AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0032020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032020 MtrunA17_Chr1g0190281 97.623 631 15 0 1 631 1 631 0.0 1274
Msa0032020 MtrunA17_Chr7g0274521 73.273 666 133 6 1 629 27 684 0.0 943
Msa0032020 MtrunA17_Chr1g0169341 53.797 632 242 13 3 591 5 629 0.0 630
Msa0032020 MtrunA17_Chr2g0288551 46.743 614 267 10 6 609 26 589 1.46e-173 506
Msa0032020 MtrunA17_Chr1g0169571 43.387 620 280 10 3 611 6 565 3.37e-160 471
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032020 AT3G04470.1 66.614 632 142 12 1 593 1 602 0.0 820
Msa0032020 AT1G04780.1 53.323 647 233 17 3 591 7 642 0.0 639
Msa0032020 AT3G24210.1 53.719 605 240 12 3 589 5 587 0.0 595
Msa0032020 AT1G62050.1 55.891 331 137 3 7 335 18 341 1.42e-117 364
Msa0032020 AT1G62050.1 47.879 165 61 3 441 589 444 599 2.72e-36 144
Msa0032020 AT1G11740.1 56.311 309 128 2 4 312 14 315 8.41e-111 347
Msa0032020 AT1G11740.1 47.590 166 64 3 441 588 365 525 2.31e-36 145

Find 232 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTGATACTTACCGTATT+TGG 0.114269 1_1:+58942350 Msa0032020:CDS
TTATTCCTTCAGACTATAAA+TGG 0.144343 1_1:+58945492 Msa0032020:CDS
AGTGGAAGTTTCGGTGATTT+TGG 0.188164 1_1:-58941695 None:intergenic
TTTCTTCCCATTTGCGATAT+TGG 0.213972 1_1:+58945824 Msa0032020:three_prime_UTR
GGTGGTGACTTCGCCGGGTT+TGG 0.240467 1_1:-58941945 None:intergenic
GTGGTGACTTCGCCGGGTTT+GGG 0.249850 1_1:-58941944 None:intergenic
AGAATTTGAGTTACCTTAAC+AGG 0.258053 1_1:-58943327 None:intergenic
TTCCTATAGTCCCTACTATA+AGG 0.271870 1_1:+58945252 Msa0032020:CDS
TCCATCTCACCGTCCGTCTA+AGG 0.272861 1_1:+58942056 Msa0032020:CDS
CTCTAGCCCTGTCAGCTTCC+AGG 0.283726 1_1:+58945337 Msa0032020:CDS
CATCCTTCTGTTGAATAATA+AGG 0.284963 1_1:-58945786 None:intergenic
TGCAGGACTGTGTTTGTATT+TGG 0.291121 1_1:-58941855 None:intergenic
TGTAGATGTAGATACAAATA+TGG 0.294301 1_1:-58945968 None:intergenic
AGAAGAAGAGTAGGAGAGAT+TGG 0.310226 1_1:-58941628 None:intergenic
CTTTCGATTAGTTGGCTACT+TGG 0.311898 1_1:+58945919 Msa0032020:three_prime_UTR
GGAGCAATTCTACCTATAAA+AGG 0.314811 1_1:-58942328 None:intergenic
TCAAGGAACCTTTCCTGTTA+AGG 0.317238 1_1:+58943314 Msa0032020:CDS
TTTGATTGCTCTTGCTCATA+AGG 0.321958 1_1:+58942513 Msa0032020:CDS
ATCTGAATCTGAAATGAAAA+TGG 0.323705 1_1:-58941815 None:intergenic
GAAGATTCAAACTATCAAAA+TGG 0.330543 1_1:-58946115 None:intergenic
AACGCCGTATGAAGGCAAAA+AGG 0.341141 1_1:+58945534 Msa0032020:CDS
AAAAGTGTCCAGTAAATTCT+TGG 0.350890 1_1:-58945755 None:intergenic
AGGAGATTGCCACGTGTTAT+AGG 0.351839 1_1:+58942241 Msa0032020:CDS
ATCGACCGCCGCGATGTTCC+CGG 0.354525 1_1:+58942019 Msa0032020:CDS
AATCAGAAGGGTCGGCATCC+TGG 0.360234 1_1:+58945375 Msa0032020:CDS
TATGATAATTGTGAAGTTAA+TGG 0.361275 1_1:+58942955 Msa0032020:CDS
TTTGGGGAGAGTGGGGATGG+TGG 0.362236 1_1:-58941927 None:intergenic
TTCATTCGCAATCTCACTTT+CGG 0.364615 1_1:-58942581 None:intergenic
AGACGGAGGTTGTTGGGGAT+TGG 0.364756 1_1:+58942698 Msa0032020:CDS
CGAGACACCACTCACAGAAA+TGG 0.367613 1_1:-58946009 None:intergenic
GAATAACAGAACTCTCAAAA+TGG 0.368703 1_1:-58942306 None:intergenic
TGGTCTTGCCAAGAATTTAC+TGG 0.370695 1_1:+58945747 Msa0032020:three_prime_UTR
TGATCGCTCAATCTCTGGTT+TGG 0.373736 1_1:-58943021 None:intergenic
AGGAGAAGACGGAGGTTGTT+GGG 0.375539 1_1:+58942692 Msa0032020:CDS
TGCCGACCCTTCTGATTCCT+TGG 0.377043 1_1:-58945369 None:intergenic
TGATCCTCCTTCGGAAAATC+AGG 0.378303 1_1:-58943057 None:intergenic
GTGAAATCGAGACGGGTTCC+TGG 0.381401 1_1:+58942760 Msa0032020:CDS
GAAGGAAATTACGAATGCTT+TGG 0.383221 1_1:+58942537 Msa0032020:CDS
GACTCGGTGGTGACTTCGCC+GGG 0.384632 1_1:-58941950 None:intergenic
TCATGATCCAATATCGCAAA+TGG 0.388281 1_1:-58945831 None:intergenic
AGGAAGAGATGGAGTGCATC+AGG 0.389031 1_1:+58945595 Msa0032020:CDS
AGCTTGTTCCGAATCTGAAT+TGG 0.392378 1_1:+58942662 Msa0032020:CDS
GTAACAATTACCCTTATAGT+AGG 0.393857 1_1:-58945263 None:intergenic
CGTGCTGATATGACTTTAGC+TGG 0.396670 1_1:+58942391 Msa0032020:CDS
GGTCGGCATCCTGGGTTTCA+TGG 0.404747 1_1:+58945384 Msa0032020:CDS
GTTTGCTAAGATATCAAGTA+AGG 0.405545 1_1:-58943241 None:intergenic
TTTGCTGATCGCTCAATCTC+TGG 0.408381 1_1:-58943026 None:intergenic
CAAACAAGGTGAAGGCTATT+CGG 0.411901 1_1:+58943259 Msa0032020:CDS
AAAGAGAAGAAGGGTTGGTT+TGG 0.413285 1_1:+58942985 Msa0032020:CDS
AATCTCGGCGGAGAGAGATT+CGG 0.414101 1_1:-58941972 None:intergenic
TATTCACAGTCACAGATATA+AGG 0.414495 1_1:+58945451 Msa0032020:CDS
TTCGCCGGGTTTGGGGAGAG+TGG 0.417314 1_1:-58941936 None:intergenic
AGAAGAAGGGTTGGTTTGGA+TGG 0.419549 1_1:+58942989 Msa0032020:CDS
TGGCACCACGTTTCCAAATA+CGG 0.419702 1_1:-58942363 None:intergenic
AGAAAGAAGAGTGGAAGTTT+CGG 0.421968 1_1:-58941704 None:intergenic
GTGTTATAGGTTCCGCTTCG+CGG 0.422474 1_1:+58942254 Msa0032020:CDS
TGGCAATCTCCTGCACCATT+TGG 0.423961 1_1:-58942230 None:intergenic
ATTTCCCCGTGATCCTCCTT+CGG 0.429547 1_1:-58943066 None:intergenic
TCTCGGTGAGGGTTATGCTT+CGG 0.429816 1_1:+58942459 Msa0032020:CDS
CAGGAGAAGACGGAGGTTGT+TGG 0.430865 1_1:+58942691 Msa0032020:CDS
TACTCTTTACATTTCCTCTC+TGG 0.432842 1_1:-58945690 None:intergenic
GACGAGGAACCTGGAGCAGC+AGG 0.432854 1_1:+58942904 Msa0032020:CDS
AATCCTCCTCCTGCTGCTCC+AGG 0.433201 1_1:-58942913 None:intergenic
AGATACAAATATGGGTATCT+TGG 0.433241 1_1:-58945959 None:intergenic
AACCTCTTGCTTGGTCCAAA+TGG 0.435745 1_1:+58942215 Msa0032020:CDS
TTATGATATGCTCAATGTTA+TGG 0.436490 1_1:+58942732 Msa0032020:CDS
GGCTTTGAGGATGGGGAACT+CGG 0.436643 1_1:+58942867 Msa0032020:CDS
ATGACTTTAGCTGGTTTCGA+TGG 0.437930 1_1:+58942400 Msa0032020:CDS
CATCAGGGGAGTGATGATTT+CGG 0.442245 1_1:+58945611 Msa0032020:CDS
TCGCCGGGTTTGGGGAGAGT+GGG 0.443416 1_1:-58941935 None:intergenic
TCCTATAGTCCCTACTATAA+GGG 0.445640 1_1:+58945253 Msa0032020:CDS
AGTCATATCAGCACGAAGAT+TGG 0.446768 1_1:-58942383 None:intergenic
ATAAGAATCTCGGCGGCGAT+TGG 0.446879 1_1:-58942082 None:intergenic
GTTGTGGCCTTTCGATTAGT+TGG 0.447022 1_1:+58945911 Msa0032020:three_prime_UTR
TGCTGAGGAGAGAGTGCAAT+TGG 0.447314 1_1:+58942840 Msa0032020:CDS
GGGTTTGGGGAGAGTGGGGA+TGG 0.453205 1_1:-58941930 None:intergenic
ATCAGAAGGGTCGGCATCCT+GGG 0.454380 1_1:+58945376 Msa0032020:CDS
ATGAAAGGAAGAAGAAGAGT+AGG 0.455947 1_1:-58941637 None:intergenic
GTCTTCAAAACGAACAAGGC+TGG 0.459169 1_1:+58942125 Msa0032020:CDS
GGAGAGAGTGCAATTGGATT+CGG 0.459225 1_1:+58942846 Msa0032020:CDS
TTATGTCCGCCGGCGCCGAT+TGG 0.460473 1_1:+58942101 Msa0032020:CDS
TGCAATTGGATTCGGCTTTG+AGG 0.460887 1_1:+58942854 Msa0032020:CDS
GTTTGTCAAGACGAGGAACC+TGG 0.461453 1_1:+58942895 Msa0032020:CDS
GATATTATCAACCTCTTGCT+TGG 0.461971 1_1:+58942206 Msa0032020:CDS
GGCGGAGGGAGGCGTGGTCG+CGG 0.463424 1_1:-58941895 None:intergenic
GATTTGATCGGCTTGAATCT+CGG 0.465942 1_1:-58941987 None:intergenic
GAGACACCACTCACAGAAAT+GGG 0.466878 1_1:-58946008 None:intergenic
TGGTGGAGATGAGACGGCGG+AGG 0.466931 1_1:-58941910 None:intergenic
TGGTGTGGTTAAAGAGAAGA+AGG 0.467370 1_1:+58942975 Msa0032020:CDS
CATGAAGGCGGAGGGACAGT+TGG 0.468510 1_1:-58941592 None:intergenic
ATGAAGGCGGAGGGACAGTT+GGG 0.469683 1_1:-58941591 None:intergenic
TGGGTTTCGAATTCAGCGTT+CGG 0.472090 1_1:+58942420 Msa0032020:CDS
TGGATTCGGCTTTGAGGATG+GGG 0.473081 1_1:+58942860 Msa0032020:CDS
ACCCTTATAGTAGGGACTAT+AGG 0.475970 1_1:-58945254 None:intergenic
GGAGAGATTGGATCTAGAAA+AGG 0.479212 1_1:-58941616 None:intergenic
TGACGCCTCCAATTCAGATT+CGG 0.479238 1_1:-58942670 None:intergenic
TTGGATTCGGCTTTGAGGAT+GGG 0.482902 1_1:+58942859 Msa0032020:CDS
CATTTCTGTGAGTGGTGTCT+CGG 0.483836 1_1:+58946010 Msa0032020:three_prime_UTR
ATGGAGAGGTGTTTCTCGAC+CGG 0.485743 1_1:-58942038 None:intergenic
TTAGCATCCTGGAAGCTGAC+AGG 0.487103 1_1:-58945344 None:intergenic
GCAGCAGGAGGAGGATTTGA+TGG 0.487668 1_1:+58942919 Msa0032020:CDS
ATTGGATTCGGCTTTGAGGA+TGG 0.490095 1_1:+58942858 Msa0032020:CDS
GAATCTGAATTGGAGGCGTC+AGG 0.490960 1_1:+58942672 Msa0032020:CDS
ACAAAGAAAAGAAAGAAGAG+TGG 0.492784 1_1:-58941713 None:intergenic
GGACTCGGTGGTGACTTCGC+CGG 0.494683 1_1:-58941951 None:intergenic
TGGTGACTTCGCCGGGTTTG+GGG 0.497281 1_1:-58941943 None:intergenic
AGGGACAGTTGGGACAGAAC+TGG 0.498066 1_1:-58941581 None:intergenic
TATTCCTTCAGACTATAAAT+GGG 0.499614 1_1:+58945493 Msa0032020:CDS
ACGAATGCTTTGGAAGGGGC+TGG 0.501439 1_1:+58942547 Msa0032020:CDS
CCCTTAGACGGACGGTGAGA+TGG 0.504204 1_1:-58942057 None:intergenic
TTGTTCCGAATCTGAATTGG+AGG 0.505341 1_1:+58942665 Msa0032020:CDS
TTGCTTGGTCCAAATGGTGC+AGG 0.506074 1_1:+58942221 Msa0032020:CDS
CCATCTCACCGTCCGTCTAA+GGG 0.509202 1_1:+58942057 Msa0032020:CDS
GAGGGTTATGCTTCGGAGGA+TGG 0.510813 1_1:+58942466 Msa0032020:CDS
TTTAAGACAGCCACGTGTGC+AGG 0.515277 1_1:-58941872 None:intergenic
GAACCTGGAGCAGCAGGAGG+AGG 0.516961 1_1:+58942910 Msa0032020:CDS
GCCGAGATTCTTATGTCCGC+CGG 0.518417 1_1:+58942091 Msa0032020:CDS
CGCCGGGTTTGGGGAGAGTG+GGG 0.518655 1_1:-58941934 None:intergenic
TGACTTTAGCTGGTTTCGAT+GGG 0.523491 1_1:+58942401 Msa0032020:CDS
TGGGGATGGTGGAGATGAGA+CGG 0.524520 1_1:-58941916 None:intergenic
TGAGAGGAAACGCCGTATGA+AGG 0.525390 1_1:+58945526 Msa0032020:CDS
TTGAGGATGGGGAACTCGGA+TGG 0.526848 1_1:+58942871 Msa0032020:CDS
GGAAGAGATGGAGTGCATCA+GGG 0.528462 1_1:+58945596 Msa0032020:CDS
TTGAAGACTCCAATCGGCGC+CGG 0.528698 1_1:-58942110 None:intergenic
TCAGACGAATATGTATCGTC+CGG 0.529008 1_1:+58942618 Msa0032020:CDS
GGAGGTTGTTGGGGATTGGA+AGG 0.529410 1_1:+58942702 Msa0032020:CDS
AAGAAACAGACTGTTGCTAA+AGG 0.529478 1_1:+58945575 Msa0032020:CDS
CATGATCCAATATCGCAAAT+GGG 0.530515 1_1:-58945830 None:intergenic
CTGGAGTTCTCTTCAAGAAG+CGG 0.530772 1_1:+58942144 Msa0032020:CDS
ATCCCCACTCTCCCCAAACC+CGG 0.535708 1_1:+58941932 Msa0032020:CDS
ATTCCTTGGATTTAGCATCC+TGG 0.540994 1_1:-58945355 None:intergenic
TTGAGTTACCTTAACAGGAA+AGG 0.542185 1_1:-58943322 None:intergenic
CAGACGAATATGTATCGTCC+GGG 0.542700 1_1:+58942619 Msa0032020:CDS
TTCGCAATCTCACTTTCGGT+CGG 0.544449 1_1:-58942577 None:intergenic
AGAAAAGGACATGAAGGCGG+AGG 0.545010 1_1:-58941601 None:intergenic
TGCTCTTGCTCATAAGGAGA+AGG 0.545465 1_1:+58942519 Msa0032020:CDS
AACATCGCGGCGGTCGATGA+CGG 0.550894 1_1:-58942014 None:intergenic
GGTGGAGATGAGACGGCGGA+GGG 0.551483 1_1:-58941909 None:intergenic
GGGGAAATGAAATCAAAGAA+AGG 0.551671 1_1:+58943081 Msa0032020:CDS
TAGTCTGAAGGAATAATGAA+AGG 0.552472 1_1:-58945485 None:intergenic
TCCTGGGTTTCATGGATGAA+AGG 0.554595 1_1:+58945392 Msa0032020:CDS
TGGTTAAAGAGAAGAAGGGT+TGG 0.555124 1_1:+58942980 Msa0032020:CDS
TCTTGTGTCAACCACAAGAC+AGG 0.557144 1_1:-58943189 None:intergenic
GGAGATGAGACGGCGGAGGG+AGG 0.557806 1_1:-58941906 None:intergenic
AGAAGCTCATCTGTCTTCAA+AGG 0.559793 1_1:-58943216 None:intergenic
TGATCTCCCATTTCTGTGAG+TGG 0.560675 1_1:+58946002 Msa0032020:three_prime_UTR
GATCCTTATTATTCAACAGA+AGG 0.560738 1_1:+58945783 Msa0032020:three_prime_UTR
ATTTGAGGAGCTTCAGACAC+CGG 0.561298 1_1:+58945295 Msa0032020:CDS
AAATTACGAATGCTTTGGAA+GGG 0.561569 1_1:+58942542 Msa0032020:CDS
GCCGGCGGACATAAGAATCT+CGG 0.562029 1_1:-58942092 None:intergenic
ACTGTTGCTAAAGGAAGAGA+TGG 0.562544 1_1:+58945584 Msa0032020:CDS
TAACAATTACCCTTATAGTA+GGG 0.564302 1_1:-58945262 None:intergenic
GAAGAGATGGAGTGCATCAG+GGG 0.566509 1_1:+58945597 Msa0032020:CDS
AGTCTGAAGGAATAATGAAA+GGG 0.566703 1_1:-58945484 None:intergenic
AGTGGAGTTGAAAACTCCTC+CGG 0.566862 1_1:-58945314 None:intergenic
ATTTCAGATTCAGATTCAGA+TGG 0.567756 1_1:+58941823 Msa0032020:exon
TTGGAGGCGTCAGGAGAAGA+CGG 0.567822 1_1:+58942681 Msa0032020:CDS
TCCTTTCATCCATGAAACCC+AGG 0.568104 1_1:-58945393 None:intergenic
GAAATTACGAATGCTTTGGA+AGG 0.571537 1_1:+58942541 Msa0032020:CDS
GGAGGAGGATTTGATGGTCG+CGG 0.571617 1_1:+58942925 Msa0032020:CDS
ATCCAAGGAATCAGAAGGGT+CGG 0.572870 1_1:+58945367 Msa0032020:CDS
CGGTGAGGGTTATGCTTCGG+AGG 0.575807 1_1:+58942462 Msa0032020:CDS
AAGACTCCAATCGGCGCCGG+CGG 0.576047 1_1:-58942107 None:intergenic
GGAGAAGACGGAGGTTGTTG+GGG 0.576791 1_1:+58942693 Msa0032020:CDS
TGTTGGGGATTGGAAGGCGA+AGG 0.578684 1_1:+58942708 Msa0032020:CDS
TAGCATCCTGGAAGCTGACA+GGG 0.578906 1_1:-58945343 None:intergenic
TCCACCCATTTATAGTCTGA+AGG 0.582960 1_1:-58945497 None:intergenic
CAAATACGGTAAGTATCAGA+AGG 0.586516 1_1:-58942349 None:intergenic
GTAGATGTAGATACAAATAT+GGG 0.586927 1_1:-58945967 None:intergenic
AAGTGAAAATGAAGAGGTTG+TGG 0.587479 1_1:+58945895 Msa0032020:three_prime_UTR
TGAGACGGCGGAGGGAGGCG+TGG 0.587789 1_1:-58941901 None:intergenic
CGGCGATTGGATCCCTTAGA+CGG 0.588807 1_1:-58942069 None:intergenic
CACCATTTGGACCAAGCAAG+AGG 0.590797 1_1:-58942217 None:intergenic
GCTAAATCCAAGGAATCAGA+AGG 0.590935 1_1:+58945362 Msa0032020:CDS
AATTACGAATGCTTTGGAAG+GGG 0.591683 1_1:+58942543 Msa0032020:CDS
TCCTTCAGACTATAAATGGG+TGG 0.594726 1_1:+58945496 Msa0032020:CDS
AAGCTGACAGGGCTAGAGAG+TGG 0.597907 1_1:-58945332 None:intergenic
AATGAAATCAAAGAAAGGAA+AGG 0.599864 1_1:+58943086 Msa0032020:CDS
GAGGAACCTGGAGCAGCAGG+AGG 0.600260 1_1:+58942907 Msa0032020:CDS
CTTCCAGGATGCTAAATCCA+AGG 0.600724 1_1:+58945352 Msa0032020:CDS
GGCGGAGAGAGATTCGGACT+CGG 0.600962 1_1:-58941966 None:intergenic
TCCGGGGATTGATGTTACTC+AGG 0.601161 1_1:+58942636 Msa0032020:CDS
GGTGAGTGTGAAATCGAGAC+GGG 0.602172 1_1:+58942753 Msa0032020:CDS
CAAACACAGTCCTGCACACG+TGG 0.602893 1_1:+58941862 Msa0032020:CDS
TGGAGAGGTGTTTCTCGACC+GGG 0.603007 1_1:-58942037 None:intergenic
GGATCTAGAAAAGGACATGA+AGG 0.603453 1_1:-58941607 None:intergenic
TGTATCTACATCTACATCGA+TGG 0.604588 1_1:+58945975 Msa0032020:three_prime_UTR
CAAGTAGCCAACTAATCGAA+AGG 0.604874 1_1:-58945918 None:intergenic
AGACGGACGGTGAGATGGAG+AGG 0.606515 1_1:-58942052 None:intergenic
TTTGCTAAGATATCAAGTAA+GGG 0.608599 1_1:-58943240 None:intergenic
GATGACGGAGGAGATTTGAT+CGG 0.609059 1_1:-58941999 None:intergenic
GAATTATACCACTAGTATTG+TGG 0.610492 1_1:+58945635 Msa0032020:exon
AATGGGTGGATGCAAATGAG+AGG 0.613093 1_1:+58945510 Msa0032020:CDS
TCTTCGTCATTCAAAGCACC+AGG 0.618610 1_1:-58942778 None:intergenic
TGGAGTCTTCAAAACGAACA+AGG 0.618942 1_1:+58942121 Msa0032020:CDS
TATCTTAGCAAACAAGGTGA+AGG 0.619308 1_1:+58943251 Msa0032020:CDS
AAAATCACGAATCCGCGAAG+CGG 0.622628 1_1:-58942266 None:intergenic
GCCTGAGTAACATCAATCCC+CGG 0.623504 1_1:-58942637 None:intergenic
GGTGTGGTTAAAGAGAAGAA+GGG 0.630158 1_1:+58942976 Msa0032020:CDS
TGGTGCTTTGAATGACGAAG+AGG 0.631423 1_1:+58942780 Msa0032020:CDS
TGGTGAGTGTGAAATCGAGA+CGG 0.631692 1_1:+58942752 Msa0032020:CDS
CAAATATACCACAATACTAG+TGG 0.634714 1_1:-58945643 None:intergenic
GAAAAGGACATGAAGGCGGA+GGG 0.635578 1_1:-58941600 None:intergenic
ACTTACCGTATTTGGAAACG+TGG 0.650073 1_1:+58942358 Msa0032020:CDS
CTGACAACTAAACTTCCTCA+AGG 0.651345 1_1:+58943297 Msa0032020:CDS
ATCGCGGCGGTCGATGACGG+AGG 0.652658 1_1:-58942011 None:intergenic
ACTTGATATCTTAGCAAACA+AGG 0.654562 1_1:+58943245 Msa0032020:CDS
GGGGATTGATGTTACTCAGG+CGG 0.655916 1_1:+58942639 Msa0032020:CDS
AATGTGAAGTGAAAATGAAG+AGG 0.656704 1_1:+58945889 Msa0032020:three_prime_UTR
GGATGGTGGAGATGAGACGG+CGG 0.660026 1_1:-58941913 None:intergenic
TTAACAGGAAAGGTTCCTTG+AGG 0.674558 1_1:-58943312 None:intergenic
TTTGATAATCGTTGCCAGAG+AGG 0.676777 1_1:+58945676 Msa0032020:three_prime_UTR
TCATGGATGAAAGGAAGTCG+TGG 0.678183 1_1:+58945401 Msa0032020:CDS
AGACGAATATGTATCGTCCG+GGG 0.679025 1_1:+58942620 Msa0032020:CDS
GATTGGATCCCTTAGACGGA+CGG 0.680680 1_1:-58942065 None:intergenic
TAATTGTGAAGTTAATGGTG+TGG 0.681790 1_1:+58942960 Msa0032020:CDS
TGAGGAGCTTCAGACACCGG+AGG 0.682501 1_1:+58945298 Msa0032020:CDS
GGAGAGAGATTCGGACTCGG+TGG 0.683282 1_1:-58941963 None:intergenic
GGATGGTGTTTGTCAAGACG+AGG 0.696399 1_1:+58942888 Msa0032020:CDS
TCTAGAAAAGGACATGAAGG+CGG 0.704450 1_1:-58941604 None:intergenic
TGATGATGTGTTGACTGCTG+AGG 0.705268 1_1:+58942825 Msa0032020:CDS
GGCGGACATAAGAATCTCGG+CGG 0.718650 1_1:-58942089 None:intergenic
TTTCTCGACCGGGAACATCG+CGG 0.722361 1_1:-58942027 None:intergenic
GGTAATGTGACGCTACCGCG+TGG 0.722580 1_1:+58942487 Msa0032020:CDS
CTAAATCCAAGGAATCAGAA+GGG 0.725626 1_1:+58945363 Msa0032020:CDS
AGTGAGAGTGAGTTCAAACG+AGG 0.726522 1_1:+58943159 Msa0032020:CDS
CTCGACCGGGAACATCGCGG+CGG 0.741851 1_1:-58942024 None:intergenic
TTGATCGGCTTGAATCTCGG+CGG 0.742337 1_1:-58941984 None:intergenic
GAAGCGGAACCTATAACACG+TGG 0.748077 1_1:-58942250 None:intergenic
GAGGCGTCAGGAGAAGACGG+AGG 0.754379 1_1:+58942684 Msa0032020:CDS
GAGGTGTAAGACCTGTCTTG+TGG 0.769541 1_1:+58943178 Msa0032020:CDS
AGAGCAATCAAAGAACCACG+CGG 0.841115 1_1:-58942502 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTTATGTAATTTATATA+TGG - chr1_1:58944058-58944077 None:intergenic 10.0%
!!! ATCATTATTTAAGATATTAA+TGG + chr1_1:58944563-58944582 Msa0032020:intron 10.0%
!!! TTTCTTATTTTTCTTAATTT+TGG - chr1_1:58945561-58945580 None:intergenic 10.0%
!! ACAGAAAATTGTTAAAAAAA+AGG - chr1_1:58943889-58943908 None:intergenic 15.0%
!! TCTATAATGAAAAATAGAAA+AGG - chr1_1:58944830-58944849 None:intergenic 15.0%
!!! AAAAAATGAAAGTGTAAAGT+TGG - chr1_1:58941750-58941769 None:intergenic 20.0%
!!! TAGTATATAAGATTTTGTAG+TGG - chr1_1:58941785-58941804 None:intergenic 20.0%
!! TATGATAATTGTGAAGTTAA+TGG + chr1_1:58942955-58942974 Msa0032020:CDS 20.0%
!! TTGAAAAAGAAAAAGAAGAA+AGG + chr1_1:58943117-58943136 Msa0032020:CDS 20.0%
!! CTTGTTAGGATATATAATAA+AGG - chr1_1:58943676-58943695 None:intergenic 20.0%
!! ATGATTGTTCTATCAATTTA+GGG + chr1_1:58943763-58943782 Msa0032020:intron 20.0%
!!! TGTGACATTTTTGTTATAAA+GGG + chr1_1:58943945-58943964 Msa0032020:intron 20.0%
!!! AATTTCATTTTGCATTATTG+AGG - chr1_1:58944024-58944043 None:intergenic 20.0%
!! AATGCAAAATGAAATTACAT+TGG + chr1_1:58944028-58944047 Msa0032020:intron 20.0%
!! TAAGAAATAAAGAACTTTCA+AGG - chr1_1:58944362-58944381 None:intergenic 20.0%
!!! GAAAGTTCTTTATTTCTTAT+TGG + chr1_1:58944363-58944382 Msa0032020:intron 20.0%
!!! AAATATTGATGGTTTTCTAT+GGG + chr1_1:58944491-58944510 Msa0032020:intron 20.0%
!!! GTCACATATTTTAAATAGAA+TGG - chr1_1:58944529-58944548 None:intergenic 20.0%
!!! TATCTCTAAAATGTTCAAAA+AGG - chr1_1:58944998-58945017 None:intergenic 20.0%
!!! TGTTACTTTTACAAAATTTG+AGG + chr1_1:58945280-58945299 Msa0032020:CDS 20.0%
! AAAGTGTAGCTAAAAATGAA+AGG - chr1_1:58941655-58941674 None:intergenic 25.0%
!! ATCTGAATCTGAAATGAAAA+TGG - chr1_1:58941818-58941837 None:intergenic 25.0%
!! AGTTCTGTTATTCCTTTTAT+AGG + chr1_1:58942316-58942335 Msa0032020:CDS 25.0%
! TTATGATATGCTCAATGTTA+TGG + chr1_1:58942732-58942751 Msa0032020:CDS 25.0%
! AATGAAATCAAAGAAAGGAA+AGG + chr1_1:58943086-58943105 Msa0032020:CDS 25.0%
! TTTGCTAAGATATCAAGTAA+GGG - chr1_1:58943243-58943262 None:intergenic 25.0%
!!! GTTCTTTATTTTACAGCAAT+AGG + chr1_1:58943581-58943600 Msa0032020:intron 25.0%
! ATAATTAGTAGTTAAGAGTG+GGG - chr1_1:58943653-58943672 None:intergenic 25.0%
! GATAATTAGTAGTTAAGAGT+GGG - chr1_1:58943654-58943673 None:intergenic 25.0%
! ATCCTAACAAGATACATTAA+AGG + chr1_1:58943685-58943704 Msa0032020:intron 25.0%
! ATCCTTTAATGTATCTTGTT+AGG - chr1_1:58943690-58943709 None:intergenic 25.0%
! GATGATTGTTCTATCAATTT+AGG + chr1_1:58943762-58943781 Msa0032020:intron 25.0%
!! ATGTCACAGTATTTTCATTA+TGG - chr1_1:58943933-58943952 None:intergenic 25.0%
!!! CTGTGACATTTTTGTTATAA+AGG + chr1_1:58943944-58943963 Msa0032020:intron 25.0%
!!! GTGACATTTTTGTTATAAAG+GGG + chr1_1:58943946-58943965 Msa0032020:intron 25.0%
!! ATGACATTTTGCATTATGAT+AGG - chr1_1:58944084-58944103 None:intergenic 25.0%
!!! AAAATTGGTTTTTCTTTGAC+AGG - chr1_1:58944186-58944205 None:intergenic 25.0%
!! TGTCAAAGAAAAACCAATTT+TGG + chr1_1:58944185-58944204 Msa0032020:intron 25.0%
! TACTACATGAGAATGAAAAT+AGG + chr1_1:58944271-58944290 Msa0032020:intron 25.0%
! AAATAAAGAACTTTCAAGGA+GGG - chr1_1:58944358-58944377 None:intergenic 25.0%
!! GTTCTTTATTTCTTATTGGT+TGG + chr1_1:58944367-58944386 Msa0032020:intron 25.0%
!! TTTATTTCTTATTGGTTGGT+TGG + chr1_1:58944371-58944390 Msa0032020:intron 25.0%
!! TTATTTCTTATTGGTTGGTT+GGG + chr1_1:58944372-58944391 Msa0032020:intron 25.0%
! CATAGAAAACCATCAATATT+TGG - chr1_1:58944492-58944511 None:intergenic 25.0%
!!! CAAATATTGATGGTTTTCTA+TGG + chr1_1:58944490-58944509 Msa0032020:intron 25.0%
!!! AATATTGATGGTTTTCTATG+GGG + chr1_1:58944492-58944511 Msa0032020:intron 25.0%
! AATTAGCACAAAGATTCAAA+GGG - chr1_1:58944605-58944624 None:intergenic 25.0%
!!! TCAGATTTTAATCTACAGAA+GGG - chr1_1:58944719-58944738 None:intergenic 25.0%
!!! TTCAGATTTTAATCTACAGA+AGG - chr1_1:58944720-58944739 None:intergenic 25.0%
!! TAGTTCTTTTACTTGCATTA+TGG + chr1_1:58944945-58944964 Msa0032020:intron 25.0%
! TAACAATTACCCTTATAGTA+GGG - chr1_1:58945265-58945284 None:intergenic 25.0%
! TTATTCCTTCAGACTATAAA+TGG + chr1_1:58945492-58945511 Msa0032020:CDS 25.0%
! TATTCCTTCAGACTATAAAT+GGG + chr1_1:58945493-58945512 Msa0032020:CDS 25.0%
! GGAAGAAAAAAAAAACGTAA+AGG - chr1_1:58945812-58945831 None:intergenic 25.0%
! GTAGATGTAGATACAAATAT+GGG - chr1_1:58945970-58945989 None:intergenic 25.0%
! TGTAGATGTAGATACAAATA+TGG - chr1_1:58945971-58945990 None:intergenic 25.0%
!!! TTGTTTTACTCATCAAGTTT+AGG + chr1_1:58946043-58946062 Msa0032020:three_prime_UTR 25.0%
! GAAGATTCAAACTATCAAAA+TGG - chr1_1:58946118-58946137 None:intergenic 25.0%
ACAAAGAAAAGAAAGAAGAG+TGG - chr1_1:58941716-58941735 None:intergenic 30.0%
!! TATAAGATTTTGTAGTGGAG+TGG - chr1_1:58941780-58941799 None:intergenic 30.0%
ATTTCAGATTCAGATTCAGA+TGG + chr1_1:58941823-58941842 Msa0032020:exon 30.0%
GAATAACAGAACTCTCAAAA+TGG - chr1_1:58942309-58942328 None:intergenic 30.0%
!!! GATCAGAGTTTTTTGTTTCT+CGG + chr1_1:58942442-58942461 Msa0032020:CDS 30.0%
!! AAATTACGAATGCTTTGGAA+GGG + chr1_1:58942542-58942561 Msa0032020:CDS 30.0%
TAATTGTGAAGTTAATGGTG+TGG + chr1_1:58942960-58942979 Msa0032020:CDS 30.0%
! GTTTGCTAAGATATCAAGTA+AGG - chr1_1:58943244-58943263 None:intergenic 30.0%
ACTTGATATCTTAGCAAACA+AGG + chr1_1:58943245-58943264 Msa0032020:CDS 30.0%
! AGAATTTGAGTTACCTTAAC+AGG - chr1_1:58943330-58943349 None:intergenic 30.0%
TTACAGCTAACTAATCTTGT+CGG - chr1_1:58943434-58943453 None:intergenic 30.0%
ATTCTTTCTTGCTCAAAGAA+AGG - chr1_1:58943501-58943520 None:intergenic 30.0%
TAATTAGTAGTTAAGAGTGG+GGG - chr1_1:58943652-58943671 None:intergenic 30.0%
GGATAATTAGTAGTTAAGAG+TGG - chr1_1:58943655-58943674 None:intergenic 30.0%
! CTATCAATTTAGGGTTTCTT+TGG + chr1_1:58943772-58943791 Msa0032020:intron 30.0%
! TTTGTTATAAAGGGGAAAAG+AGG + chr1_1:58943954-58943973 Msa0032020:intron 30.0%
TTCTCAAACCAAACAAACTA+AGG + chr1_1:58943996-58944015 Msa0032020:intron 30.0%
TCAAACTAGTCCCTAAATTA+AGG + chr1_1:58944133-58944152 Msa0032020:intron 30.0%
ATGCAAAATGTCACCAAAAT+TGG - chr1_1:58944201-58944220 None:intergenic 30.0%
AATAAAGAACTTTCAAGGAG+GGG - chr1_1:58944357-58944376 None:intergenic 30.0%
GAAATAAAGAACTTTCAAGG+AGG - chr1_1:58944359-58944378 None:intergenic 30.0%
TCTTTCTCTATTGTCATAAG+TGG + chr1_1:58944430-58944449 Msa0032020:intron 30.0%
CTTTCTCTATTGTCATAAGT+GGG + chr1_1:58944431-58944450 Msa0032020:intron 30.0%
! ATCAATATTTGGAACTAGAC+TGG - chr1_1:58944481-58944500 None:intergenic 30.0%
! AGTCTAGTTCCAAATATTGA+TGG + chr1_1:58944480-58944499 Msa0032020:intron 30.0%
CAATTAGCACAAAGATTCAA+AGG - chr1_1:58944606-58944625 None:intergenic 30.0%
AAGCGTTATTCAAATTGTAG+CGG + chr1_1:58944802-58944821 Msa0032020:intron 30.0%
! CTTTTACTTGCATTATGGAA+AGG + chr1_1:58944950-58944969 Msa0032020:intron 30.0%
! TAGGATGTATTTTCATATGC+TGG + chr1_1:58945041-58945060 Msa0032020:intron 30.0%
ATGTTGTGTCAGTATTTGTA+TGG + chr1_1:58945175-58945194 Msa0032020:intron 30.0%
GTAACAATTACCCTTATAGT+AGG - chr1_1:58945266-58945285 None:intergenic 30.0%
TATTCACAGTCACAGATATA+AGG + chr1_1:58945451-58945470 Msa0032020:CDS 30.0%
AGTCTGAAGGAATAATGAAA+GGG - chr1_1:58945487-58945506 None:intergenic 30.0%
TAGTCTGAAGGAATAATGAA+AGG - chr1_1:58945488-58945507 None:intergenic 30.0%
GAATTATACCACTAGTATTG+TGG + chr1_1:58945635-58945654 Msa0032020:exon 30.0%
CAAATATACCACAATACTAG+TGG - chr1_1:58945646-58945665 None:intergenic 30.0%
! ACTATACTTTTCACATTGGA+TGG + chr1_1:58945727-58945746 Msa0032020:three_prime_UTR 30.0%
!! AAAAGTGTCCAGTAAATTCT+TGG - chr1_1:58945758-58945777 None:intergenic 30.0%
GATCCTTATTATTCAACAGA+AGG + chr1_1:58945783-58945802 Msa0032020:three_prime_UTR 30.0%
CATCCTTCTGTTGAATAATA+AGG - chr1_1:58945789-58945808 None:intergenic 30.0%
AATGTGAAGTGAAAATGAAG+AGG + chr1_1:58945889-58945908 Msa0032020:three_prime_UTR 30.0%
AGATACAAATATGGGTATCT+TGG - chr1_1:58945962-58945981 None:intergenic 30.0%
ATGAAAGGAAGAAGAAGAGT+AGG - chr1_1:58941640-58941659 None:intergenic 35.0%
AGAAAGAAGAGTGGAAGTTT+CGG - chr1_1:58941707-58941726 None:intergenic 35.0%
!!! TTCGTTTTGAAGACTCCAAT+CGG - chr1_1:58942119-58942138 None:intergenic 35.0%
GATATTATCAACCTCTTGCT+TGG + chr1_1:58942206-58942225 Msa0032020:CDS 35.0%
! GCGGATTCGTGATTTTTATA+TGG + chr1_1:58942273-58942292 Msa0032020:CDS 35.0%
GGAGCAATTCTACCTATAAA+AGG - chr1_1:58942331-58942350 None:intergenic 35.0%
CAAATACGGTAAGTATCAGA+AGG - chr1_1:58942352-58942371 None:intergenic 35.0%
CTTCTGATACTTACCGTATT+TGG + chr1_1:58942350-58942369 Msa0032020:CDS 35.0%
!!! AGTTTTTTGTTTCTCGGTGA+GGG + chr1_1:58942448-58942467 Msa0032020:CDS 35.0%
TTTGATTGCTCTTGCTCATA+AGG + chr1_1:58942513-58942532 Msa0032020:CDS 35.0%
GAAGGAAATTACGAATGCTT+TGG + chr1_1:58942537-58942556 Msa0032020:CDS 35.0%
! GAAATTACGAATGCTTTGGA+AGG + chr1_1:58942541-58942560 Msa0032020:CDS 35.0%
!! AATTACGAATGCTTTGGAAG+GGG + chr1_1:58942543-58942562 Msa0032020:CDS 35.0%
TTCATTCGCAATCTCACTTT+CGG - chr1_1:58942584-58942603 None:intergenic 35.0%
GGGGAAATGAAATCAAAGAA+AGG + chr1_1:58943081-58943100 Msa0032020:CDS 35.0%
TATCTTAGCAAACAAGGTGA+AGG + chr1_1:58943251-58943270 Msa0032020:CDS 35.0%
TTGAGTTACCTTAACAGGAA+AGG - chr1_1:58943325-58943344 None:intergenic 35.0%
ATGAATGCTGAGTGATCAAA+AGG + chr1_1:58943532-58943551 Msa0032020:intron 35.0%
AATTAGTAGTTAAGAGTGGG+GGG - chr1_1:58943651-58943670 None:intergenic 35.0%
!! TGACCAGAATAATGGACATT+TGG - chr1_1:58943739-58943758 None:intergenic 35.0%
TCATCAGATGACCAGAATAA+TGG - chr1_1:58943747-58943766 None:intergenic 35.0%
!! TTGAGGAACCTTAGTTTGTT+TGG - chr1_1:58944007-58944026 None:intergenic 35.0%
TTAGTCTCAGTCATGCAAAA+TGG + chr1_1:58944108-58944127 Msa0032020:intron 35.0%
GATGACATACATGAATGTAG+AGG - chr1_1:58944164-58944183 None:intergenic 35.0%
ATAAAGAACTTTCAAGGAGG+GGG - chr1_1:58944356-58944375 None:intergenic 35.0%
ACTCATGCACTATCAAAGAA+AGG - chr1_1:58944405-58944424 None:intergenic 35.0%
! AATATTTGGAACTAGACTGG+TGG - chr1_1:58944478-58944497 None:intergenic 35.0%
TTCAAAGGGAGAAACAAACT+AGG - chr1_1:58944591-58944610 None:intergenic 35.0%
GCTACAATTTGAATAACGCT+TGG - chr1_1:58944803-58944822 None:intergenic 35.0%
GTTCAAAAAGGATAAGACAG+CGG - chr1_1:58944986-58945005 None:intergenic 35.0%
CAAACAAGTCAGATGCATAT+AGG + chr1_1:58945022-58945041 Msa0032020:intron 35.0%
!! ACATTTTACAAGAGCACGAT+AGG - chr1_1:58945159-58945178 None:intergenic 35.0%
GTGTCAGTATTTGTATGGTA+CGG + chr1_1:58945180-58945199 Msa0032020:intron 35.0%
TTCCTATAGTCCCTACTATA+AGG + chr1_1:58945252-58945271 Msa0032020:CDS 35.0%
TCCTATAGTCCCTACTATAA+GGG + chr1_1:58945253-58945272 Msa0032020:CDS 35.0%
CTAAATCCAAGGAATCAGAA+GGG + chr1_1:58945363-58945382 Msa0032020:CDS 35.0%
AAGAAACAGACTGTTGCTAA+AGG + chr1_1:58945575-58945594 Msa0032020:CDS 35.0%
TACTCTTTACATTTCCTCTC+TGG - chr1_1:58945693-58945712 None:intergenic 35.0%
! GCTGACTATACTTTTCACAT+TGG + chr1_1:58945723-58945742 Msa0032020:three_prime_UTR 35.0%
TTTCTTCCCATTTGCGATAT+TGG + chr1_1:58945824-58945843 Msa0032020:three_prime_UTR 35.0%
CATGATCCAATATCGCAAAT+GGG - chr1_1:58945833-58945852 None:intergenic 35.0%
TCATGATCCAATATCGCAAA+TGG - chr1_1:58945834-58945853 None:intergenic 35.0%
AAGTGAAAATGAAGAGGTTG+TGG + chr1_1:58945895-58945914 Msa0032020:three_prime_UTR 35.0%
TGTATCTACATCTACATCGA+TGG + chr1_1:58945975-58945994 Msa0032020:three_prime_UTR 35.0%
TCTAGAAAAGGACATGAAGG+CGG - chr1_1:58941607-58941626 None:intergenic 40.0%
GGATCTAGAAAAGGACATGA+AGG - chr1_1:58941610-58941629 None:intergenic 40.0%
GGAGAGATTGGATCTAGAAA+AGG - chr1_1:58941619-58941638 None:intergenic 40.0%
AGAAGAAGAGTAGGAGAGAT+TGG - chr1_1:58941631-58941650 None:intergenic 40.0%
! AGTGGAAGTTTCGGTGATTT+TGG - chr1_1:58941698-58941717 None:intergenic 40.0%
TGCAGGACTGTGTTTGTATT+TGG - chr1_1:58941858-58941877 None:intergenic 40.0%
!! GATTTGATCGGCTTGAATCT+CGG - chr1_1:58941990-58942009 None:intergenic 40.0%
TGGAGTCTTCAAAACGAACA+AGG + chr1_1:58942121-58942140 Msa0032020:CDS 40.0%
ACTTACCGTATTTGGAAACG+TGG + chr1_1:58942358-58942377 Msa0032020:CDS 40.0%
AGTCATATCAGCACGAAGAT+TGG - chr1_1:58942386-58942405 None:intergenic 40.0%
! ATGACTTTAGCTGGTTTCGA+TGG + chr1_1:58942400-58942419 Msa0032020:CDS 40.0%
! TGACTTTAGCTGGTTTCGAT+GGG + chr1_1:58942401-58942420 Msa0032020:CDS 40.0%
!!! GAGTTTTTTGTTTCTCGGTG+AGG + chr1_1:58942447-58942466 Msa0032020:CDS 40.0%
TCAGACGAATATGTATCGTC+CGG + chr1_1:58942618-58942637 Msa0032020:CDS 40.0%
! AGCTTGTTCCGAATCTGAAT+TGG + chr1_1:58942662-58942681 Msa0032020:CDS 40.0%
TTGTTCCGAATCTGAATTGG+AGG + chr1_1:58942665-58942684 Msa0032020:CDS 40.0%
! GACGAAGAGGTTTTTGCAAA+TGG + chr1_1:58942793-58942812 Msa0032020:CDS 40.0%
! AGAGGTTTTTGCAAATGGAG+AGG + chr1_1:58942798-58942817 Msa0032020:CDS 40.0%
TGGTGTGGTTAAAGAGAAGA+AGG + chr1_1:58942975-58942994 Msa0032020:CDS 40.0%
GGTGTGGTTAAAGAGAAGAA+GGG + chr1_1:58942976-58942995 Msa0032020:CDS 40.0%
TGGTTAAAGAGAAGAAGGGT+TGG + chr1_1:58942980-58942999 Msa0032020:CDS 40.0%
!! AAAGAGAAGAAGGGTTGGTT+TGG + chr1_1:58942985-58943004 Msa0032020:CDS 40.0%
AGAAGCTCATCTGTCTTCAA+AGG - chr1_1:58943219-58943238 None:intergenic 40.0%
CAAACAAGGTGAAGGCTATT+CGG + chr1_1:58943259-58943278 Msa0032020:CDS 40.0%
CTGACAACTAAACTTCCTCA+AGG + chr1_1:58943297-58943316 Msa0032020:CDS 40.0%
TTAACAGGAAAGGTTCCTTG+AGG - chr1_1:58943315-58943334 None:intergenic 40.0%
TCAAGGAACCTTTCCTGTTA+AGG + chr1_1:58943314-58943333 Msa0032020:CDS 40.0%
CACTCAGCATTCATCTGTTA+TGG - chr1_1:58943526-58943545 None:intergenic 40.0%
ATTAGTAGTTAAGAGTGGGG+GGG - chr1_1:58943650-58943669 None:intergenic 40.0%
!! CCAGAATAATGGACATTTGG+AGG - chr1_1:58943736-58943755 None:intergenic 40.0%
CCTCCAAATGTCCATTATTC+TGG + chr1_1:58943733-58943752 Msa0032020:intron 40.0%
AGAGGAGGAGCCTTAATTTA+GGG - chr1_1:58944146-58944165 None:intergenic 40.0%
TAGAGGAGGAGCCTTAATTT+AGG - chr1_1:58944147-58944166 None:intergenic 40.0%
GACATACATGAATGTAGAGG+AGG - chr1_1:58944161-58944180 None:intergenic 40.0%
TAAAGAACTTTCAAGGAGGG+GGG - chr1_1:58944355-58944374 None:intergenic 40.0%
AATAACGCTTGGCCAACATA+TGG - chr1_1:58944792-58944811 None:intergenic 40.0%
GTGCTAGAGTTCTCATATGT+AGG - chr1_1:58944860-58944879 None:intergenic 40.0%
! ATTGATGTTTAGAACGCCAC+CGG - chr1_1:58944898-58944917 None:intergenic 40.0%
!! AAGGATAAGACAGCGGATTT+TGG - chr1_1:58944979-58944998 None:intergenic 40.0%
! ATGGTACGGCATTATTTCTC+AGG + chr1_1:58945194-58945213 Msa0032020:intron 40.0%
ACCCTTATAGTAGGGACTAT+AGG - chr1_1:58945257-58945276 None:intergenic 40.0%
ATTCCTTGGATTTAGCATCC+TGG - chr1_1:58945358-58945377 None:intergenic 40.0%
GCTAAATCCAAGGAATCAGA+AGG + chr1_1:58945362-58945381 Msa0032020:CDS 40.0%
TCCTTCAGACTATAAATGGG+TGG + chr1_1:58945496-58945515 Msa0032020:CDS 40.0%
TCCACCCATTTATAGTCTGA+AGG - chr1_1:58945500-58945519 None:intergenic 40.0%
ACTGTTGCTAAAGGAAGAGA+TGG + chr1_1:58945584-58945603 Msa0032020:CDS 40.0%
! TTTGATAATCGTTGCCAGAG+AGG + chr1_1:58945676-58945695 Msa0032020:three_prime_UTR 40.0%
! TGGTCTTGCCAAGAATTTAC+TGG + chr1_1:58945747-58945766 Msa0032020:three_prime_UTR 40.0%
CAAGTAGCCAACTAATCGAA+AGG - chr1_1:58945921-58945940 None:intergenic 40.0%
! CTTTCGATTAGTTGGCTACT+TGG + chr1_1:58945919-58945938 Msa0032020:three_prime_UTR 40.0%
!! GATGACGGAGGAGATTTGAT+CGG - chr1_1:58942002-58942021 None:intergenic 45.0%
GTCTTCAAAACGAACAAGGC+TGG + chr1_1:58942125-58942144 Msa0032020:CDS 45.0%
CTGGAGTTCTCTTCAAGAAG+CGG + chr1_1:58942144-58942163 Msa0032020:CDS 45.0%
AACCTCTTGCTTGGTCCAAA+TGG + chr1_1:58942215-58942234 Msa0032020:CDS 45.0%
AGGAGATTGCCACGTGTTAT+AGG + chr1_1:58942241-58942260 Msa0032020:CDS 45.0%
AAAATCACGAATCCGCGAAG+CGG - chr1_1:58942269-58942288 None:intergenic 45.0%
TGGCACCACGTTTCCAAATA+CGG - chr1_1:58942366-58942385 None:intergenic 45.0%
! CGTGCTGATATGACTTTAGC+TGG + chr1_1:58942391-58942410 Msa0032020:CDS 45.0%
TGGGTTTCGAATTCAGCGTT+CGG + chr1_1:58942420-58942439 Msa0032020:CDS 45.0%
AGAGCAATCAAAGAACCACG+CGG - chr1_1:58942505-58942524 None:intergenic 45.0%
TGCTCTTGCTCATAAGGAGA+AGG + chr1_1:58942519-58942538 Msa0032020:CDS 45.0%
TTCGCAATCTCACTTTCGGT+CGG - chr1_1:58942580-58942599 None:intergenic 45.0%
CAGACGAATATGTATCGTCC+GGG + chr1_1:58942619-58942638 Msa0032020:CDS 45.0%
AGACGAATATGTATCGTCCG+GGG + chr1_1:58942620-58942639 Msa0032020:CDS 45.0%
TGACGCCTCCAATTCAGATT+CGG - chr1_1:58942673-58942692 None:intergenic 45.0%
TGGTGAGTGTGAAATCGAGA+CGG + chr1_1:58942752-58942771 Msa0032020:CDS 45.0%
! TCTTCGTCATTCAAAGCACC+AGG - chr1_1:58942781-58942800 None:intergenic 45.0%
! TGGTGCTTTGAATGACGAAG+AGG + chr1_1:58942780-58942799 Msa0032020:CDS 45.0%
!! TGATGATGTGTTGACTGCTG+AGG + chr1_1:58942825-58942844 Msa0032020:CDS 45.0%
! GGAGAGAGTGCAATTGGATT+CGG + chr1_1:58942846-58942865 Msa0032020:CDS 45.0%
TGCAATTGGATTCGGCTTTG+AGG + chr1_1:58942854-58942873 Msa0032020:CDS 45.0%
!! ATTGGATTCGGCTTTGAGGA+TGG + chr1_1:58942858-58942877 Msa0032020:CDS 45.0%
!! TTGGATTCGGCTTTGAGGAT+GGG + chr1_1:58942859-58942878 Msa0032020:CDS 45.0%
!! AGAAGAAGGGTTGGTTTGGA+TGG + chr1_1:58942989-58943008 Msa0032020:CDS 45.0%
TGATCGCTCAATCTCTGGTT+TGG - chr1_1:58943024-58943043 None:intergenic 45.0%
TTTGCTGATCGCTCAATCTC+TGG - chr1_1:58943029-58943048 None:intergenic 45.0%
TGATCCTCCTTCGGAAAATC+AGG - chr1_1:58943060-58943079 None:intergenic 45.0%
! GATTTTCCGAAGGAGGATCA+CGG + chr1_1:58943060-58943079 Msa0032020:CDS 45.0%
! ATTTTCCGAAGGAGGATCAC+GGG + chr1_1:58943061-58943080 Msa0032020:CDS 45.0%
AGTGAGAGTGAGTTCAAACG+AGG + chr1_1:58943159-58943178 Msa0032020:CDS 45.0%
TCTTGTGTCAACCACAAGAC+AGG - chr1_1:58943192-58943211 None:intergenic 45.0%
GTGCTAATTGAGCACTTGCA+TGG + chr1_1:58944616-58944635 Msa0032020:intron 45.0%
GCCTATACCCAGTACTCTTT+AGG + chr1_1:58944677-58944696 Msa0032020:intron 45.0%
!! GCCTAAAGAGTACTGGGTAT+AGG - chr1_1:58944681-58944700 None:intergenic 45.0%
!! GTGTCAGCCTAAAGAGTACT+GGG - chr1_1:58944687-58944706 None:intergenic 45.0%
! TGTGTCAGCCTAAAGAGTAC+TGG - chr1_1:58944688-58944707 None:intergenic 45.0%
GCAAAGCGACTTCCATATGT+TGG + chr1_1:58944777-58944796 Msa0032020:intron 45.0%
! TTGATGTTTAGAACGCCACC+GGG - chr1_1:58944897-58944916 None:intergenic 45.0%
! CATTATTTCTCAGGCCTCTC+TGG + chr1_1:58945203-58945222 Msa0032020:intron 45.0%
CAGCAATAGCATAACCAGAG+AGG - chr1_1:58945220-58945239 None:intergenic 45.0%
TGGTTATGCTATTGCTGTGC+AGG + chr1_1:58945223-58945242 Msa0032020:intron 45.0%
ATTTGAGGAGCTTCAGACAC+CGG + chr1_1:58945295-58945314 Msa0032020:CDS 45.0%
AGTGGAGTTGAAAACTCCTC+CGG - chr1_1:58945317-58945336 None:intergenic 45.0%
CTTCCAGGATGCTAAATCCA+AGG + chr1_1:58945352-58945371 Msa0032020:CDS 45.0%
ATCCAAGGAATCAGAAGGGT+CGG + chr1_1:58945367-58945386 Msa0032020:CDS 45.0%
TCCTGGGTTTCATGGATGAA+AGG + chr1_1:58945392-58945411 Msa0032020:CDS 45.0%
TCCTTTCATCCATGAAACCC+AGG - chr1_1:58945396-58945415 None:intergenic 45.0%
TCATGGATGAAAGGAAGTCG+TGG + chr1_1:58945401-58945420 Msa0032020:CDS 45.0%
AATGGGTGGATGCAAATGAG+AGG + chr1_1:58945510-58945529 Msa0032020:CDS 45.0%
AACGCCGTATGAAGGCAAAA+AGG + chr1_1:58945534-58945553 Msa0032020:CDS 45.0%
ACGCCGTATGAAGGCAAAAA+GGG + chr1_1:58945535-58945554 Msa0032020:CDS 45.0%
! TGGCCCTTTTTGCCTTCATA+CGG - chr1_1:58945541-58945560 None:intergenic 45.0%
CATCAGGGGAGTGATGATTT+CGG + chr1_1:58945611-58945630 Msa0032020:CDS 45.0%
GTTGTGGCCTTTCGATTAGT+TGG + chr1_1:58945911-58945930 Msa0032020:three_prime_UTR 45.0%
TGATCTCCCATTTCTGTGAG+TGG + chr1_1:58946002-58946021 Msa0032020:three_prime_UTR 45.0%
GAGACACCACTCACAGAAAT+GGG - chr1_1:58946011-58946030 None:intergenic 45.0%
CATTTCTGTGAGTGGTGTCT+CGG + chr1_1:58946010-58946029 Msa0032020:three_prime_UTR 45.0%
GAAAAGGACATGAAGGCGGA+GGG - chr1_1:58941603-58941622 None:intergenic 50.0%
AGAAAAGGACATGAAGGCGG+AGG - chr1_1:58941604-58941623 None:intergenic 50.0%
! TTTAAGACAGCCACGTGTGC+AGG - chr1_1:58941875-58941894 None:intergenic 50.0%
AATCTCGGCGGAGAGAGATT+CGG - chr1_1:58941975-58941994 None:intergenic 50.0%
!! TTGATCGGCTTGAATCTCGG+CGG - chr1_1:58941987-58942006 None:intergenic 50.0%
!! ATGGAGAGGTGTTTCTCGAC+CGG - chr1_1:58942041-58942060 None:intergenic 50.0%
GATTGGATCCCTTAGACGGA+CGG - chr1_1:58942068-58942087 None:intergenic 50.0%
ATAAGAATCTCGGCGGCGAT+TGG - chr1_1:58942085-58942104 None:intergenic 50.0%
CACCATTTGGACCAAGCAAG+AGG - chr1_1:58942220-58942239 None:intergenic 50.0%
TTGCTTGGTCCAAATGGTGC+AGG + chr1_1:58942221-58942240 Msa0032020:CDS 50.0%
TGGCAATCTCCTGCACCATT+TGG - chr1_1:58942233-58942252 None:intergenic 50.0%
GAAGCGGAACCTATAACACG+TGG - chr1_1:58942253-58942272 None:intergenic 50.0%
GTGTTATAGGTTCCGCTTCG+CGG + chr1_1:58942254-58942273 Msa0032020:CDS 50.0%
TCTCGGTGAGGGTTATGCTT+CGG + chr1_1:58942459-58942478 Msa0032020:CDS 50.0%
TCCGGGGATTGATGTTACTC+AGG + chr1_1:58942636-58942655 Msa0032020:CDS 50.0%
GCCTGAGTAACATCAATCCC+CGG - chr1_1:58942640-58942659 None:intergenic 50.0%
GGGGATTGATGTTACTCAGG+CGG + chr1_1:58942639-58942658 Msa0032020:CDS 50.0%
!! GAATCTGAATTGGAGGCGTC+AGG + chr1_1:58942672-58942691 Msa0032020:CDS 50.0%
AGGAGAAGACGGAGGTTGTT+GGG + chr1_1:58942692-58942711 Msa0032020:CDS 50.0%
GGTGAGTGTGAAATCGAGAC+GGG + chr1_1:58942753-58942772 Msa0032020:CDS 50.0%
! TGCTGAGGAGAGAGTGCAAT+TGG + chr1_1:58942840-58942859 Msa0032020:CDS 50.0%
!! TGGATTCGGCTTTGAGGATG+GGG + chr1_1:58942860-58942879 Msa0032020:CDS 50.0%
GGATGGTGTTTGTCAAGACG+AGG + chr1_1:58942888-58942907 Msa0032020:CDS 50.0%
GTTTGTCAAGACGAGGAACC+TGG + chr1_1:58942895-58942914 Msa0032020:CDS 50.0%
! GCTACAGCCTGATTTTCCGA+AGG + chr1_1:58943050-58943069 Msa0032020:CDS 50.0%
! ACAGCCTGATTTTCCGAAGG+AGG + chr1_1:58943053-58943072 Msa0032020:CDS 50.0%
! TTTTCCGAAGGAGGATCACG+GGG + chr1_1:58943062-58943081 Msa0032020:CDS 50.0%
ATTTCCCCGTGATCCTCCTT+CGG - chr1_1:58943069-58943088 None:intergenic 50.0%
GAGGTGTAAGACCTGTCTTG+TGG + chr1_1:58943178-58943197 Msa0032020:CDS 50.0%
AGTTAAGAGTGGGGGGGATA+AGG - chr1_1:58943644-58943663 None:intergenic 50.0%
!! AGAGTACTGGGTATAGGCCA+GGG - chr1_1:58944675-58944694 None:intergenic 50.0%
!! AAGAGTACTGGGTATAGGCC+AGG - chr1_1:58944676-58944695 None:intergenic 50.0%
GCACTCCAAGAGTAAAGTCC+CGG + chr1_1:58944876-58944895 Msa0032020:intron 50.0%
TAGCATCCTGGAAGCTGACA+GGG - chr1_1:58945346-58945365 None:intergenic 50.0%
TTAGCATCCTGGAAGCTGAC+AGG - chr1_1:58945347-58945366 None:intergenic 50.0%
TGAGAGGAAACGCCGTATGA+AGG + chr1_1:58945526-58945545 Msa0032020:CDS 50.0%
AGGAAGAGATGGAGTGCATC+AGG + chr1_1:58945595-58945614 Msa0032020:CDS 50.0%
GGAAGAGATGGAGTGCATCA+GGG + chr1_1:58945596-58945615 Msa0032020:CDS 50.0%
GAAGAGATGGAGTGCATCAG+GGG + chr1_1:58945597-58945616 Msa0032020:CDS 50.0%
CGAGACACCACTCACAGAAA+TGG - chr1_1:58946012-58946031 None:intergenic 50.0%
AGGGACAGTTGGGACAGAAC+TGG - chr1_1:58941584-58941603 None:intergenic 55.0%
ATGAAGGCGGAGGGACAGTT+GGG - chr1_1:58941594-58941613 None:intergenic 55.0%
CAAACACAGTCCTGCACACG+TGG + chr1_1:58941862-58941881 Msa0032020:CDS 55.0%
!! TGGGGATGGTGGAGATGAGA+CGG - chr1_1:58941919-58941938 None:intergenic 55.0%
TTTCTCGACCGGGAACATCG+CGG - chr1_1:58942030-58942049 None:intergenic 55.0%
!! TGGAGAGGTGTTTCTCGACC+GGG - chr1_1:58942040-58942059 None:intergenic 55.0%
TCCATCTCACCGTCCGTCTA+AGG + chr1_1:58942056-58942075 Msa0032020:CDS 55.0%
CCATCTCACCGTCCGTCTAA+GGG + chr1_1:58942057-58942076 Msa0032020:CDS 55.0%
CGGCGATTGGATCCCTTAGA+CGG - chr1_1:58942072-58942091 None:intergenic 55.0%
GGCGGACATAAGAATCTCGG+CGG - chr1_1:58942092-58942111 None:intergenic 55.0%
GCCGAGATTCTTATGTCCGC+CGG + chr1_1:58942091-58942110 Msa0032020:CDS 55.0%
GCCGGCGGACATAAGAATCT+CGG - chr1_1:58942095-58942114 None:intergenic 55.0%
TTGAAGACTCCAATCGGCGC+CGG - chr1_1:58942113-58942132 None:intergenic 55.0%
GAGGGTTATGCTTCGGAGGA+TGG + chr1_1:58942466-58942485 Msa0032020:CDS 55.0%
!! ACGAATGCTTTGGAAGGGGC+TGG + chr1_1:58942547-58942566 Msa0032020:CDS 55.0%
!! TTGGAGGCGTCAGGAGAAGA+CGG + chr1_1:58942681-58942700 Msa0032020:CDS 55.0%
CAGGAGAAGACGGAGGTTGT+TGG + chr1_1:58942691-58942710 Msa0032020:CDS 55.0%
GGAGAAGACGGAGGTTGTTG+GGG + chr1_1:58942693-58942712 Msa0032020:CDS 55.0%
AGACGGAGGTTGTTGGGGAT+TGG + chr1_1:58942698-58942717 Msa0032020:CDS 55.0%
GGAGGTTGTTGGGGATTGGA+AGG + chr1_1:58942702-58942721 Msa0032020:CDS 55.0%
TGTTGGGGATTGGAAGGCGA+AGG + chr1_1:58942708-58942727 Msa0032020:CDS 55.0%
! GTGAAATCGAGACGGGTTCC+TGG + chr1_1:58942760-58942779 Msa0032020:CDS 55.0%
!! GGCTTTGAGGATGGGGAACT+CGG + chr1_1:58942867-58942886 Msa0032020:CDS 55.0%
TTGAGGATGGGGAACTCGGA+TGG + chr1_1:58942871-58942890 Msa0032020:CDS 55.0%
GCAGCAGGAGGAGGATTTGA+TGG + chr1_1:58942919-58942938 Msa0032020:CDS 55.0%
! GGAGGAGGATTTGATGGTCG+CGG + chr1_1:58942925-58942944 Msa0032020:CDS 55.0%
TGAGAAGCTTTCCGAGACCC+TGG + chr1_1:58944655-58944674 Msa0032020:intron 55.0%
CTCCAAGAGTAAAGTCCCGG+TGG + chr1_1:58944879-58944898 Msa0032020:intron 55.0%
AAGCTGACAGGGCTAGAGAG+TGG - chr1_1:58945335-58945354 None:intergenic 55.0%
TGCCGACCCTTCTGATTCCT+TGG - chr1_1:58945372-58945391 None:intergenic 55.0%
AATCAGAAGGGTCGGCATCC+TGG + chr1_1:58945375-58945394 Msa0032020:CDS 55.0%
ATCAGAAGGGTCGGCATCCT+GGG + chr1_1:58945376-58945395 Msa0032020:CDS 55.0%
CATGAAGGCGGAGGGACAGT+TGG - chr1_1:58941595-58941614 None:intergenic 60.0%
!! GGATGGTGGAGATGAGACGG+CGG - chr1_1:58941916-58941935 None:intergenic 60.0%
TTTGGGGAGAGTGGGGATGG+TGG - chr1_1:58941930-58941949 None:intergenic 60.0%
ATCCCCACTCTCCCCAAACC+CGG + chr1_1:58941932-58941951 Msa0032020:CDS 60.0%
TGGTGACTTCGCCGGGTTTG+GGG - chr1_1:58941946-58941965 None:intergenic 60.0%
GTGGTGACTTCGCCGGGTTT+GGG - chr1_1:58941947-58941966 None:intergenic 60.0%
GGAGAGAGATTCGGACTCGG+TGG - chr1_1:58941966-58941985 None:intergenic 60.0%
GGCGGAGAGAGATTCGGACT+CGG - chr1_1:58941969-58941988 None:intergenic 60.0%
AACATCGCGGCGGTCGATGA+CGG - chr1_1:58942017-58942036 None:intergenic 60.0%
AGACGGACGGTGAGATGGAG+AGG - chr1_1:58942055-58942074 None:intergenic 60.0%
CCCTTAGACGGACGGTGAGA+TGG - chr1_1:58942060-58942079 None:intergenic 60.0%
CGGTGAGGGTTATGCTTCGG+AGG + chr1_1:58942462-58942481 Msa0032020:CDS 60.0%
GGTAATGTGACGCTACCGCG+TGG + chr1_1:58942487-58942506 Msa0032020:CDS 60.0%
AATCCTCCTCCTGCTGCTCC+AGG - chr1_1:58942916-58942935 None:intergenic 60.0%
CAAGGAGGGGGGAGAATGTC+TGG - chr1_1:58944344-58944363 None:intergenic 60.0%
CTGGGTATAGGCCAGGGTCT+CGG - chr1_1:58944669-58944688 None:intergenic 60.0%
CGCCACCGGGACTTTACTCT+TGG - chr1_1:58944884-58944903 None:intergenic 60.0%
TGAGGAGCTTCAGACACCGG+AGG + chr1_1:58945298-58945317 Msa0032020:CDS 60.0%
CTCTAGCCCTGTCAGCTTCC+AGG + chr1_1:58945337-58945356 Msa0032020:CDS 60.0%
GGTCGGCATCCTGGGTTTCA+TGG + chr1_1:58945384-58945403 Msa0032020:CDS 60.0%
GGTGGAGATGAGACGGCGGA+GGG - chr1_1:58941912-58941931 None:intergenic 65.0%
TGGTGGAGATGAGACGGCGG+AGG - chr1_1:58941913-58941932 None:intergenic 65.0%
GGGTTTGGGGAGAGTGGGGA+TGG - chr1_1:58941933-58941952 None:intergenic 65.0%
TCGCCGGGTTTGGGGAGAGT+GGG - chr1_1:58941938-58941957 None:intergenic 65.0%
TTCGCCGGGTTTGGGGAGAG+TGG - chr1_1:58941939-58941958 None:intergenic 65.0%
GGTGGTGACTTCGCCGGGTT+TGG - chr1_1:58941948-58941967 None:intergenic 65.0%
!! GACTCGGTGGTGACTTCGCC+GGG - chr1_1:58941953-58941972 None:intergenic 65.0%
!! GGACTCGGTGGTGACTTCGC+CGG - chr1_1:58941954-58941973 None:intergenic 65.0%
ATCGACCGCCGCGATGTTCC+CGG + chr1_1:58942019-58942038 Msa0032020:CDS 65.0%
!! TTATGTCCGCCGGCGCCGAT+TGG + chr1_1:58942101-58942120 Msa0032020:CDS 65.0%
! AAGACTCCAATCGGCGCCGG+CGG - chr1_1:58942110-58942129 None:intergenic 65.0%
! GAGGCGTCAGGAGAAGACGG+AGG + chr1_1:58942684-58942703 Msa0032020:CDS 65.0%
GACGAGGAACCTGGAGCAGC+AGG + chr1_1:58942904-58942923 Msa0032020:CDS 65.0%
GAGGAACCTGGAGCAGCAGG+AGG + chr1_1:58942907-58942926 Msa0032020:CDS 65.0%
GAACCTGGAGCAGCAGGAGG+AGG + chr1_1:58942910-58942929 Msa0032020:CDS 65.0%
GGAGATGAGACGGCGGAGGG+AGG - chr1_1:58941909-58941928 None:intergenic 70.0%
CGCCGGGTTTGGGGAGAGTG+GGG - chr1_1:58941937-58941956 None:intergenic 70.0%
! ATCGCGGCGGTCGATGACGG+AGG - chr1_1:58942014-58942033 None:intergenic 70.0%
CTCGACCGGGAACATCGCGG+CGG - chr1_1:58942027-58942046 None:intergenic 70.0%
TGAGACGGCGGAGGGAGGCG+TGG - chr1_1:58941904-58941923 None:intergenic 75.0%
!! GGCGGAGGGAGGCGTGGTCG+CGG - chr1_1:58941898-58941917 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 58941563 58946163 58941563 ID=Msa0032020;Name=Msa0032020
chr1_1 mRNA 58941563 58946163 58941563 ID=Msa0032020-mRNA-1;Parent=Msa0032020;Name=Msa0032020-mRNA-1;_AED=0.02;_eAED=0.02;_QI=279|1|1|1|1|1|2|514|632
chr1_1 exon 58941563 58943335 58941563 ID=Msa0032020-mRNA-1:exon:18057;Parent=Msa0032020-mRNA-1
chr1_1 exon 58945245 58946163 58945245 ID=Msa0032020-mRNA-1:exon:18058;Parent=Msa0032020-mRNA-1
chr1_1 five_prime_UTR 58941563 58941841 58941563 ID=Msa0032020-mRNA-1:five_prime_utr;Parent=Msa0032020-mRNA-1
chr1_1 CDS 58941842 58943335 58941842 ID=Msa0032020-mRNA-1:cds;Parent=Msa0032020-mRNA-1
chr1_1 CDS 58945245 58945649 58945245 ID=Msa0032020-mRNA-1:cds;Parent=Msa0032020-mRNA-1
chr1_1 three_prime_UTR 58945650 58946163 58945650 ID=Msa0032020-mRNA-1:three_prime_utr;Parent=Msa0032020-mRNA-1
Gene Sequence

>Msa0032020

ATGGAAGATATATCCAAATACAAACACAGTCCTGCACACGTGGCTGTCTTAAACCGCGACCACGCCTCCCTCCGCCGTCTCATCTCCACCATCCCCACTCTCCCCAAACCCGGCGAAGTCACCACCGAGTCCGAATCTCTCTCCGCCGAGATTCAAGCCGATCAAATCTCCTCCGTCATCGACCGCCGCGATGTTCCCGGTCGAGAAACACCTCTCCATCTCACCGTCCGTCTAAGGGATCCAATCGCCGCCGAGATTCTTATGTCCGCCGGCGCCGATTGGAGTCTTCAAAACGAACAAGGCTGGAGTTCTCTTCAAGAAGCGGTTTGCAATCGAGAAGAATCAATCGCGCTTGTTATCGCGCGATATTATCAACCTCTTGCTTGGTCCAAATGGTGCAGGAGATTGCCACGTGTTATAGGTTCCGCTTCGCGGATTCGTGATTTTTATATGGAGATTTCTTTCCATTTTGAGAGTTCTGTTATTCCTTTTATAGGTAGAATTGCTCCTTCTGATACTTACCGTATTTGGAAACGTGGTGCCAATCTTCGTGCTGATATGACTTTAGCTGGTTTCGATGGGTTTCGAATTCAGCGTTCGGATCAGAGTTTTTTGTTTCTCGGTGAGGGTTATGCTTCGGAGGATGGTAATGTGACGCTACCGCGTGGTTCTTTGATTGCTCTTGCTCATAAGGAGAAGGAAATTACGAATGCTTTGGAAGGGGCTGGTACACAGCCGACCGAAAGTGAGATTGCGAATGAAGTTTCGATGATGTTTCAGACGAATATGTATCGTCCGGGGATTGATGTTACTCAGGCGGAGCTTGTTCCGAATCTGAATTGGAGGCGTCAGGAGAAGACGGAGGTTGTTGGGGATTGGAAGGCGAAGGTTTATGATATGCTCAATGTTATGGTGAGTGTGAAATCGAGACGGGTTCCTGGTGCTTTGAATGACGAAGAGGTTTTTGCAAATGGAGAGGATTATGATGATGTGTTGACTGCTGAGGAGAGAGTGCAATTGGATTCGGCTTTGAGGATGGGGAACTCGGATGGTGTTTGTCAAGACGAGGAACCTGGAGCAGCAGGAGGAGGATTTGATGGTCGCGGAATTGTGTATGATAATTGTGAAGTTAATGGTGTGGTTAAAGAGAAGAAGGGTTGGTTTGGATGGAATAAGAATCCAAACCAGAGATTGAGCGATCAGCAAAAGCTACAGCCTGATTTTCCGAAGGAGGATCACGGGGAAATGAAATCAAAGAAAGGAAAGGATCAAAACTTGAAAAAGAAAAAGAAGAAAGGAGCGAGTAACGAGTCTAAAAGTGAGAGTGAGTTCAAACGAGGTGTAAGACCTGTCTTGTGGTTGACACAAGACTTTCCTTTGAAGACAGATGAGCTTCTGCCCTTACTTGATATCTTAGCAAACAAGGTGAAGGCTATTCGGAGACTCAGAGAACTTCTGACAACTAAACTTCCTCAAGGAACCTTTCCTGTTAAGGTAGCTATTCCTATAGTCCCTACTATAAGGGTAATTGTTACTTTTACAAAATTTGAGGAGCTTCAGACACCGGAGGAGTTTTCAACTCCACTCTCTAGCCCTGTCAGCTTCCAGGATGCTAAATCCAAGGAATCAGAAGGGTCGGCATCCTGGGTTTCATGGATGAAAGGAAGTCGTGGTATGCTATCTAGTGACTCTGATAGTCATATTCACAGTCACAGATATAAGGATGAAGTAGACCCTTTCATTATTCCTTCAGACTATAAATGGGTGGATGCAAATGAGAGGAAACGCCGTATGAAGGCAAAAAGGGCCAAAATTAAGAAAAATAAGAAACAGACTGTTGCTAAAGGAAGAGATGGAGTGCATCAGGGGAGTGATGATTTCGGAGAATTATACCACTAG
Protein sequence

>Msa0032020

MEDISKYKHSPAHVAVLNRDHASLRRLISTIPTLPKPGEVTTESESLSAEIQADQISSVIDRRDVPGRETPLHLTVRLRDPIAAEILMSAGADWSLQNEQGWSSLQEAVCNREESIALVIARYYQPLAWSKWCRRLPRVIGSASRIRDFYMEISFHFESSVIPFIGRIAPSDTYRIWKRGANLRADMTLAGFDGFRIQRSDQSFLFLGEGYASEDGNVTLPRGSLIALAHKEKEITNALEGAGTQPTESEIANEVSMMFQTNMYRPGIDVTQAELVPNLNWRRQEKTEVVGDWKAKVYDMLNVMVSVKSRRVPGALNDEEVFANGEDYDDVLTAEERVQLDSALRMGNSDGVCQDEEPGAAGGGFDGRGIVYDNCEVNGVVKEKKGWFGWNKNPNQRLSDQQKLQPDFPKEDHGEMKSKKGKDQNLKKKKKKGASNESKSESEFKRGVRPVLWLTQDFPLKTDELLPLLDILANKVKAIRRLRELLTTKLPQGTFPVKVAIPIVPTIRVIVTFTKFEELQTPEEFSTPLSSPVSFQDAKSKESEGSASWVSWMKGSRGMLSSDSDSHIHSHRYKDEVDPFIIPSDYKWVDANERKRRMKAKRAKIKKNKKQTVAKGRDGVHQGSDDFGELYH*