AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0897660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0897660 MtrunA17_Chr7g0236841 72.459 305 17 3 1 238 134 438 1.25e-148 421
Msa0897660 MtrunA17_Chr6g0483491 93.839 211 13 0 1 211 134 344 7.94e-142 404
Msa0897660 MtrunA17_Chr5g0429221 67.857 196 62 1 1 195 129 324 1.65e-85 260
Msa0897660 MtrunA17_Chr1g0155201 50.000 210 89 4 1 207 16 212 8.52e-56 181
Msa0897660 MtrunA17_Chr2g0307471 42.009 219 124 1 1 216 218 436 1.70e-51 175
Msa0897660 MtrunA17_Chr4g0062301 40.639 219 127 2 1 216 225 443 1.81e-43 154
Msa0897660 MtrunA17_Chr2g0310581 39.655 232 130 4 1 222 175 406 2.51e-42 150
Msa0897660 MtrunA17_Chr4g0062321 41.799 189 107 2 1 186 45 233 3.35e-39 135
Msa0897660 MtrunA17_Chr1g0193491 39.720 214 124 4 1 211 243 454 1.06e-36 136
Msa0897660 MtrunA17_Chr2g0300291 36.364 198 123 1 1 195 267 464 8.96e-36 134
Msa0897660 MtrunA17_Chr3g0098121 35.859 198 124 1 1 195 277 474 1.06e-35 134
Msa0897660 MtrunA17_Chr3g0114081 35.371 229 129 2 1 210 145 373 1.90e-35 132
Msa0897660 MtrunA17_Chr5g0442191 37.209 215 128 5 1 211 207 418 1.30e-34 130
Msa0897660 MtrunA17_Chr4g0034411 37.438 203 119 6 1 197 202 402 1.49e-34 130
Msa0897660 MtrunA17_Chr3g0095031 38.605 215 125 5 1 211 216 427 1.96e-34 129
Msa0897660 MtrunA17_Chr2g0330401 40.102 197 115 3 1 195 223 418 7.40e-34 127
Msa0897660 MtrunA17_Chr7g0270131 38.579 197 116 4 1 194 359 553 8.03e-34 128
Msa0897660 MtrunA17_Chr5g0443991 35.149 202 126 3 1 197 202 403 9.73e-34 128
Msa0897660 MtrunA17_Chr7g0271121 37.383 214 129 4 1 211 234 445 1.63e-33 127
Msa0897660 MtrunA17_Chr3g0107851 35.965 228 129 5 1 216 245 467 1.91e-33 126
Msa0897660 MtrunA17_Chr4g0076491 35.047 214 121 2 1 197 417 629 5.27e-32 123
Msa0897660 MtrunA17_Chr6g0449741 34.884 215 118 4 1 197 379 589 1.93e-30 118
Msa0897660 MtrunA17_Chr4g0040761 33.498 203 129 3 1 199 143 343 6.44e-30 117
Msa0897660 MtrunA17_Chr7g0247191 34.123 211 135 3 1 210 272 479 9.09e-30 115
Msa0897660 MtrunA17_Chr7g0247221 33.649 211 136 3 1 210 265 472 1.08e-29 115
Msa0897660 MtrunA17_Chr7g0247181 33.649 211 136 3 1 210 262 469 1.23e-29 115
Msa0897660 MtrunA17_Chr6g0449911 33.613 238 145 6 1 233 291 520 7.71e-29 114
Msa0897660 MtrunA17_Chr2g0293631 34.259 216 133 5 1 211 622 833 1.09e-28 114
Msa0897660 MtrunA17_Chr1g0157691 32.995 197 130 2 1 197 283 477 2.09e-28 112
Msa0897660 MtrunA17_Chr5g0409981 36.500 200 121 4 1 195 232 430 2.25e-28 112
Msa0897660 MtrunA17_Chr1g0155691 70.370 81 24 0 115 195 1 81 2.25e-28 106
Msa0897660 MtrunA17_Chr3g0121351 34.615 208 124 3 1 197 278 484 3.14e-28 112
Msa0897660 MtrunA17_Chr1g0200181 33.503 197 129 2 1 197 281 475 3.58e-28 112
Msa0897660 MtrunA17_Chr8g0347151 31.858 226 141 4 1 213 333 558 1.46e-27 110
Msa0897660 MtrunA17_Chr1g0176041 34.615 208 124 4 1 197 286 492 3.46e-27 109
Msa0897660 MtrunA17_Chr2g0277821 34.000 200 129 2 1 197 631 830 5.64e-27 108
Msa0897660 MtrunA17_Chr4g0058591 38.251 183 110 3 1 181 329 510 8.27e-27 107
Msa0897660 MtrunA17_Chr8g0386451 33.186 226 141 4 1 217 420 644 9.33e-27 108
Msa0897660 MtrunA17_Chr8g0347161 30.531 226 144 4 1 213 234 459 1.12e-26 107
Msa0897660 MtrunA17_Chr2g0301281 28.472 288 134 7 1 217 171 457 2.93e-26 106
Msa0897660 MtrunA17_Chr4g0063551 36.946 203 119 4 1 195 278 479 4.88e-26 105
Msa0897660 MtrunA17_Chr1g0149251 30.189 212 145 3 1 210 88 298 5.45e-26 103
Msa0897660 MtrunA17_Chr4g0029191 27.431 288 137 6 1 217 174 460 6.69e-26 105
Msa0897660 MtrunA17_Chr8g0347171 33.971 209 123 4 1 197 292 497 5.39e-25 102
Msa0897660 MtrunA17_Chr4g0003441 30.189 212 145 3 1 210 232 442 1.73e-24 100
Msa0897660 MtrunA17_Chr4g0004301 28.571 280 151 6 1 238 178 450 2.62e-24 100
Msa0897660 MtrunA17_Chr5g0434301 28.571 280 151 6 1 238 178 450 3.13e-24 100
Msa0897660 MtrunA17_Chr6g0466611 32.227 211 128 6 1 198 273 481 1.45e-23 99.0
Msa0897660 MtrunA17_Chr2g0299681 30.556 216 144 3 1 211 163 377 4.01e-23 96.7
Msa0897660 MtrunA17_Chr8g0342861 30.556 216 144 3 1 211 163 377 4.43e-23 96.7
Msa0897660 MtrunA17_Chr2g0297261 27.686 242 156 6 2 228 157 394 6.36e-23 95.9
Msa0897660 MtrunA17_Chr4g0070981 30.093 216 145 3 1 211 163 377 1.22e-22 95.1
Msa0897660 MtrunA17_Chr2g0329931 30.556 216 144 3 1 211 163 377 1.46e-22 95.1
Msa0897660 MtrunA17_Chr7g0236831 26.866 268 140 6 1 214 307 572 8.23e-22 94.0
Msa0897660 MtrunA17_Chr7g0263771 30.180 222 142 6 1 213 254 471 7.07e-19 85.1
Msa0897660 MtrunA17_Chr1g0179761 32.195 205 127 7 1 195 207 409 5.85e-18 82.4
Msa0897660 MtrunA17_Chr1g0192021 27.426 237 130 6 1 195 155 391 1.80e-17 80.9
Msa0897660 MtrunA17_Chr1g0204391 29.565 230 134 9 1 216 192 407 1.76e-16 78.2
Msa0897660 MtrunA17_Chr8g0354761 25.455 220 154 5 1 211 131 349 1.79e-15 75.1
Msa0897660 MtrunA17_Chr2g0309551 25.397 252 145 4 1 210 249 499 7.41e-15 73.2
Msa0897660 MtrunA17_Chr6g0475251 28.384 229 138 7 1 216 235 450 9.64e-15 73.2
Msa0897660 MtrunA17_Chr6g0461751 27.064 218 149 5 1 212 269 482 1.46e-13 69.7
Msa0897660 MtrunA17_Chr1g0169331 27.805 205 136 5 1 196 142 343 3.08e-12 65.5
Msa0897660 MtrunA17_Chr3g0145781 27.468 233 146 10 1 211 265 496 2.88e-11 62.8
Msa0897660 MtrunA17_Chr3g0137901 30.894 123 85 0 88 210 12 134 5.36e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0897660 AT5G60990.1 74.654 217 54 1 1 216 144 360 9.77e-115 336
Msa0897660 AT5G65900.1 43.379 219 121 2 1 216 281 499 2.01e-50 174
Msa0897660 AT3G18600.1 42.466 219 124 1 1 217 216 434 5.10e-49 169
Msa0897660 AT1G16280.1 42.593 216 119 2 1 211 181 396 5.35e-46 160
Msa0897660 AT5G05450.1 37.333 225 126 2 1 210 147 371 1.53e-39 144
Msa0897660 AT1G71370.1 38.073 218 129 3 1 212 147 364 1.05e-36 135
Msa0897660 AT4G16630.1 35.354 198 125 1 1 195 293 490 3.73e-35 132
Msa0897660 AT5G26742.3 36.916 214 130 4 1 211 140 351 5.80e-34 129
Msa0897660 AT5G26742.1 36.916 214 130 4 1 211 233 444 6.69e-34 129
Msa0897660 AT5G26742.2 36.916 214 130 4 1 211 233 444 6.70e-34 129
Msa0897660 AT3G22330.1 34.579 214 133 5 1 210 231 441 1.19e-31 122
Msa0897660 AT5G54910.1 36.453 203 121 6 1 197 198 398 1.28e-31 122
Msa0897660 AT3G01540.1 34.034 238 144 6 1 233 285 514 1.43e-31 122
Msa0897660 AT3G01540.4 34.034 238 144 6 1 233 285 514 1.65e-31 122
Msa0897660 AT3G01540.2 34.034 238 144 6 1 233 285 514 1.65e-31 122
Msa0897660 AT3G01540.3 34.034 238 144 6 1 233 285 514 1.65e-31 122
Msa0897660 AT5G63120.2 38.071 197 119 3 1 195 293 488 4.61e-31 120
Msa0897660 AT1G71280.1 37.895 190 96 3 1 186 140 311 4.69e-31 119
Msa0897660 AT5G14610.7 34.034 238 144 6 1 233 157 386 6.24e-31 119
Msa0897660 AT5G14610.3 34.034 238 144 6 1 233 157 386 6.24e-31 119
Msa0897660 AT2G47330.1 36.364 198 119 3 1 194 356 550 8.41e-31 120
Msa0897660 AT1G71280.2 38.298 188 94 3 1 184 140 309 1.62e-30 115
Msa0897660 AT3G06480.1 35.185 216 131 5 1 211 562 773 1.76e-30 119
Msa0897660 AT5G14610.5 34.034 238 144 6 1 233 296 525 2.07e-30 119
Msa0897660 AT5G14610.6 34.034 238 144 6 1 233 288 517 2.22e-30 119
Msa0897660 AT5G14610.2 34.034 238 144 6 1 233 288 517 2.25e-30 119
Msa0897660 AT4G15850.1 31.008 258 135 5 1 216 180 436 2.72e-30 117
Msa0897660 AT5G14610.1 34.034 238 144 6 1 233 356 585 3.01e-30 118
Msa0897660 AT1G55150.1 38.579 197 118 3 1 195 227 422 3.85e-30 117
Msa0897660 AT3G61240.2 34.123 211 135 3 1 210 247 454 5.17e-30 117
Msa0897660 AT3G61240.1 34.123 211 135 3 1 210 247 454 5.17e-30 117
Msa0897660 AT2G33730.1 34.562 217 118 4 1 197 444 656 5.48e-30 117
Msa0897660 AT1G55150.2 38.579 197 118 3 1 195 252 447 8.18e-30 116
Msa0897660 AT4G00660.1 33.175 211 137 3 1 210 254 461 1.09e-29 116
Msa0897660 AT4G00660.2 33.175 211 137 3 1 210 254 461 1.09e-29 116
Msa0897660 AT5G63630.2 33.628 226 137 5 1 213 381 606 1.60e-29 116
Msa0897660 AT5G63630.1 33.628 226 137 5 1 213 187 412 1.91e-29 115
Msa0897660 AT3G22310.2 33.488 215 134 6 1 210 243 453 8.38e-29 114
Msa0897660 AT3G22310.1 33.488 215 134 6 1 210 243 453 8.75e-29 114
Msa0897660 AT5G51280.1 34.518 197 127 2 1 197 283 477 9.96e-29 114
Msa0897660 AT2G45810.1 33.175 211 137 3 1 210 277 484 1.10e-28 113
Msa0897660 AT1G31970.1 35.294 204 126 4 1 199 246 448 1.82e-28 112
Msa0897660 AT5G08620.1 31.858 226 141 4 1 213 213 438 3.86e-28 112
Msa0897660 AT5G08610.1 30.531 226 144 4 1 213 515 740 3.26e-27 109
Msa0897660 AT1G20920.4 32.000 200 133 2 1 197 657 856 1.38e-26 108
Msa0897660 AT1G20920.6 32.000 200 133 2 1 197 657 856 1.38e-26 108
Msa0897660 AT1G20920.3 32.000 200 133 2 1 197 657 856 1.38e-26 108
Msa0897660 AT1G20920.7 32.000 200 133 2 1 197 657 856 1.38e-26 108
Msa0897660 AT1G20920.5 32.000 200 133 2 1 197 657 856 1.38e-26 108
Msa0897660 AT1G20920.1 32.000 200 133 2 1 197 657 856 1.38e-26 108
Msa0897660 AT1G28180.1 33.755 237 146 6 1 230 104 336 1.78e-26 105
Msa0897660 AT5G14610.4 36.364 198 115 6 1 193 296 487 2.34e-26 106
Msa0897660 AT3G58570.1 34.615 208 124 3 1 197 279 485 2.54e-26 107
Msa0897660 AT1G20920.2 32.000 200 133 2 1 197 319 518 2.74e-26 107
Msa0897660 AT5G63120.1 37.705 183 111 3 1 181 293 474 4.05e-26 105
Msa0897660 AT5G63120.3 37.705 183 111 3 1 181 293 474 4.12e-26 105
Msa0897660 AT5G63120.4 37.705 183 111 3 1 181 293 474 4.12e-26 105
Msa0897660 AT5G63120.5 37.705 183 111 3 1 181 293 474 4.12e-26 105
Msa0897660 AT5G11170.2 31.132 212 143 3 1 210 88 298 4.89e-26 103
Msa0897660 AT4G33370.1 33.333 195 128 2 1 195 234 426 6.77e-26 105
Msa0897660 AT3G58510.1 34.466 206 125 4 1 197 284 488 6.97e-26 105
Msa0897660 AT3G58510.3 34.466 206 125 4 1 197 284 488 6.97e-26 105
Msa0897660 AT3G58510.2 34.466 206 125 4 1 197 284 488 6.97e-26 105
Msa0897660 AT3G06480.2 34.872 195 118 5 1 190 562 752 8.24e-26 105
Msa0897660 AT5G11170.1 31.132 212 143 3 1 210 171 381 9.93e-26 104
Msa0897660 AT5G11200.1 31.132 212 143 3 1 210 171 381 9.93e-26 104
Msa0897660 AT2G42520.2 34.615 208 124 4 1 197 292 498 1.07e-25 105
Msa0897660 AT2G42520.1 34.615 208 124 4 1 197 292 498 1.07e-25 105
Msa0897660 AT2G42520.3 34.615 208 124 4 1 197 292 498 1.07e-25 105
Msa0897660 AT3G19760.1 28.512 242 154 6 2 228 159 396 1.16e-24 101
Msa0897660 AT1G63250.1 31.858 226 144 5 1 217 462 686 1.39e-24 102
Msa0897660 AT2G07750.1 31.858 226 144 5 1 216 509 734 2.19e-24 101
Msa0897660 AT1G77030.1 29.302 215 146 3 1 211 153 365 2.43e-24 101
Msa0897660 AT3G13920.4 30.556 216 144 3 1 211 157 371 2.33e-23 97.4
Msa0897660 AT3G13920.1 30.556 216 144 3 1 211 162 376 2.53e-23 97.4
Msa0897660 AT3G09620.1 32.500 200 103 4 1 197 524 694 2.93e-23 98.6
Msa0897660 AT3G09620.2 32.500 200 103 4 1 197 525 695 3.01e-23 98.6
Msa0897660 AT3G13920.3 30.556 216 144 3 1 211 152 366 3.60e-23 97.1
Msa0897660 AT3G13920.5 30.556 216 144 3 1 211 166 380 3.86e-23 97.1
Msa0897660 AT3G13920.2 30.556 216 144 3 1 211 162 376 4.34e-23 97.1
Msa0897660 AT1G72730.1 30.093 216 145 3 1 211 164 378 9.54e-23 95.9
Msa0897660 AT1G54270.2 30.093 216 145 3 1 211 157 371 4.25e-22 94.0
Msa0897660 AT1G54270.1 30.093 216 145 3 1 211 162 376 5.54e-22 94.0
Msa0897660 AT1G51380.1 26.122 245 162 5 2 231 146 386 1.73e-21 92.4
Msa0897660 AT4G09730.1 30.332 211 132 5 1 198 244 452 9.62e-21 90.9
Msa0897660 AT3G09720.2 27.727 220 150 5 1 213 263 480 5.07e-19 85.9
Msa0897660 AT3G09720.1 27.727 220 150 5 1 213 263 480 5.07e-19 85.9
Msa0897660 AT3G16840.2 24.296 284 158 6 1 227 335 618 2.63e-17 81.3
Msa0897660 AT3G16840.1 24.296 284 158 6 1 227 334 617 2.65e-17 81.3
Msa0897660 AT4G34910.1 29.032 217 112 4 22 197 201 416 5.04e-16 77.4
Msa0897660 AT3G53110.1 27.723 202 139 4 1 196 219 419 5.69e-16 77.0
Msa0897660 AT3G02065.1 29.258 229 149 7 1 219 104 329 4.41e-15 73.9
Msa0897660 AT3G02065.3 28.509 228 152 6 1 219 241 466 9.72e-15 73.2
Msa0897660 AT3G02065.2 28.509 228 152 6 1 219 241 466 9.72e-15 73.2
Msa0897660 AT5G62190.1 27.948 229 139 7 1 216 229 444 1.08e-14 73.6

Find 63 sgRNAs with CRISPR-Local

Find 638 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTCCTAAGGGTTTGTTTA+AGG 0.148508 6_1:+90028190 Msa0897660:CDS
AGAGAGTCAAATTATTTATT+TGG 0.186018 6_1:+90035884 Msa0897660:three_prime_UTR
CAAATTATTTATTTGGTTAT+AGG 0.188234 6_1:+90035891 Msa0897660:three_prime_UTR
TGACTCATATGACCATTAAT+TGG 0.210193 6_1:-90034918 None:intergenic
TTAAAAGCCATCCCAATTAA+TGG 0.257390 6_1:+90034906 Msa0897660:CDS
CTCTTTAAGGTTGGGACTCC+TGG 0.268471 6_1:+90026973 None:intergenic
ATTTATTTGGTTATAGGAAT+AGG 0.319788 6_1:+90035897 Msa0897660:three_prime_UTR
GGCTTCTTGCTTTGATTCTC+AGG 0.353350 6_1:+90034874 Msa0897660:CDS
GCCTTGAATATGTTCAAGTC+TGG 0.364558 6_1:+90035136 Msa0897660:CDS
CAACTTACTTTGGAGTTTGT+AGG 0.371721 6_1:-90035244 None:intergenic
GGGAAGAAACGGAGGGGCGA+AGG 0.411354 6_1:+90035682 Msa0897660:CDS
CGTGTCGACCGTAGAATACT+TGG 0.412831 6_1:-90028382 None:intergenic
TGTATACATTCTCACTGAAA+TGG 0.429004 6_1:+90034806 Msa0897660:CDS
TCTTGCTAGATTAAAATACT+TGG 0.431120 6_1:+90027035 Msa0897660:CDS
GACTCATATGACCATTAATT+GGG 0.432590 6_1:-90034917 None:intergenic
GCCCCTCCGTTTCTTCCCTC+CGG 0.434610 6_1:-90035677 None:intergenic
TTTGTTCGTGTAGAAAATGA+AGG 0.439293 6_1:+90035651 Msa0897660:intron
GGATATTCCAGCAGTAGATA+TGG 0.443401 6_1:+90035204 Msa0897660:CDS
TGGGACTCCTGGACGTGTCT+TGG 0.443992 6_1:+90026984 Msa0897660:CDS
TTCAAGGCTCCAAGTCGCTT+TGG 0.445483 6_1:-90035121 None:intergenic
CCCAGACTTGAACATATTCA+AGG 0.451067 6_1:-90035137 None:intergenic
TATTATGGCTGTACCTTCAC+AGG 0.467525 6_1:-90028216 None:intergenic
GCTTTGATTCTCAGGAATCT+CGG 0.480443 6_1:+90034882 Msa0897660:CDS
TTCAGGTCGAGAAGCTCCTA+AGG 0.482956 6_1:+90028178 Msa0897660:intron
TTAATCACCATATCTACTGC+TGG 0.487418 6_1:-90035211 None:intergenic
TTGTACTGACGTAGCTAGTA+GGG 0.489265 6_1:+90035177 Msa0897660:CDS
TTTGTACTGACGTAGCTAGT+AGG 0.492940 6_1:+90035176 Msa0897660:CDS
AGGTGATCCAAGACACGTCC+AGG 0.493289 6_1:-90026991 None:intergenic
CGGAGGGGCGAAGGAGATGT+AGG 0.496627 6_1:+90035691 Msa0897660:CDS
CCTTGAATATGTTCAAGTCT+GGG 0.502535 6_1:+90035137 Msa0897660:CDS
AATTAATGGTCATATGAGTC+AGG 0.504543 6_1:+90034920 Msa0897660:CDS
TTCTGCTACGATGACAAAGA+AGG 0.506266 6_1:+90027826 Msa0897660:CDS
TACATTCTCACTGAAATGGC+TGG 0.508310 6_1:+90034810 Msa0897660:CDS
TCTAGCAAGAGAAAATCCTT+TGG 0.511987 6_1:-90027022 None:intergenic
GATGATGTTGACAAATACTT+TGG 0.513823 6_1:+90035721 Msa0897660:CDS
AGGTCTTAGACGAGGCAGAC+AGG 0.519255 6_1:+90027726 Msa0897660:intron
TGAGAATCAAAGCAAGAAGC+CGG 0.521052 6_1:-90034872 None:intergenic
AGGAATGTCCTCCGCTCGCG+AGG 0.522814 6_1:-90027800 None:intergenic
CTTCTTGCCAGCAAAACATA+AGG 0.524579 6_1:+90028422 Msa0897660:CDS
GTGTAGAAAATGAAGGAATC+CGG 0.525749 6_1:+90035658 Msa0897660:intron
GATTCCTTAAACAAACCCTT+AGG 0.542944 6_1:-90028194 None:intergenic
CATATGACCATTAATTGGGA+TGG 0.551645 6_1:-90034913 None:intergenic
GGGCGAAGGAGATGTAGGAG+AGG 0.552917 6_1:+90035696 Msa0897660:CDS
CTCGGACATGTGATTCAACC+CGG 0.556610 6_1:+90034853 Msa0897660:CDS
ATCCGGAGGGAAGAAACGGA+GGG 0.560046 6_1:+90035675 Msa0897660:CDS
TGACGTAGCTAGTAGGGGAC+TGG 0.561132 6_1:+90035183 Msa0897660:CDS
GGCAGACAGGCTGTTGAATG+AGG 0.561420 6_1:+90027739 Msa0897660:CDS
AGGAATCCGGAGGGAAGAAA+CGG 0.576357 6_1:+90035671 Msa0897660:CDS
TTGTTTAAGGAATCCTGTGA+AGG 0.577631 6_1:+90028203 Msa0897660:CDS
GAGAATCAAAGCAAGAAGCC+GGG 0.583378 6_1:-90034871 None:intergenic
AACATCATCCAAGTATTCTA+CGG 0.591700 6_1:+90028374 Msa0897660:CDS
AATCCGGAGGGAAGAAACGG+AGG 0.606073 6_1:+90035674 Msa0897660:CDS
CTTGAATATGTTCAAGTCTG+GGG 0.609798 6_1:+90035138 Msa0897660:CDS
GTACATCAATGGTGTTCACT+CGG 0.612916 6_1:+90034835 Msa0897660:CDS
TCAGGTCGAGAAGCTCCTAA+GGG 0.617156 6_1:+90028179 Msa0897660:intron
TTTCAGTGAGAATGTATACA+AGG 0.627924 6_1:-90034803 None:intergenic
TCCGGAGGGAAGAAACGGAG+GGG 0.632176 6_1:+90035676 Msa0897660:CDS
TTCTGAGCAGGTCTTAGACG+AGG 0.637055 6_1:+90027718 Msa0897660:intron
TACTAGCTACGTCAGTACAA+AGG 0.652821 6_1:-90035174 None:intergenic
AATGGCTGGAAGTACATCAA+TGG 0.660650 6_1:+90034824 Msa0897660:CDS
TGTACTGACGTAGCTAGTAG+GGG 0.666251 6_1:+90035178 Msa0897660:CDS
TAGAAAATGAAGGAATCCGG+AGG 0.670641 6_1:+90035661 Msa0897660:intron
AGAAAATGAAGGAATCCGGA+GGG 0.705779 6_1:+90035662 Msa0897660:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTTAAGTATAATCA+AGG - chr6_1:90027343-90027362 None:intergenic 10.0%
!!! TATGATACTTTTTTTTAAAA+AGG - chr6_1:90027481-90027500 None:intergenic 10.0%
!! TTTAATATAAAAATCTTCAT+TGG + chr6_1:90028288-90028307 Msa0897660:intron 10.0%
!!! AATTGAAATACAATAATTTT+TGG - chr6_1:90028465-90028484 None:intergenic 10.0%
!! TAAAATAATAACATTAGAAT+AGG - chr6_1:90033939-90033958 None:intergenic 10.0%
!!! AAAGCAAAATATATTTTTTT+TGG + chr6_1:90034610-90034629 Msa0897660:intron 10.0%
!!! TACTTCAATTATATTTGTTA+AGG + chr6_1:90027405-90027424 Msa0897660:intron 15.0%
!!! ACTTCAATTATATTTGTTAA+GGG + chr6_1:90027406-90027425 Msa0897660:intron 15.0%
!!! AACATTTCATTTTTTTAAGT+CGG - chr6_1:90027662-90027681 None:intergenic 15.0%
!!! TTTTTTTTAAAACATGTATC+AGG + chr6_1:90028593-90028612 Msa0897660:intron 15.0%
!!! TTTTTTTAAAACATGTATCA+GGG + chr6_1:90028594-90028613 Msa0897660:intron 15.0%
!! TAAAATAATAGCATTAGAAT+AGG - chr6_1:90028934-90028953 None:intergenic 15.0%
!! TAAAATAATAGCATTAGAAT+AGG - chr6_1:90028934-90028953 None:intergenic 15.0%
!!! TATTTTAACCTATAACAAAT+GGG - chr6_1:90034532-90034551 None:intergenic 15.0%
!!! TTATTTTAACCTATAACAAA+TGG - chr6_1:90034533-90034552 None:intergenic 15.0%
!! GATATAAATATGATATTCTT+TGG + chr6_1:90034563-90034582 Msa0897660:intron 15.0%
!!! TAACAAAATTTCATTCATTT+TGG + chr6_1:90034697-90034716 Msa0897660:intron 15.0%
!!! AACAAAATTTCATTCATTTT+GGG + chr6_1:90034698-90034717 Msa0897660:intron 15.0%
!!! GTAATTTATTAGTATTTTCA+TGG + chr6_1:90035343-90035362 Msa0897660:intron 15.0%
!!! ATGAACATAATATTTTTTGT+CGG - chr6_1:90035802-90035821 None:intergenic 15.0%
!! CAAATTATTTATTTGGTTAT+AGG + chr6_1:90035891-90035910 Msa0897660:three_prime_UTR 15.0%
!!! TTCTTCACAATTTTTTAATC+AGG + chr6_1:90027064-90027083 Msa0897660:intron 20.0%
!!! TTTTACATTCAGTAATTAAG+TGG + chr6_1:90027096-90027115 Msa0897660:intron 20.0%
!! GTATATACAGACATAAAATA+TGG - chr6_1:90027143-90027162 None:intergenic 20.0%
!!! ATATTATTTTCTGCGTAATA+AGG + chr6_1:90027168-90027187 Msa0897660:intron 20.0%
!!! TATTATTTTCTGCGTAATAA+GGG + chr6_1:90027169-90027188 Msa0897660:intron 20.0%
!! AGTTTCATATTAATACACTA+AGG - chr6_1:90027251-90027270 None:intergenic 20.0%
!!! ATACAATAATTTTTGGACAA+GGG - chr6_1:90028458-90028477 None:intergenic 20.0%
!!! AATACAATAATTTTTGGACA+AGG - chr6_1:90028459-90028478 None:intergenic 20.0%
!! TCATTCAACTTCTTAATATT+AGG + chr6_1:90028502-90028521 Msa0897660:intron 20.0%
!!! TTCTTTTTTTTTTTCAGATG+TGG + chr6_1:90030151-90030170 Msa0897660:intron 20.0%
!!! AAAGTTGAATTCTCAAATTT+TGG - chr6_1:90031269-90031288 None:intergenic 20.0%
!! AAAAATGTCACAAATTATTG+TGG - chr6_1:90031437-90031456 None:intergenic 20.0%
!! ATCTCAATTTCATAAGAAAT+TGG + chr6_1:90031999-90032018 Msa0897660:intron 20.0%
!! GTAATTATGTATTTAGTCAA+TGG - chr6_1:90032779-90032798 None:intergenic 20.0%
!!! TTTTTTGGTAAGTAGTATAA+AGG + chr6_1:90034625-90034644 Msa0897660:intron 20.0%
!! TCTATACTATCTTAGAATTT+GGG + chr6_1:90035458-90035477 Msa0897660:intron 20.0%
!! AATTGACAACAAAAAAAACT+TGG - chr6_1:90035832-90035851 None:intergenic 20.0%
!!! TGAGATTTTCAAAACAAATA+TGG + chr6_1:90035861-90035880 Msa0897660:three_prime_UTR 20.0%
!! AGAGAGTCAAATTATTTATT+TGG + chr6_1:90035884-90035903 Msa0897660:three_prime_UTR 20.0%
!! ATTTATTTGGTTATAGGAAT+AGG + chr6_1:90035897-90035916 Msa0897660:three_prime_UTR 20.0%
!!! AAAATCCTTTGGTGTTTTTT+AGG - chr6_1:90027014-90027033 None:intergenic 25.0%
! TCTTGCTAGATTAAAATACT+TGG + chr6_1:90027035-90027054 Msa0897660:CDS 25.0%
!! ATTATTTTCTGCGTAATAAG+GGG + chr6_1:90027170-90027189 Msa0897660:intron 25.0%
! CTAAAAATAAAGCATGTTAC+AGG - chr6_1:90027217-90027236 None:intergenic 25.0%
! TATAACTTATATGTCTTCCA+AGG + chr6_1:90027552-90027571 Msa0897660:intron 25.0%
!! GAATCACTTAATGAGATTTT+AGG + chr6_1:90027770-90027789 Msa0897660:CDS 25.0%
! CTCAGAAAATGTAAAGAAAA+TGG - chr6_1:90027955-90027974 None:intergenic 25.0%
! CATAATACTTTCATCTCTTA+GGG + chr6_1:90028232-90028251 Msa0897660:intron 25.0%
! ATAATACTTTCATCTCTTAG+GGG + chr6_1:90028233-90028252 Msa0897660:intron 25.0%
! TGTGAAAAATCAGTGTATAT+AGG - chr6_1:90028331-90028350 None:intergenic 25.0%
!!! GTGTATATATTAGAAGTGTT+GGG + chr6_1:90028700-90028719 Msa0897660:intron 25.0%
! ACTTCTTTCTCTATAAATAG+AGG - chr6_1:90029131-90029150 None:intergenic 25.0%
!!! TTTGTTTTCTTTCTTTGCTT+TGG + chr6_1:90029270-90029289 Msa0897660:intron 25.0%
! ATTTAAAGAGAAATTGTCCA+GGG - chr6_1:90029953-90029972 None:intergenic 25.0%
! AACACTATATTGTATCTCTT+GGG - chr6_1:90030428-90030447 None:intergenic 25.0%
! AAACACTATATTGTATCTCT+TGG - chr6_1:90030429-90030448 None:intergenic 25.0%
! ACTTCTTTCTCTATAAATAG+AGG - chr6_1:90029131-90029150 None:intergenic 25.0%
!!! TTTGTTTTCTTTCTTTGCTT+TGG + chr6_1:90029270-90029289 Msa0897660:intron 25.0%
! TATGATTCACAGTGATTTAT+GGG - chr6_1:90030916-90030935 None:intergenic 25.0%
! ATATGATTCACAGTGATTTA+TGG - chr6_1:90030917-90030936 None:intergenic 25.0%
! TTTACGTTTGATTGATGAAT+TGG + chr6_1:90030948-90030967 Msa0897660:intron 25.0%
! TTTGATTGATGAATTGGAAA+GGG + chr6_1:90030954-90030973 Msa0897660:intron 25.0%
! CTTCATGATTTAATAAAGTC+AGG - chr6_1:90031065-90031084 None:intergenic 25.0%
!! CAATTGTTAGTTTCCAATTA+TGG - chr6_1:90031121-90031140 None:intergenic 25.0%
! GCAGAATTACAAGAAATAAA+AGG + chr6_1:90031140-90031159 Msa0897660:intron 25.0%
! TTATTAAAGAATGTCCAATC+AGG - chr6_1:90031700-90031719 None:intergenic 25.0%
! TTGGACATTCTTTAATAATG+TGG + chr6_1:90031702-90031721 Msa0897660:intron 25.0%
!! AAATTGAGATCTGATTTTGA+GGG - chr6_1:90031989-90032008 None:intergenic 25.0%
! CAAATCTTTATAAACAATGC+CGG + chr6_1:90032075-90032094 Msa0897660:intron 25.0%
! TTCTCATTTCATGAATCTTT+GGG - chr6_1:90032110-90032129 None:intergenic 25.0%
! ATTCTCATTTCATGAATCTT+TGG - chr6_1:90032111-90032130 None:intergenic 25.0%
!!! TGAAATTTCAGTTTTTCAAC+AGG - chr6_1:90032158-90032177 None:intergenic 25.0%
!! TATTTTCTCTGAGTTTAACA+TGG - chr6_1:90032673-90032692 None:intergenic 25.0%
! ATGTTAAACTCAGAGAAAAT+AGG + chr6_1:90032672-90032691 Msa0897660:intron 25.0%
! TGTTAAACTCAGAGAAAATA+GGG + chr6_1:90032673-90032692 Msa0897660:intron 25.0%
! TACAATAATGTAGAATATGC+TGG + chr6_1:90032812-90032831 Msa0897660:intron 25.0%
! AGAAGAACATCAATTTATGT+TGG - chr6_1:90033033-90033052 None:intergenic 25.0%
! ATTTAAAGAGAAATTGTCCA+GGG - chr6_1:90029953-90029972 None:intergenic 25.0%
! TAATAACATTAGAATAGGAG+TGG - chr6_1:90033934-90033953 None:intergenic 25.0%
!!! GTTATTATTTTATAGCACCT+AGG + chr6_1:90033947-90033966 Msa0897660:intron 25.0%
! ACTTCTTTCTCTATAAATAG+AGG - chr6_1:90029131-90029150 None:intergenic 25.0%
!!! TTTGTTTTCTTTCTTTGCTT+TGG + chr6_1:90029270-90029289 Msa0897660:intron 25.0%
! TTGACAAACACAATAATCAA+AGG - chr6_1:90034756-90034775 None:intergenic 25.0%
!!! TAGAGATATTTTGTTGTCAT+TGG - chr6_1:90035083-90035102 None:intergenic 25.0%
!!! AGTATTTTCATGGCTATTTT+AGG + chr6_1:90035353-90035372 Msa0897660:intron 25.0%
! AATTCTTGTTGCATGATTTA+TGG - chr6_1:90035404-90035423 None:intergenic 25.0%
!! ACAAGAATTTTTGTATTCAC+TGG + chr6_1:90035415-90035434 Msa0897660:intron 25.0%
!! TATAGACTATAGAGTGTTAA+TGG - chr6_1:90035444-90035463 None:intergenic 25.0%
! GTCTATACTATCTTAGAATT+TGG + chr6_1:90035457-90035476 Msa0897660:intron 25.0%
! CTAAGTTGTAAAGTGATATA+TGG - chr6_1:90035540-90035559 None:intergenic 25.0%
! CATATATCACTTTACAACTT+AGG + chr6_1:90035538-90035557 Msa0897660:intron 25.0%
!! TTATTTTCATATCTCCATGT+TGG - chr6_1:90035568-90035587 None:intergenic 25.0%
!! TAGGAATAGGTTTTCAAATT+AGG + chr6_1:90035910-90035929 Msa0897660:three_prime_UTR 25.0%
!! ATTGTTTTGCATGCAAAACT+AGG + chr6_1:90027295-90027314 Msa0897660:intron 30.0%
! GTTTTCCTGTTTAATTGACT+TGG + chr6_1:90027432-90027451 Msa0897660:intron 30.0%
ATAAGCCAAGTCAATTAAAC+AGG - chr6_1:90027440-90027459 None:intergenic 30.0%
AATGAAATGTTTCTTAGCTG+TGG + chr6_1:90027671-90027690 Msa0897660:intron 30.0%
GAATATTAAGATAAGATGCC+TGG - chr6_1:90027924-90027943 None:intergenic 30.0%
!!! TTTCTGAGATCACTAGATTT+TGG + chr6_1:90027967-90027986 Msa0897660:intron 30.0%
! AAGTAACAGCTTTTGTATAG+CGG + chr6_1:90028027-90028046 Msa0897660:intron 30.0%
TTACACAAGCTGTTACAATA+CGG - chr6_1:90028105-90028124 None:intergenic 30.0%
! AATAGAAGAAGTTGCACTTT+TGG + chr6_1:90028152-90028171 Msa0897660:intron 30.0%
!! CCTAAGAGATGAAAGTATTA+TGG - chr6_1:90028234-90028253 None:intergenic 30.0%
CCATAATACTTTCATCTCTT+AGG + chr6_1:90028231-90028250 Msa0897660:intron 30.0%
AACATCATCCAAGTATTCTA+CGG + chr6_1:90028374-90028393 Msa0897660:CDS 30.0%
! GGTGTATATATTAGAAGTGT+TGG + chr6_1:90028699-90028718 Msa0897660:intron 30.0%
AGTAATAATTCCCTAGTTGT+CGG - chr6_1:90028831-90028850 None:intergenic 30.0%
AACACTATACTGTATCTCTT+GGG - chr6_1:90028895-90028914 None:intergenic 30.0%
AAACACTATACTGTATCTCT+TGG - chr6_1:90028896-90028915 None:intergenic 30.0%
!! GCTATTATTTTATAGCACCT+AGG + chr6_1:90028942-90028961 Msa0897660:intron 30.0%
GTATCATCTCTATAATTCCT+AGG - chr6_1:90028962-90028981 None:intergenic 30.0%
AAATAGAGGCAATGAATTGA+GGG - chr6_1:90029117-90029136 None:intergenic 30.0%
TAAATAGAGGCAATGAATTG+AGG - chr6_1:90029118-90029137 None:intergenic 30.0%
TTTGGTTGTACAACTTTCTT+TGG + chr6_1:90029288-90029307 Msa0897660:intron 30.0%
TATCGGTATGGACAATAAAA+GGG - chr6_1:90029595-90029614 None:intergenic 30.0%
TTATCGGTATGGACAATAAA+AGG - chr6_1:90029596-90029615 None:intergenic 30.0%
! TTATGGTGGAGTATGATTAT+CGG - chr6_1:90029612-90029631 None:intergenic 30.0%
CAAGTGAAGTATACTCTTTA+TGG - chr6_1:90029629-90029648 None:intergenic 30.0%
! TTTTGACGTGAAGAAATTCT+TGG - chr6_1:90029665-90029684 None:intergenic 30.0%
!! CAATAACTTGTCCTTTTTCA+TGG + chr6_1:90029812-90029831 Msa0897660:intron 30.0%
GAAGATAAAATGTGTCCTTA+TGG - chr6_1:90029851-90029870 None:intergenic 30.0%
!! AGTTTTTGAAAAAGACTCTG+AGG - chr6_1:90029925-90029944 None:intergenic 30.0%
TTTAAAGAGAAATTGTCCAG+GGG - chr6_1:90029952-90029971 None:intergenic 30.0%
CATTTAAAGAGAAATTGTCC+AGG - chr6_1:90029954-90029973 None:intergenic 30.0%
! TTTGATGACAGAATCAACTT+TGG - chr6_1:90030044-90030063 None:intergenic 30.0%
! AAAGAAGTGTGATATTGTGA+AGG - chr6_1:90030137-90030156 None:intergenic 30.0%
CTAAGAATTGTGATATCTCA+CGG + chr6_1:90030206-90030225 Msa0897660:intron 30.0%
CACAACATAAGAATATAACG+TGG + chr6_1:90030297-90030316 Msa0897660:intron 30.0%
TTCACATAGTAATAATTCCC+TGG - chr6_1:90028838-90028857 None:intergenic 30.0%
AATAGCATTAGAATAGGAGT+GGG - chr6_1:90028928-90028947 None:intergenic 30.0%
TAATAGCATTAGAATAGGAG+TGG - chr6_1:90028929-90028948 None:intergenic 30.0%
!! GCTATTATTTTATAGCACCT+AGG + chr6_1:90028942-90028961 Msa0897660:intron 30.0%
GTATCATCTCTATAATTCCT+AGG - chr6_1:90028962-90028981 None:intergenic 30.0%
AAATAGAGGCAATGAATTGA+GGG - chr6_1:90029117-90029136 None:intergenic 30.0%
TAAATAGAGGCAATGAATTG+AGG - chr6_1:90029118-90029137 None:intergenic 30.0%
CACAATACAAATACGTTAGT+GGG - chr6_1:90030869-90030888 None:intergenic 30.0%
TATTGTGCATGAGATATAAC+AGG + chr6_1:90030882-90030901 Msa0897660:intron 30.0%
ATGATTCACAGTGATTTATG+GGG - chr6_1:90030915-90030934 None:intergenic 30.0%
TCACTGTGAATCATATCAAA+AGG + chr6_1:90030921-90030940 Msa0897660:intron 30.0%
GTTTGATTGATGAATTGGAA+AGG + chr6_1:90030953-90030972 Msa0897660:intron 30.0%
GATTGCAATTCTTGTAAACT+TGG - chr6_1:90030996-90031015 None:intergenic 30.0%
TTAATAAAGTCAGGAGTTCT+TGG - chr6_1:90031056-90031075 None:intergenic 30.0%
! TCATGAAGTACATTTGAGTT+TGG + chr6_1:90031077-90031096 Msa0897660:intron 30.0%
!!! AAATTTTGGTTGTTTTGTGC+AGG - chr6_1:90031255-90031274 None:intergenic 30.0%
TTGAAAATACATACTGCAGA+TGG - chr6_1:90031410-90031429 None:intergenic 30.0%
TTTAAGAGCAGCAACATTAT+TGG + chr6_1:90031454-90031473 Msa0897660:intron 30.0%
TTAAAATACCAAGGAGAACT+AGG + chr6_1:90031500-90031519 Msa0897660:intron 30.0%
! ATCATTTGTTGAACCATTTC+AGG + chr6_1:90031569-90031588 Msa0897660:intron 30.0%
ATTAGGCAAATTCTTATCCT+CGG + chr6_1:90031607-90031626 Msa0897660:intron 30.0%
TTCATTAAGACATTCATCCA+AGG + chr6_1:90031925-90031944 Msa0897660:intron 30.0%
! GAAATTGAGATCTGATTTTG+AGG - chr6_1:90031990-90032009 None:intergenic 30.0%
TATAAAGATTTGTCAGCTGA+GGG - chr6_1:90032067-90032086 None:intergenic 30.0%
TTATAAAGATTTGTCAGCTG+AGG - chr6_1:90032068-90032087 None:intergenic 30.0%
CTGAAATTTCATGTTCAAGT+TGG + chr6_1:90032167-90032186 Msa0897660:intron 30.0%
TGGAATAGTTCTTTCCATTT+AGG + chr6_1:90032449-90032468 Msa0897660:intron 30.0%
!!! GTTATTTTTGTTCGCCTAAA+TGG - chr6_1:90032466-90032485 None:intergenic 30.0%
AACAAGAAACTAGAGAAACT+AGG + chr6_1:90032549-90032568 Msa0897660:intron 30.0%
TAGAGAAACTAGGAAATCAA+GGG + chr6_1:90032559-90032578 Msa0897660:intron 30.0%
GTTTAACATGGTATCAATCT+TGG - chr6_1:90032661-90032680 None:intergenic 30.0%
ATGAAAACATTCCAGCAAAA+GGG - chr6_1:90032712-90032731 None:intergenic 30.0%
TATGAAAACATTCCAGCAAA+AGG - chr6_1:90032713-90032732 None:intergenic 30.0%
!! GTTATTCATTAGTGCTGATT+TGG - chr6_1:90032895-90032914 None:intergenic 30.0%
CAAGTGAAGTATACTCTTTA+TGG - chr6_1:90029629-90029648 None:intergenic 30.0%
!! CAATAACTTGTCCTTTTTCA+TGG + chr6_1:90029812-90029831 Msa0897660:intron 30.0%
GAAGATAAAATGTGTCCTTA+TGG - chr6_1:90029851-90029870 None:intergenic 30.0%
TTTAAAGAGAAATTGTCCAG+GGG - chr6_1:90029952-90029971 None:intergenic 30.0%
CATTTAAAGAGAAATTGTCC+AGG - chr6_1:90029954-90029973 None:intergenic 30.0%
! TTTGATGACAGAATCAACTT+TGG - chr6_1:90030044-90030063 None:intergenic 30.0%
! AAAGAAGTGTGATATTGTGA+AGG - chr6_1:90030137-90030156 None:intergenic 30.0%
!!! CACTTCTTTTTTTTCTGATG+TGG + chr6_1:90033623-90033642 Msa0897660:intron 30.0%
ACAATTCTTAGTATGCTTTG+TGG - chr6_1:90033669-90033688 None:intergenic 30.0%
CTAAGAATTGTGATATCTCA+CGG + chr6_1:90030206-90030225 Msa0897660:intron 30.0%
TTCACATAGTAATAATTCCC+TGG - chr6_1:90028838-90028857 None:intergenic 30.0%
AACACTATACTGTATCTCTT+GGG - chr6_1:90028895-90028914 None:intergenic 30.0%
AAACACTATACTGTATCTCT+TGG - chr6_1:90028896-90028915 None:intergenic 30.0%
GTATCATCTCTATAATTCCT+AGG - chr6_1:90028962-90028981 None:intergenic 30.0%
AAATAGAGGCAATGAATTGA+GGG - chr6_1:90029117-90029136 None:intergenic 30.0%
TAAATAGAGGCAATGAATTG+AGG - chr6_1:90029118-90029137 None:intergenic 30.0%
ACTTAAAAAGTAGTACCCTT+TGG + chr6_1:90034380-90034399 Msa0897660:intron 30.0%
TAAGTGAGAATCTCATAAGT+TGG + chr6_1:90034414-90034433 Msa0897660:intron 30.0%
! AGCAGCTGATATTTTCTAAA+GGG - chr6_1:90034448-90034467 None:intergenic 30.0%
! AAGCAGCTGATATTTTCTAA+AGG - chr6_1:90034449-90034468 None:intergenic 30.0%
ACATACATTCAAGGTTACAT+AGG + chr6_1:90034489-90034508 Msa0897660:intron 30.0%
GGTAAGTAGTATAAAGGAAA+TGG + chr6_1:90034631-90034650 Msa0897660:intron 30.0%
TTTCAGTGAGAATGTATACA+AGG - chr6_1:90034806-90034825 None:intergenic 30.0%
TGTATACATTCTCACTGAAA+TGG + chr6_1:90034806-90034825 Msa0897660:CDS 30.0%
TTAAAAGCCATCCCAATTAA+TGG + chr6_1:90034906-90034925 Msa0897660:CDS 30.0%
GACTCATATGACCATTAATT+GGG - chr6_1:90034920-90034939 None:intergenic 30.0%
TGACTCATATGACCATTAAT+TGG - chr6_1:90034921-90034940 None:intergenic 30.0%
AATTAATGGTCATATGAGTC+AGG + chr6_1:90034920-90034939 Msa0897660:CDS 30.0%
! CTACAAACACAAATAATGGA+GGG - chr6_1:90035055-90035074 None:intergenic 30.0%
ACACCTACAAACACAAATAA+TGG - chr6_1:90035059-90035078 None:intergenic 30.0%
! TCACTGTTAGCTTAATGTAA+AGG + chr6_1:90035318-90035337 Msa0897660:intron 30.0%
TTTGTTCGTGTAGAAAATGA+AGG + chr6_1:90035651-90035670 Msa0897660:intron 30.0%
GATGATGTTGACAAATACTT+TGG + chr6_1:90035721-90035740 Msa0897660:CDS 30.0%
GATCACCTAAAAAACACCAA+AGG + chr6_1:90027006-90027025 Msa0897660:CDS 35.0%
TCTAGCAAGAGAAAATCCTT+TGG - chr6_1:90027025-90027044 None:intergenic 35.0%
AAATGTTTCTTAGCTGTGGT+TGG + chr6_1:90027675-90027694 Msa0897660:intron 35.0%
TTGTCATCGTAGCAGAAAAA+AGG - chr6_1:90027823-90027842 None:intergenic 35.0%
! TTTTTATCCCTTTTCTCCCT+TGG + chr6_1:90027892-90027911 Msa0897660:intron 35.0%
TGCAGAAAAGCTTTCTCTAA+CGG - chr6_1:90027993-90028012 None:intergenic 35.0%
! AGTTGCACTTTTGGTATTTC+AGG + chr6_1:90028161-90028180 Msa0897660:intron 35.0%
GATTCCTTAAACAAACCCTT+AGG - chr6_1:90028197-90028216 None:intergenic 35.0%
TTGTTTAAGGAATCCTGTGA+AGG + chr6_1:90028203-90028222 Msa0897660:CDS 35.0%
! ACAGATACCTTATGTTTTGC+TGG - chr6_1:90028432-90028451 None:intergenic 35.0%
ATTCCATACTACTCTTGTTG+AGG + chr6_1:90028536-90028555 Msa0897660:intron 35.0%
TTCCATACTACTCTTGTTGA+GGG + chr6_1:90028537-90028556 Msa0897660:intron 35.0%
!! TAGAAGTGTTGGGAAATAAC+AGG + chr6_1:90028710-90028729 Msa0897660:intron 35.0%
CACAACACAAGAATATAACG+TGG + chr6_1:90028764-90028783 Msa0897660:intron 35.0%
GAGTGTGGGAAAAATACATT+GGG - chr6_1:90028988-90029007 None:intergenic 35.0%
AGAGTGTGGGAAAAATACAT+TGG - chr6_1:90028989-90029008 None:intergenic 35.0%
! GAGAGGAAAAATAGAGTGTT+GGG - chr6_1:90029021-90029040 None:intergenic 35.0%
TGAGAGGAAAAATAGAGTGT+TGG - chr6_1:90029022-90029041 None:intergenic 35.0%
GGAAGAACAGCAATTTATGT+TGG - chr6_1:90029559-90029578 None:intergenic 35.0%
ATCGGTATGGACAATAAAAG+GGG - chr6_1:90029594-90029613 None:intergenic 35.0%
GTGAAGTATACTCTTTATGG+TGG - chr6_1:90029626-90029645 None:intergenic 35.0%
ACGTGAAGAAATTCTTGGAA+TGG - chr6_1:90029660-90029679 None:intergenic 35.0%
AAAACCTTGCTGAAAGACTA+TGG + chr6_1:90029681-90029700 Msa0897660:intron 35.0%
AAAGGACAAGTTATTGCTAG+CGG - chr6_1:90029808-90029827 None:intergenic 35.0%
!! TGTCCTTTTTCATGGTATAG+CGG + chr6_1:90029820-90029839 Msa0897660:intron 35.0%
TTTCCGCTATACCATGAAAA+AGG - chr6_1:90029826-90029845 None:intergenic 35.0%
! TAGTAATGTCTCCCTTGTTT+CGG - chr6_1:90029895-90029914 None:intergenic 35.0%
TTAAAGAGAAATTGTCCAGG+GGG - chr6_1:90029951-90029970 None:intergenic 35.0%
!! ATTGTGAAGGTGTTGAAGAA+GGG - chr6_1:90030124-90030143 None:intergenic 35.0%
!! TATTGTGAAGGTGTTGAAGA+AGG - chr6_1:90030125-90030144 None:intergenic 35.0%
ACAATTCTTAGTATGCTCTG+TGG - chr6_1:90030197-90030216 None:intergenic 35.0%
AGTAATAATTCCCTGGTTGT+CGG - chr6_1:90030364-90030383 None:intergenic 35.0%
TTTGGCTGTACAACTTTCTT+TGG + chr6_1:90030821-90030840 Msa0897660:intron 35.0%
! ATACAAATACGTTAGTGGGT+TGG - chr6_1:90030865-90030884 None:intergenic 35.0%
GCACAATACAAATACGTTAG+TGG - chr6_1:90030870-90030889 None:intergenic 35.0%
GAAGACAACAATGAACTAAG+AGG + chr6_1:90031176-90031195 Msa0897660:intron 35.0%
TGCAACCATTGTCAACTAAT+TGG + chr6_1:90031288-90031307 Msa0897660:intron 35.0%
CTAATTGGCCAACTGAAATA+AGG + chr6_1:90031303-90031322 Msa0897660:intron 35.0%
! ACCAGTAACCTTATTTCAGT+TGG - chr6_1:90031314-90031333 None:intergenic 35.0%
! AATAAGGTTACTGGTTAGAC+CGG + chr6_1:90031319-90031338 Msa0897660:intron 35.0%
AGTTTACCTATCACAGCAAT+CGG - chr6_1:90031383-90031402 None:intergenic 35.0%
!!! TCTCCTTGGTATTTTAACTC+CGG - chr6_1:90031497-90031516 None:intergenic 35.0%
!! TTTTCTGCTTTAGGTCTTTC+AGG - chr6_1:90031539-90031558 None:intergenic 35.0%
TGAAAGACCTAAAGCAGAAA+AGG + chr6_1:90031538-90031557 Msa0897660:intron 35.0%
AACAACTGAAGTAGAAGAAC+CGG + chr6_1:90031631-90031650 Msa0897660:intron 35.0%
! AAAGCTGTTGCATTTTTCCT+TGG + chr6_1:90031671-90031690 Msa0897660:intron 35.0%
!!! TGCAAACCTTTTTAGGACAA+TGG + chr6_1:90031744-90031763 Msa0897660:intron 35.0%
!!! GCAAACCTTTTTAGGACAAT+GGG + chr6_1:90031745-90031764 Msa0897660:intron 35.0%
!! TGTTTCTGCTGCAAAGATTT+TGG - chr6_1:90031782-90031801 None:intergenic 35.0%
ATTAAGACATTCATCCAAGG+AGG + chr6_1:90031928-90031947 Msa0897660:intron 35.0%
TTAAGACATTCATCCAAGGA+GGG + chr6_1:90031929-90031948 Msa0897660:intron 35.0%
!! AAGAAATTGGTCTCGTTTTG+TGG + chr6_1:90032012-90032031 Msa0897660:intron 35.0%
AATCTTTGGGCTGAATATAC+CGG - chr6_1:90032097-90032116 None:intergenic 35.0%
CTGAGATTGAGGACAATATT+AGG + chr6_1:90032265-90032284 Msa0897660:intron 35.0%
TAACAAAACAACTCACAAGG+AGG - chr6_1:90032353-90032372 None:intergenic 35.0%
!! TCCTTGTGAGTTGTTTTGTT+AGG + chr6_1:90032352-90032371 Msa0897660:intron 35.0%
TCCTAACAAAACAACTCACA+AGG - chr6_1:90032356-90032375 None:intergenic 35.0%
CAGTTAGAGATCTTTGTCAA+AGG - chr6_1:90032418-90032437 None:intergenic 35.0%
CTTTGACAAAGATCTCTAAC+TGG + chr6_1:90032416-90032435 Msa0897660:intron 35.0%
TGGAAAGAACTATTCCACAT+GGG - chr6_1:90032446-90032465 None:intergenic 35.0%
ATGGAAAGAACTATTCCACA+TGG - chr6_1:90032447-90032466 None:intergenic 35.0%
CTGGAAAAAAAATCACAGCA+GGG + chr6_1:90032517-90032536 Msa0897660:intron 35.0%
TGGAAAAAAAATCACAGCAG+GGG + chr6_1:90032518-90032537 Msa0897660:intron 35.0%
CTAGAGAAACTAGGAAATCA+AGG + chr6_1:90032558-90032577 Msa0897660:intron 35.0%
AAGGGAACAAAAGAAACTGT+TGG + chr6_1:90032628-90032647 Msa0897660:intron 35.0%
TGTAACTGTTATCTACAGCT+AGG + chr6_1:90032753-90032772 Msa0897660:intron 35.0%
TGTCGGTATGGACAATAAAA+GGG - chr6_1:90033069-90033088 None:intergenic 35.0%
TTGTCGGTATGGACAATAAA+AGG - chr6_1:90033070-90033089 None:intergenic 35.0%
! TTATGGTGGAGTATCATTGT+CGG - chr6_1:90033086-90033105 None:intergenic 35.0%
GTGAAGTATACTCTTTATGG+TGG - chr6_1:90029626-90029645 None:intergenic 35.0%
TTTCGACGTGAAGAAATTCT+TGG - chr6_1:90033139-90033158 None:intergenic 35.0%
GAAACCTTGCTGAAAGATTA+TGG + chr6_1:90033155-90033174 Msa0897660:intron 35.0%
AAAGGACAAGTTATTGCTAG+CGG - chr6_1:90029808-90029827 None:intergenic 35.0%
!! TGTCCTTTTTCATGGTATAG+CGG + chr6_1:90029820-90029839 Msa0897660:intron 35.0%
TTTCCGCTATACCATGAAAA+AGG - chr6_1:90029826-90029845 None:intergenic 35.0%
! TAGTAATGTCTCCCTTGTTT+CGG - chr6_1:90029895-90029914 None:intergenic 35.0%
! AGTTTCTGAAAAAGACTCTG+AGG - chr6_1:90033400-90033419 None:intergenic 35.0%
TTAAAGAGAAATTGTCCAGG+GGG - chr6_1:90029951-90029970 None:intergenic 35.0%
!! ATTGTGAAGGTGTTGAAGAA+GGG - chr6_1:90030124-90030143 None:intergenic 35.0%
!! TATTGTGAAGGTGTTGAAGA+AGG - chr6_1:90030125-90030144 None:intergenic 35.0%
CACAACACAAGAATATAACG+TGG + chr6_1:90028764-90028783 Msa0897660:intron 35.0%
TTTGGCTGTACAACTTTCTT+TGG + chr6_1:90030821-90030840 Msa0897660:intron 35.0%
TGTTCTGATCTACTTCTTGT+TGG - chr6_1:90034358-90034377 None:intergenic 35.0%
AGACTGAAGACATACATTCA+AGG + chr6_1:90034480-90034499 Msa0897660:intron 35.0%
CATAGGACAAATACGATAGA+AGG + chr6_1:90034506-90034525 Msa0897660:intron 35.0%
!! ATAGAAGGCCCATTTGTTAT+AGG + chr6_1:90034521-90034540 Msa0897660:intron 35.0%
GTTCTTACAAATTGCCTATG+TGG + chr6_1:90034666-90034685 Msa0897660:intron 35.0%
! TTGTTAGTTTCACTCCACAT+AGG - chr6_1:90034683-90034702 None:intergenic 35.0%
CATATGACCATTAATTGGGA+TGG - chr6_1:90034916-90034935 None:intergenic 35.0%
TATGAGTCAGGTATTTGTGT+TGG + chr6_1:90034932-90034951 Msa0897660:intron 35.0%
CCTACAAACACAAATAATGG+AGG - chr6_1:90035056-90035075 None:intergenic 35.0%
CCTCCATTATTTGTGTTTGT+AGG + chr6_1:90035053-90035072 Msa0897660:intron 35.0%
CCTTGAATATGTTCAAGTCT+GGG + chr6_1:90035137-90035156 Msa0897660:CDS 35.0%
CTTGAATATGTTCAAGTCTG+GGG + chr6_1:90035138-90035157 Msa0897660:CDS 35.0%
TTAATCACCATATCTACTGC+TGG - chr6_1:90035214-90035233 None:intergenic 35.0%
!! CAACTTACTTTGGAGTTTGT+AGG - chr6_1:90035247-90035266 None:intergenic 35.0%
TTGCACAACACAACTTACTT+TGG - chr6_1:90035257-90035276 None:intergenic 35.0%
TATGGCTTGAATTGTGGTAT+GGG - chr6_1:90035522-90035541 None:intergenic 35.0%
ATATGGCTTGAATTGTGGTA+TGG - chr6_1:90035523-90035542 None:intergenic 35.0%
GTGATATATGGCTTGAATTG+TGG - chr6_1:90035528-90035547 None:intergenic 35.0%
ACAACTTAGGATTACCAACA+TGG + chr6_1:90035551-90035570 Msa0897660:intron 35.0%
GTGTAGAAAATGAAGGAATC+CGG + chr6_1:90035658-90035677 Msa0897660:intron 35.0%
TAAACACAACTGCACAACCT+TGG - chr6_1:90027572-90027591 None:intergenic 40.0%
! GCTGTTGAATGAGGATTTTG+AGG + chr6_1:90027748-90027767 Msa0897660:CDS 40.0%
TTCTGCTACGATGACAAAGA+AGG + chr6_1:90027826-90027845 Msa0897660:CDS 40.0%
! AGCTCCTAAGGGTTTGTTTA+AGG + chr6_1:90028190-90028209 Msa0897660:CDS 40.0%
TATTATGGCTGTACCTTCAC+AGG - chr6_1:90028219-90028238 None:intergenic 40.0%
ATACTTTCATCTCTTAGGGG+AGG + chr6_1:90028236-90028255 Msa0897660:intron 40.0%
TACTTTCATCTCTTAGGGGA+GGG + chr6_1:90028237-90028256 Msa0897660:intron 40.0%
TCTTCATTGGAAAAGAGCTG+TGG + chr6_1:90028301-90028320 Msa0897660:intron 40.0%
CTTCTTGCCAGCAAAACATA+AGG + chr6_1:90028422-90028441 Msa0897660:CDS 40.0%
TTCCCTCAACAAGAGTAGTA+TGG - chr6_1:90028542-90028561 None:intergenic 40.0%
TAACGTGGAAACTCCAAAAC+CGG + chr6_1:90028779-90028798 Msa0897660:intron 40.0%
!! CTAGTTGTCGGTTTAGACAA+CGG - chr6_1:90028819-90028838 None:intergenic 40.0%
GTTGTCTAAACCGACAACTA+GGG + chr6_1:90028818-90028837 Msa0897660:intron 40.0%
TAGAATAGGAGTGAGTCTCA+CGG - chr6_1:90028920-90028939 None:intergenic 40.0%
GTGGGAAAAATACATTGGGT+GGG - chr6_1:90028984-90029003 None:intergenic 40.0%
TGTGGGAAAAATACATTGGG+TGG - chr6_1:90028985-90029004 None:intergenic 40.0%
! TGTATTTTTCCCACACTCTC+TGG + chr6_1:90028990-90029009 Msa0897660:intron 40.0%
ACATGTACAACACCGAAAGA+AGG + chr6_1:90029178-90029197 Msa0897660:intron 40.0%
TACAACACCGAAAGAAGGAA+AGG + chr6_1:90029183-90029202 Msa0897660:intron 40.0%
GAACTTGCCTTTCCTTCTTT+CGG - chr6_1:90029193-90029212 None:intergenic 40.0%
GTTGTACAACTTTCTTTGGC+TGG + chr6_1:90029292-90029311 Msa0897660:intron 40.0%
TCGCAAGTAAATGAATTGCG+AGG - chr6_1:90029389-90029408 None:intergenic 40.0%
!! CAAAATTGTGCCGAGTTGAT+CGG - chr6_1:90029418-90029437 None:intergenic 40.0%
GGTACAAGTATATGTGTGTG+TGG - chr6_1:90029454-90029473 None:intergenic 40.0%
TCGGTATGGACAATAAAAGG+GGG - chr6_1:90029593-90029612 None:intergenic 40.0%
GTGGAGTATGATTATCGGTA+TGG - chr6_1:90029607-90029626 None:intergenic 40.0%
! GGTATAGCGGAAATACCATA+AGG + chr6_1:90029833-90029852 Msa0897660:intron 40.0%
! AGTAATGTCTCCCTTGTTTC+GGG - chr6_1:90029894-90029913 None:intergenic 40.0%
TACACAAGTGTGGAATGTCT+GGG - chr6_1:90029977-90029996 None:intergenic 40.0%
TTACACAAGTGTGGAATGTC+TGG - chr6_1:90029978-90029997 None:intergenic 40.0%
CAATCAGGATTACACAAGTG+TGG - chr6_1:90029987-90030006 None:intergenic 40.0%
AAGTACAAGTCAAGGATGTG+CGG - chr6_1:90030013-90030032 None:intergenic 40.0%
! CTTGTGGAAAGTACAAGTCA+AGG - chr6_1:90030021-90030040 None:intergenic 40.0%
!! ACAGAATCAACTTTGGCTTG+TGG - chr6_1:90030037-90030056 None:intergenic 40.0%
TAACGTGGAAACTCCAAAAC+CGG + chr6_1:90028779-90028798 Msa0897660:intron 40.0%
GAGTGTGGGAAAAATACACT+GGG - chr6_1:90030521-90030540 None:intergenic 40.0%
AGAGTGTGGGAAAAATACAC+TGG - chr6_1:90030522-90030541 None:intergenic 40.0%
! TGTATTTTTCCCACACTCTC+TGG + chr6_1:90028990-90029009 Msa0897660:intron 40.0%
! TGAGTAAATCCAGAGAGTGT+GGG - chr6_1:90030535-90030554 None:intergenic 40.0%
TTGAGTAAATCCAGAGAGTG+TGG - chr6_1:90030536-90030555 None:intergenic 40.0%
ACATGTACATCACCGAAAGA+AGG + chr6_1:90030711-90030730 Msa0897660:intron 40.0%
TACATCACCGAAAGAAGGAA+AGG + chr6_1:90030716-90030735 Msa0897660:intron 40.0%
GAACTTGCCTTTCCTTCTTT+CGG - chr6_1:90029193-90029212 None:intergenic 40.0%
GCTGTACAACTTTCTTTGGA+TGG + chr6_1:90030825-90030844 Msa0897660:intron 40.0%
CAATTATGGCATAAGCGTCT+TGG - chr6_1:90031107-90031126 None:intergenic 40.0%
CAAGACGCTTATGCCATAAT+TGG + chr6_1:90031105-90031124 Msa0897660:intron 40.0%
GGAAAAAGACGTCCAACTTT+AGG + chr6_1:90031197-90031216 Msa0897660:intron 40.0%
TTGTGCAGGATTAACACTCA+GGG - chr6_1:90031241-90031260 None:intergenic 40.0%
TTTGTGCAGGATTAACACTC+AGG - chr6_1:90031242-90031261 None:intergenic 40.0%
GTTGGCCAATTAGTTGACAA+TGG - chr6_1:90031296-90031315 None:intergenic 40.0%
GCCAACTGAAATAAGGTTAC+TGG + chr6_1:90031310-90031329 Msa0897660:intron 40.0%
! ATAAGGTTACTGGTTAGACC+GGG + chr6_1:90031320-90031339 Msa0897660:intron 40.0%
ACTGATGCTTATGTTTCTCC+CGG - chr6_1:90031341-90031360 None:intergenic 40.0%
ATAAGCATCAGTGAGAGATG+AGG + chr6_1:90031349-90031368 Msa0897660:intron 40.0%
! ATATCACCGATTGCTGTGAT+AGG + chr6_1:90031374-90031393 Msa0897660:intron 40.0%
!!! TCCTTGGTATTTTAACTCCG+GGG - chr6_1:90031495-90031514 None:intergenic 40.0%
!!! CTCCTTGGTATTTTAACTCC+GGG - chr6_1:90031496-90031515 None:intergenic 40.0%
!! CTTTTTCACCTAGTTCTCCT+TGG - chr6_1:90031511-90031530 None:intergenic 40.0%
! GTTTCAGCCTTTTCTGCTTT+AGG - chr6_1:90031548-90031567 None:intergenic 40.0%
! TGAACCATTTCAGGTGTCAT+TGG + chr6_1:90031578-90031597 Msa0897660:intron 40.0%
!! GGTGTCATTGGCACAAAATT+AGG + chr6_1:90031590-90031609 Msa0897660:intron 40.0%
! TTCTACTTCAGTTGTTTCCG+AGG - chr6_1:90031627-90031646 None:intergenic 40.0%
! CAGTAGCTGCAAACCTTTTT+AGG + chr6_1:90031737-90031756 Msa0897660:intron 40.0%
TGCTTCCCATTGTCCTAAAA+AGG - chr6_1:90031753-90031772 None:intergenic 40.0%
AGCAGATTTCTGTTGATCCA+TGG + chr6_1:90031865-90031884 Msa0897660:intron 40.0%
TAAGACATTCATCCAAGGAG+GGG + chr6_1:90031930-90031949 Msa0897660:intron 40.0%
!!! GATCTGATTTTGAGGGCATT+CGG - chr6_1:90031982-90032001 None:intergenic 40.0%
TTGTGGTCTCATGAACTGTT+TGG + chr6_1:90032029-90032048 Msa0897660:intron 40.0%
CAAGTTATGGCATGGATCAT+AGG - chr6_1:90032301-90032320 None:intergenic 40.0%
AAGATGCACAAGTTATGGCA+TGG - chr6_1:90032309-90032328 None:intergenic 40.0%
GGTCAAAGATGCACAAGTTA+TGG - chr6_1:90032314-90032333 None:intergenic 40.0%
!! TGAGTTGTTTTGTTAGGAGC+AGG + chr6_1:90032358-90032377 Msa0897660:intron 40.0%
!! GAGTTGTTTTGTTAGGAGCA+GGG + chr6_1:90032359-90032378 Msa0897660:intron 40.0%
AGAGATCTTTGTCAAAGGCA+AGG - chr6_1:90032413-90032432 None:intergenic 40.0%
GCTGGAAAAAAAATCACAGC+AGG + chr6_1:90032516-90032535 Msa0897660:intron 40.0%
TCAGAGAAAGACACGAAACT+AGG + chr6_1:90032601-90032620 Msa0897660:intron 40.0%
AGACACGAAACTAGGAACAA+AGG + chr6_1:90032609-90032628 Msa0897660:intron 40.0%
GACACGAAACTAGGAACAAA+GGG + chr6_1:90032610-90032629 Msa0897660:intron 40.0%
! AAAACTACGATCCCTTTTGC+TGG + chr6_1:90032698-90032717 Msa0897660:intron 40.0%
TAAAGTCTGTGCAAATCTGC+TGG + chr6_1:90032847-90032866 Msa0897660:intron 40.0%
!! CTGATTTGGTGCAGATTTGT+TGG - chr6_1:90032881-90032900 None:intergenic 40.0%
TCGGTATGGACAATAAAAGG+GGG - chr6_1:90029593-90029612 None:intergenic 40.0%
GTCGGTATGGACAATAAAAG+GGG - chr6_1:90033068-90033087 None:intergenic 40.0%
TGCACCATAATCTTTCAGCA+AGG - chr6_1:90033162-90033181 None:intergenic 40.0%
AACTTCCTAGAAGCCAACAT+GGG - chr6_1:90033188-90033207 None:intergenic 40.0%
! GGTATAGCGGAAATACCATA+AGG + chr6_1:90029833-90029852 Msa0897660:intron 40.0%
! AGTAATGTCTCCCTTGTTTC+GGG - chr6_1:90029894-90029913 None:intergenic 40.0%
TACACAAGTGTGGAATGTCT+GGG - chr6_1:90029977-90029996 None:intergenic 40.0%
TTACACAAGTGTGGAATGTC+TGG - chr6_1:90029978-90029997 None:intergenic 40.0%
CAATCAGGATTACACAAGTG+TGG - chr6_1:90029987-90030006 None:intergenic 40.0%
AAGTACAAGTCAAGGATGTG+CGG - chr6_1:90030013-90030032 None:intergenic 40.0%
! CTTGTGGAAAGTACAAGTCA+AGG - chr6_1:90030021-90030040 None:intergenic 40.0%
!! ACAGAATCAACTTTGGCTTG+TGG - chr6_1:90030037-90030056 None:intergenic 40.0%
TAACGTGGAAACTCCAAAAC+CGG + chr6_1:90028779-90028798 Msa0897660:intron 40.0%
!! CTGGTTGTCGATTTAGACAA+CGG - chr6_1:90033824-90033843 None:intergenic 40.0%
GTTGTCTAAATCGACAACCA+GGG + chr6_1:90033823-90033842 Msa0897660:intron 40.0%
TAGAATAGGAGTGGATCTCA+CGG - chr6_1:90033925-90033944 None:intergenic 40.0%
GAGTGTGGGAAAAATACACT+GGG - chr6_1:90030521-90030540 None:intergenic 40.0%
AGAGTGTGGGAAAAATACAC+TGG - chr6_1:90030522-90030541 None:intergenic 40.0%
! TGTATTTTTCCCACACTCTC+TGG + chr6_1:90028990-90029009 Msa0897660:intron 40.0%
! TGAGTAAATCCAGAGAGTGT+GGG - chr6_1:90030535-90030554 None:intergenic 40.0%
TTGAGTAAATCCAGAGAGTG+TGG - chr6_1:90030536-90030555 None:intergenic 40.0%
GAACTTGCCTTTCCTTCTTT+CGG - chr6_1:90029193-90029212 None:intergenic 40.0%
! AAAGTAGTACCCTTTGGCTT+AGG + chr6_1:90034386-90034405 Msa0897660:intron 40.0%
CTTAGATAGCCTAAGCCAAA+GGG - chr6_1:90034398-90034417 None:intergenic 40.0%
ACTTAGATAGCCTAAGCCAA+AGG - chr6_1:90034399-90034418 None:intergenic 40.0%
CAATTGCTTGCTTCTTTCCT+AGG + chr6_1:90034773-90034792 Msa0897660:intron 40.0%
GTATACAAGGTAGCAATCCT+AGG - chr6_1:90034793-90034812 None:intergenic 40.0%
TACATTCTCACTGAAATGGC+TGG + chr6_1:90034810-90034829 Msa0897660:CDS 40.0%
! AATGGCTGGAAGTACATCAA+TGG + chr6_1:90034824-90034843 Msa0897660:CDS 40.0%
GTACATCAATGGTGTTCACT+CGG + chr6_1:90034835-90034854 Msa0897660:CDS 40.0%
TGAGAATCAAAGCAAGAAGC+CGG - chr6_1:90034875-90034894 None:intergenic 40.0%
GCTTTGATTCTCAGGAATCT+CGG + chr6_1:90034882-90034901 Msa0897660:CDS 40.0%
! TTCCTTTTCTCTTTCCTTGC+TGG + chr6_1:90034990-90035009 Msa0897660:intron 40.0%
TTCCAGCAAGGAAAGAGAAA+AGG - chr6_1:90034995-90035014 None:intergenic 40.0%
GGAAGTCATGCTATTGTAGA+TGG + chr6_1:90035011-90035030 Msa0897660:intron 40.0%
! TTTTAACAGCCAAAGCGACT+TGG + chr6_1:90035112-90035131 Msa0897660:intron 40.0%
GCCTTGAATATGTTCAAGTC+TGG + chr6_1:90035136-90035155 Msa0897660:CDS 40.0%
CCCAGACTTGAACATATTCA+AGG - chr6_1:90035140-90035159 None:intergenic 40.0%
TACTAGCTACGTCAGTACAA+AGG - chr6_1:90035177-90035196 None:intergenic 40.0%
! TTTGTACTGACGTAGCTAGT+AGG + chr6_1:90035176-90035195 Msa0897660:CDS 40.0%
! TTGTACTGACGTAGCTAGTA+GGG + chr6_1:90035177-90035196 Msa0897660:CDS 40.0%
GGATATTCCAGCAGTAGATA+TGG + chr6_1:90035204-90035223 Msa0897660:CDS 40.0%
ATGGCTTGAATTGTGGTATG+GGG - chr6_1:90035521-90035540 None:intergenic 40.0%
TAGAAAATGAAGGAATCCGG+AGG + chr6_1:90035661-90035680 Msa0897660:intron 40.0%
AGAAAATGAAGGAATCCGGA+GGG + chr6_1:90035662-90035681 Msa0897660:intron 40.0%
GATTTCTCTTCCTTCTGAGC+AGG + chr6_1:90027706-90027725 Msa0897660:intron 45.0%
GCTAATGCCAAGGGAGAAAA+GGG - chr6_1:90027902-90027921 None:intergenic 45.0%
TAAAACATGTATCAGGGCCC+TGG + chr6_1:90028600-90028619 Msa0897660:intron 45.0%
CTATGCCCTCGTTTAAACCA+GGG - chr6_1:90028620-90028639 None:intergenic 45.0%
ACTATGCCCTCGTTTAAACC+AGG - chr6_1:90028621-90028640 None:intergenic 45.0%
!!! CGTGGTTTTTTCTCCGGTTT+TGG - chr6_1:90028795-90028814 None:intergenic 45.0%
!!! AACGGTCGTGGTTTTTTCTC+CGG - chr6_1:90028801-90028820 None:intergenic 45.0%
CGTTGTCTAAACCGACAACT+AGG + chr6_1:90028817-90028836 Msa0897660:intron 45.0%
AGAATAGGAGTGAGTCTCAC+GGG - chr6_1:90028919-90028938 None:intergenic 45.0%
! TGGGTAAATCCAGAGAGTGT+GGG - chr6_1:90029002-90029021 None:intergenic 45.0%
TTGGGTAAATCCAGAGAGTG+TGG - chr6_1:90029003-90029022 None:intergenic 45.0%
TGTGTGTAGTAGTGTGTGAG+AGG - chr6_1:90029038-90029057 None:intergenic 45.0%
TTGAGGGAAAGCAGAACACA+CGG - chr6_1:90029101-90029120 None:intergenic 45.0%
TAAAAGGGGGAGCAGAAAAG+TGG - chr6_1:90029580-90029599 None:intergenic 45.0%
TGCACCATAGTCTTTCAGCA+AGG - chr6_1:90029688-90029707 None:intergenic 45.0%
TGTGTGGTGAGATATGTCGA+TGG - chr6_1:90029743-90029762 None:intergenic 45.0%
!! CATTGGTTGGCATTGATGCA+GGG - chr6_1:90029766-90029785 None:intergenic 45.0%
! AGCGGATTCAGAACAACACA+CGG - chr6_1:90029790-90029809 None:intergenic 45.0%
ACCATCATCTCCCGAAACAA+GGG + chr6_1:90029881-90029900 Msa0897660:intron 45.0%
! TTTTCAAAAACTGCTCCCCC+TGG + chr6_1:90029933-90029952 Msa0897660:intron 45.0%
AAGGATGTGCGGATACAATC+AGG - chr6_1:90030002-90030021 None:intergenic 45.0%
CAACAGTGGTATCAGAGCTT+CGG - chr6_1:90030234-90030253 None:intergenic 45.0%
! GAAGCTCTGATACCACTGTT+GGG + chr6_1:90030233-90030252 Msa0897660:intron 45.0%
!!! CGTGGTTTTTTCTCCGGTTT+TGG - chr6_1:90028795-90028814 None:intergenic 45.0%
!!! AACGGTCGTGGTTTTTTCTC+CGG - chr6_1:90028801-90028820 None:intergenic 45.0%
!! CTGGTTGTCGGTTTAGACAA+CGG - chr6_1:90030352-90030371 None:intergenic 45.0%
GTTGTCTAAACCGACAACCA+GGG + chr6_1:90030351-90030370 Msa0897660:intron 45.0%
GTGGGAAAAATACACTGGGT+GGG - chr6_1:90030517-90030536 None:intergenic 45.0%
TGTGGGAAAAATACACTGGG+TGG - chr6_1:90030518-90030537 None:intergenic 45.0%
TGTGTGTAGTAGTGTGTGAG+AGG - chr6_1:90029038-90029057 None:intergenic 45.0%
TTGAGGGAAAGCAGAACACA+CGG - chr6_1:90029101-90029120 None:intergenic 45.0%
!! CAAATACGTTAGTGGGTTGG+TGG - chr6_1:90030862-90030881 None:intergenic 45.0%
GGTCATATGATTAGATGCCC+CGG + chr6_1:90031475-90031494 Msa0897660:intron 45.0%
TGTGCCAATGACACCTGAAA+TGG - chr6_1:90031585-90031604 None:intergenic 45.0%
! GCTGTTGCATTTTTCCTTGG+TGG + chr6_1:90031674-90031693 Msa0897660:intron 45.0%
!! TTTTTCCTTGGTGGCCTGAT+TGG + chr6_1:90031683-90031702 Msa0897660:intron 45.0%
TGCAGCTACTGCAAACAAGA+AGG - chr6_1:90031728-90031747 None:intergenic 45.0%
TGCATCTTTGACCTCCCATT+TGG + chr6_1:90032321-90032340 Msa0897660:intron 45.0%
TGTCAAAGGCAAGGAGCTTT+GGG - chr6_1:90032404-90032423 None:intergenic 45.0%
TTGTCAAAGGCAAGGAGCTT+TGG - chr6_1:90032405-90032424 None:intergenic 45.0%
CTTGTCTGTAGTCGTAGACA+TGG + chr6_1:90032492-90032511 Msa0897660:intron 45.0%
! GTGGAGTATCATTGTCGGTA+TGG - chr6_1:90033081-90033100 None:intergenic 45.0%
GAACTTCCTAGAAGCCAACA+TGG - chr6_1:90033189-90033208 None:intergenic 45.0%
TGTGTGGTGAGATATGTCGA+TGG - chr6_1:90029743-90029762 None:intergenic 45.0%
!! CATTGGTTGGCATTGATGCA+GGG - chr6_1:90029766-90029785 None:intergenic 45.0%
AGCGGTTTCAGAACAACACA+CGG - chr6_1:90033264-90033283 None:intergenic 45.0%
ACCATCATCTCCCGAAACAA+GGG + chr6_1:90029881-90029900 Msa0897660:intron 45.0%
AAGGATGTGCGGATACAATC+AGG - chr6_1:90030002-90030021 None:intergenic 45.0%
CAACAGTGGTATCAGAGCTT+CGG - chr6_1:90030234-90030253 None:intergenic 45.0%
! GAAGCTCTGATACCACTGTT+GGG + chr6_1:90030233-90030252 Msa0897660:intron 45.0%
TACCACTGTTGGGCAATAAC+AGG + chr6_1:90030243-90030262 Msa0897660:intron 45.0%
!!! CGTGGTTTTTTCTCCGGTTT+TGG - chr6_1:90028795-90028814 None:intergenic 45.0%
!!! AACGGTCGTGGTTTTTTCTC+CGG - chr6_1:90028801-90028820 None:intergenic 45.0%
CGTTGTCTAAATCGACAACC+AGG + chr6_1:90033822-90033841 Msa0897660:intron 45.0%
AGAATAGGAGTGGATCTCAC+GGG - chr6_1:90033924-90033943 None:intergenic 45.0%
GTGGGAAAAATACACTGGGT+GGG - chr6_1:90030517-90030536 None:intergenic 45.0%
TGTGGGAAAAATACACTGGG+TGG - chr6_1:90030518-90030537 None:intergenic 45.0%
TGTGTGTAGTAGTGTGTGAG+AGG - chr6_1:90029038-90029057 None:intergenic 45.0%
TTGAGGGAAAGCAGAACACA+CGG - chr6_1:90029101-90029120 None:intergenic 45.0%
! ACATGTACAGCACCGAAAGA+AGG + chr6_1:90034183-90034202 Msa0897660:intron 45.0%
! TACAGCACCGAAAGAAGGAA+AGG + chr6_1:90034188-90034207 Msa0897660:intron 45.0%
GCTGTACAACTTTCTTTGGC+TGG + chr6_1:90034297-90034316 Msa0897660:intron 45.0%
GAGAATCAAAGCAAGAAGCC+GGG - chr6_1:90034874-90034893 None:intergenic 45.0%
GGCTTCTTGCTTTGATTCTC+AGG + chr6_1:90034874-90034893 Msa0897660:CDS 45.0%
CAATAGCATGACTTCCAGCA+AGG - chr6_1:90035007-90035026 None:intergenic 45.0%
! TGTACTGACGTAGCTAGTAG+GGG + chr6_1:90035178-90035197 Msa0897660:CDS 45.0%
!!! TTTTAAAAAAAAAAATTATG+TGG - chr6_1:90028585-90028604 None:intergenic 5.0%
!!! TACATATATTTTATTTATTT+TGG + chr6_1:90028678-90028697 Msa0897660:intron 5.0%
! TCGTCTAAGACCTGCTCAGA+AGG - chr6_1:90027719-90027738 None:intergenic 50.0%
TTCTGAGCAGGTCTTAGACG+AGG + chr6_1:90027718-90027737 Msa0897660:intron 50.0%
GGCTAATGCCAAGGGAGAAA+AGG - chr6_1:90027903-90027922 None:intergenic 50.0%
TTTCTCCCTTGGCATTAGCC+AGG + chr6_1:90027903-90027922 Msa0897660:intron 50.0%
AGATGCCTGGCTAATGCCAA+GGG - chr6_1:90027911-90027930 None:intergenic 50.0%
AAGATGCCTGGCTAATGCCA+AGG - chr6_1:90027912-90027931 None:intergenic 50.0%
TTCAGGTCGAGAAGCTCCTA+AGG + chr6_1:90028178-90028197 Msa0897660:intron 50.0%
TCAGGTCGAGAAGCTCCTAA+GGG + chr6_1:90028179-90028198 Msa0897660:intron 50.0%
! CGTGTCGACCGTAGAATACT+TGG - chr6_1:90028385-90028404 None:intergenic 50.0%
TGTTGGACCCACACGTTAGT+GGG - chr6_1:90029336-90029355 None:intergenic 50.0%
TTGTTGGACCCACACGTTAG+TGG - chr6_1:90029337-90029356 None:intergenic 50.0%
ATGAACTCCCTTTGGCTGGA+GGG - chr6_1:90029366-90029385 None:intergenic 50.0%
TTGCGAGGATGAACTCCCTT+TGG - chr6_1:90029374-90029393 None:intergenic 50.0%
TCGAAAGTCCTCCTGACGAA+GGG - chr6_1:90029514-90029533 None:intergenic 50.0%
CTATGGTGCAACTCCCATGT+TGG + chr6_1:90029698-90029717 Msa0897660:intron 50.0%
AACTTCCGGGAAGCCAACAT+GGG - chr6_1:90029714-90029733 None:intergenic 50.0%
TCGATGGCTGAAGAACTTCC+GGG - chr6_1:90029727-90029746 None:intergenic 50.0%
GTCGATGGCTGAAGAACTTC+CGG - chr6_1:90029728-90029747 None:intergenic 50.0%
!! GCATTGGTTGGCATTGATGC+AGG - chr6_1:90029767-90029786 None:intergenic 50.0%
!! AACAACACACGGGCATTGGT+TGG - chr6_1:90029779-90029798 None:intergenic 50.0%
TCAGAACAACACACGGGCAT+TGG - chr6_1:90029783-90029802 None:intergenic 50.0%
GCGGATTCAGAACAACACAC+GGG - chr6_1:90029789-90029808 None:intergenic 50.0%
CACCATCATCTCCCGAAACA+AGG + chr6_1:90029880-90029899 Msa0897660:intron 50.0%
! TCCCTTGTTTCGGGAGATGA+TGG - chr6_1:90029885-90029904 None:intergenic 50.0%
!! GTGAAGGTGTTGAAGAAGGG+TGG - chr6_1:90030121-90030140 None:intergenic 50.0%
! CGAAGCTCTGATACCACTGT+TGG + chr6_1:90030232-90030251 Msa0897660:intron 50.0%
! GTGCTGTTATTGCCCAACAG+TGG - chr6_1:90030248-90030267 None:intergenic 50.0%
CGTTGTCTAAACCGACAACC+AGG + chr6_1:90030350-90030369 Msa0897660:intron 50.0%
AGAATAGGAGTGGGTCTCAC+AGG - chr6_1:90030452-90030471 None:intergenic 50.0%
TCAGGGAAGATGATCGCGAA+GGG - chr6_1:90031224-90031243 None:intergenic 50.0%
GCCCCGGAGTTAAAATACCA+AGG + chr6_1:90031491-90031510 Msa0897660:intron 50.0%
TGAAGTAGAAGAACCGGCAC+CGG + chr6_1:90031637-90031656 Msa0897660:intron 50.0%
AATGTCCAATCAGGCCACCA+AGG - chr6_1:90031691-90031710 None:intergenic 50.0%
TTACTCATGTCACGCCCTCT+AGG + chr6_1:90031809-90031828 Msa0897660:intron 50.0%
CTGCACAAGGAAGACCTAGA+GGG - chr6_1:90031826-90031845 None:intergenic 50.0%
GAAATCTGCTTCCCTTCCTG+TGG - chr6_1:90031855-90031874 None:intergenic 50.0%
GATCCATGGTTGTCTGAGTG+AGG + chr6_1:90031879-90031898 Msa0897660:intron 50.0%
TCTCCTCACTCAGACAACCA+TGG - chr6_1:90031885-90031904 None:intergenic 50.0%
ACCTGCGAGCACTATTGTTC+TGG + chr6_1:90032191-90032210 Msa0897660:intron 50.0%
! CAAGGAGGCACATGCCAAAT+GGG - chr6_1:90032338-90032357 None:intergenic 50.0%
! ACAAGGAGGCACATGCCAAA+TGG - chr6_1:90032339-90032358 None:intergenic 50.0%
!! GAGCTTTGGGGTCATGTTGA+CGG - chr6_1:90032391-90032410 None:intergenic 50.0%
GTCAAAGGCAAGGAGCTTTG+GGG - chr6_1:90032403-90032422 None:intergenic 50.0%
CTCTAACTGGAATGCCCATG+TGG + chr6_1:90032429-90032448 Msa0897660:intron 50.0%
TGTAGTCGTAGACATGGTGC+TGG + chr6_1:90032498-90032517 Msa0897660:intron 50.0%
TCGAAAGTCCTCCTGACGAA+GGG - chr6_1:90029514-90029533 None:intergenic 50.0%
!! GCATTGGTTGGCATTGATGC+AGG - chr6_1:90029767-90029786 None:intergenic 50.0%
!! AACAACACACGGGCATTGGT+TGG - chr6_1:90029779-90029798 None:intergenic 50.0%
TCAGAACAACACACGGGCAT+TGG - chr6_1:90029783-90029802 None:intergenic 50.0%
GCGGTTTCAGAACAACACAC+GGG - chr6_1:90033263-90033282 None:intergenic 50.0%
CACCATCATCTCCCGAAACA+AGG + chr6_1:90029880-90029899 Msa0897660:intron 50.0%
! TCCCTTGTTTCGGGAGATGA+TGG - chr6_1:90029885-90029904 None:intergenic 50.0%
! TTTTCAGAAACTGCTCCCCC+TGG + chr6_1:90033408-90033427 Msa0897660:intron 50.0%
!! GTGAAGGTGTTGAAGAAGGG+TGG - chr6_1:90030121-90030140 None:intergenic 50.0%
! CGAAGCTCTGATACCACTGT+TGG + chr6_1:90030232-90030251 Msa0897660:intron 50.0%
GTCCTGTTATTGCCCAACAG+TGG - chr6_1:90033720-90033739 None:intergenic 50.0%
! GTCGATTTAGACAACGGTCG+TGG - chr6_1:90033818-90033837 None:intergenic 50.0%
TGTTGGACCCACACGTTAGT+GGG - chr6_1:90029336-90029355 None:intergenic 50.0%
TTGTTGGACCCACACGTTAG+TGG - chr6_1:90029337-90029356 None:intergenic 50.0%
CTCGGACATGTGATTCAACC+CGG + chr6_1:90034853-90034872 Msa0897660:CDS 50.0%
TTCAAGGCTCCAAGTCGCTT+TGG - chr6_1:90035124-90035143 None:intergenic 50.0%
TTCAACCAGCTCATTGCGTG+AGG + chr6_1:90035491-90035510 Msa0897660:intron 50.0%
TCAACCAGCTCATTGCGTGA+GGG + chr6_1:90035492-90035511 Msa0897660:intron 50.0%
AGGAATCCGGAGGGAAGAAA+CGG + chr6_1:90035671-90035690 Msa0897660:CDS 50.0%
AGGTGATCCAAGACACGTCC+AGG - chr6_1:90026994-90027013 None:intergenic 55.0%
AGGTCTTAGACGAGGCAGAC+AGG + chr6_1:90027726-90027745 Msa0897660:intron 55.0%
GGCAGACAGGCTGTTGAATG+AGG + chr6_1:90027739-90027758 Msa0897660:CDS 55.0%
TCAGGGCCCTGGTTTAAACG+AGG + chr6_1:90028611-90028630 Msa0897660:intron 55.0%
CAGGGCCCTGGTTTAAACGA+GGG + chr6_1:90028612-90028631 Msa0897660:intron 55.0%
! GTCGGTTTAGACAACGGTCG+TGG - chr6_1:90028813-90028832 None:intergenic 55.0%
ACCACCAACCCACTAACGTG+TGG + chr6_1:90029325-90029344 Msa0897660:intron 55.0%
CCACCAACCCACTAACGTGT+GGG + chr6_1:90029326-90029345 Msa0897660:intron 55.0%
AATTCTCCCCCTCCAGCCAA+AGG + chr6_1:90029355-90029374 Msa0897660:intron 55.0%
ATTCTCCCCCTCCAGCCAAA+GGG + chr6_1:90029356-90029375 Msa0897660:intron 55.0%
TGAACTCCCTTTGGCTGGAG+GGG - chr6_1:90029365-90029384 None:intergenic 55.0%
GATGAACTCCCTTTGGCTGG+AGG - chr6_1:90029367-90029386 None:intergenic 55.0%
GAGGATGAACTCCCTTTGGC+TGG - chr6_1:90029370-90029389 None:intergenic 55.0%
GCGATCCATGCCGATCAACT+CGG + chr6_1:90029405-90029424 Msa0897660:intron 55.0%
!! TTGTGCCGAGTTGATCGGCA+TGG - chr6_1:90029413-90029432 None:intergenic 55.0%
ACCGCAGTTGCTGCACTCAA+CGG + chr6_1:90029471-90029490 Msa0897660:intron 55.0%
TCCGTTGAGTGCAGCAACTG+CGG - chr6_1:90029475-90029494 None:intergenic 55.0%
GTCGAAAGTCCTCCTGACGA+AGG - chr6_1:90029515-90029534 None:intergenic 55.0%
!! CAACTCCCATGTTGGCTTCC+CGG + chr6_1:90029706-90029725 Msa0897660:intron 55.0%
GAACTTCCGGGAAGCCAACA+TGG - chr6_1:90029715-90029734 None:intergenic 55.0%
!! TGGCATTGATGCAGGGTGTG+TGG - chr6_1:90029759-90029778 None:intergenic 55.0%
! GTCGGTTTAGACAACGGTCG+TGG - chr6_1:90028813-90028832 None:intergenic 55.0%
ATCGCGAAGGGGCCTAAAGT+TGG - chr6_1:90031212-90031231 None:intergenic 55.0%
CAGGGAAGATGATCGCGAAG+GGG - chr6_1:90031223-90031242 None:intergenic 55.0%
CTCAGGGAAGATGATCGCGA+AGG - chr6_1:90031225-90031244 None:intergenic 55.0%
ACAGCTTTCAGTGCCTCTGC+CGG - chr6_1:90031659-90031678 None:intergenic 55.0%
GCTGCACAAGGAAGACCTAG+AGG - chr6_1:90031827-90031846 None:intergenic 55.0%
TGCAGCATACGCCACAGGAA+GGG + chr6_1:90031841-90031860 Msa0897660:intron 55.0%
GCCAGAACAATAGTGCTCGC+AGG - chr6_1:90032195-90032214 None:intergenic 55.0%
TTCCCACATCTTAGCTGCCG+TGG + chr6_1:90032234-90032253 Msa0897660:intron 55.0%
ATCTTAGCTGCCGTGGCGAA+GGG + chr6_1:90032241-90032260 Msa0897660:intron 55.0%
CAATCTCAGACCCTTCGCCA+CGG - chr6_1:90032254-90032273 None:intergenic 55.0%
! TGGCGAAGGGTCTGAGATTG+AGG + chr6_1:90032254-90032273 Msa0897660:intron 55.0%
ACCTCCGTTGCTGCACTCAA+CGG + chr6_1:90032945-90032964 Msa0897660:intron 55.0%
GGTTCCGTTGAGTGCAGCAA+CGG - chr6_1:90029478-90029497 None:intergenic 55.0%
GTCGAAAGTCCTCCTGACGA+AGG - chr6_1:90029515-90029534 None:intergenic 55.0%
!! TGGCATTGATGCAGGGTGTG+TGG - chr6_1:90029759-90029778 None:intergenic 55.0%
ACCACCAACCCACTAACGTG+TGG + chr6_1:90029325-90029344 Msa0897660:intron 55.0%
CCACCAACCCACTAACGTGT+GGG + chr6_1:90029326-90029345 Msa0897660:intron 55.0%
TGACGTAGCTAGTAGGGGAC+TGG + chr6_1:90035183-90035202 Msa0897660:CDS 55.0%
AATCCGGAGGGAAGAAACGG+AGG + chr6_1:90035674-90035693 Msa0897660:CDS 55.0%
ATCCGGAGGGAAGAAACGGA+GGG + chr6_1:90035675-90035694 Msa0897660:CDS 55.0%
TGGGACTCCTGGACGTGTCT+TGG + chr6_1:90026984-90027003 Msa0897660:CDS 60.0%
TAGGAACGATCCCTCGCGAG+CGG + chr6_1:90027789-90027808 Msa0897660:CDS 60.0%
!! CCCACACGTTAGTGGGTTGG+TGG - chr6_1:90029329-90029348 None:intergenic 60.0%
! GGACCCACACGTTAGTGGGT+TGG - chr6_1:90029332-90029351 None:intergenic 60.0%
GGCTGGAGGGGGAGAATTGT+TGG - chr6_1:90029353-90029372 None:intergenic 60.0%
GAACTCCCTTTGGCTGGAGG+GGG - chr6_1:90029364-90029383 None:intergenic 60.0%
!! CCTGACGAAGGGTGTTCAGG+CGG - chr6_1:90029503-90029522 None:intergenic 60.0%
!! CCTCCTGACGAAGGGTGTTC+AGG - chr6_1:90029506-90029525 None:intergenic 60.0%
CCTGAACACCCTTCGTCAGG+AGG + chr6_1:90029503-90029522 Msa0897660:intron 60.0%
CCTGTGGCGTATGCTGCACA+AGG - chr6_1:90031839-90031858 None:intergenic 60.0%
CCTTGTGCAGCATACGCCAC+AGG + chr6_1:90031836-90031855 Msa0897660:intron 60.0%
GTGCAGCATACGCCACAGGA+AGG + chr6_1:90031840-90031859 Msa0897660:intron 60.0%
CAGAGCTACTGTCCCCTCCT+TGG - chr6_1:90031945-90031964 None:intergenic 60.0%
CGCCACGGCAGCTAAGATGT+GGG - chr6_1:90032239-90032258 None:intergenic 60.0%
TCGCCACGGCAGCTAAGATG+TGG - chr6_1:90032240-90032259 None:intergenic 60.0%
CATCTTAGCTGCCGTGGCGA+AGG + chr6_1:90032240-90032259 Msa0897660:intron 60.0%
! GGAGGCACATGCCAAATGGG+AGG - chr6_1:90032335-90032354 None:intergenic 60.0%
TCCGTTGAGTGCAGCAACGG+AGG - chr6_1:90032949-90032968 None:intergenic 60.0%
!! CCTGACGAAGGGTGTTCAGG+CGG - chr6_1:90029503-90029522 None:intergenic 60.0%
!! CCTCCTGACGAAGGGTGTTC+AGG - chr6_1:90029506-90029525 None:intergenic 60.0%
CCTGAACACCCTTCGTCAGG+AGG + chr6_1:90029503-90029522 Msa0897660:intron 60.0%
!! CCCACACGTTAGTGGGTTGG+TGG - chr6_1:90029329-90029348 None:intergenic 60.0%
! GGACCCACACGTTAGTGGGT+TGG - chr6_1:90029332-90029351 None:intergenic 60.0%
GCAACCCTCACGCAATGAGC+TGG - chr6_1:90035499-90035518 None:intergenic 60.0%
TCCGGAGGGAAGAAACGGAG+GGG + chr6_1:90035676-90035695 Msa0897660:CDS 60.0%
GGGCGAAGGAGATGTAGGAG+AGG + chr6_1:90035696-90035715 Msa0897660:CDS 60.0%
GGAATGTCCTCCGCTCGCGA+GGG - chr6_1:90027802-90027821 None:intergenic 65.0%
AGGAATGTCCTCCGCTCGCG+AGG - chr6_1:90027803-90027822 None:intergenic 65.0%
!! ACGAAGGGTGTTCAGGCGGC+GGG - chr6_1:90029499-90029518 None:intergenic 65.0%
!! GACGAAGGGTGTTCAGGCGG+CGG - chr6_1:90029500-90029519 None:intergenic 65.0%
CCGCCTGAACACCCTTCGTC+AGG + chr6_1:90029500-90029519 Msa0897660:intron 65.0%
!! AGAAGAACCGGCACCGGCAG+AGG + chr6_1:90031643-90031662 Msa0897660:intron 65.0%
TTCAGTGCCTCTGCCGGTGC+CGG - chr6_1:90031653-90031672 None:intergenic 65.0%
!! ACGAAGGGTGTTCAGGCGGC+GGG - chr6_1:90029499-90029518 None:intergenic 65.0%
!! GACGAAGGGTGTTCAGGCGG+CGG - chr6_1:90029500-90029519 None:intergenic 65.0%
CCGCCTGAACACCCTTCGTC+AGG + chr6_1:90029500-90029519 Msa0897660:intron 65.0%
GCCCCTCCGTTTCTTCCCTC+CGG - chr6_1:90035680-90035699 None:intergenic 65.0%
GGGAAGAAACGGAGGGGCGA+AGG + chr6_1:90035682-90035701 Msa0897660:CDS 65.0%
CGGAGGGGCGAAGGAGATGT+AGG + chr6_1:90035691-90035710 Msa0897660:CDS 65.0%
GAACGATCCCTCGCGAGCGG+AGG + chr6_1:90027792-90027811 Msa0897660:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 90026982 90035948 90026982 ID=Msa0897660;Name=Msa0897660
chr6_1 mRNA 90026982 90035948 90026982 ID=Msa0897660-mRNA-1;Parent=Msa0897660;Name=Msa0897660-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.5|0.42|1|0.83|0.85|7|165|238
chr6_1 exon 90026982 90027056 90026982 ID=Msa0897660-mRNA-1:exon:15320;Parent=Msa0897660-mRNA-1
chr6_1 exon 90027728 90027847 90027728 ID=Msa0897660-mRNA-1:exon:15321;Parent=Msa0897660-mRNA-1
chr6_1 exon 90028183 90028224 90028183 ID=Msa0897660-mRNA-1:exon:15322;Parent=Msa0897660-mRNA-1
chr6_1 exon 90028369 90028443 90028369 ID=Msa0897660-mRNA-1:exon:15323;Parent=Msa0897660-mRNA-1
chr6_1 exon 90034795 90034941 90034795 ID=Msa0897660-mRNA-1:exon:15324;Parent=Msa0897660-mRNA-1
chr6_1 exon 90035121 90035258 90035121 ID=Msa0897660-mRNA-1:exon:15325;Parent=Msa0897660-mRNA-1
chr6_1 exon 90035664 90035948 90035664 ID=Msa0897660-mRNA-1:exon:15326;Parent=Msa0897660-mRNA-1
chr6_1 CDS 90026982 90027056 90026982 ID=Msa0897660-mRNA-1:cds;Parent=Msa0897660-mRNA-1
chr6_1 CDS 90027728 90027847 90027728 ID=Msa0897660-mRNA-1:cds;Parent=Msa0897660-mRNA-1
chr6_1 CDS 90028183 90028224 90028183 ID=Msa0897660-mRNA-1:cds;Parent=Msa0897660-mRNA-1
chr6_1 CDS 90028369 90028443 90028369 ID=Msa0897660-mRNA-1:cds;Parent=Msa0897660-mRNA-1
chr6_1 CDS 90034795 90034941 90034795 ID=Msa0897660-mRNA-1:cds;Parent=Msa0897660-mRNA-1
chr6_1 CDS 90035121 90035258 90035121 ID=Msa0897660-mRNA-1:cds;Parent=Msa0897660-mRNA-1
chr6_1 CDS 90035664 90035783 90035664 ID=Msa0897660-mRNA-1:cds;Parent=Msa0897660-mRNA-1
chr6_1 three_prime_UTR 90035784 90035948 90035784 ID=Msa0897660-mRNA-1:three_prime_utr;Parent=Msa0897660-mRNA-1
Gene Sequence

>Msa0897660

GTTGGGACTCCTGGACGTGTCTTGGATCACCTAAAAAACACCAAAGGATTTTCTCTTGCTAGATTAAAATACTTGGTCTTAGACGAGGCAGACAGGCTGTTGAATGAGGATTTTGAGGAATCACTTAATGAGATTTTAGGAACGATCCCTCGCGAGCGGAGGACATTCCTTTTTTCTGCTACGATGACAAAGAAGGTCGAGAAGCTCCTAAGGGTTTGTTTAAGGAATCCTGTGAAGATCGAAACATCATCCAAGTATTCTACGGTCGACACGCTGAAGCAACAATATCGCTTCTTGCCAGCAAAACATAAGGATTGCTACCTTGTATACATTCTCACTGAAATGGCTGGAAGTACATCAATGGTGTTCACTCGGACATGTGATTCAACCCGGCTTCTTGCTTTGATTCTCAGGAATCTCGGTTTAAAAGCCATCCCAATTAATGGTCATATGAGTCAGCCAAAGCGACTTGGAGCCTTGAATATGTTCAAGTCTGGGGATTGCAATATTCTCCTTTGTACTGACGTAGCTAGTAGGGGACTGGATATTCCAGCAGTAGATATGGTGATTAACTATGATATTCCTACAAACTCCAAAAAAATGAAGGAATCCGGAGGGAAGAAACGGAGGGGCGAAGGAGATGTAGGAGAGGATGATGATGTTGACAAATACTTTGGTCTGAAAGACAGAAAATCGTCTAAGAAGTTTAGAAGATAA
Protein sequence

>Msa0897660

VGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGTIPRERRTFLFSATMTKKVEKLLRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNMFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKKMKESGGKKRRGEGDVGEDDDVDKYFGLKDRKSSKKFRR*