msa0040790 | Msa0617940 | 0.852261 | 5.183737e-61 | -8.615850e-47 |
| Msa0040790 | Msa0626460 | 0.807263 | 5.506626e-50 | -8.615850e-47 |
| Msa0040790 | Msa0649200 | 0.811032 | 8.575134e-51 | -8.615850e-47 |
| Msa0040790 | Msa0652770 | 0.874288 | 7.595583e-68 | -8.615850e-47 |
| Msa0040790 | Msa0660370 | 0.812887 | 3.381190e-51 | -8.615850e-47 |
| Msa0040790 | Msa0692790 | 0.889046 | 3.438255e-73 | -8.615850e-47 |
| Msa0040790 | Msa0693330 | 0.802807 | 4.708498e-49 | -8.615850e-47 |
| Msa0040790 | Msa0700970 | 0.843539 | 1.316753e-58 | -8.615850e-47 |
| Msa0040790 | Msa0702720 | 0.802870 | 4.568689e-49 | -8.615850e-47 |
| Msa0040790 | Msa0703950 | 0.855748 | 5.123875e-62 | -8.615850e-47 |
| Msa0040790 | Msa0706760 | 0.828152 | 1.053708e-54 | -8.615850e-47 |
| Msa0040790 | Msa0716890 | 0.810900 | 9.158479e-51 | -8.615850e-47 |
| Msa0040790 | Msa0733080 | 0.811404 | 7.119666e-51 | -8.615850e-47 |
| Msa0040790 | Msa0758030 | 0.813739 | 2.197821e-51 | -8.615850e-47 |
| Msa0040790 | Msa0795750 | 0.816319 | 5.879971e-52 | -8.615850e-47 |
| Msa0040790 | Msa0810930 | 0.804357 | 2.246169e-49 | -8.615850e-47 |
| Msa0040790 | Msa0813160 | 0.807635 | 4.589556e-50 | -8.615850e-47 |
| Msa0040790 | Msa0851850 | 0.839155 | 1.876946e-57 | -8.615850e-47 |
| Msa0040790 | Msa0880270 | 0.813343 | 2.685622e-51 | -8.615850e-47 |
| Msa0040790 | Msa0894680 | 0.804849 | 1.772746e-49 | -8.615850e-47 |
| Msa0040790 | Msa0902360 | 0.814687 | 1.357139e-51 | -8.615850e-47 |
| Msa0040790 | Msa0945190 | 0.867224 | 1.602177e-65 | -8.615850e-47 |
| Msa0040790 | Msa0982650 | 0.809499 | 1.835646e-50 | -8.615850e-47 |
| Msa0040790 | Msa1002350 | 0.822790 | 1.962080e-53 | -8.615850e-47 |
| Msa0040790 | Msa1031010 | 0.821167 | 4.662384e-53 | -8.615850e-47 |
| Msa0040790 | Msa1031020 | 0.811995 | 5.295964e-51 | -8.615850e-47 |
| Msa0040790 | Msa1070150 | 0.816999 | 4.140201e-52 | -8.615850e-47 |
| Msa0040790 | Msa1072940 | 0.838475 | 2.813777e-57 | -8.615850e-47 |
| Msa0040790 | Msa1085330 | 0.821308 | 4.327421e-53 | -8.615850e-47 |
| Msa0040790 | Msa1106590 | 0.825076 | 5.709689e-54 | -8.615850e-47 |
| Msa0040790 | Msa1145300 | 0.912923 | 1.115494e-83 | -8.615850e-47 |
| Msa0040790 | Msa1157980 | 0.800522 | 1.385220e-48 | -8.615850e-47 |
| Msa0040790 | Msa1160920 | 0.835393 | 1.722820e-56 | -8.615850e-47 |
| Msa0040790 | Msa1165090 | 0.832236 | 1.060804e-55 | -8.615850e-47 |
| Msa0040790 | Msa1207190 | 0.822372 | 2.454431e-53 | -8.615850e-47 |
| Msa0040790 | Msa1257440 | 0.835591 | 1.534671e-56 | -8.615850e-47 |
| Msa0040790 | Msa1268240 | 0.800713 | 1.266738e-48 | -8.615850e-47 |
| Msa0040790 | Msa1305250 | 0.833160 | 6.254265e-56 | -8.615850e-47 |
| Msa0040790 | Msa1306640 | 0.802157 | 6.409420e-49 | -8.615850e-47 |
| Msa0040790 | Msa1341840 | 0.807823 | 4.188239e-50 | -8.615850e-47 |
| Msa0040790 | Msa1348090 | 0.802577 | 5.251862e-49 | -8.615850e-47 |
| Msa0040790 | Msa1371910 | 0.806292 | 8.830933e-50 | -8.615850e-47 |
| Msa0040790 | Msa1375280 | 0.811358 | 7.285068e-51 | -8.615850e-47 |
| Msa0040790 | Msa1382300 | 0.800970 | 1.122400e-48 | -8.615850e-47 |
| Msa0040790 | Msa1383820 | 0.823044 | 1.712037e-53 | -8.615850e-47 |
| Msa0040790 | Msa1391500 | 0.804037 | 2.618273e-49 | -8.615850e-47 |
| Msa0040790 | Msa1405460 | 0.822537 | 2.246415e-53 | -8.615850e-47 |
| Msa0040790 | Msa1407840 | 0.832178 | 1.096054e-55 | -8.615850e-47 |
| Msa0040790 | Msa1412000 | 0.868616 | 5.721108e-66 | -8.615850e-47 |
| Msa0040790 | Msa1414390 | 0.806069 | 9.839437e-50 | -8.615850e-47 |
| Msa0040790 | Msa1427110 | 0.854886 | 9.130442e-62 | -8.615850e-47 |
| Msa0040790 | Msa1437810 | 0.829308 | 5.536290e-55 | -8.615850e-47 |
| Msa0040790 | Msa1454500 | 0.833061 | 6.619780e-56 | -8.615850e-47 |
| Msa0040790 | Msa1457890 | 0.814385 | 1.582934e-51 | -8.615850e-47 |
| Msa0040790 | Msa1461370 | 0.811638 | 6.334856e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0040790 | MtrunA17_Chr1g0206081 | 99.000 | 300 | 3 | 0 | 1 | 300 | 1 | 300 | 0.0 | 625 |
| Msa0040790 | MtrunA17_Chr4g0054431 | 53.435 | 262 | 118 | 2 | 33 | 294 | 30 | 287 | 2.65e-99 | 293 |
| Msa0040790 | MtrunA17_Chr4g0054451 | 53.435 | 262 | 118 | 2 | 33 | 294 | 32 | 289 | 3.27e-99 | 293 |
| Msa0040790 | MtrunA17_Chr1g0206681 | 46.367 | 289 | 149 | 3 | 11 | 296 | 8 | 293 | 4.00e-97 | 288 |
| Msa0040790 | MtrunA17_Chr7g0252631 | 48.966 | 290 | 144 | 2 | 5 | 294 | 2 | 287 | 2.10e-94 | 281 |
| Msa0040790 | MtrunA17_Chr7g0252621 | 48.454 | 291 | 146 | 2 | 5 | 295 | 2 | 288 | 2.09e-93 | 278 |
| Msa0040790 | MtrunA17_Chr6g0461761 | 48.592 | 284 | 142 | 2 | 12 | 295 | 9 | 288 | 9.40e-93 | 276 |
| Msa0040790 | MtrunA17_Chr6g0461731 | 47.751 | 289 | 147 | 2 | 7 | 295 | 27 | 311 | 1.12e-92 | 277 |
| Msa0040790 | MtrunA17_Chr7g0252601 | 48.227 | 282 | 142 | 2 | 13 | 294 | 10 | 287 | 1.62e-92 | 276 |
| Msa0040790 | MtrunA17_Chr2g0323161 | 49.265 | 272 | 126 | 4 | 30 | 294 | 20 | 286 | 6.29e-91 | 272 |
| Msa0040790 | MtrunA17_Chr4g0023961 | 48.339 | 271 | 128 | 4 | 31 | 294 | 23 | 288 | 1.16e-87 | 264 |
| Msa0040790 | MtrunA17_Chr4g0072611 | 48.727 | 275 | 133 | 4 | 25 | 297 | 15 | 283 | 1.81e-86 | 260 |
| Msa0040790 | MtrunA17_Chr7g0258911 | 47.079 | 291 | 141 | 5 | 8 | 296 | 2 | 281 | 5.98e-86 | 259 |
| Msa0040790 | MtrunA17_Chr8g0377841 | 44.792 | 288 | 143 | 6 | 9 | 295 | 10 | 282 | 1.81e-83 | 253 |
| Msa0040790 | MtrunA17_Chr3g0122021 | 43.929 | 280 | 145 | 3 | 16 | 294 | 9 | 277 | 2.65e-82 | 249 |
| Msa0040790 | MtrunA17_Chr3g0122031 | 44.245 | 278 | 143 | 3 | 18 | 294 | 11 | 277 | 3.40e-82 | 249 |
| Msa0040790 | MtrunA17_Chr4g0072671 | 46.931 | 277 | 133 | 5 | 28 | 297 | 19 | 288 | 1.95e-80 | 245 |
| Msa0040790 | MtrunA17_Chr4g0071341 | 45.055 | 273 | 139 | 4 | 29 | 297 | 19 | 284 | 3.44e-80 | 244 |
| Msa0040790 | MtrunA17_Chr2g0299061 | 43.986 | 291 | 149 | 4 | 11 | 297 | 9 | 289 | 2.62e-79 | 242 |
| Msa0040790 | MtrunA17_Chr6g0486581 | 41.958 | 286 | 152 | 5 | 12 | 294 | 9 | 283 | 2.98e-78 | 239 |
| Msa0040790 | MtrunA17_Chr4g0072601 | 42.807 | 285 | 151 | 4 | 14 | 294 | 7 | 283 | 1.37e-76 | 235 |
| Msa0040790 | MtrunA17_Chr8g0340001 | 48.523 | 237 | 115 | 4 | 59 | 294 | 1 | 231 | 7.85e-74 | 226 |
| Msa0040790 | MtrunA17_Chr8g0374231 | 97.196 | 107 | 3 | 0 | 194 | 300 | 1 | 107 | 1.66e-73 | 221 |
| Msa0040790 | MtrunA17_Chr8g0389641 | 40.925 | 281 | 118 | 5 | 18 | 297 | 12 | 245 | 8.75e-72 | 221 |
| Msa0040790 | MtrunA17_Chr4g0072681 | 49.333 | 225 | 107 | 3 | 77 | 297 | 25 | 246 | 1.65e-70 | 218 |
| Msa0040790 | MtrunA17_Chr5g0443391 | 41.065 | 263 | 144 | 4 | 33 | 294 | 26 | 278 | 7.13e-68 | 213 |
| Msa0040790 | MtrunA17_Chr3g0096651 | 42.803 | 264 | 140 | 5 | 33 | 294 | 28 | 282 | 3.24e-65 | 206 |
| Msa0040790 | MtrunA17_Chr2g0303861 | 36.861 | 274 | 164 | 7 | 9 | 281 | 3 | 268 | 1.02e-60 | 194 |
| Msa0040790 | MtrunA17_Chr8g0390201 | 46.354 | 192 | 100 | 2 | 106 | 294 | 18 | 209 | 2.58e-60 | 191 |
| Msa0040790 | MtrunA17_Chr8g0375981 | 36.271 | 295 | 176 | 6 | 9 | 300 | 11 | 296 | 1.00e-58 | 191 |
| Msa0040790 | MtrunA17_Chr5g0410621 | 38.686 | 274 | 156 | 6 | 35 | 300 | 42 | 311 | 4.34e-58 | 190 |
| Msa0040790 | MtrunA17_Chr8g0365231 | 36.940 | 268 | 160 | 5 | 34 | 294 | 45 | 310 | 7.53e-58 | 188 |
| Msa0040790 | MtrunA17_Chr7g0235541 | 44.240 | 217 | 111 | 6 | 82 | 296 | 1 | 209 | 7.89e-58 | 184 |
| Msa0040790 | MtrunA17_Chr4g0028221 | 37.729 | 273 | 155 | 7 | 27 | 294 | 42 | 304 | 1.33e-57 | 187 |
| Msa0040790 | MtrunA17_Chr2g0327411 | 37.818 | 275 | 153 | 7 | 27 | 294 | 46 | 309 | 8.78e-56 | 182 |
| Msa0040790 | MtrunA17_Chr1g0180451 | 34.768 | 302 | 165 | 9 | 9 | 294 | 9 | 294 | 2.75e-54 | 178 |
| Msa0040790 | MtrunA17_Chr8g0382041 | 35.316 | 269 | 169 | 4 | 35 | 300 | 34 | 300 | 1.08e-53 | 178 |
| Msa0040790 | MtrunA17_Chr2g0303721 | 34.708 | 291 | 167 | 9 | 10 | 298 | 5 | 274 | 1.64e-53 | 176 |
| Msa0040790 | MtrunA17_Chr1g0161951 | 36.704 | 267 | 158 | 6 | 35 | 296 | 33 | 293 | 3.77e-53 | 176 |
| Msa0040790 | MtrunA17_Chr7g0264731 | 37.037 | 270 | 147 | 7 | 35 | 295 | 37 | 292 | 4.17e-53 | 175 |
| Msa0040790 | MtrunA17_Chr4g0072641 | 42.748 | 131 | 58 | 3 | 168 | 297 | 37 | 151 | 4.86e-28 | 105 |
| Msa0040790 | MtrunA17_Chr8g0374241 | 97.222 | 36 | 1 | 0 | 100 | 135 | 1 | 36 | 1.97e-19 | 79.7 |
| Msa0040790 | MtrunA17_Chr8g0350711 | 34.682 | 173 | 106 | 4 | 59 | 231 | 56 | 221 | 3.13e-17 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0040790 | AT1G11545.1 | 82.550 | 298 | 46 | 4 | 5 | 299 | 10 | 304 | 0.0 | 516 |
| Msa0040790 | AT5G13870.2 | 50.859 | 291 | 138 | 3 | 4 | 294 | 2 | 287 | 8.28e-98 | 290 |
| Msa0040790 | AT5G13870.1 | 50.859 | 291 | 138 | 3 | 4 | 294 | 2 | 287 | 8.28e-98 | 290 |
| Msa0040790 | AT5G13870.3 | 50.859 | 291 | 138 | 3 | 4 | 294 | 2 | 287 | 8.28e-98 | 290 |
| Msa0040790 | AT4G37800.1 | 50.741 | 270 | 128 | 3 | 27 | 295 | 25 | 290 | 7.06e-96 | 285 |
| Msa0040790 | AT5G65730.1 | 47.603 | 292 | 141 | 3 | 3 | 294 | 11 | 290 | 9.68e-96 | 285 |
| Msa0040790 | AT2G06850.1 | 53.846 | 260 | 116 | 2 | 35 | 294 | 35 | 290 | 5.92e-93 | 278 |
| Msa0040790 | AT2G06850.2 | 57.143 | 231 | 95 | 2 | 65 | 295 | 5 | 231 | 8.24e-90 | 267 |
| Msa0040790 | AT2G14620.1 | 45.675 | 289 | 151 | 3 | 11 | 296 | 11 | 296 | 2.19e-89 | 268 |
| Msa0040790 | AT4G03210.1 | 46.528 | 288 | 142 | 5 | 9 | 294 | 7 | 284 | 1.23e-88 | 266 |
| Msa0040790 | AT5G57560.1 | 44.369 | 293 | 142 | 5 | 8 | 294 | 4 | 281 | 1.67e-85 | 258 |
| Msa0040790 | AT3G23730.1 | 43.813 | 299 | 152 | 5 | 4 | 297 | 2 | 289 | 5.84e-84 | 254 |
| Msa0040790 | AT5G57540.1 | 48.881 | 268 | 127 | 5 | 33 | 297 | 24 | 284 | 2.90e-83 | 253 |
| Msa0040790 | AT5G57550.1 | 46.021 | 289 | 145 | 6 | 7 | 294 | 4 | 282 | 5.11e-83 | 252 |
| Msa0040790 | AT5G57530.1 | 47.794 | 272 | 132 | 5 | 29 | 297 | 21 | 285 | 6.99e-83 | 251 |
| Msa0040790 | AT4G25810.1 | 43.310 | 284 | 157 | 2 | 12 | 294 | 3 | 283 | 2.87e-82 | 250 |
| Msa0040790 | AT4G03210.2 | 52.174 | 230 | 104 | 3 | 67 | 294 | 31 | 256 | 6.58e-82 | 248 |
| Msa0040790 | AT4G30270.1 | 43.151 | 292 | 140 | 5 | 7 | 297 | 2 | 268 | 7.91e-81 | 246 |
| Msa0040790 | AT4G25820.1 | 46.520 | 273 | 134 | 4 | 28 | 296 | 23 | 287 | 1.57e-79 | 243 |
| Msa0040790 | AT4G14130.1 | 43.243 | 296 | 156 | 6 | 4 | 297 | 2 | 287 | 2.63e-79 | 243 |
| Msa0040790 | AT2G14620.2 | 49.138 | 232 | 114 | 2 | 66 | 296 | 18 | 246 | 1.10e-78 | 239 |
| Msa0040790 | AT4G13090.1 | 42.759 | 290 | 157 | 4 | 6 | 294 | 7 | 288 | 8.45e-77 | 236 |
| Msa0040790 | AT2G14620.3 | 49.776 | 223 | 108 | 2 | 75 | 296 | 16 | 235 | 4.56e-76 | 233 |
| Msa0040790 | AT5G48070.1 | 43.396 | 265 | 139 | 5 | 33 | 295 | 27 | 282 | 2.58e-74 | 229 |
| Msa0040790 | AT3G25050.1 | 41.221 | 262 | 147 | 4 | 34 | 294 | 34 | 289 | 6.48e-74 | 229 |
| Msa0040790 | AT4G28850.1 | 40.690 | 290 | 159 | 6 | 10 | 295 | 8 | 288 | 2.17e-73 | 228 |
| Msa0040790 | AT4G13080.1 | 40.000 | 285 | 164 | 4 | 10 | 294 | 14 | 291 | 1.97e-72 | 225 |
| Msa0040790 | AT2G18800.1 | 40.132 | 304 | 150 | 7 | 9 | 295 | 9 | 297 | 2.07e-71 | 223 |
| Msa0040790 | AT4G30280.1 | 40.816 | 294 | 156 | 7 | 5 | 295 | 4 | 282 | 1.18e-69 | 218 |
| Msa0040790 | AT1G65310.1 | 43.019 | 265 | 140 | 5 | 33 | 295 | 27 | 282 | 1.09e-67 | 213 |
| Msa0040790 | AT1G65310.2 | 43.019 | 265 | 140 | 5 | 33 | 295 | 49 | 304 | 1.13e-67 | 213 |
| Msa0040790 | AT4G30290.1 | 40.070 | 287 | 152 | 6 | 11 | 295 | 9 | 277 | 6.88e-67 | 210 |
| Msa0040790 | AT2G01850.1 | 35.714 | 294 | 181 | 4 | 11 | 300 | 7 | 296 | 5.21e-61 | 197 |
| Msa0040790 | AT1G32170.1 | 38.079 | 302 | 177 | 6 | 5 | 300 | 2 | 299 | 6.78e-61 | 197 |
| Msa0040790 | AT3G44990.1 | 37.542 | 301 | 158 | 7 | 12 | 294 | 5 | 293 | 3.35e-59 | 191 |
| Msa0040790 | AT1G14720.1 | 35.836 | 293 | 180 | 4 | 12 | 300 | 8 | 296 | 1.39e-58 | 191 |
| Msa0040790 | AT1G10550.1 | 35.379 | 277 | 161 | 4 | 35 | 294 | 34 | 309 | 3.25e-56 | 184 |
| Msa0040790 | AT4G18990.1 | 35.714 | 280 | 165 | 3 | 35 | 300 | 40 | 318 | 1.50e-54 | 181 |
| Msa0040790 | AT2G36870.1 | 34.000 | 300 | 176 | 8 | 6 | 294 | 9 | 297 | 1.92e-51 | 171 |
| Msa0040790 | AT3G48580.1 | 33.591 | 259 | 150 | 8 | 37 | 294 | 36 | 273 | 1.72e-47 | 160 |
| Msa0040790 | AT3G48580.3 | 35.931 | 231 | 127 | 7 | 65 | 294 | 4 | 214 | 6.26e-46 | 154 |
| Msa0040790 | AT4G18990.2 | 35.021 | 237 | 133 | 5 | 84 | 300 | 9 | 244 | 1.96e-40 | 142 |
| Msa0040790 | AT3G48580.2 | 28.185 | 259 | 144 | 9 | 37 | 294 | 36 | 253 | 6.68e-31 | 117 |
| Msa0040790 | AT2G36870.2 | 35.260 | 173 | 98 | 4 | 6 | 167 | 9 | 178 | 1.48e-27 | 105 |
Find 80 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCAAGTTCATCTCTTTC+TGG | 0.152227 | 1_1:-71066614 | None:intergenic |
| TATGATGCTTGGCATCTTTC+AGG | 0.170390 | 1_1:+71067514 | Msa0040790:CDS |
| TTGTTCTTGAACACCCTTAT+TGG | 0.227899 | 1_1:-71067271 | None:intergenic |
| ACAGGACCCTCCATCCATTT+TGG | 0.234790 | 1_1:-71065708 | None:intergenic |
| ATGGAGGGATTCTCTGCTTT+TGG | 0.252398 | 1_1:-71065658 | None:intergenic |
| TTTGGTTAGGAGGAGAATTT+TGG | 0.254879 | 1_1:-71065690 | None:intergenic |
| AAGTACATTGGTTTCTCATT+TGG | 0.290156 | 1_1:-71067316 | None:intergenic |
| ACATTTGTTTGAATCAAATA+TGG | 0.300118 | 1_1:-71066665 | None:intergenic |
| GATACCTGTGTCATTGTCTA+AGG | 0.305085 | 1_1:-71065891 | None:intergenic |
| AATTCTCCTCCTAACCAAAA+TGG | 0.310789 | 1_1:+71065694 | Msa0040790:exon |
| TTGTGGATAGAGTTCCAATA+AGG | 0.315911 | 1_1:+71067257 | Msa0040790:CDS |
| TCTTTCAGGTGATCAGAAAA+TGG | 0.325557 | 1_1:+71067528 | Msa0040790:CDS |
| AAGAATGAACTTACACTATC+TGG | 0.346292 | 1_1:-71066784 | None:intergenic |
| CATCTGTAGAAGTAGTAAAA+TGG | 0.347942 | 1_1:-71065850 | None:intergenic |
| GTTCAGTATGAAGCTGAAAT+TGG | 0.347997 | 1_1:+71066396 | Msa0040790:CDS |
| AGTACATTGGTTTCTCATTT+GGG | 0.354048 | 1_1:-71067315 | None:intergenic |
| AGCAGAAGCAGCTATGTCTA+AGG | 0.356338 | 1_1:+71065787 | Msa0040790:CDS |
| GTTGAAACACATTTAGGAAA+TGG | 0.376286 | 1_1:-71067466 | None:intergenic |
| ATGTCTCATCTCACGATTAC+CGG | 0.385651 | 1_1:-71066702 | None:intergenic |
| TCATTTGGGAAGAAATTGTT+TGG | 0.386974 | 1_1:-71067301 | None:intergenic |
| GTTGTGGTTGAAACACATTT+AGG | 0.398748 | 1_1:-71067472 | None:intergenic |
| ACAAAACAAAGATACAGATT+TGG | 0.405420 | 1_1:+71066370 | Msa0040790:CDS |
| ATCACACCTATTCTATTCTC+TGG | 0.408329 | 1_1:+71066753 | Msa0040790:CDS |
| ATCAGAAAATGGATTATGCT+TGG | 0.410696 | 1_1:+71067539 | Msa0040790:CDS |
| CAAACAAATGTGTACAAGAA+TGG | 0.414124 | 1_1:+71066677 | Msa0040790:CDS |
| AAGAATGGAAAATGAAGAAC+AGG | 0.416645 | 1_1:-71065726 | None:intergenic |
| TTGCAGATGTGTACAGAAAA+TGG | 0.418568 | 1_1:+71066584 | Msa0040790:intron |
| TTTAATTATGTAAAAGCATA+GGG | 0.426049 | 1_1:+71067761 | Msa0040790:three_prime_UTR |
| ATCAACACTAAAGTCTTTGT+AGG | 0.426921 | 1_1:-71067425 | None:intergenic |
| GTGAGATGAGACATATGCTT+TGG | 0.427321 | 1_1:+71066711 | Msa0040790:CDS |
| AAACAAATGTGTACAAGAAT+GGG | 0.444792 | 1_1:+71066678 | Msa0040790:CDS |
| GGATCTCTGAACCCGAGGTT+TGG | 0.447831 | 1_1:-71065637 | None:intergenic |
| TGTGGATAGAGTTCCAATAA+GGG | 0.449235 | 1_1:+71067258 | Msa0040790:CDS |
| GAGCACTCCTCAGGCAAAGT+TGG | 0.451574 | 1_1:-71067613 | None:intergenic |
| ATGATGATAAGCAGCTACTA+TGG | 0.459398 | 1_1:-71065762 | None:intergenic |
| GTGCATGGAATGCAGATGAT+TGG | 0.464474 | 1_1:+71067347 | Msa0040790:CDS |
| TCAGAAAATGGATTATGCTT+GGG | 0.479320 | 1_1:+71067540 | Msa0040790:CDS |
| TCCATGGGAGTAATGTATCA+TGG | 0.480160 | 1_1:+71067642 | Msa0040790:exon |
| AGGAGTGCTCATTGAGTCCA+TGG | 0.481061 | 1_1:+71067626 | Msa0040790:CDS |
| GTTATTCCAGAGAATAGAAT+AGG | 0.498751 | 1_1:-71066759 | None:intergenic |
| TTATTGAACTTCCAAACCTC+GGG | 0.499927 | 1_1:+71065626 | Msa0040790:five_prime_UTR |
| GGCTGCAAGGAAAAGAAGAA+TGG | 0.506963 | 1_1:-71065741 | None:intergenic |
| TGCATGGAATGCAGATGATT+GGG | 0.510463 | 1_1:+71067348 | Msa0040790:CDS |
| CCATGGGAGTAATGTATCAT+GGG | 0.513209 | 1_1:+71067643 | Msa0040790:exon |
| ATGTGTACAGAAAATGGTGC+AGG | 0.516508 | 1_1:+71066590 | Msa0040790:CDS |
| GGACTCAATGAGCACTCCTC+AGG | 0.517455 | 1_1:-71067622 | None:intergenic |
| TTAGTGTTGATGCTTGTCAA+TGG | 0.533968 | 1_1:+71067437 | Msa0040790:CDS |
| CTTCTACAGATGGACAGATC+TGG | 0.534707 | 1_1:+71065861 | Msa0040790:CDS |
| GCACTTGAAAACAAGTACAT+TGG | 0.538869 | 1_1:-71067328 | None:intergenic |
| GTCATGATGTTATAAGTGAA+TGG | 0.541403 | 1_1:+71065490 | None:intergenic |
| TAGTGTTGATGCTTGTCAAT+GGG | 0.548485 | 1_1:+71067438 | Msa0040790:CDS |
| TTTATTGAACTTCCAAACCT+CGG | 0.551560 | 1_1:+71065625 | Msa0040790:five_prime_UTR |
| CCCATGATACATTACTCCCA+TGG | 0.558590 | 1_1:-71067643 | None:intergenic |
| GATGATTGGGCCACAAGAGG+TGG | 0.559220 | 1_1:+71067361 | Msa0040790:CDS |
| TCCTAACCAAAATGGATGGA+GGG | 0.570885 | 1_1:+71065702 | Msa0040790:exon |
| GCAGAAGCAGCTATGTCTAA+GGG | 0.571565 | 1_1:+71065788 | Msa0040790:CDS |
| CTCCTCCTAACCAAAATGGA+TGG | 0.573738 | 1_1:+71065698 | Msa0040790:exon |
| CTCCTAACCAAAATGGATGG+AGG | 0.578804 | 1_1:+71065701 | Msa0040790:exon |
| TGCAATAGTCATAGATGACA+AGG | 0.582934 | 1_1:-71067573 | None:intergenic |
| TTGGTAGGAGGTGATTCTGC+TGG | 0.585894 | 1_1:+71066415 | Msa0040790:CDS |
| AACAAAGATACAGATTTGGA+TGG | 0.590115 | 1_1:+71066374 | Msa0040790:CDS |
| GGTGGGATCAATATGATGCT+TGG | 0.593619 | 1_1:+71067503 | Msa0040790:CDS |
| TTGTTTAATAAATTTGCATG+TGG | 0.595209 | 1_1:-71065530 | None:intergenic |
| AGTATGAAGCTGAAATTGGT+AGG | 0.601753 | 1_1:+71066400 | Msa0040790:CDS |
| GCAGATGATTGGGCCACAAG+AGG | 0.605501 | 1_1:+71067358 | Msa0040790:CDS |
| AATGTGTACAAGAATGGGAC+CGG | 0.607915 | 1_1:+71066683 | Msa0040790:CDS |
| TAGGTGTGATAGTCCTCAGT+GGG | 0.619254 | 1_1:-71066740 | None:intergenic |
| AAGACAACTTCAGCATAATG+TGG | 0.628622 | 1_1:+71065819 | Msa0040790:CDS |
| TCTTTGTAGGATGACACAAA+TGG | 0.631516 | 1_1:-71067412 | None:intergenic |
| AAGCAGCTACTATGGCTGCA+AGG | 0.637837 | 1_1:-71065754 | None:intergenic |
| TTGAATGTTTGACAGGATGT+GGG | 0.642879 | 1_1:+71066341 | Msa0040790:intron |
| GGAGTGCTCATTGAGTCCAT+GGG | 0.646187 | 1_1:+71067627 | Msa0040790:CDS |
| ATGAAGCTGAAATTGGTAGG+AGG | 0.646766 | 1_1:+71066403 | Msa0040790:CDS |
| TGTGTACAGAAAATGGTGCA+GGG | 0.655933 | 1_1:+71066591 | Msa0040790:CDS |
| AATGAACTTACACTATCTGG+TGG | 0.659740 | 1_1:-71066781 | None:intergenic |
| TATTAAACAACTAAACAGAG+TGG | 0.664714 | 1_1:+71065543 | Msa0040790:five_prime_UTR |
| CTCTCCTTAGACAATGACAC+AGG | 0.665868 | 1_1:+71065887 | Msa0040790:CDS |
| CATGGGAGTAATGTATCATG+GGG | 0.672948 | 1_1:+71067644 | Msa0040790:exon |
| GCTTTGGTTTGATCCCACTG+AGG | 0.724888 | 1_1:+71066727 | Msa0040790:CDS |
| ATAGGTGTGATAGTCCTCAG+TGG | 0.744401 | 1_1:-71066741 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCGATAGAATTAATTTT+GGG | + | chr1_1:71066193-71066212 | Msa0040790:intron | 15.0% |
| !!! | TTTTCGATAGAATTAATTTT+GGG | + | chr1_1:71066193-71066212 | Msa0040790:intron | 15.0% |
| !! | TTGTTTAATAAATTTGCATG+TGG | - | chr1_1:71065533-71065552 | None:intergenic | 20.0% |
| !!! | GATTTACATAAACTTACTTT+TGG | + | chr1_1:71066126-71066145 | Msa0040790:intron | 20.0% |
| !!! | CTTTTCGATAGAATTAATTT+TGG | + | chr1_1:71066192-71066211 | Msa0040790:intron | 20.0% |
| !!! | AAAGTTGAGAGTATAATTTA+TGG | + | chr1_1:71066231-71066250 | Msa0040790:intron | 20.0% |
| !!! | AACATTCAATGCTTTAAAAA+TGG | - | chr1_1:71066330-71066349 | None:intergenic | 20.0% |
| !! | ACATTTGTTTGAATCAAATA+TGG | - | chr1_1:71066668-71066687 | None:intergenic | 20.0% |
| !!! | TTGATGTCATTTTTTTACTT+GGG | - | chr1_1:71066843-71066862 | None:intergenic | 20.0% |
| !!! | TTTGATGTCATTTTTTTACT+TGG | - | chr1_1:71066844-71066863 | None:intergenic | 20.0% |
| !!! | AGTTTAAGACTTTTTGTTTT+TGG | + | chr1_1:71066959-71066978 | Msa0040790:intron | 20.0% |
| !! | AGTAAAATGTATGTACAATA+TGG | + | chr1_1:71067035-71067054 | Msa0040790:intron | 20.0% |
| !! | ATGAATATGATTATGTCATA+TGG | + | chr1_1:71067093-71067112 | Msa0040790:intron | 20.0% |
| !! | TAAAAAGACCTTATATTTCA+AGG | + | chr1_1:71067143-71067162 | Msa0040790:intron | 20.0% |
| !! | AAAAAGACCTTATATTTCAA+GGG | + | chr1_1:71067144-71067163 | Msa0040790:intron | 20.0% |
| !! | ACCTTAATTCAAGATATTTA+TGG | + | chr1_1:71067184-71067203 | Msa0040790:intron | 20.0% |
| !! | TCCATAAATATCTTGAATTA+AGG | - | chr1_1:71067188-71067207 | None:intergenic | 20.0% |
| !! | TTGTTTAATAAATTTGCATG+TGG | - | chr1_1:71065533-71065552 | None:intergenic | 20.0% |
| !!! | GATTTACATAAACTTACTTT+TGG | + | chr1_1:71066126-71066145 | Msa0040790:intron | 20.0% |
| !!! | CTTTTCGATAGAATTAATTT+TGG | + | chr1_1:71066192-71066211 | Msa0040790:intron | 20.0% |
| !!! | AAAGTTGAGAGTATAATTTA+TGG | + | chr1_1:71066231-71066250 | Msa0040790:intron | 20.0% |
| !!! | AACATTCAATGCTTTAAAAA+TGG | - | chr1_1:71066330-71066349 | None:intergenic | 20.0% |
| !! | ACATTTGTTTGAATCAAATA+TGG | - | chr1_1:71066668-71066687 | None:intergenic | 20.0% |
| !!! | TTGATGTCATTTTTTTACTT+GGG | - | chr1_1:71066843-71066862 | None:intergenic | 20.0% |
| !!! | TTTGATGTCATTTTTTTACT+TGG | - | chr1_1:71066844-71066863 | None:intergenic | 20.0% |
| !!! | AGTTTAAGACTTTTTGTTTT+TGG | + | chr1_1:71066959-71066978 | Msa0040790:intron | 20.0% |
| !! | AGTAAAATGTATGTACAATA+TGG | + | chr1_1:71067035-71067054 | Msa0040790:intron | 20.0% |
| !! | ATGAATATGATTATGTCATA+TGG | + | chr1_1:71067093-71067112 | Msa0040790:intron | 20.0% |
| !! | TAAAAAGACCTTATATTTCA+AGG | + | chr1_1:71067143-71067162 | Msa0040790:intron | 20.0% |
| !! | AAAAAGACCTTATATTTCAA+GGG | + | chr1_1:71067144-71067163 | Msa0040790:intron | 20.0% |
| !! | ACCTTAATTCAAGATATTTA+TGG | + | chr1_1:71067184-71067203 | Msa0040790:intron | 20.0% |
| !! | TCCATAAATATCTTGAATTA+AGG | - | chr1_1:71067188-71067207 | None:intergenic | 20.0% |
| ! | TATTAAACAACTAAACAGAG+TGG | + | chr1_1:71065543-71065562 | Msa0040790:five_prime_UTR | 25.0% |
| !! | AAATACTCTAAGAGTTTGTT+CGG | + | chr1_1:71066033-71066052 | Msa0040790:intron | 25.0% |
| !!! | AAACTTACTTTTGGATAGTT+TGG | + | chr1_1:71066135-71066154 | Msa0040790:intron | 25.0% |
| !!! | ATAGAATTAATTTTGGGACT+AGG | + | chr1_1:71066199-71066218 | Msa0040790:intron | 25.0% |
| ! | ACAAAACAAAGATACAGATT+TGG | + | chr1_1:71066370-71066389 | Msa0040790:CDS | 25.0% |
| ! | GGATTCATAAAAACACAAAA+AGG | - | chr1_1:71066528-71066547 | None:intergenic | 25.0% |
| !!! | TGTGTTTTTATGAATCCAAT+TGG | + | chr1_1:71066531-71066550 | Msa0040790:intron | 25.0% |
| !!! | TGAACTTGATTTTGAGTTTT+TGG | + | chr1_1:71066625-71066644 | Msa0040790:CDS | 25.0% |
| !!! | GAACTTGATTTTGAGTTTTT+GGG | + | chr1_1:71066626-71066645 | Msa0040790:CDS | 25.0% |
| ! | AAACAAATGTGTACAAGAAT+GGG | + | chr1_1:71066678-71066697 | Msa0040790:CDS | 25.0% |
| ! | CATTCTTATATTGCTCTTAT+TGG | + | chr1_1:71066800-71066819 | Msa0040790:intron | 25.0% |
| ! | TGTTTGCAAATATGGTAATA+GGG | + | chr1_1:71066865-71066884 | Msa0040790:intron | 25.0% |
| !!! | TTAAGACTTTTTGTTTTTGG+TGG | + | chr1_1:71066962-71066981 | Msa0040790:intron | 25.0% |
| ! | AAAATGTATGTACAATATGG+TGG | + | chr1_1:71067038-71067057 | Msa0040790:intron | 25.0% |
| ! | CTAGCAATGATAATTAAACT+AGG | - | chr1_1:71067065-71067084 | None:intergenic | 25.0% |
| ! | TTTCAACCACAACAAAAAAT+TGG | + | chr1_1:71067482-71067501 | Msa0040790:CDS | 25.0% |
| ! | TATTAAACAACTAAACAGAG+TGG | + | chr1_1:71065543-71065562 | Msa0040790:five_prime_UTR | 25.0% |
| !! | AAATACTCTAAGAGTTTGTT+CGG | + | chr1_1:71066033-71066052 | Msa0040790:intron | 25.0% |
| !!! | AAACTTACTTTTGGATAGTT+TGG | + | chr1_1:71066135-71066154 | Msa0040790:intron | 25.0% |
| !!! | ATAGAATTAATTTTGGGACT+AGG | + | chr1_1:71066199-71066218 | Msa0040790:intron | 25.0% |
| ! | ACAAAACAAAGATACAGATT+TGG | + | chr1_1:71066370-71066389 | Msa0040790:CDS | 25.0% |
| ! | GGATTCATAAAAACACAAAA+AGG | - | chr1_1:71066528-71066547 | None:intergenic | 25.0% |
| !!! | TGTGTTTTTATGAATCCAAT+TGG | + | chr1_1:71066531-71066550 | Msa0040790:intron | 25.0% |
| !!! | TGAACTTGATTTTGAGTTTT+TGG | + | chr1_1:71066625-71066644 | Msa0040790:CDS | 25.0% |
| !!! | GAACTTGATTTTGAGTTTTT+GGG | + | chr1_1:71066626-71066645 | Msa0040790:CDS | 25.0% |
| ! | AAACAAATGTGTACAAGAAT+GGG | + | chr1_1:71066678-71066697 | Msa0040790:CDS | 25.0% |
| ! | CATTCTTATATTGCTCTTAT+TGG | + | chr1_1:71066800-71066819 | Msa0040790:intron | 25.0% |
| ! | TGTTTGCAAATATGGTAATA+GGG | + | chr1_1:71066865-71066884 | Msa0040790:intron | 25.0% |
| !!! | TTAAGACTTTTTGTTTTTGG+TGG | + | chr1_1:71066962-71066981 | Msa0040790:intron | 25.0% |
| ! | AAAATGTATGTACAATATGG+TGG | + | chr1_1:71067038-71067057 | Msa0040790:intron | 25.0% |
| ! | CTAGCAATGATAATTAAACT+AGG | - | chr1_1:71067065-71067084 | None:intergenic | 25.0% |
| ! | TTTCAACCACAACAAAAAAT+TGG | + | chr1_1:71067482-71067501 | Msa0040790:CDS | 25.0% |
| TTTATTGAACTTCCAAACCT+CGG | + | chr1_1:71065625-71065644 | Msa0040790:five_prime_UTR | 30.0% | |
| !!! | AGAATTTTGGTTCAAGAGAA+TGG | - | chr1_1:71065680-71065699 | None:intergenic | 30.0% |
| AAGAATGGAAAATGAAGAAC+AGG | - | chr1_1:71065729-71065748 | None:intergenic | 30.0% | |
| CATCTGTAGAAGTAGTAAAA+TGG | - | chr1_1:71065853-71065872 | None:intergenic | 30.0% | |
| ! | CATTTTACTACTTCTACAGA+TGG | + | chr1_1:71065851-71065870 | Msa0040790:CDS | 30.0% |
| GAGTAAGTCAAACATTATTC+TGG | + | chr1_1:71066267-71066286 | Msa0040790:intron | 30.0% | |
| AAGTCAAACATTATTCTGGA+AGG | + | chr1_1:71066271-71066290 | Msa0040790:intron | 30.0% | |
| !! | TAAAGCATTGAATGTTTGAC+AGG | + | chr1_1:71066334-71066353 | Msa0040790:intron | 30.0% |
| AACAAAGATACAGATTTGGA+TGG | + | chr1_1:71066374-71066393 | Msa0040790:CDS | 30.0% | |
| ! | GTTTTTATGAATCCAATTGG+TGG | + | chr1_1:71066534-71066553 | Msa0040790:intron | 30.0% |
| ! | GAGTGTTGTTAACAAGAATA+GGG | + | chr1_1:71066556-71066575 | Msa0040790:intron | 30.0% |
| ! | AGTGTTGTTAACAAGAATAG+GGG | + | chr1_1:71066557-71066576 | Msa0040790:intron | 30.0% |
| AAATCAAGTTCATCTCTTTC+TGG | - | chr1_1:71066617-71066636 | None:intergenic | 30.0% | |
| CAAACAAATGTGTACAAGAA+TGG | + | chr1_1:71066677-71066696 | Msa0040790:CDS | 30.0% | |
| GTTATTCCAGAGAATAGAAT+AGG | - | chr1_1:71066762-71066781 | None:intergenic | 30.0% | |
| AAGAATGAACTTACACTATC+TGG | - | chr1_1:71066787-71066806 | None:intergenic | 30.0% | |
| ! | CATCAAAGTGTTTGCAAATA+TGG | + | chr1_1:71066857-71066876 | Msa0040790:intron | 30.0% |
| GTGTTTGCAAATATGGTAAT+AGG | + | chr1_1:71066864-71066883 | Msa0040790:intron | 30.0% | |
| !!! | TTTATGCTTTTGTCGGTTTA+AGG | + | chr1_1:71066905-71066924 | Msa0040790:intron | 30.0% |
| !!! | TTATGCTTTTGTCGGTTTAA+GGG | + | chr1_1:71066906-71066925 | Msa0040790:intron | 30.0% |
| TTGACAATTGAGAAAAGAGA+AGG | - | chr1_1:71066933-71066952 | None:intergenic | 30.0% | |
| TTTGGTGGAAATAATAGTGT+AGG | + | chr1_1:71066977-71066996 | Msa0040790:intron | 30.0% | |
| ATCTGTACCCTTGAAATATA+AGG | - | chr1_1:71067154-71067173 | None:intergenic | 30.0% | |
| ACTGAATGTTGCAAATGAAT+TGG | + | chr1_1:71067223-71067242 | Msa0040790:intron | 30.0% | |
| !!! | AATTGGAAACAGGTTTTTTG+TGG | + | chr1_1:71067240-71067259 | Msa0040790:intron | 30.0% |
| TCATTTGGGAAGAAATTGTT+TGG | - | chr1_1:71067304-71067323 | None:intergenic | 30.0% | |
| !! | AGTACATTGGTTTCTCATTT+GGG | - | chr1_1:71067318-71067337 | None:intergenic | 30.0% |
| !! | AAGTACATTGGTTTCTCATT+TGG | - | chr1_1:71067319-71067338 | None:intergenic | 30.0% |
| ATCAACACTAAAGTCTTTGT+AGG | - | chr1_1:71067428-71067447 | None:intergenic | 30.0% | |
| GTTGAAACACATTTAGGAAA+TGG | - | chr1_1:71067469-71067488 | None:intergenic | 30.0% | |
| AACCACAACAAAAAATTGGT+GGG | + | chr1_1:71067486-71067505 | Msa0040790:CDS | 30.0% | |
| !! | ATCAGAAAATGGATTATGCT+TGG | + | chr1_1:71067539-71067558 | Msa0040790:CDS | 30.0% |
| !! | TCAGAAAATGGATTATGCTT+GGG | + | chr1_1:71067540-71067559 | Msa0040790:CDS | 30.0% |
| TTTATTGAACTTCCAAACCT+CGG | + | chr1_1:71065625-71065644 | Msa0040790:five_prime_UTR | 30.0% | |
| !!! | AGAATTTTGGTTCAAGAGAA+TGG | - | chr1_1:71065680-71065699 | None:intergenic | 30.0% |
| AAGAATGGAAAATGAAGAAC+AGG | - | chr1_1:71065729-71065748 | None:intergenic | 30.0% | |
| CATCTGTAGAAGTAGTAAAA+TGG | - | chr1_1:71065853-71065872 | None:intergenic | 30.0% | |
| ! | CATTTTACTACTTCTACAGA+TGG | + | chr1_1:71065851-71065870 | Msa0040790:CDS | 30.0% |
| GAGTAAGTCAAACATTATTC+TGG | + | chr1_1:71066267-71066286 | Msa0040790:intron | 30.0% | |
| AAGTCAAACATTATTCTGGA+AGG | + | chr1_1:71066271-71066290 | Msa0040790:intron | 30.0% | |
| !! | TAAAGCATTGAATGTTTGAC+AGG | + | chr1_1:71066334-71066353 | Msa0040790:intron | 30.0% |
| AACAAAGATACAGATTTGGA+TGG | + | chr1_1:71066374-71066393 | Msa0040790:CDS | 30.0% | |
| ! | GTTTTTATGAATCCAATTGG+TGG | + | chr1_1:71066534-71066553 | Msa0040790:intron | 30.0% |
| ! | GAGTGTTGTTAACAAGAATA+GGG | + | chr1_1:71066556-71066575 | Msa0040790:intron | 30.0% |
| ! | AGTGTTGTTAACAAGAATAG+GGG | + | chr1_1:71066557-71066576 | Msa0040790:intron | 30.0% |
| AAATCAAGTTCATCTCTTTC+TGG | - | chr1_1:71066617-71066636 | None:intergenic | 30.0% | |
| CAAACAAATGTGTACAAGAA+TGG | + | chr1_1:71066677-71066696 | Msa0040790:CDS | 30.0% | |
| GTTATTCCAGAGAATAGAAT+AGG | - | chr1_1:71066762-71066781 | None:intergenic | 30.0% | |
| AAGAATGAACTTACACTATC+TGG | - | chr1_1:71066787-71066806 | None:intergenic | 30.0% | |
| ! | CATCAAAGTGTTTGCAAATA+TGG | + | chr1_1:71066857-71066876 | Msa0040790:intron | 30.0% |
| GTGTTTGCAAATATGGTAAT+AGG | + | chr1_1:71066864-71066883 | Msa0040790:intron | 30.0% | |
| !!! | TTTATGCTTTTGTCGGTTTA+AGG | + | chr1_1:71066905-71066924 | Msa0040790:intron | 30.0% |
| !!! | TTATGCTTTTGTCGGTTTAA+GGG | + | chr1_1:71066906-71066925 | Msa0040790:intron | 30.0% |
| TTGACAATTGAGAAAAGAGA+AGG | - | chr1_1:71066933-71066952 | None:intergenic | 30.0% | |
| TTTGGTGGAAATAATAGTGT+AGG | + | chr1_1:71066977-71066996 | Msa0040790:intron | 30.0% | |
| ATCTGTACCCTTGAAATATA+AGG | - | chr1_1:71067154-71067173 | None:intergenic | 30.0% | |
| ACTGAATGTTGCAAATGAAT+TGG | + | chr1_1:71067223-71067242 | Msa0040790:intron | 30.0% | |
| !!! | AATTGGAAACAGGTTTTTTG+TGG | + | chr1_1:71067240-71067259 | Msa0040790:intron | 30.0% |
| TCATTTGGGAAGAAATTGTT+TGG | - | chr1_1:71067304-71067323 | None:intergenic | 30.0% | |
| !! | AGTACATTGGTTTCTCATTT+GGG | - | chr1_1:71067318-71067337 | None:intergenic | 30.0% |
| !! | AAGTACATTGGTTTCTCATT+TGG | - | chr1_1:71067319-71067338 | None:intergenic | 30.0% |
| ATCAACACTAAAGTCTTTGT+AGG | - | chr1_1:71067428-71067447 | None:intergenic | 30.0% | |
| GTTGAAACACATTTAGGAAA+TGG | - | chr1_1:71067469-71067488 | None:intergenic | 30.0% | |
| AACCACAACAAAAAATTGGT+GGG | + | chr1_1:71067486-71067505 | Msa0040790:CDS | 30.0% | |
| !! | ATCAGAAAATGGATTATGCT+TGG | + | chr1_1:71067539-71067558 | Msa0040790:CDS | 30.0% |
| !! | TCAGAAAATGGATTATGCTT+GGG | + | chr1_1:71067540-71067559 | Msa0040790:CDS | 30.0% |
| TTATTGAACTTCCAAACCTC+GGG | + | chr1_1:71065626-71065645 | Msa0040790:five_prime_UTR | 35.0% | |
| !!! | TTTTGGTTCAAGAGAATGGA+GGG | - | chr1_1:71065676-71065695 | None:intergenic | 35.0% |
| !!! | ATTTTGGTTCAAGAGAATGG+AGG | - | chr1_1:71065677-71065696 | None:intergenic | 35.0% |
| ! | TTTGGTTAGGAGGAGAATTT+TGG | - | chr1_1:71065693-71065712 | None:intergenic | 35.0% |
| AATTCTCCTCCTAACCAAAA+TGG | + | chr1_1:71065694-71065713 | Msa0040790:exon | 35.0% | |
| ATGATGATAAGCAGCTACTA+TGG | - | chr1_1:71065765-71065784 | None:intergenic | 35.0% | |
| AAGACAACTTCAGCATAATG+TGG | + | chr1_1:71065819-71065838 | Msa0040790:CDS | 35.0% | |
| GCATTAAAGTTGAGATTCTG+AGG | + | chr1_1:71066304-71066323 | Msa0040790:intron | 35.0% | |
| ATTGAATGTTTGACAGGATG+TGG | + | chr1_1:71066340-71066359 | Msa0040790:intron | 35.0% | |
| TTGAATGTTTGACAGGATGT+GGG | + | chr1_1:71066341-71066360 | Msa0040790:intron | 35.0% | |
| GTTCAGTATGAAGCTGAAAT+TGG | + | chr1_1:71066396-71066415 | Msa0040790:CDS | 35.0% | |
| AGTATGAAGCTGAAATTGGT+AGG | + | chr1_1:71066400-71066419 | Msa0040790:CDS | 35.0% | |
| !! | GGAGTGTTGTTAACAAGAAT+AGG | + | chr1_1:71066555-71066574 | Msa0040790:intron | 35.0% |
| TTGCAGATGTGTACAGAAAA+TGG | + | chr1_1:71066584-71066603 | Msa0040790:intron | 35.0% | |
| ATCACACCTATTCTATTCTC+TGG | + | chr1_1:71066753-71066772 | Msa0040790:CDS | 35.0% | |
| AATGAACTTACACTATCTGG+TGG | - | chr1_1:71066784-71066803 | None:intergenic | 35.0% | |
| ATATGGTAATAGGGCTAAGT+TGG | + | chr1_1:71066874-71066893 | Msa0040790:intron | 35.0% | |
| ! | GCACATCTTTATGCTTTTGT+CGG | + | chr1_1:71066898-71066917 | Msa0040790:intron | 35.0% |
| ATGTCATATGGACAGTAACA+AGG | + | chr1_1:71067105-71067124 | Msa0040790:intron | 35.0% | |
| GTTGCAAATGAATTGGAAAC+AGG | + | chr1_1:71067230-71067249 | Msa0040790:intron | 35.0% | |
| TTGTGGATAGAGTTCCAATA+AGG | + | chr1_1:71067257-71067276 | Msa0040790:CDS | 35.0% | |
| TGTGGATAGAGTTCCAATAA+GGG | + | chr1_1:71067258-71067277 | Msa0040790:CDS | 35.0% | |
| TTGTTCTTGAACACCCTTAT+TGG | - | chr1_1:71067274-71067293 | None:intergenic | 35.0% | |
| GCACTTGAAAACAAGTACAT+TGG | - | chr1_1:71067331-71067350 | None:intergenic | 35.0% | |
| !!! | TGTACTTGTTTTCAAGTGCA+TGG | + | chr1_1:71067332-71067351 | Msa0040790:CDS | 35.0% |
| GTGGACTTGAAAAAACAAAC+TGG | + | chr1_1:71067380-71067399 | Msa0040790:CDS | 35.0% | |
| TCTTTGTAGGATGACACAAA+TGG | - | chr1_1:71067415-71067434 | None:intergenic | 35.0% | |
| !! | TTAGTGTTGATGCTTGTCAA+TGG | + | chr1_1:71067437-71067456 | Msa0040790:CDS | 35.0% |
| !! | TAGTGTTGATGCTTGTCAAT+GGG | + | chr1_1:71067438-71067457 | Msa0040790:CDS | 35.0% |
| GTTGTGGTTGAAACACATTT+AGG | - | chr1_1:71067475-71067494 | None:intergenic | 35.0% | |
| CAACCACAACAAAAAATTGG+TGG | + | chr1_1:71067485-71067504 | Msa0040790:CDS | 35.0% | |
| !!! | ATCCCACCAATTTTTTGTTG+TGG | - | chr1_1:71067491-71067510 | None:intergenic | 35.0% |
| ! | TCTTTCAGGTGATCAGAAAA+TGG | + | chr1_1:71067528-71067547 | Msa0040790:CDS | 35.0% |
| TGCAATAGTCATAGATGACA+AGG | - | chr1_1:71067576-71067595 | None:intergenic | 35.0% | |
| TTATTGAACTTCCAAACCTC+GGG | + | chr1_1:71065626-71065645 | Msa0040790:five_prime_UTR | 35.0% | |
| !!! | TTTTGGTTCAAGAGAATGGA+GGG | - | chr1_1:71065676-71065695 | None:intergenic | 35.0% |
| !!! | ATTTTGGTTCAAGAGAATGG+AGG | - | chr1_1:71065677-71065696 | None:intergenic | 35.0% |
| ! | TTTGGTTAGGAGGAGAATTT+TGG | - | chr1_1:71065693-71065712 | None:intergenic | 35.0% |
| AATTCTCCTCCTAACCAAAA+TGG | + | chr1_1:71065694-71065713 | Msa0040790:exon | 35.0% | |
| ATGATGATAAGCAGCTACTA+TGG | - | chr1_1:71065765-71065784 | None:intergenic | 35.0% | |
| AAGACAACTTCAGCATAATG+TGG | + | chr1_1:71065819-71065838 | Msa0040790:CDS | 35.0% | |
| GCATTAAAGTTGAGATTCTG+AGG | + | chr1_1:71066304-71066323 | Msa0040790:intron | 35.0% | |
| ATTGAATGTTTGACAGGATG+TGG | + | chr1_1:71066340-71066359 | Msa0040790:intron | 35.0% | |
| TTGAATGTTTGACAGGATGT+GGG | + | chr1_1:71066341-71066360 | Msa0040790:intron | 35.0% | |
| GTTCAGTATGAAGCTGAAAT+TGG | + | chr1_1:71066396-71066415 | Msa0040790:CDS | 35.0% | |
| AGTATGAAGCTGAAATTGGT+AGG | + | chr1_1:71066400-71066419 | Msa0040790:CDS | 35.0% | |
| !! | GGAGTGTTGTTAACAAGAAT+AGG | + | chr1_1:71066555-71066574 | Msa0040790:intron | 35.0% |
| TTGCAGATGTGTACAGAAAA+TGG | + | chr1_1:71066584-71066603 | Msa0040790:intron | 35.0% | |
| ATCACACCTATTCTATTCTC+TGG | + | chr1_1:71066753-71066772 | Msa0040790:CDS | 35.0% | |
| AATGAACTTACACTATCTGG+TGG | - | chr1_1:71066784-71066803 | None:intergenic | 35.0% | |
| ATATGGTAATAGGGCTAAGT+TGG | + | chr1_1:71066874-71066893 | Msa0040790:intron | 35.0% | |
| ! | GCACATCTTTATGCTTTTGT+CGG | + | chr1_1:71066898-71066917 | Msa0040790:intron | 35.0% |
| ATGTCATATGGACAGTAACA+AGG | + | chr1_1:71067105-71067124 | Msa0040790:intron | 35.0% | |
| GTTGCAAATGAATTGGAAAC+AGG | + | chr1_1:71067230-71067249 | Msa0040790:intron | 35.0% | |
| TTGTGGATAGAGTTCCAATA+AGG | + | chr1_1:71067257-71067276 | Msa0040790:CDS | 35.0% | |
| TGTGGATAGAGTTCCAATAA+GGG | + | chr1_1:71067258-71067277 | Msa0040790:CDS | 35.0% | |
| TTGTTCTTGAACACCCTTAT+TGG | - | chr1_1:71067274-71067293 | None:intergenic | 35.0% | |
| GCACTTGAAAACAAGTACAT+TGG | - | chr1_1:71067331-71067350 | None:intergenic | 35.0% | |
| !!! | TGTACTTGTTTTCAAGTGCA+TGG | + | chr1_1:71067332-71067351 | Msa0040790:CDS | 35.0% |
| GTGGACTTGAAAAAACAAAC+TGG | + | chr1_1:71067380-71067399 | Msa0040790:CDS | 35.0% | |
| TCTTTGTAGGATGACACAAA+TGG | - | chr1_1:71067415-71067434 | None:intergenic | 35.0% | |
| !! | TTAGTGTTGATGCTTGTCAA+TGG | + | chr1_1:71067437-71067456 | Msa0040790:CDS | 35.0% |
| !! | TAGTGTTGATGCTTGTCAAT+GGG | + | chr1_1:71067438-71067457 | Msa0040790:CDS | 35.0% |
| GTTGTGGTTGAAACACATTT+AGG | - | chr1_1:71067475-71067494 | None:intergenic | 35.0% | |
| CAACCACAACAAAAAATTGG+TGG | + | chr1_1:71067485-71067504 | Msa0040790:CDS | 35.0% | |
| !!! | ATCCCACCAATTTTTTGTTG+TGG | - | chr1_1:71067491-71067510 | None:intergenic | 35.0% |
| ! | TCTTTCAGGTGATCAGAAAA+TGG | + | chr1_1:71067528-71067547 | Msa0040790:CDS | 35.0% |
| TGCAATAGTCATAGATGACA+AGG | - | chr1_1:71067576-71067595 | None:intergenic | 35.0% | |
| TCCTAACCAAAATGGATGGA+GGG | + | chr1_1:71065702-71065721 | Msa0040790:exon | 40.0% | |
| ! | GATACCTGTGTCATTGTCTA+AGG | - | chr1_1:71065894-71065913 | None:intergenic | 40.0% |
| ATGAAGCTGAAATTGGTAGG+AGG | + | chr1_1:71066403-71066422 | Msa0040790:CDS | 40.0% | |
| GTTAACAACACTCCACCAAT+TGG | - | chr1_1:71066549-71066568 | None:intergenic | 40.0% | |
| ATGTGTACAGAAAATGGTGC+AGG | + | chr1_1:71066590-71066609 | Msa0040790:CDS | 40.0% | |
| TGTGTACAGAAAATGGTGCA+GGG | + | chr1_1:71066591-71066610 | Msa0040790:CDS | 40.0% | |
| !! | GAGTTTTTGGGAAACAGAAC+AGG | + | chr1_1:71066638-71066657 | Msa0040790:CDS | 40.0% |
| AATGTGTACAAGAATGGGAC+CGG | + | chr1_1:71066683-71066702 | Msa0040790:CDS | 40.0% | |
| ATGTCTCATCTCACGATTAC+CGG | - | chr1_1:71066705-71066724 | None:intergenic | 40.0% | |
| GTGAGATGAGACATATGCTT+TGG | + | chr1_1:71066711-71066730 | Msa0040790:CDS | 40.0% | |
| TAGTGTAGGACAAGATTGTG+AGG | + | chr1_1:71066991-71067010 | Msa0040790:intron | 40.0% | |
| TGCATGGAATGCAGATGATT+GGG | + | chr1_1:71067348-71067367 | Msa0040790:CDS | 40.0% | |
| !!! | TTTTTCAAGTCCACCTCTTG+TGG | - | chr1_1:71067374-71067393 | None:intergenic | 40.0% |
| TATGATGCTTGGCATCTTTC+AGG | + | chr1_1:71067514-71067533 | Msa0040790:CDS | 40.0% | |
| TCCATGGGAGTAATGTATCA+TGG | + | chr1_1:71067642-71067661 | Msa0040790:exon | 40.0% | |
| CCATGGGAGTAATGTATCAT+GGG | + | chr1_1:71067643-71067662 | Msa0040790:exon | 40.0% | |
| CATGGGAGTAATGTATCATG+GGG | + | chr1_1:71067644-71067663 | Msa0040790:exon | 40.0% | |
| TCCTAACCAAAATGGATGGA+GGG | + | chr1_1:71065702-71065721 | Msa0040790:exon | 40.0% | |
| ! | GATACCTGTGTCATTGTCTA+AGG | - | chr1_1:71065894-71065913 | None:intergenic | 40.0% |
| ATGAAGCTGAAATTGGTAGG+AGG | + | chr1_1:71066403-71066422 | Msa0040790:CDS | 40.0% | |
| GTTAACAACACTCCACCAAT+TGG | - | chr1_1:71066549-71066568 | None:intergenic | 40.0% | |
| ATGTGTACAGAAAATGGTGC+AGG | + | chr1_1:71066590-71066609 | Msa0040790:CDS | 40.0% | |
| TGTGTACAGAAAATGGTGCA+GGG | + | chr1_1:71066591-71066610 | Msa0040790:CDS | 40.0% | |
| !! | GAGTTTTTGGGAAACAGAAC+AGG | + | chr1_1:71066638-71066657 | Msa0040790:CDS | 40.0% |
| AATGTGTACAAGAATGGGAC+CGG | + | chr1_1:71066683-71066702 | Msa0040790:CDS | 40.0% | |
| ATGTCTCATCTCACGATTAC+CGG | - | chr1_1:71066705-71066724 | None:intergenic | 40.0% | |
| GTGAGATGAGACATATGCTT+TGG | + | chr1_1:71066711-71066730 | Msa0040790:CDS | 40.0% | |
| TAGTGTAGGACAAGATTGTG+AGG | + | chr1_1:71066991-71067010 | Msa0040790:intron | 40.0% | |
| TGCATGGAATGCAGATGATT+GGG | + | chr1_1:71067348-71067367 | Msa0040790:CDS | 40.0% | |
| !!! | TTTTTCAAGTCCACCTCTTG+TGG | - | chr1_1:71067374-71067393 | None:intergenic | 40.0% |
| TATGATGCTTGGCATCTTTC+AGG | + | chr1_1:71067514-71067533 | Msa0040790:CDS | 40.0% | |
| TCCATGGGAGTAATGTATCA+TGG | + | chr1_1:71067642-71067661 | Msa0040790:exon | 40.0% | |
| CCATGGGAGTAATGTATCAT+GGG | + | chr1_1:71067643-71067662 | Msa0040790:exon | 40.0% | |
| CATGGGAGTAATGTATCATG+GGG | + | chr1_1:71067644-71067663 | Msa0040790:exon | 40.0% | |
| ! | ATGGAGGGATTCTCTGCTTT+TGG | - | chr1_1:71065661-71065680 | None:intergenic | 45.0% |
| CTCCTCCTAACCAAAATGGA+TGG | + | chr1_1:71065698-71065717 | Msa0040790:exon | 45.0% | |
| !!! | CTCCATCCATTTTGGTTAGG+AGG | - | chr1_1:71065703-71065722 | None:intergenic | 45.0% |
| CTCCTAACCAAAATGGATGG+AGG | + | chr1_1:71065701-71065720 | Msa0040790:exon | 45.0% | |
| !!! | ACCCTCCATCCATTTTGGTT+AGG | - | chr1_1:71065706-71065725 | None:intergenic | 45.0% |
| GGCTGCAAGGAAAAGAAGAA+TGG | - | chr1_1:71065744-71065763 | None:intergenic | 45.0% | |
| AGCAGAAGCAGCTATGTCTA+AGG | + | chr1_1:71065787-71065806 | Msa0040790:CDS | 45.0% | |
| GCAGAAGCAGCTATGTCTAA+GGG | + | chr1_1:71065788-71065807 | Msa0040790:CDS | 45.0% | |
| CTTCTACAGATGGACAGATC+TGG | + | chr1_1:71065861-71065880 | Msa0040790:CDS | 45.0% | |
| CTCTCCTTAGACAATGACAC+AGG | + | chr1_1:71065887-71065906 | Msa0040790:CDS | 45.0% | |
| TAGGTGTGATAGTCCTCAGT+GGG | - | chr1_1:71066743-71066762 | None:intergenic | 45.0% | |
| ATAGGTGTGATAGTCCTCAG+TGG | - | chr1_1:71066744-71066763 | None:intergenic | 45.0% | |
| GTGCATGGAATGCAGATGAT+TGG | + | chr1_1:71067347-71067366 | Msa0040790:CDS | 45.0% | |
| GGTGGGATCAATATGATGCT+TGG | + | chr1_1:71067503-71067522 | Msa0040790:CDS | 45.0% | |
| ! | ACGTTTTCCAACTTTGCCTG+AGG | + | chr1_1:71067606-71067625 | Msa0040790:CDS | 45.0% |
| CCCATGATACATTACTCCCA+TGG | - | chr1_1:71067646-71067665 | None:intergenic | 45.0% | |
| ! | ATGGAGGGATTCTCTGCTTT+TGG | - | chr1_1:71065661-71065680 | None:intergenic | 45.0% |
| CTCCTCCTAACCAAAATGGA+TGG | + | chr1_1:71065698-71065717 | Msa0040790:exon | 45.0% | |
| !!! | CTCCATCCATTTTGGTTAGG+AGG | - | chr1_1:71065703-71065722 | None:intergenic | 45.0% |
| CTCCTAACCAAAATGGATGG+AGG | + | chr1_1:71065701-71065720 | Msa0040790:exon | 45.0% | |
| !!! | ACCCTCCATCCATTTTGGTT+AGG | - | chr1_1:71065706-71065725 | None:intergenic | 45.0% |
| GGCTGCAAGGAAAAGAAGAA+TGG | - | chr1_1:71065744-71065763 | None:intergenic | 45.0% | |
| AGCAGAAGCAGCTATGTCTA+AGG | + | chr1_1:71065787-71065806 | Msa0040790:CDS | 45.0% | |
| GCAGAAGCAGCTATGTCTAA+GGG | + | chr1_1:71065788-71065807 | Msa0040790:CDS | 45.0% | |
| CTTCTACAGATGGACAGATC+TGG | + | chr1_1:71065861-71065880 | Msa0040790:CDS | 45.0% | |
| CTCTCCTTAGACAATGACAC+AGG | + | chr1_1:71065887-71065906 | Msa0040790:CDS | 45.0% | |
| TAGGTGTGATAGTCCTCAGT+GGG | - | chr1_1:71066743-71066762 | None:intergenic | 45.0% | |
| ATAGGTGTGATAGTCCTCAG+TGG | - | chr1_1:71066744-71066763 | None:intergenic | 45.0% | |
| GTGCATGGAATGCAGATGAT+TGG | + | chr1_1:71067347-71067366 | Msa0040790:CDS | 45.0% | |
| GGTGGGATCAATATGATGCT+TGG | + | chr1_1:71067503-71067522 | Msa0040790:CDS | 45.0% | |
| ! | ACGTTTTCCAACTTTGCCTG+AGG | + | chr1_1:71067606-71067625 | Msa0040790:CDS | 45.0% |
| CCCATGATACATTACTCCCA+TGG | - | chr1_1:71067646-71067665 | None:intergenic | 45.0% | |
| ! | CTTTTGGATCTCTGAACCCG+AGG | - | chr1_1:71065645-71065664 | None:intergenic | 50.0% |
| ! | ACAGGACCCTCCATCCATTT+TGG | - | chr1_1:71065711-71065730 | None:intergenic | 50.0% |
| AAGCAGCTACTATGGCTGCA+AGG | - | chr1_1:71065757-71065776 | None:intergenic | 50.0% | |
| TTGGTAGGAGGTGATTCTGC+TGG | + | chr1_1:71066415-71066434 | Msa0040790:CDS | 50.0% | |
| !! | GCTTTGGTTTGATCCCACTG+AGG | + | chr1_1:71066727-71066746 | Msa0040790:CDS | 50.0% |
| !! | AGGAGTGCTCATTGAGTCCA+TGG | + | chr1_1:71067626-71067645 | Msa0040790:CDS | 50.0% |
| ! | GGAGTGCTCATTGAGTCCAT+GGG | + | chr1_1:71067627-71067646 | Msa0040790:CDS | 50.0% |
| ! | CTTTTGGATCTCTGAACCCG+AGG | - | chr1_1:71065645-71065664 | None:intergenic | 50.0% |
| ! | ACAGGACCCTCCATCCATTT+TGG | - | chr1_1:71065711-71065730 | None:intergenic | 50.0% |
| AAGCAGCTACTATGGCTGCA+AGG | - | chr1_1:71065757-71065776 | None:intergenic | 50.0% | |
| TTGGTAGGAGGTGATTCTGC+TGG | + | chr1_1:71066415-71066434 | Msa0040790:CDS | 50.0% | |
| !! | GCTTTGGTTTGATCCCACTG+AGG | + | chr1_1:71066727-71066746 | Msa0040790:CDS | 50.0% |
| !! | AGGAGTGCTCATTGAGTCCA+TGG | + | chr1_1:71067626-71067645 | Msa0040790:CDS | 50.0% |
| ! | GGAGTGCTCATTGAGTCCAT+GGG | + | chr1_1:71067627-71067646 | Msa0040790:CDS | 50.0% |
| GGATCTCTGAACCCGAGGTT+TGG | - | chr1_1:71065640-71065659 | None:intergenic | 55.0% | |
| GCAGATGATTGGGCCACAAG+AGG | + | chr1_1:71067358-71067377 | Msa0040790:CDS | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | + | chr1_1:71067361-71067380 | Msa0040790:CDS | 55.0% | |
| GAGCACTCCTCAGGCAAAGT+TGG | - | chr1_1:71067616-71067635 | None:intergenic | 55.0% | |
| GGACTCAATGAGCACTCCTC+AGG | - | chr1_1:71067625-71067644 | None:intergenic | 55.0% | |
| GGATCTCTGAACCCGAGGTT+TGG | - | chr1_1:71065640-71065659 | None:intergenic | 55.0% | |
| GCAGATGATTGGGCCACAAG+AGG | + | chr1_1:71067358-71067377 | Msa0040790:CDS | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | + | chr1_1:71067361-71067380 | Msa0040790:CDS | 55.0% | |
| GAGCACTCCTCAGGCAAAGT+TGG | - | chr1_1:71067616-71067635 | None:intergenic | 55.0% | |
| GGACTCAATGAGCACTCCTC+AGG | - | chr1_1:71067625-71067644 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 71065492 | 71067780 | 71065492 | ID=Msa0040790;Name=Msa0040790 |
| chr1_1 | mRNA | 71065492 | 71067780 | 71065492 | ID=Msa0040790-mRNA-1;Parent=Msa0040790;Name=Msa0040790-mRNA-1;_AED=0.14;_eAED=0.14;_QI=221|1|1|1|1|1|4|126|300 |
| chr1_1 | exon | 71065492 | 71065908 | 71065492 | ID=Msa0040790-mRNA-1:exon:23476;Parent=Msa0040790-mRNA-1 |
| chr1_1 | exon | 71066356 | 71066456 | 71066356 | ID=Msa0040790-mRNA-1:exon:23477;Parent=Msa0040790-mRNA-1 |
| chr1_1 | exon | 71066590 | 71066792 | 71066590 | ID=Msa0040790-mRNA-1:exon:23478;Parent=Msa0040790-mRNA-1 |
| chr1_1 | exon | 71067252 | 71067780 | 71067252 | ID=Msa0040790-mRNA-1:exon:23479;Parent=Msa0040790-mRNA-1 |
| chr1_1 | five_prime_UTR | 71065492 | 71065712 | 71065492 | ID=Msa0040790-mRNA-1:five_prime_utr;Parent=Msa0040790-mRNA-1 |
| chr1_1 | CDS | 71065713 | 71065908 | 71065713 | ID=Msa0040790-mRNA-1:cds;Parent=Msa0040790-mRNA-1 |
| chr1_1 | CDS | 71066356 | 71066456 | 71066356 | ID=Msa0040790-mRNA-1:cds;Parent=Msa0040790-mRNA-1 |
| chr1_1 | CDS | 71066590 | 71066792 | 71066590 | ID=Msa0040790-mRNA-1:cds;Parent=Msa0040790-mRNA-1 |
| chr1_1 | CDS | 71067252 | 71067654 | 71067252 | ID=Msa0040790-mRNA-1:cds;Parent=Msa0040790-mRNA-1 |
| chr1_1 | three_prime_UTR | 71067655 | 71067780 | 71067655 | ID=Msa0040790-mRNA-1:three_prime_utr;Parent=Msa0040790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
