AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0856920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0856920 MtrunA17_Chr5g0435301 95.718 1121 31 1 1 1121 1 1104 0.0 2227
Msa0856920 MtrunA17_Chr3g0111661 64.409 635 209 5 489 1121 5 624 0.0 809
Msa0856920 MtrunA17_Chr3g0111661 60.194 103 40 1 246 348 2 103 1.65e-30 129
Msa0856920 MtrunA17_Chr3g0111661 48.322 149 62 5 117 256 1 143 5.65e-29 124
Msa0856920 MtrunA17_Chr3g0111661 58.095 105 41 2 367 471 2 103 4.79e-28 121
Msa0856920 MtrunA17_Chr3g0111661 48.120 133 62 4 1 132 1 127 4.55e-25 112
Msa0856920 MtrunA17_Chr4g0001231 41.680 619 324 12 507 1120 22 608 2.71e-137 431
Msa0856920 MtrunA17_Chr4g0001231 44.048 84 41 3 136 214 24 106 1.41e-13 75.1
Msa0856920 MtrunA17_Chr4g0001231 40.187 107 53 4 25 121 24 129 1.43e-13 75.1
Msa0856920 MtrunA17_Chr4g0001231 41.860 86 45 2 267 348 22 106 2.02e-13 74.7
Msa0856920 MtrunA17_Chr4g0001231 43.421 76 40 2 388 463 22 94 1.53e-11 68.6
Msa0856920 MtrunA17_Chr4g0074301 40.865 624 332 12 504 1120 19 612 4.42e-137 430
Msa0856920 MtrunA17_Chr4g0074301 41.837 98 51 3 131 223 19 115 2.83e-15 80.9
Msa0856920 MtrunA17_Chr4g0074301 37.008 127 68 4 20 135 19 144 5.82e-15 79.7
Msa0856920 MtrunA17_Chr4g0074301 40.698 86 46 2 264 345 19 103 4.79e-14 76.6
Msa0856920 MtrunA17_Chr4g0070931 40.705 624 333 10 504 1120 19 612 8.79e-136 427
Msa0856920 MtrunA17_Chr4g0070931 35.433 127 70 3 20 135 19 144 1.14e-14 79.0
Msa0856920 MtrunA17_Chr4g0070931 40.816 98 52 3 131 223 19 115 1.14e-14 79.0
Msa0856920 MtrunA17_Chr4g0070931 39.130 92 49 3 264 351 19 107 3.32e-13 73.9
Msa0856920 MtrunA17_Chr2g0328241 37.577 652 348 18 518 1127 32 666 1.55e-110 361
Msa0856920 MtrunA17_Chr2g0328251 36.889 675 337 18 518 1127 32 682 3.09e-110 360
Msa0856920 MtrunA17_Chr4g0024031 34.132 668 341 17 518 1127 32 658 4.82e-98 327
Msa0856920 MtrunA17_Chr2g0327251 35.273 550 281 11 597 1127 63 556 1.09e-87 295
Msa0856920 MtrunA17_Chr3g0111741 58.911 202 80 2 922 1121 123 323 1.26e-63 221
Msa0856920 MtrunA17_Chr4g0071151 46.269 268 111 5 895 1142 3 257 1.63e-63 216
Msa0856920 MtrunA17_Chr2g0328231 40.294 340 151 9 805 1127 50 354 9.24e-58 204
Msa0856920 MtrunA17_Chr3g0111731 51.185 211 88 4 914 1121 1 199 1.16e-49 176
Msa0856920 MtrunA17_Chr4g0074271 32.658 395 215 8 504 895 36 382 1.96e-45 171
Msa0856920 MtrunA17_Chr4g0074271 40.816 98 52 3 131 223 36 132 2.38e-14 77.0
Msa0856920 MtrunA17_Chr4g0074271 58.621 58 24 0 1063 1120 384 441 7.24e-14 75.5
Msa0856920 MtrunA17_Chr4g0074271 36.000 125 65 5 20 133 36 156 1.22e-13 74.7
Msa0856920 MtrunA17_Chr4g0074271 39.535 86 47 2 264 345 36 120 3.11e-13 73.6
Msa0856920 MtrunA17_Chr3g0111691 62.712 59 22 0 1063 1121 17 75 1.79e-17 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0856920 AT3G48670.2 51.125 622 284 6 504 1121 24 629 0.0 611
Msa0856920 AT3G48670.2 51.042 96 47 0 264 359 24 119 2.41e-23 107
Msa0856920 AT3G48670.2 40.458 131 67 4 131 256 24 148 4.47e-19 93.6
Msa0856920 AT3G48670.2 56.962 79 31 2 25 102 29 105 7.04e-18 89.7
Msa0856920 AT3G48670.2 50.000 86 41 1 388 473 27 110 1.28e-16 85.5
Msa0856920 AT3G48670.1 51.125 622 284 6 504 1121 24 629 0.0 611
Msa0856920 AT3G48670.1 51.042 96 47 0 264 359 24 119 2.41e-23 107
Msa0856920 AT3G48670.1 40.458 131 67 4 131 256 24 148 4.47e-19 93.6
Msa0856920 AT3G48670.1 56.962 79 31 2 25 102 29 105 7.04e-18 89.7
Msa0856920 AT3G48670.1 50.000 86 41 1 388 473 27 110 1.28e-16 85.5
Msa0856920 AT3G48670.3 51.125 622 284 6 504 1121 24 629 0.0 611
Msa0856920 AT3G48670.3 51.042 96 47 0 264 359 24 119 2.41e-23 107
Msa0856920 AT3G48670.3 40.458 131 67 4 131 256 24 148 4.47e-19 93.6
Msa0856920 AT3G48670.3 56.962 79 31 2 25 102 29 105 7.04e-18 89.7
Msa0856920 AT3G48670.3 50.000 86 41 1 388 473 27 110 1.28e-16 85.5
Msa0856920 AT3G12550.5 46.677 632 311 10 504 1124 8 624 0.0 556
Msa0856920 AT3G12550.5 48.718 78 40 0 268 345 12 89 3.23e-16 84.3
Msa0856920 AT3G12550.5 54.667 75 32 1 387 461 10 82 4.44e-14 77.4
Msa0856920 AT3G12550.5 36.806 144 66 6 136 260 13 150 1.30e-13 75.9
Msa0856920 AT3G12550.5 52.857 70 32 1 25 93 13 82 1.80e-13 75.5
Msa0856920 AT3G12550.4 46.445 633 312 10 504 1124 8 625 0.0 555
Msa0856920 AT3G12550.4 48.718 78 40 0 268 345 12 89 3.21e-16 84.3
Msa0856920 AT3G12550.4 54.667 75 32 1 387 461 10 82 4.37e-14 77.4
Msa0856920 AT3G12550.4 36.806 144 66 6 136 260 13 150 1.30e-13 75.9
Msa0856920 AT3G12550.4 52.857 70 32 1 25 93 13 82 1.82e-13 75.5
Msa0856920 AT3G12550.2 46.445 633 312 10 504 1124 8 625 0.0 555
Msa0856920 AT3G12550.2 48.718 78 40 0 268 345 12 89 3.21e-16 84.3
Msa0856920 AT3G12550.2 54.667 75 32 1 387 461 10 82 4.37e-14 77.4
Msa0856920 AT3G12550.2 36.806 144 66 6 136 260 13 150 1.30e-13 75.9
Msa0856920 AT3G12550.2 52.857 70 32 1 25 93 13 82 1.82e-13 75.5
Msa0856920 AT3G12550.1 46.445 633 312 10 504 1124 8 625 0.0 555
Msa0856920 AT3G12550.1 48.718 78 40 0 268 345 12 89 3.21e-16 84.3
Msa0856920 AT3G12550.1 54.667 75 32 1 387 461 10 82 4.37e-14 77.4
Msa0856920 AT3G12550.1 36.806 144 66 6 136 260 13 150 1.30e-13 75.9
Msa0856920 AT3G12550.1 52.857 70 32 1 25 93 13 82 1.82e-13 75.5
Msa0856920 AT3G12550.3 45.438 559 280 9 504 1052 8 551 5.61e-156 478
Msa0856920 AT3G12550.3 48.718 78 40 0 268 345 12 89 3.96e-16 84.0
Msa0856920 AT3G12550.3 54.667 75 32 1 387 461 10 82 3.95e-14 77.4
Msa0856920 AT3G12550.3 36.806 144 66 6 136 260 13 150 1.25e-13 75.9
Msa0856920 AT3G12550.3 52.857 70 32 1 25 93 13 82 1.48e-13 75.5
Msa0856920 AT4G00380.1 39.145 608 345 10 517 1120 32 618 1.56e-125 400
Msa0856920 AT4G00380.3 39.145 608 345 10 517 1120 32 618 1.56e-125 400
Msa0856920 AT1G15910.1 38.149 616 356 10 509 1120 23 617 6.80e-125 398
Msa0856920 AT1G80790.1 39.583 624 347 14 503 1120 18 617 8.12e-120 385
Msa0856920 AT1G80790.1 39.394 99 55 3 263 358 18 114 5.92e-14 77.0
Msa0856920 AT1G80790.1 42.424 99 51 4 131 225 19 115 1.34e-13 75.9
Msa0856920 AT1G80790.1 46.667 75 37 3 20 93 19 91 2.76e-11 68.2
Msa0856920 AT1G80790.2 39.583 624 347 14 503 1120 18 617 8.12e-120 385
Msa0856920 AT1G80790.2 39.394 99 55 3 263 358 18 114 5.92e-14 77.0
Msa0856920 AT1G80790.2 42.424 99 51 4 131 225 19 115 1.34e-13 75.9
Msa0856920 AT1G80790.2 46.667 75 37 3 20 93 19 91 2.76e-11 68.2
Msa0856920 AT5G59390.2 39.155 521 299 7 609 1121 23 533 4.34e-112 361
Msa0856920 AT5G59390.4 39.155 521 299 7 609 1121 23 533 4.34e-112 361
Msa0856920 AT5G59390.3 39.155 521 299 7 609 1121 23 533 4.34e-112 361
Msa0856920 AT4G00380.2 40.079 509 298 5 615 1120 86 590 9.08e-112 362
Msa0856920 AT1G13790.2 40.430 512 293 6 615 1121 214 718 1.31e-110 363
Msa0856920 AT1G13790.2 47.143 70 36 1 267 336 13 81 5.98e-13 73.9
Msa0856920 AT1G13790.1 40.430 512 293 6 615 1121 214 718 1.31e-110 363
Msa0856920 AT1G13790.1 47.143 70 36 1 267 336 13 81 5.98e-13 73.9
Msa0856920 AT5G59390.1 38.783 526 299 8 609 1121 23 538 7.26e-110 355
Msa0856920 AT5G59390.5 38.783 526 299 8 609 1121 23 538 7.26e-110 355
Msa0856920 AT4G01180.1 38.258 528 282 10 615 1120 27 532 6.13e-109 353
Msa0856920 AT4G01780.1 40.882 499 170 7 625 1121 79 454 4.20e-107 345
Msa0856920 AT1G80790.3 36.878 442 252 11 503 940 18 436 3.42e-77 263
Msa0856920 AT1G80790.3 39.394 99 55 3 263 358 18 114 4.44e-14 76.6
Msa0856920 AT1G80790.3 42.424 99 51 4 131 225 19 115 1.08e-13 75.5
Msa0856920 AT1G80790.3 46.667 75 37 3 20 93 19 91 1.96e-11 68.6
Msa0856920 AT3G29375.3 40.299 201 96 3 921 1120 33 210 8.11e-37 139
Msa0856920 AT3G29375.1 40.299 201 96 3 921 1120 156 333 2.54e-36 142
Msa0856920 AT3G29375.2 35.338 133 62 3 921 1052 33 142 8.12e-15 74.3

Find 257 sgRNAs with CRISPR-Local

Find 520 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGCTTTGTTGAAATATT+TGG 0.084089 5_4:+51930456 Msa0856920:CDS
TTACGTTAGTGTACAAATTT+AGG 0.092870 5_4:-51936419 None:intergenic
AGTGCATCTCAAATAAATTT+AGG 0.161480 5_4:+51931505 Msa0856920:CDS
TTTGGCTTTGGTAAAATATT+TGG 0.168256 5_4:+51929960 Msa0856920:CDS
GTGCTTATGCTTATTCATTT+AGG 0.173507 5_4:+51936363 Msa0856920:CDS
TCTAGCTTTAGTGAAATATT+TGG 0.175657 5_4:+51932490 Msa0856920:CDS
TAGGAAATACATCATATATT+TGG 0.180378 5_4:+51936272 Msa0856920:CDS
GAACTCCTTAATCATGCTTT+AGG 0.201568 5_4:+51932416 Msa0856920:CDS
AAAGCCTGCAAATAAATATT+TGG 0.216840 5_4:+51932550 Msa0856920:CDS
GCATCTTGCTCCATGATTTC+AGG 0.219322 5_4:-51933028 None:intergenic
ACAACTTGGCATCTCTTTAA+TGG 0.221793 5_4:-51934713 None:intergenic
TTTGGTCAAATATTTGAAAA+AGG 0.226402 5_4:+51931732 Msa0856920:CDS
GAAATCCTTGAACACGCTTC+TGG 0.226592 5_4:+51931118 Msa0856920:CDS
TCGTGCGGTTGAACATATTT+AGG 0.227025 5_4:+51936253 Msa0856920:CDS
TACTCCTCGGTTCAACATTA+TGG 0.232918 5_4:-51932216 None:intergenic
TGATGTACATGTTTATTAAA+TGG 0.236189 5_4:-51936453 None:intergenic
CTTTCTTCAAATGGCTGCTT+TGG 0.246195 5_4:+51933916 Msa0856920:CDS
AACATATGAACAGCTCAAAA+AGG 0.257228 5_4:+51931540 Msa0856920:CDS
CCAAGAGAAAATGCAATTAT+AGG 0.280146 5_4:+51932387 Msa0856920:CDS
TAAGGGATGAATACCGAATA+AGG 0.282234 5_4:+51932738 Msa0856920:CDS
CATACTGCCCTAATAATAAA+AGG 0.282836 5_4:+51931605 Msa0856920:CDS
AACTCCTTAATCATGCTTTA+GGG 0.296371 5_4:+51932417 Msa0856920:CDS
ATTTAGGGGCTTAAAAGTTT+AGG 0.299326 5_4:-51936403 None:intergenic
ATTAGATTGTCACGGTAAAA+AGG 0.303078 5_4:+51932886 Msa0856920:CDS
TCCGAACTCTTTGGAATTCA+TGG 0.308688 5_4:+51932780 Msa0856920:CDS
TACGTTAGTGTACAAATTTA+GGG 0.309926 5_4:-51936418 None:intergenic
TATTTATTTGCAGGCTTTAA+CGG 0.314749 5_4:-51932545 None:intergenic
TTCTTCTCGGCTTTGTATCA+TGG 0.322336 5_4:-51931443 None:intergenic
CAATCCCGGTGGCATGATTC+AGG 0.328473 5_4:-51929891 None:intergenic
CAAAGTGAAATTGAAATGTT+TGG 0.340775 5_4:+51928321 None:intergenic
GGTACATAACCTCGGAATTA+TGG 0.344195 5_4:+51935367 Msa0856920:CDS
CATTGAAAAGGCGGATCATC+TGG 0.344719 5_4:+51931708 Msa0856920:CDS
GATGCCAGTCAGGGTCCTTC+AGG 0.350160 5_4:-51934864 None:intergenic
CGAGATACCACCAACTCAAC+TGG 0.352569 5_4:-51929756 None:intergenic
GCTCTTTAATGATCAGAGTT+TGG 0.354729 5_4:-51934556 None:intergenic
CACGTAGAGTCCGAACTCTT+TGG 0.355170 5_4:+51932771 Msa0856920:CDS
CAACCATAAAAGCATGTTCT+AGG 0.355963 5_4:-51930387 None:intergenic
GTGGATTAAAACCCCTTATT+CGG 0.359990 5_4:-51932751 None:intergenic
TTGGAGATTCAGCAACTAAA+AGG 0.360226 5_4:+51934410 Msa0856920:CDS
GTGCATCTCAAATAAATTTA+GGG 0.361894 5_4:+51931506 Msa0856920:CDS
GAAATCCTTGAACATGCTTC+CGG 0.365495 5_4:+51931652 Msa0856920:CDS
TTTAATGAAATATTTGAAAC+AGG 0.366788 5_4:+51931198 Msa0856920:CDS
AAGAAGCTATGGAGTTTGTT+TGG 0.370142 5_4:-51928388 None:intergenic
AAATCCTTGAACATGCTTCC+GGG 0.383309 5_4:+51931653 Msa0856920:CDS
TTCTTCATAGCTTCTAGAAA+TGG 0.384884 5_4:-51934778 None:intergenic
TACAAAGTGGACAACATAAT+CGG 0.386803 5_4:+51932971 Msa0856920:CDS
AAATCCTTGAACACGCTTCT+GGG 0.387945 5_4:+51931119 Msa0856920:CDS
GTGATTGAAGGTGATTCTTC+TGG 0.391219 5_4:+51931253 Msa0856920:CDS
ACCCTTCTTGAGTTCTGTAT+AGG 0.392185 5_4:-51932315 None:intergenic
CTACCCCTAAAGCATGATTA+AGG 0.393007 5_4:-51932421 None:intergenic
CAGTACTTTCAATCTCTTCA+AGG 0.398329 5_4:+51928442 Msa0856920:five_prime_UTR
CATTCTCTTCACACGAATAT+CGG 0.398883 5_4:-51934737 None:intergenic
TTCTGAACTGTGTTCGTTGT+GGG 0.399874 5_4:+51934834 Msa0856920:CDS
GAAGGGTAGTCATTTGGCTT+TGG 0.407239 5_4:+51929948 Msa0856920:CDS
AACCGAGGAGTAACTGTAAC+AGG 0.408103 5_4:+51932227 Msa0856920:CDS
CAGAGAGAAGGCAACTCATC+TGG 0.411504 5_4:+51931174 Msa0856920:CDS
AATATTTCACTAAAGCTAGA+TGG 0.413692 5_4:-51932487 None:intergenic
CCGTCAAAGCCTGTTGATAA+AGG 0.414670 5_4:+51930505 Msa0856920:CDS
GAACAACAAGATAAAAGAAA+TGG 0.415980 5_4:+51933102 Msa0856920:CDS
CGACCCCAGAAGCGTGTTCA+AGG 0.420711 5_4:-51931123 None:intergenic
TCTTACGAAGAACTCAAAAC+AGG 0.423431 5_4:+51929784 Msa0856920:CDS
ACCAATACATCGTCCATCTT+CGG 0.425204 5_4:-51932699 None:intergenic
CTGAATCATGCCACCGGGAT+TGG 0.425603 5_4:+51929892 Msa0856920:CDS
TTATAATCCTGTTTCCTCTC+GGG 0.425867 5_4:-51929856 None:intergenic
TGAGTTGCGAAGAATTGAAC+TGG 0.427217 5_4:+51933493 Msa0856920:CDS
ATTCTGAAAGGCAGTTTGTA+TGG 0.427922 5_4:+51932636 Msa0856920:CDS
TGAAAGGCTTAAGTTGCAAC+TGG 0.428021 5_4:+51933451 Msa0856920:CDS
TCAGGATCACCTTTATCAAC+AGG 0.428145 5_4:-51930514 None:intergenic
TTTAAAATTTCTACAATCCA+AGG 0.428697 5_4:+51934889 Msa0856920:CDS
CTAATAATAAAAGGATAAAA+CGG 0.432980 5_4:+51931614 Msa0856920:CDS
CTTATAATCCTGTTTCCTCT+CGG 0.434843 5_4:-51929857 None:intergenic
CCTTTATCAACAGGCTTTGA+CGG 0.436764 5_4:-51930505 None:intergenic
CAGTTTGTATGGCCATGGAC+TGG 0.437249 5_4:+51932647 Msa0856920:CDS
CCATGCTCTAACAAGGATAC+TGG 0.439675 5_4:+51930950 Msa0856920:CDS
TAAAGAGAAGGGTAGTCATT+TGG 0.439933 5_4:+51929942 Msa0856920:CDS
TTTAGTGAAATATTTGGAAA+AGG 0.440221 5_4:+51932496 Msa0856920:CDS
TTTGTTGAAATATTTGGAAA+AGG 0.440273 5_4:+51930462 Msa0856920:CDS
TACATACCACCAACTTATAT+CGG 0.440647 5_4:-51930251 None:intergenic
CCTTTCTTCGTTGGTTCTGA+AGG 0.442569 5_4:-51931775 None:intergenic
ACCGAAGATGGACGATGTAT+TGG 0.444273 5_4:+51932698 Msa0856920:CDS
GAAAACAGGATTATTTGTAC+AGG 0.444980 5_4:+51930359 Msa0856920:CDS
TACATCGTCCATCTTCGGTT+TGG 0.445208 5_4:-51932694 None:intergenic
AAGGGATGAATACCGAATAA+GGG 0.445463 5_4:+51932739 Msa0856920:CDS
CTCTCTTAAATCTATATGTA+AGG 0.449418 5_4:-51934498 None:intergenic
CTTGAACATGCTTCCGGGGT+GGG 0.449618 5_4:+51931658 Msa0856920:CDS
ATACAACCTGATGTTTCCCT+TGG 0.453230 5_4:-51934906 None:intergenic
GAAACTTGCCGCAGATCAAA+AGG 0.454330 5_4:+51933967 Msa0856920:CDS
TAATGCATTGGCATTTGAAA+GGG 0.456436 5_4:+51932856 Msa0856920:CDS
CGATATTCGTGTGAAGAGAA+TGG 0.458047 5_4:+51934738 Msa0856920:CDS
CGCACAAAGGAGAAGTGTAT+TGG 0.458889 5_4:+51932454 Msa0856920:CDS
TAAAACAATACCTGAAATCA+TGG 0.459539 5_4:+51933018 Msa0856920:CDS
TAATAATAAAAGGATAAAAC+GGG 0.460262 5_4:+51931615 Msa0856920:CDS
CTTATGCTTATTCATTTAGG+TGG 0.462337 5_4:+51936366 Msa0856920:CDS
TGAGCCTAGGAGAAACTCTA+TGG 0.464621 5_4:+51929696 Msa0856920:exon
GATATTCGTGTGAAGAGAAT+GGG 0.465670 5_4:+51934739 Msa0856920:CDS
GAGATATCACCTTTCTTCGT+TGG 0.466608 5_4:-51931784 None:intergenic
TCAACAGGCTTTGACGGTCC+AGG 0.467518 5_4:-51930499 None:intergenic
TCGGTATTCATCCCTTAGCT+TGG 0.468014 5_4:-51932732 None:intergenic
CCATCTTCGGTTTGGCTAGT+GGG 0.472690 5_4:-51932686 None:intergenic
GAATTTAATAAAAGTTGGCT+AGG 0.475296 5_4:+51932827 Msa0856920:CDS
TTGTGGAATTTAATAAAAGT+TGG 0.475472 5_4:+51932822 Msa0856920:CDS
AAAGGCGGATCATCTGGCTT+TGG 0.475558 5_4:+51931714 Msa0856920:CDS
TAAAGTAGAGACATAATTTG+CGG 0.475865 5_4:+51936647 Msa0856920:three_prime_UTR
AATTTCTCACTGTTCTATCA+AGG 0.477023 5_4:+51930225 Msa0856920:CDS
TCATGGAGCAAGATGCTAGA+AGG 0.477506 5_4:+51933035 Msa0856920:CDS
CCGAACTCTTTGGAATTCAT+GGG 0.479524 5_4:+51932781 Msa0856920:CDS
CCATCAAAACCTGTGATTGA+AGG 0.482216 5_4:+51931241 Msa0856920:CDS
CCACCCCGGAAGCATGTTCA+AGG 0.482301 5_4:-51931657 None:intergenic
AGTTTGTATGGCCATGGACT+GGG 0.482657 5_4:+51932648 Msa0856920:CDS
ACAAAGTGGACAACATAATC+GGG 0.483753 5_4:+51932972 Msa0856920:CDS
ATTTCCCTGTACACATAGTC+CGG 0.484237 5_4:-51931100 None:intergenic
AAATTCCACAACTGCAGCTC+CGG 0.484281 5_4:-51932810 None:intergenic
AACATGCTTCCGGGGTGGGT+TGG 0.485541 5_4:+51931662 Msa0856920:CDS
ATATCGCAAACAGCAGGATC+AGG 0.485842 5_4:-51930532 None:intergenic
GTGAAAGTGGTTCCAAGCTA+AGG 0.486424 5_4:+51932720 Msa0856920:CDS
GTACTGCCCTAATAGAAAAC+AGG 0.487367 5_4:+51930345 Msa0856920:CDS
TGAAGTAGAGACATAATTTG+TGG 0.488702 5_4:+51936591 Msa0856920:three_prime_UTR
TCCATCTTCGGTTTGGCTAG+TGG 0.489016 5_4:-51932687 None:intergenic
AAGAGAAGTGCTAAAGAGAA+GGG 0.491974 5_4:+51929931 Msa0856920:CDS
CCCATGAATTCCAAAGAGTT+CGG 0.492366 5_4:-51932781 None:intergenic
TGAAATTGAAGAAGAAGCTA+TGG 0.496867 5_4:-51928399 None:intergenic
CCACTTTGTAGTCATCAGCT+CGG 0.497589 5_4:-51932958 None:intergenic
ATAATGCATTGGCATTTGAA+AGG 0.498302 5_4:+51932855 Msa0856920:CDS
CTTGATACTTCAAGCTTCTG+TGG 0.498905 5_4:+51936300 Msa0856920:CDS
CCCACTAGCCAAACCGAAGA+TGG 0.498943 5_4:+51932686 Msa0856920:CDS
AGAGACATAATTTGTGGTGG+TGG 0.499578 5_4:+51936597 Msa0856920:three_prime_UTR
CGGGGAGCAACTACAAAAGA+TGG 0.503358 5_4:+51932991 Msa0856920:CDS
GGAGCAAGATCTTAACAGTA+AGG 0.504956 5_4:+51929981 Msa0856920:CDS
AAGGATATTACGAGTATGCC+TGG 0.507027 5_4:+51930481 Msa0856920:CDS
CGGAATCCCAGTTGAGTTGG+TGG 0.507450 5_4:+51929749 Msa0856920:CDS
CCTTCAGAACCAACGAAGAA+AGG 0.509478 5_4:+51931775 Msa0856920:CDS
TACAATCCAAGGGAAACATC+AGG 0.511597 5_4:+51934900 Msa0856920:CDS
GAGGTTATGTACCGCCCACT+TGG 0.513287 5_4:-51935357 None:intergenic
AGTACCTGAAGGACCCTGAC+TGG 0.513631 5_4:+51934860 Msa0856920:CDS
TAAAACGGGATTACGTGTAC+AGG 0.516022 5_4:+51931629 Msa0856920:CDS
TCACACCGGAGCTGCAGTTG+TGG 0.516552 5_4:+51932805 Msa0856920:CDS
TGTTTCCTCTCGGGGCAGTA+CGG 0.517605 5_4:-51929847 None:intergenic
CTTAATCATGCTTTAGGGGT+AGG 0.519030 5_4:+51932422 Msa0856920:CDS
CACTTTGTAGTCATCAGCTC+GGG 0.519310 5_4:-51932957 None:intergenic
GTACTGCCCCGAGAGGAAAC+AGG 0.521545 5_4:+51929849 Msa0856920:CDS
GCTAGGGTTATATAATGCAT+TGG 0.522455 5_4:+51932844 Msa0856920:CDS
TATGGCTCACTGCTCTATCA+AGG 0.523383 5_4:+51929714 Msa0856920:exon
CAACTGGGATTCCGCTATAC+CGG 0.523963 5_4:-51929740 None:intergenic
ACTTCGCATGGACATTGTGA+TGG 0.524468 5_4:+51933147 Msa0856920:CDS
ATCCTATACAGAACTCAAGA+AGG 0.524856 5_4:+51932313 Msa0856920:CDS
TGAACTACTCCGACCAATCC+CGG 0.527270 5_4:-51929905 None:intergenic
CAATGAAATTACACTTCGCA+TGG 0.529219 5_4:+51933135 Msa0856920:CDS
GAAGAGAAGTGCTAAAGAGA+AGG 0.536675 5_4:+51929930 Msa0856920:CDS
CTTGAACACGCTTCTGGGGT+CGG 0.536954 5_4:+51931124 Msa0856920:CDS
TGAGAAATTACTGTTTGTCC+TGG 0.537343 5_4:-51930211 None:intergenic
GGAAAACAATCTTATGAATG+TGG 0.540930 5_4:+51932571 Msa0856920:CDS
ACATACAACCAACTTATTCG+AGG 0.540968 5_4:-51930983 None:intergenic
CATAATATTGAGTTGAGCCT+AGG 0.542422 5_4:+51929683 Msa0856920:five_prime_UTR
TTAAAATTTCTACAATCCAA+GGG 0.542987 5_4:+51934890 Msa0856920:CDS
AAAGGCAGTTTGTATGGCCA+TGG 0.546980 5_4:+51932642 Msa0856920:CDS
GAAGAATCACCTTCAATCAC+AGG 0.550222 5_4:-51931250 None:intergenic
GAATGAACTGAGAAACGAGA+TGG 0.550613 5_4:+51935278 Msa0856920:CDS
ACTCAAAACAGGGAAACAAA+AGG 0.551178 5_4:+51929795 Msa0856920:CDS
CACTGCTCTATCAAGGATAC+CGG 0.553781 5_4:+51929721 Msa0856920:CDS
CTTCTGAACTGTGTTCGTTG+TGG 0.553927 5_4:+51934833 Msa0856920:CDS
ACACGAATATCGGCACAACT+TGG 0.554139 5_4:-51934727 None:intergenic
TAAGAGCAATGATGAACTGC+AGG 0.555224 5_4:+51934580 Msa0856920:CDS
ATGGCCATGGACTGGGATTG+TGG 0.557685 5_4:+51932655 Msa0856920:CDS
CCAGTATCCTTGTTAGAGCA+TGG 0.557823 5_4:-51930950 None:intergenic
AACTAGAACTGACATTGAAA+AGG 0.558417 5_4:+51931696 Msa0856920:CDS
AAAATCCGGTCTTTATGCGT+GGG 0.559938 5_4:+51932931 Msa0856920:CDS
CAAGATCTTAACAGTAAGGA+TGG 0.560367 5_4:+51929985 Msa0856920:CDS
TCAAGGATACCGATATAAGT+TGG 0.561942 5_4:+51930242 Msa0856920:CDS
GGCAACCCACGCATAAAGAC+CGG 0.562276 5_4:-51932936 None:intergenic
CGGAATGTGAAAACCTCAGA+CGG 0.562795 5_4:+51930307 Msa0856920:CDS
ACATATAGATTTAAGAGAGA+AGG 0.562950 5_4:+51934502 Msa0856920:CDS
AAGAGAGCGACTTTGCAAGA+AGG 0.565508 5_4:+51935405 Msa0856920:CDS
CACGGCTCCATGCTCTAACA+AGG 0.565992 5_4:+51930943 Msa0856920:CDS
TGTGGTATATCGCAAACAGC+AGG 0.566782 5_4:-51930538 None:intergenic
GCATCGAGATCTATAGATCA+AGG 0.566792 5_4:+51930009 Msa0856920:CDS
GAACTCCTGAATCATGCCAC+CGG 0.567244 5_4:+51929886 Msa0856920:CDS
ACTTGATGTTCTGAATATGA+TGG 0.568049 5_4:+51934472 Msa0856920:CDS
GGAACAGTCACTTCGAGACA+TGG 0.568492 5_4:+51934523 Msa0856920:CDS
ACAACTGAAACTCTCGGCCG+AGG 0.569131 5_4:-51929824 None:intergenic
ATGAAGCACATGGAAGATGA+TGG 0.570978 5_4:+51934446 Msa0856920:CDS
GGTACAAAATTGATAAGTCA+AGG 0.572412 5_4:+51930911 Msa0856920:intron
AATGAACTGAGAAACGAGAT+GGG 0.572599 5_4:+51935279 Msa0856920:CDS
ATAAATGAATATAATCCAAG+TGG 0.576645 5_4:+51935342 Msa0856920:CDS
CCTTGAACATGCTTCCGGGG+TGG 0.576708 5_4:+51931657 Msa0856920:CDS
CTTCGCATGGACATTGTGAT+GGG 0.577002 5_4:+51933148 Msa0856920:CDS
TGAACTGCAGGAAGCTCGAA+AGG 0.577266 5_4:+51934592 Msa0856920:CDS
TATAATCCTGTTTCCTCTCG+GGG 0.577529 5_4:-51929855 None:intergenic
TAGCGGAATCCCAGTTGAGT+TGG 0.580792 5_4:+51929746 Msa0856920:CDS
ATCATGCCACCGGGATTGGT+CGG 0.582293 5_4:+51929896 Msa0856920:CDS
TTTCACTAAAGCTAGATGGT+TGG 0.583028 5_4:-51932483 None:intergenic
TCCTATACAGAACTCAAGAA+GGG 0.583243 5_4:+51932314 Msa0856920:CDS
AATTTAATAAAAGTTGGCTA+GGG 0.584434 5_4:+51932828 Msa0856920:CDS
AAAGAGAGGTATCAGAGAGA+AGG 0.584942 5_4:+51931162 Msa0856920:CDS
CAAGTGATCCTCGAATAAGT+TGG 0.585633 5_4:+51930975 Msa0856920:CDS
GGATCTTATGACTATGAATG+TGG 0.586587 5_4:+51932517 Msa0856920:CDS
GACCTGTTACAGTTACTCCT+CGG 0.587093 5_4:-51932229 None:intergenic
TGAAAGTGGTTCCAAGCTAA+GGG 0.589876 5_4:+51932721 Msa0856920:CDS
AAGGAGAAGTGTATTGGAGA+AGG 0.590402 5_4:+51932460 Msa0856920:CDS
TGAGCCATAGAGTTTCTCCT+AGG 0.590843 5_4:-51929700 None:intergenic
AATCCTTGAACACGCTTCTG+GGG 0.591372 5_4:+51931120 Msa0856920:CDS
GGACGATGTATTGGTGAAAG+TGG 0.596980 5_4:+51932707 Msa0856920:CDS
CAAAGAGTTCGGACTCTACG+TGG 0.596988 5_4:-51932770 None:intergenic
AACTCCTGAATCATGCCACC+GGG 0.601267 5_4:+51929887 Msa0856920:CDS
AAGCATAAGCACAAAGCTTG+TGG 0.603020 5_4:-51936352 None:intergenic
CAGAGTAGTTCGCAAAAGAG+AGG 0.606428 5_4:+51931148 Msa0856920:CDS
ACTCCTTAATCATGCTTTAG+GGG 0.612063 5_4:+51932418 Msa0856920:CDS
ACATTCTTGTCAATTCTGAA+AGG 0.612702 5_4:+51932624 Msa0856920:CDS
AGGGATGAATACCGAATAAG+GGG 0.613072 5_4:+51932740 Msa0856920:CDS
GTTACGAACACAATAAGTCC+AGG 0.613921 5_4:+51930193 Msa0856920:intron
TGGAATTCATGGGGTCACAC+CGG 0.616709 5_4:+51932791 Msa0856920:CDS
ACGTTAGTGTACAAATTTAG+GGG 0.618876 5_4:-51936417 None:intergenic
GGAATGTGAAAACCTCAGAC+GGG 0.619496 5_4:+51930308 Msa0856920:CDS
AGGCACGTAATGAAAGTGAA+AGG 0.620125 5_4:+51933525 Msa0856920:CDS
TTAACCACAATCCCAGTCCA+TGG 0.620258 5_4:-51932659 None:intergenic
AGGATACCGATATAAGTTGG+TGG 0.620895 5_4:+51930245 Msa0856920:CDS
AATCCTTGAACATGCTTCCG+GGG 0.621612 5_4:+51931654 Msa0856920:CDS
TGCGTAATTCCATAATTCCG+AGG 0.622277 5_4:-51935376 None:intergenic
AACAGGTCACCTCTCTGAGA+AGG 0.622552 5_4:+51932244 Msa0856920:CDS
GAGATACCACCAACTCAACT+GGG 0.622653 5_4:-51929755 None:intergenic
CTTACGAAGAACTCAAAACA+GGG 0.629180 5_4:+51929785 Msa0856920:CDS
CAAAGTGAGAATCTCAGATG+AGG 0.630595 5_4:+51931042 Msa0856920:CDS
CGAAGAAGTTTACAAAGCTG+TGG 0.631485 5_4:+51935302 Msa0856920:CDS
TAGAACTGACATTGAAAAGG+CGG 0.632651 5_4:+51931699 Msa0856920:CDS
CTTGCTCAATCTCACAGTCA+AGG 0.633620 5_4:+51933184 Msa0856920:CDS
TAAATGAATATAATCCAAGT+GGG 0.634711 5_4:+51935343 Msa0856920:CDS
GCGTATGAATTAGATTGTCA+CGG 0.637693 5_4:+51932878 Msa0856920:CDS
AAAACAGGATTATTTGTACA+GGG 0.638147 5_4:+51930360 Msa0856920:CDS
GAATTATGGAATTACGCAGA+GGG 0.640718 5_4:+51935381 Msa0856920:CDS
TATCAAGGATACCGGTATAG+CGG 0.641173 5_4:+51929729 Msa0856920:CDS
TGAGATACTCCAACCCACCC+CGG 0.643091 5_4:-51931671 None:intergenic
TAGGTCAAAGTGACGCACAA+AGG 0.645388 5_4:+51932441 Msa0856920:CDS
AAAACCGGACTATGTGTACA+GGG 0.646630 5_4:+51931096 Msa0856920:CDS
CGAACTCTTTGGAATTCATG+GGG 0.646735 5_4:+51932782 Msa0856920:CDS
AGAAGTTTACAAAGCTGTGG+TGG 0.648609 5_4:+51935305 Msa0856920:CDS
GATACTTCAAGCTTCTGTGG+AGG 0.653683 5_4:+51936303 Msa0856920:CDS
AAGGATCTTATAAATGTCGG+TGG 0.656155 5_4:+51931751 Msa0856920:CDS
ACTAAATGTCATGAAGCACA+TGG 0.660073 5_4:+51934436 Msa0856920:CDS
ATATTCGTGTGAAGAGAATG+GGG 0.660732 5_4:+51934740 Msa0856920:CDS
GCATATGAAAGTCCCGTCTG+AGG 0.662282 5_4:-51930320 None:intergenic
TATTAGCATCCTTCTCAGAG+AGG 0.663538 5_4:-51932253 None:intergenic
AAGTGGGCGGTACATAACCT+CGG 0.665757 5_4:+51935359 Msa0856920:CDS
GTACGGACAACTGAAACTCT+CGG 0.669727 5_4:-51929830 None:intergenic
CCGAGCTGATGACTACAAAG+TGG 0.670561 5_4:+51932958 Msa0856920:CDS
AAGTCAAGGACAAACTGTCA+CGG 0.680760 5_4:+51930925 Msa0856920:CDS
ACTCAAGAAGGGTATTCACA+AGG 0.682005 5_4:+51932325 Msa0856920:CDS
AAAACGGGATTACGTGTACA+GGG 0.683449 5_4:+51931630 Msa0856920:CDS
ATGAATATAATCCAAGTGGG+CGG 0.689994 5_4:+51935346 Msa0856920:CDS
GCAAGTGAAAGTCTTATCTG+AGG 0.693684 5_4:-51931581 None:intergenic
AGTAGAGACATAATTTGTGG+TGG 0.696631 5_4:+51936594 Msa0856920:three_prime_UTR
GGAATTATGGAATTACGCAG+AGG 0.702790 5_4:+51935380 Msa0856920:CDS
GTTGGATGAAGAGATTAACA+AGG 0.706574 5_4:+51933553 Msa0856920:CDS
CAAAGTGGACAACATAATCG+GGG 0.713082 5_4:+51932973 Msa0856920:CDS
GTTGTCCGTACTGCCCCGAG+AGG 0.713527 5_4:+51929842 Msa0856920:CDS
GTTGTGGGAAGAGTACCTGA+AGG 0.717510 5_4:+51934849 Msa0856920:CDS
GGCACCATAATGTTGAACCG+AGG 0.724080 5_4:+51932212 Msa0856920:intron
TATTCGTGTGAAGAGAATGG+GGG 0.746922 5_4:+51934741 Msa0856920:CDS
ACTACTCCGACCAATCCCGG+TGG 0.792342 5_4:-51929902 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAATTAATAAAAACAAA+TGG + chr5_4:51928734-51928753 Msa0856920:intron 10.0%
!! AAGAATTAATAAAAACAAAT+GGG + chr5_4:51928735-51928754 Msa0856920:intron 10.0%
!! AAAGTAGAAAATAATGAAAT+GGG - chr5_4:51928532-51928551 None:intergenic 15.0%
!! TAAAGTAGAAAATAATGAAA+TGG - chr5_4:51928533-51928552 None:intergenic 15.0%
!!! ACAATATTAATCAGTTTTAT+TGG - chr5_4:51930099-51930118 None:intergenic 15.0%
!!! TTCTAGTTAATATATTTTTC+TGG + chr5_4:51930573-51930592 Msa0856920:intron 15.0%
!!! TCTAGTTAATATATTTTTCT+GGG + chr5_4:51930574-51930593 Msa0856920:intron 15.0%
!! ACTATATATAAAAGAGATAT+CGG + chr5_4:51930646-51930665 Msa0856920:intron 15.0%
!!! TTTAATGAAATATTTGAAAC+AGG + chr5_4:51931198-51931217 Msa0856920:CDS 15.0%
!! AATATCATTGTTAATTGAAT+TGG - chr5_4:51931343-51931362 None:intergenic 15.0%
!! ATTCAATTAACAATGATATT+TGG + chr5_4:51931343-51931362 Msa0856920:intron 15.0%
!!! AAAACAATATTTTGTTTTTC+AGG + chr5_4:51931418-51931437 Msa0856920:intron 15.0%
!!! GTTTTATCCTTTTATTATTA+GGG - chr5_4:51931615-51931634 None:intergenic 15.0%
!! CTAATAATAAAAGGATAAAA+CGG + chr5_4:51931614-51931633 Msa0856920:CDS 15.0%
!! TAATAATAAAAGGATAAAAC+GGG + chr5_4:51931615-51931634 Msa0856920:CDS 15.0%
!!! AATGGGATAATAAATTTTAA+GGG + chr5_4:51932009-51932028 Msa0856920:intron 15.0%
!!! ATAAATTTTAAGGGTATTAT+AGG + chr5_4:51932018-51932037 Msa0856920:intron 15.0%
!! AAACAAAATTTAGAAACAAT+TGG - chr5_4:51933264-51933283 None:intergenic 15.0%
!! AAAGTGAAAATATTGTTTAA+GGG + chr5_4:51933646-51933665 Msa0856920:intron 15.0%
!! ATTCTTCAATAATAATGATA+TGG + chr5_4:51933817-51933836 Msa0856920:intron 15.0%
!! AAGCATTAAAACAAATTATA+CGG - chr5_4:51933994-51934013 None:intergenic 15.0%
!!! GCTATTTCTATAATAAATAA+AGG + chr5_4:51935706-51935725 Msa0856920:intron 15.0%
!! AAGTAGAAAATAATGAAATG+GGG - chr5_4:51928531-51928550 None:intergenic 20.0%
!! AAGACATAATTAAAGTTCAA+AGG - chr5_4:51928583-51928602 None:intergenic 20.0%
!!! TTTTGCCTTAATTAATTCAT+TGG + chr5_4:51928650-51928669 Msa0856920:intron 20.0%
!!! TGATGGATAATTAAGTTTTA+AGG + chr5_4:51928700-51928719 Msa0856920:intron 20.0%
!!! GATGGATAATTAAGTTTTAA+GGG + chr5_4:51928701-51928720 Msa0856920:intron 20.0%
!! TACTTGATGTTGAATTTATA+AGG + chr5_4:51928799-51928818 Msa0856920:intron 20.0%
!!! TTAAGTTGTTTATCCAAATT+GGG - chr5_4:51928841-51928860 None:intergenic 20.0%
!!! ATTAAGTTGTTTATCCAAAT+TGG - chr5_4:51928842-51928861 None:intergenic 20.0%
!! ATTTAGTGAATTTAAGTCAT+TGG + chr5_4:51929078-51929097 Msa0856920:intron 20.0%
!! ATCTGAGAAGTTATTAAAAA+CGG - chr5_4:51929165-51929184 None:intergenic 20.0%
!!! TTTTTAATAACTTCTCAGAT+TGG + chr5_4:51929165-51929184 Msa0856920:intron 20.0%
!! TGACTGTAATAAATTTAGAT+TGG + chr5_4:51929188-51929207 Msa0856920:intron 20.0%
!!! TTTTGTGACATTTTTGTATT+AGG + chr5_4:51929474-51929493 Msa0856920:intron 20.0%
!!! TATTTTAGAGCTTTGAATAT+AGG - chr5_4:51929527-51929546 None:intergenic 20.0%
!! AATATTAGTATTCGTTGTTT+AGG - chr5_4:51929643-51929662 None:intergenic 20.0%
!!! AATATTGATTTTTGTCTTTC+AGG + chr5_4:51929657-51929676 Msa0856920:intron 20.0%
!!! TTTTGATTAAATTATTTGCC+TGG + chr5_4:51930122-51930141 Msa0856920:intron 20.0%
!!! AATAATCCTGTTTTCTATTA+GGG - chr5_4:51930354-51930373 None:intergenic 20.0%
!!! AAATAATCCTGTTTTCTATT+AGG - chr5_4:51930355-51930374 None:intergenic 20.0%
!! TTTGTTGAAATATTTGGAAA+AGG + chr5_4:51930462-51930481 Msa0856920:CDS 20.0%
!! AAAATAATATCACTGTGAAA+TGG - chr5_4:51930622-51930641 None:intergenic 20.0%
!! CTATATATAAAAGAGATATC+GGG + chr5_4:51930647-51930666 Msa0856920:intron 20.0%
!! TTTATAGAAAATCAGAAAGA+CGG + chr5_4:51930794-51930813 Msa0856920:intron 20.0%
!!! AAAACTAACTTTTATCTTTC+AGG + chr5_4:51930890-51930909 Msa0856920:intron 20.0%
!!! CGTTTTATCCTTTTATTATT+AGG - chr5_4:51931616-51931635 None:intergenic 20.0%
!! TTTGGTCAAATATTTGAAAA+AGG + chr5_4:51931732-51931751 Msa0856920:CDS 20.0%
!! AAAAAGGATCTTATAAATGT+CGG + chr5_4:51931748-51931767 Msa0856920:CDS 20.0%
!! ATTTAATATTGCATTGAACT+AGG - chr5_4:51931935-51931954 None:intergenic 20.0%
!!! GAATGGGATAATAAATTTTA+AGG + chr5_4:51932008-51932027 Msa0856920:intron 20.0%
!! AATGACAAATAAAGAAACAA+AGG + chr5_4:51932083-51932102 Msa0856920:intron 20.0%
!! ATGACAAATAAAGAAACAAA+GGG + chr5_4:51932084-51932103 Msa0856920:intron 20.0%
!! TTTAGTGAAATATTTGGAAA+AGG + chr5_4:51932496-51932515 Msa0856920:CDS 20.0%
!!! TTTTCCAAATATTTATTTGC+AGG - chr5_4:51932557-51932576 None:intergenic 20.0%
!! TTGTGGAATTTAATAAAAGT+TGG + chr5_4:51932822-51932841 Msa0856920:CDS 20.0%
!! AATTTAATAAAAGTTGGCTA+GGG + chr5_4:51932828-51932847 Msa0856920:CDS 20.0%
!! CAAAGTGAAAATATTGTTTA+AGG + chr5_4:51933645-51933664 Msa0856920:intron 20.0%
!! GAAAAAAAGAGGAAAAAAAT+TGG - chr5_4:51933713-51933732 None:intergenic 20.0%
!!! AATAAATAATGCCAAACTTT+TGG - chr5_4:51933782-51933801 None:intergenic 20.0%
!!! TGGATTGTAGAAATTTTAAA+TGG - chr5_4:51934889-51934908 None:intergenic 20.0%
!!! TTTAAAATTTCTACAATCCA+AGG + chr5_4:51934889-51934908 Msa0856920:CDS 20.0%
!! TTAAAATTTCTACAATCCAA+GGG + chr5_4:51934890-51934909 Msa0856920:CDS 20.0%
!!! AAATAATGCAATGTACTTTT+AGG - chr5_4:51935172-51935191 None:intergenic 20.0%
!! ATAAATGAATATAATCCAAG+TGG + chr5_4:51935342-51935361 Msa0856920:CDS 20.0%
!! TAAATGAATATAATCCAAGT+GGG + chr5_4:51935343-51935362 Msa0856920:CDS 20.0%
!!! TAAAATTGGAATTTTGAGAA+AGG - chr5_4:51935595-51935614 None:intergenic 20.0%
!! TGTTGTGAATACTATAAAAT+TGG - chr5_4:51935609-51935628 None:intergenic 20.0%
!! CAAAATCAAGTTAATCAATT+AGG - chr5_4:51935941-51935960 None:intergenic 20.0%
!! TAGGAAATACATCATATATT+TGG + chr5_4:51936272-51936291 Msa0856920:CDS 20.0%
!! TGATGTACATGTTTATTAAA+TGG - chr5_4:51936456-51936475 None:intergenic 20.0%
! CACATCCAATGAATTAATTA+AGG - chr5_4:51928658-51928677 None:intergenic 25.0%
! ATACAAAAATGTCACAAAAC+AGG - chr5_4:51929473-51929492 None:intergenic 25.0%
!!! TTTGGCTTTGGTAAAATATT+TGG + chr5_4:51929960-51929979 Msa0856920:CDS 25.0%
! AAAACAGGATTATTTGTACA+GGG + chr5_4:51930360-51930379 Msa0856920:CDS 25.0%
!! TCTTGCTTTGTTGAAATATT+TGG + chr5_4:51930456-51930475 Msa0856920:CDS 25.0%
!! ATTTTTCTGGGTAATTGAAT+AGG + chr5_4:51930586-51930605 Msa0856920:intron 25.0%
!! TTTTATCAAGAACTCAAGAA+TGG + chr5_4:51931013-51931032 Msa0856920:CDS 25.0%
! ATTCAGTATATTCAGTAACT+AGG - chr5_4:51931316-51931335 None:intergenic 25.0%
!! TTTTATCAAAGCTTAACAGT+CGG + chr5_4:51931391-51931410 Msa0856920:intron 25.0%
!! ACTTTTATCAGAATCTTTGT+CGG - chr5_4:51931488-51931507 None:intergenic 25.0%
! AGTGCATCTCAAATAAATTT+AGG + chr5_4:51931505-51931524 Msa0856920:CDS 25.0%
! GTGCATCTCAAATAAATTTA+GGG + chr5_4:51931506-51931525 Msa0856920:CDS 25.0%
!! TTTTATTATTAGGGCAGTAT+GGG - chr5_4:51931606-51931625 None:intergenic 25.0%
! GGCATTTAAAAAAGATTAGA+GGG - chr5_4:51931871-51931890 None:intergenic 25.0%
! CATTAAATATCATTGTGAGT+TGG - chr5_4:51932129-51932148 None:intergenic 25.0%
! CAACTCACAATGATATTTAA+TGG + chr5_4:51932127-51932146 Msa0856920:intron 25.0%
! CACAATGATATTTAATGGAA+TGG + chr5_4:51932132-51932151 Msa0856920:intron 25.0%
!! TATAATTGCATTTTCTCTTG+GGG - chr5_4:51932388-51932407 None:intergenic 25.0%
!! CTATAATTGCATTTTCTCTT+GGG - chr5_4:51932389-51932408 None:intergenic 25.0%
! AATATTTCACTAAAGCTAGA+TGG - chr5_4:51932490-51932509 None:intergenic 25.0%
!!! TCTAGCTTTAGTGAAATATT+TGG + chr5_4:51932490-51932509 Msa0856920:CDS 25.0%
!! TATTTATTTGCAGGCTTTAA+CGG - chr5_4:51932548-51932567 None:intergenic 25.0%
! AAAGCCTGCAAATAAATATT+TGG + chr5_4:51932550-51932569 Msa0856920:CDS 25.0%
! GAATTTAATAAAAGTTGGCT+AGG + chr5_4:51932827-51932846 Msa0856920:CDS 25.0%
! TCTTATACTGAACAAAAATC+CGG + chr5_4:51932917-51932936 Msa0856920:CDS 25.0%
! TAAAACAATACCTGAAATCA+TGG + chr5_4:51933018-51933037 Msa0856920:CDS 25.0%
! GAACAACAAGATAAAAGAAA+TGG + chr5_4:51933102-51933121 Msa0856920:CDS 25.0%
! AAAAAGGGAAAGAAAAAAAG+AGG - chr5_4:51933724-51933743 None:intergenic 25.0%
! GAATCTATAAACCAAAAGTT+TGG + chr5_4:51933768-51933787 Msa0856920:intron 25.0%
! TCTTGTCAAATGTTTCATTT+AGG + chr5_4:51933847-51933866 Msa0856920:intron 25.0%
! AAAAGCAAAAAACATAAGCA+TGG - chr5_4:51933874-51933893 None:intergenic 25.0%
! GAAAAATCACTTTCTTCAAA+TGG + chr5_4:51933907-51933926 Msa0856920:CDS 25.0%
! ACTAAATGTGAAACAAAAAC+TGG + chr5_4:51934385-51934404 Msa0856920:CDS 25.0%
! CTCTCTTAAATCTATATGTA+AGG - chr5_4:51934501-51934520 None:intergenic 25.0%
! ACATATAGATTTAAGAGAGA+AGG + chr5_4:51934502-51934521 Msa0856920:CDS 25.0%
!!! GATATGATTTTTCAATCCAA+CGG - chr5_4:51934943-51934962 None:intergenic 25.0%
!! TCTTACGTGCTTTTATTAAA+CGG - chr5_4:51935042-51935061 None:intergenic 25.0%
! GAAATTGCATAGACAAAAAA+GGG + chr5_4:51935452-51935471 Msa0856920:intron 25.0%
! AAATTGCATAGACAAAAAAG+GGG + chr5_4:51935453-51935472 Msa0856920:intron 25.0%
! ATGATAAGAGCTTATGTTAT+AGG - chr5_4:51935668-51935687 None:intergenic 25.0%
! ATAAGCTCTTATCATATAAG+TGG + chr5_4:51935673-51935692 Msa0856920:intron 25.0%
!! TTTATTTCCATAAGCTTTTC+AGG - chr5_4:51935787-51935806 None:intergenic 25.0%
! TTACTGACATAAGCATTTAT+GGG - chr5_4:51935867-51935886 None:intergenic 25.0%
! TTTACTGACATAAGCATTTA+TGG - chr5_4:51935868-51935887 None:intergenic 25.0%
! AATAAATCCAAAGATATGCT+TGG - chr5_4:51935910-51935929 None:intergenic 25.0%
!! TAATTGAGTTTGAAGTAAAG+TGG + chr5_4:51935979-51935998 Msa0856920:intron 25.0%
! AAGTTTCGTGTAAAAATTAG+TGG + chr5_4:51936038-51936057 Msa0856920:intron 25.0%
! TTATATTACTCGTCAAACTA+AGG + chr5_4:51936086-51936105 Msa0856920:intron 25.0%
! AGTTACATCATAAAACAATG+TGG - chr5_4:51936165-51936184 None:intergenic 25.0%
!!! ATTGTTTTATGATGTAACTG+TGG + chr5_4:51936166-51936185 Msa0856920:intron 25.0%
! TACGTTAGTGTACAAATTTA+GGG - chr5_4:51936421-51936440 None:intergenic 25.0%
! TTACGTTAGTGTACAAATTT+AGG - chr5_4:51936422-51936441 None:intergenic 25.0%
!!! TTGCTTTTATGTATTCAACA+AGG + chr5_4:51936503-51936522 Msa0856920:three_prime_UTR 25.0%
!! TATTCGAACATTTTCTTTTG+TGG + chr5_4:51936562-51936581 Msa0856920:three_prime_UTR 25.0%
!!! GTTATGCACTTGTTTTTTAT+TGG + chr5_4:51936621-51936640 Msa0856920:three_prime_UTR 25.0%
TGAAATTGAAGAAGAAGCTA+TGG - chr5_4:51928402-51928421 None:intergenic 30.0%
TGATGAAGAAAAAAAGAGGA+AGG - chr5_4:51928476-51928495 None:intergenic 30.0%
TGCATGATGAAGAAAAAAAG+AGG - chr5_4:51928480-51928499 None:intergenic 30.0%
TTGGATGTGAATTTCTTTGT+TGG + chr5_4:51928669-51928688 Msa0856920:intron 30.0%
GTTGAATTTATAAGGACTTG+TGG + chr5_4:51928807-51928826 Msa0856920:intron 30.0%
AATATGCTGAAAACAACGTA+TGG + chr5_4:51928935-51928954 Msa0856920:intron 30.0%
ATATGCTGAAAACAACGTAT+GGG + chr5_4:51928936-51928955 Msa0856920:intron 30.0%
TCCATTGTAAGCATTAAATC+TGG + chr5_4:51929217-51929236 Msa0856920:intron 30.0%
TCCAGATTTAATGCTTACAA+TGG - chr5_4:51929221-51929240 None:intergenic 30.0%
ATTCGTGCTAAAATTCAAGT+AGG + chr5_4:51929304-51929323 Msa0856920:intron 30.0%
CTTTGAATATAGGATTGCAT+TGG - chr5_4:51929517-51929536 None:intergenic 30.0%
TACTTCACGATTGTATTTAG+TGG + chr5_4:51929597-51929616 Msa0856920:intron 30.0%
GAAACAAAAGGTAAAAACCT+CGG + chr5_4:51929807-51929826 Msa0856920:CDS 30.0%
AATTTCTCACTGTTCTATCA+AGG + chr5_4:51930225-51930244 Msa0856920:CDS 30.0%
TACATACCACCAACTTATAT+CGG - chr5_4:51930254-51930273 None:intergenic 30.0%
GAAAACAGGATTATTTGTAC+AGG + chr5_4:51930359-51930378 Msa0856920:CDS 30.0%
CTAGAACGAAAAAATTTCTG+TGG - chr5_4:51930559-51930578 None:intergenic 30.0%
ATAAAAGAGATATCGGGATT+TGG + chr5_4:51930653-51930672 Msa0856920:intron 30.0%
GGTACAAAATTGATAAGTCA+AGG + chr5_4:51930911-51930930 Msa0856920:intron 30.0%
!!! TAGTCCGGTTTTTTCATTTT+CGG - chr5_4:51931088-51931107 None:intergenic 30.0%
AACATATGAACAGCTCAAAA+AGG + chr5_4:51931540-51931559 Msa0856920:CDS 30.0%
ACATATGAACAGCTCAAAAA+GGG + chr5_4:51931541-51931560 Msa0856920:CDS 30.0%
! CTTTTATTATTAGGGCAGTA+TGG - chr5_4:51931607-51931626 None:intergenic 30.0%
CATACTGCCCTAATAATAAA+AGG + chr5_4:51931605-51931624 Msa0856920:CDS 30.0%
AACTAGAACTGACATTGAAA+AGG + chr5_4:51931696-51931715 Msa0856920:CDS 30.0%
TAAAAAAGATTAGAGGGAGT+AGG - chr5_4:51931865-51931884 None:intergenic 30.0%
CGGCATTTAAAAAAGATTAG+AGG - chr5_4:51931872-51931891 None:intergenic 30.0%
ACACAATTTATCAACAGAAG+CGG - chr5_4:51931892-51931911 None:intergenic 30.0%
TAGGAAAATGACATGTAAGT+AGG - chr5_4:51931916-51931935 None:intergenic 30.0%
!!! AACTCCTTATTTTGTTTTGC+AGG + chr5_4:51932191-51932210 Msa0856920:intron 30.0%
! CCTATAATTGCATTTTCTCT+TGG - chr5_4:51932390-51932409 None:intergenic 30.0%
CCAAGAGAAAATGCAATTAT+AGG + chr5_4:51932387-51932406 Msa0856920:CDS 30.0%
AACTCCTTAATCATGCTTTA+GGG + chr5_4:51932417-51932436 Msa0856920:CDS 30.0%
GGAAAACAATCTTATGAATG+TGG + chr5_4:51932571-51932590 Msa0856920:CDS 30.0%
ACATTCTTGTCAATTCTGAA+AGG + chr5_4:51932624-51932643 Msa0856920:CDS 30.0%
! ATAATGCATTGGCATTTGAA+AGG + chr5_4:51932855-51932874 Msa0856920:CDS 30.0%
! TAATGCATTGGCATTTGAAA+GGG + chr5_4:51932856-51932875 Msa0856920:CDS 30.0%
ATTAGATTGTCACGGTAAAA+AGG + chr5_4:51932886-51932905 Msa0856920:CDS 30.0%
TACAAAGTGGACAACATAAT+CGG + chr5_4:51932971-51932990 Msa0856920:CDS 30.0%
TGAAAGTGAAAGGAAAAAGT+TGG + chr5_4:51933535-51933554 Msa0856920:CDS 30.0%
! ATCCTTGTTTGGAGAAAAAA+GGG - chr5_4:51933739-51933758 None:intergenic 30.0%
!!! CTTTTGGTTTATAGATTCCT+CGG - chr5_4:51933766-51933785 None:intergenic 30.0%
!! TATCCAAAAGTGTTAATGTC+TGG + chr5_4:51934020-51934039 Msa0856920:intron 30.0%
! AATCCAGACATTAACACTTT+TGG - chr5_4:51934026-51934045 None:intergenic 30.0%
!! GATTAGTTCTGTTTATGGTT+CGG + chr5_4:51934042-51934061 Msa0856920:intron 30.0%
ACTGAACTGGCATATATATT+TGG - chr5_4:51934186-51934205 None:intergenic 30.0%
AAATATATATGCCAGTTCAG+TGG + chr5_4:51934185-51934204 Msa0856920:intron 30.0%
!!! TTTTTCAAGCTGGATGATTT+TGG - chr5_4:51934363-51934382 None:intergenic 30.0%
!!! CATTTAGTTGTTTTTCAAGC+TGG - chr5_4:51934373-51934392 None:intergenic 30.0%
TGTGAAACAAAAACTGGAAT+TGG + chr5_4:51934391-51934410 Msa0856920:CDS 30.0%
! ACTTGATGTTCTGAATATGA+TGG + chr5_4:51934472-51934491 Msa0856920:CDS 30.0%
! TTCTTCATAGCTTCTAGAAA+TGG - chr5_4:51934781-51934800 None:intergenic 30.0%
TGTATTAGAAAATTGACCGT+TGG + chr5_4:51934924-51934943 Msa0856920:intron 30.0%
ATTAATCTTGACGTACTTCA+GGG - chr5_4:51935018-51935037 None:intergenic 30.0%
GGAAATTGCATAGACAAAAA+AGG + chr5_4:51935451-51935470 Msa0856920:intron 30.0%
TATTCCATTAGAAACATACC+AGG - chr5_4:51935491-51935510 None:intergenic 30.0%
!! GAATTTTGAGAAAGGATTTG+TGG - chr5_4:51935587-51935606 None:intergenic 30.0%
TTAAGTCCTGTTTGGATAAT+CGG + chr5_4:51935630-51935649 Msa0856920:intron 30.0%
! ATTATACCGATTATCCAAAC+AGG - chr5_4:51935639-51935658 None:intergenic 30.0%
GATGAAAACAACTTATAGAC+AGG + chr5_4:51935807-51935826 Msa0856920:intron 30.0%
! AAGCATTTATGGGACTATTT+TGG - chr5_4:51935857-51935876 None:intergenic 30.0%
TCAAGTTAATCAATTAGGCA+GGG - chr5_4:51935936-51935955 None:intergenic 30.0%
ATCAAGTTAATCAATTAGGC+AGG - chr5_4:51935937-51935956 None:intergenic 30.0%
GTGCTTATGCTTATTCATTT+AGG + chr5_4:51936363-51936382 Msa0856920:CDS 30.0%
CTTATGCTTATTCATTTAGG+TGG + chr5_4:51936366-51936385 Msa0856920:CDS 30.0%
ATTTAGGGGCTTAAAAGTTT+AGG - chr5_4:51936406-51936425 None:intergenic 30.0%
ACGTTAGTGTACAAATTTAG+GGG - chr5_4:51936420-51936439 None:intergenic 30.0%
! CTTTTATGTATTCAACAAGG+TGG + chr5_4:51936506-51936525 Msa0856920:three_prime_UTR 30.0%
TGAAGTAGAGACATAATTTG+TGG + chr5_4:51936591-51936610 Msa0856920:three_prime_UTR 30.0%
! AAGAAGCTATGGAGTTTGTT+TGG - chr5_4:51928391-51928410 None:intergenic 35.0%
CAGTACTTTCAATCTCTTCA+AGG + chr5_4:51928442-51928461 Msa0856920:five_prime_UTR 35.0%
! CTTTGTTGGTTATGTGATGA+TGG + chr5_4:51928683-51928702 Msa0856920:intron 35.0%
TATAAGGACTTGTGGTATTC+AGG + chr5_4:51928815-51928834 Msa0856920:intron 35.0%
AATACCATTTGAGAGAGCTT+AGG - chr5_4:51928979-51928998 None:intergenic 35.0%
TAAGCTCTCTCAAATGGTAT+TGG + chr5_4:51928978-51928997 Msa0856920:intron 35.0%
CATTGTGAATTTCGCGTATA+CGG + chr5_4:51929120-51929139 Msa0856920:intron 35.0%
TAATCACATAGTTGTCGATC+TGG - chr5_4:51929362-51929381 None:intergenic 35.0%
TATAGGATTGCATTGGAGTA+TGG - chr5_4:51929510-51929529 None:intergenic 35.0%
!! CATAATATTGAGTTGAGCCT+AGG + chr5_4:51929683-51929702 Msa0856920:five_prime_UTR 35.0%
TCTTACGAAGAACTCAAAAC+AGG + chr5_4:51929784-51929803 Msa0856920:CDS 35.0%
CTTACGAAGAACTCAAAACA+GGG + chr5_4:51929785-51929804 Msa0856920:CDS 35.0%
ACTCAAAACAGGGAAACAAA+AGG + chr5_4:51929795-51929814 Msa0856920:CDS 35.0%
TTATAATCCTGTTTCCTCTC+GGG - chr5_4:51929859-51929878 None:intergenic 35.0%
CTTATAATCCTGTTTCCTCT+CGG - chr5_4:51929860-51929879 None:intergenic 35.0%
!! AAGAGAAGTGCTAAAGAGAA+GGG + chr5_4:51929931-51929950 Msa0856920:CDS 35.0%
TAAAGAGAAGGGTAGTCATT+TGG + chr5_4:51929942-51929961 Msa0856920:CDS 35.0%
CAAGATCTTAACAGTAAGGA+TGG + chr5_4:51929985-51930004 Msa0856920:CDS 35.0%
CCTTAAAACGACGACTAAAA+CGG - chr5_4:51930058-51930077 None:intergenic 35.0%
TGAGAAATTACTGTTTGTCC+TGG - chr5_4:51930214-51930233 None:intergenic 35.0%
TCAAGGATACCGATATAAGT+TGG + chr5_4:51930242-51930261 Msa0856920:CDS 35.0%
GCTTATGAAGAGCTCAAAAA+TGG + chr5_4:51930280-51930299 Msa0856920:CDS 35.0%
AAGAGCTCAAAAATGGAACT+CGG + chr5_4:51930287-51930306 Msa0856920:CDS 35.0%
! TGTTTTCTATTAGGGCAGTA+CGG - chr5_4:51930346-51930365 None:intergenic 35.0%
! ACTCCTAGAACATGCTTTTA+TGG + chr5_4:51930384-51930403 Msa0856920:CDS 35.0%
! CAACCATAAAAGCATGTTCT+AGG - chr5_4:51930390-51930409 None:intergenic 35.0%
! CTAGAACATGCTTTTATGGT+TGG + chr5_4:51930388-51930407 Msa0856920:CDS 35.0%
! AACATGCTTTTATGGTTGGT+CGG + chr5_4:51930392-51930411 Msa0856920:CDS 35.0%
ACATACAACCAACTTATTCG+AGG - chr5_4:51930986-51931005 None:intergenic 35.0%
!! TTTTTCATTTTCGGGCAGTA+TGG - chr5_4:51931079-51931098 None:intergenic 35.0%
!!! AGTCCGGTTTTTTCATTTTC+GGG - chr5_4:51931087-51931106 None:intergenic 35.0%
CATATGAACAGCTCAAAAAG+GGG + chr5_4:51931542-51931561 Msa0856920:CDS 35.0%
TAGAACTGACATTGAAAAGG+CGG + chr5_4:51931699-51931718 Msa0856920:CDS 35.0%
AAGGATCTTATAAATGTCGG+TGG + chr5_4:51931751-51931770 Msa0856920:CDS 35.0%
GAGTAGGTAATTGGAAAGAA+AGG - chr5_4:51931849-51931868 None:intergenic 35.0%
CAATGACACCCTTAACTATT+TGG + chr5_4:51931965-51931984 Msa0856920:intron 35.0%
TGAGTGAGAAATAAGTGGAA+TGG + chr5_4:51931991-51932010 Msa0856920:intron 35.0%
GAGTGAGAAATAAGTGGAAT+GGG + chr5_4:51931992-51932011 Msa0856920:intron 35.0%
ATCCTATACAGAACTCAAGA+AGG + chr5_4:51932313-51932332 Msa0856920:CDS 35.0%
TCCTATACAGAACTCAAGAA+GGG + chr5_4:51932314-51932333 Msa0856920:CDS 35.0%
GAACTCCTTAATCATGCTTT+AGG + chr5_4:51932416-51932435 Msa0856920:CDS 35.0%
ACTCCTTAATCATGCTTTAG+GGG + chr5_4:51932418-51932437 Msa0856920:CDS 35.0%
TTTCACTAAAGCTAGATGGT+TGG - chr5_4:51932486-51932505 None:intergenic 35.0%
GGATCTTATGACTATGAATG+TGG + chr5_4:51932517-51932536 Msa0856920:CDS 35.0%
! ATTCTGAAAGGCAGTTTGTA+TGG + chr5_4:51932636-51932655 Msa0856920:CDS 35.0%
TAAGGGATGAATACCGAATA+AGG + chr5_4:51932738-51932757 Msa0856920:CDS 35.0%
AAGGGATGAATACCGAATAA+GGG + chr5_4:51932739-51932758 Msa0856920:CDS 35.0%
! GTGGATTAAAACCCCTTATT+CGG - chr5_4:51932754-51932773 None:intergenic 35.0%
GCTAGGGTTATATAATGCAT+TGG + chr5_4:51932844-51932863 Msa0856920:CDS 35.0%
GCGTATGAATTAGATTGTCA+CGG + chr5_4:51932878-51932897 Msa0856920:CDS 35.0%
ACAAAGTGGACAACATAATC+GGG + chr5_4:51932972-51932991 Msa0856920:CDS 35.0%
CAATGAAATTACACTTCGCA+TGG + chr5_4:51933135-51933154 Msa0856920:CDS 35.0%
!! CACTTTCAGAGTGTTTTGAA+TGG + chr5_4:51933425-51933444 Msa0856920:CDS 35.0%
!! GTGTTTTGAATGGTCATGAA+AGG + chr5_4:51933435-51933454 Msa0856920:CDS 35.0%
AATTGAACTGGAAAAACGTG+AGG + chr5_4:51933505-51933524 Msa0856920:CDS 35.0%
GTTGGATGAAGAGATTAACA+AGG + chr5_4:51933553-51933572 Msa0856920:CDS 35.0%
CACTTTGATCTTCATTTCAC+AGG - chr5_4:51933632-51933651 None:intergenic 35.0%
!!! TTCCCTTTTTTCTCCAAACA+AGG + chr5_4:51933734-51933753 Msa0856920:intron 35.0%
! GATCCTTGTTTGGAGAAAAA+AGG - chr5_4:51933740-51933759 None:intergenic 35.0%
!! GTCTGGATTAGTTCTGTTTA+TGG + chr5_4:51934037-51934056 Msa0856920:intron 35.0%
AAACTGATCCGAACCATATT+CGG + chr5_4:51934096-51934115 Msa0856920:intron 35.0%
CAAGTTTACCGAATATGGTT+CGG - chr5_4:51934107-51934126 None:intergenic 35.0%
! TGGTTCAAGTTTACCGAATA+TGG - chr5_4:51934112-51934131 None:intergenic 35.0%
! CTGAACCAAAACTACCTTTT+CGG + chr5_4:51934210-51934229 Msa0856920:intron 35.0%
TTCGGTTTAACGGTTTGATT+CGG + chr5_4:51934238-51934257 Msa0856920:intron 35.0%
!!! TAACGGTTTGATTCGGTTTT+TGG + chr5_4:51934245-51934264 Msa0856920:intron 35.0%
TTGACTATCTGTTTATCCAG+CGG + chr5_4:51934318-51934337 Msa0856920:intron 35.0%
TTGGAGATTCAGCAACTAAA+AGG + chr5_4:51934410-51934429 Msa0856920:CDS 35.0%
ACTAAATGTCATGAAGCACA+TGG + chr5_4:51934436-51934455 Msa0856920:CDS 35.0%
GCTCTTTAATGATCAGAGTT+TGG - chr5_4:51934559-51934578 None:intergenic 35.0%
ACAACTTGGCATCTCTTTAA+TGG - chr5_4:51934716-51934735 None:intergenic 35.0%
CATTCTCTTCACACGAATAT+CGG - chr5_4:51934740-51934759 None:intergenic 35.0%
GATATTCGTGTGAAGAGAAT+GGG + chr5_4:51934739-51934758 Msa0856920:CDS 35.0%
ATATTCGTGTGAAGAGAATG+GGG + chr5_4:51934740-51934759 Msa0856920:CDS 35.0%
! TTTTAAATGGATGCCAGTCA+GGG - chr5_4:51934876-51934895 None:intergenic 35.0%
! ATTTTAAATGGATGCCAGTC+AGG - chr5_4:51934877-51934896 None:intergenic 35.0%
TTAATCTTGACGTACTTCAG+GGG - chr5_4:51935017-51935036 None:intergenic 35.0%
CATTAATCTTGACGTACTTC+AGG - chr5_4:51935019-51935038 None:intergenic 35.0%
GAGCAAATTGATCTACACAA+TGG + chr5_4:51935128-51935147 Msa0856920:intron 35.0%
! ATTCAAAGAAAGCACGAAGA+AGG - chr5_4:51935224-51935243 None:intergenic 35.0%
TCGTGCTTTCTTTGAATTTC+AGG + chr5_4:51935227-51935246 Msa0856920:intron 35.0%
AATGAACTGAGAAACGAGAT+GGG + chr5_4:51935279-51935298 Msa0856920:CDS 35.0%
ATGAATATAATCCAAGTGGG+CGG + chr5_4:51935346-51935365 Msa0856920:CDS 35.0%
GAATTATGGAATTACGCAGA+GGG + chr5_4:51935381-51935400 Msa0856920:CDS 35.0%
!!! TGCGAGTTTTATTAAAGCAG+TGG + chr5_4:51935430-51935449 Msa0856920:intron 35.0%
CACAACATTTAAGTCCTGTT+TGG + chr5_4:51935622-51935641 Msa0856920:intron 35.0%
AAGCTATCCTGAAAAGCTTA+TGG + chr5_4:51935777-51935796 Msa0856920:intron 35.0%
AGTCAATCCAAGCATATCTT+TGG + chr5_4:51935900-51935919 Msa0856920:intron 35.0%
CAAGTTAATCAATTAGGCAG+GGG - chr5_4:51935935-51935954 None:intergenic 35.0%
CGTCAAACTAAGGTTCAATT+TGG + chr5_4:51936096-51936115 Msa0856920:intron 35.0%
! ATCACACATTGTTTTCTCGA+AGG + chr5_4:51936227-51936246 Msa0856920:CDS 35.0%
! TCACACATTGTTTTCTCGAA+GGG + chr5_4:51936228-51936247 Msa0856920:CDS 35.0%
! TCGAACATTTTCTTTTGTGG+TGG + chr5_4:51936565-51936584 Msa0856920:three_prime_UTR 35.0%
! AGTAGAGACATAATTTGTGG+TGG + chr5_4:51936594-51936613 Msa0856920:three_prime_UTR 35.0%
GTTTCCTAAGCTCTCTCAAA+TGG + chr5_4:51928972-51928991 Msa0856920:intron 40.0%
GATGTGTACAGTCCACATTT+CGG + chr5_4:51929273-51929292 Msa0856920:intron 40.0%
GAATAACCAAAGCCGAAATG+TGG - chr5_4:51929288-51929307 None:intergenic 40.0%
! TTGTTTAGGTGCTACATCAC+AGG - chr5_4:51929629-51929648 None:intergenic 40.0%
TATCAAGGATACCGGTATAG+CGG + chr5_4:51929729-51929748 Msa0856920:CDS 40.0%
TATAATCCTGTTTCCTCTCG+GGG - chr5_4:51929858-51929877 None:intergenic 40.0%
!! GAAGAGAAGTGCTAAAGAGA+AGG + chr5_4:51929930-51929949 Msa0856920:CDS 40.0%
GGAGCAAGATCTTAACAGTA+AGG + chr5_4:51929981-51930000 Msa0856920:CDS 40.0%
GCATCGAGATCTATAGATCA+AGG + chr5_4:51930009-51930028 Msa0856920:CDS 40.0%
!! CCGTTTTAGTCGTCGTTTTA+AGG + chr5_4:51930055-51930074 Msa0856920:intron 40.0%
TATTTGCCTGGTAAATCAGC+AGG + chr5_4:51930134-51930153 Msa0856920:intron 40.0%
GTTACGAACACAATAAGTCC+AGG + chr5_4:51930193-51930212 Msa0856920:intron 40.0%
! AGGATACCGATATAAGTTGG+TGG + chr5_4:51930245-51930264 Msa0856920:CDS 40.0%
! GTTTTCTATTAGGGCAGTAC+GGG - chr5_4:51930345-51930364 None:intergenic 40.0%
GTACTGCCCTAATAGAAAAC+AGG + chr5_4:51930345-51930364 Msa0856920:CDS 40.0%
AAGGATATTACGAGTATGCC+TGG + chr5_4:51930481-51930500 Msa0856920:CDS 40.0%
! CCTTTATCAACAGGCTTTGA+CGG - chr5_4:51930508-51930527 None:intergenic 40.0%
TCAGGATCACCTTTATCAAC+AGG - chr5_4:51930517-51930536 None:intergenic 40.0%
TCTATTACTAGCGTGCAAAC+AGG - chr5_4:51930831-51930850 None:intergenic 40.0%
AAGTCAAGGACAAACTGTCA+CGG + chr5_4:51930925-51930944 Msa0856920:CDS 40.0%
CAAGTGATCCTCGAATAAGT+TGG + chr5_4:51930975-51930994 Msa0856920:CDS 40.0%
CAAAGTGAGAATCTCAGATG+AGG + chr5_4:51931042-51931061 Msa0856920:CDS 40.0%
CTGCCCGAAAATGAAAAAAC+CGG + chr5_4:51931081-51931100 Msa0856920:CDS 40.0%
AAAAACCGGACTATGTGTAC+AGG + chr5_4:51931095-51931114 Msa0856920:CDS 40.0%
AAAACCGGACTATGTGTACA+GGG + chr5_4:51931096-51931115 Msa0856920:CDS 40.0%
ATTTCCCTGTACACATAGTC+CGG - chr5_4:51931103-51931122 None:intergenic 40.0%
AAATCCTTGAACACGCTTCT+GGG + chr5_4:51931119-51931138 Msa0856920:CDS 40.0%
!! AAAGAGAGGTATCAGAGAGA+AGG + chr5_4:51931162-51931181 Msa0856920:CDS 40.0%
!! CCTTCAATCACAGGTTTTGA+TGG - chr5_4:51931244-51931263 None:intergenic 40.0%
CCATCAAAACCTGTGATTGA+AGG + chr5_4:51931241-51931260 Msa0856920:CDS 40.0%
GAAGAATCACCTTCAATCAC+AGG - chr5_4:51931253-51931272 None:intergenic 40.0%
GTGATTGAAGGTGATTCTTC+TGG + chr5_4:51931253-51931272 Msa0856920:CDS 40.0%
TTTGGTCAAAGTAACGTGCA+AGG + chr5_4:51931361-51931380 Msa0856920:intron 40.0%
! TTCTTCTCGGCTTTGTATCA+TGG - chr5_4:51931446-51931465 None:intergenic 40.0%
! GCAAGTGAAAGTCTTATCTG+AGG - chr5_4:51931584-51931603 None:intergenic 40.0%
TAAAACGGGATTACGTGTAC+AGG + chr5_4:51931629-51931648 Msa0856920:CDS 40.0%
AAAACGGGATTACGTGTACA+GGG + chr5_4:51931630-51931649 Msa0856920:CDS 40.0%
GAAATCCTTGAACATGCTTC+CGG + chr5_4:51931652-51931671 Msa0856920:CDS 40.0%
AAATCCTTGAACATGCTTCC+GGG + chr5_4:51931653-51931672 Msa0856920:CDS 40.0%
GAGATATCACCTTTCTTCGT+TGG - chr5_4:51931787-51931806 None:intergenic 40.0%
GATTAGAGGGAGTAGGTAAT+TGG - chr5_4:51931858-51931877 None:intergenic 40.0%
ACTCAGCGCCAAATAGTTAA+GGG - chr5_4:51931976-51931995 None:intergenic 40.0%
AGGGAATGATATGCAGACAT+TGG + chr5_4:51932103-51932122 Msa0856920:intron 40.0%
GGTGCCTGCAAAACAAAATA+AGG - chr5_4:51932198-51932217 None:intergenic 40.0%
TACTCCTCGGTTCAACATTA+TGG - chr5_4:51932219-51932238 None:intergenic 40.0%
TATTAGCATCCTTCTCAGAG+AGG - chr5_4:51932256-51932275 None:intergenic 40.0%
ACCCTTCTTGAGTTCTGTAT+AGG - chr5_4:51932318-51932337 None:intergenic 40.0%
!! ACTCAAGAAGGGTATTCACA+AGG + chr5_4:51932325-51932344 Msa0856920:CDS 40.0%
! CATTTTCTCTTGGGGCAATA+CGG - chr5_4:51932380-51932399 None:intergenic 40.0%
CTACCCCTAAAGCATGATTA+AGG - chr5_4:51932424-51932443 None:intergenic 40.0%
!! CTTAATCATGCTTTAGGGGT+AGG + chr5_4:51932422-51932441 Msa0856920:CDS 40.0%
! AAGGAGAAGTGTATTGGAGA+AGG + chr5_4:51932460-51932479 Msa0856920:CDS 40.0%
ACCAATACATCGTCCATCTT+CGG - chr5_4:51932702-51932721 None:intergenic 40.0%
TGAAAGTGGTTCCAAGCTAA+GGG + chr5_4:51932721-51932740 Msa0856920:CDS 40.0%
AGGGATGAATACCGAATAAG+GGG + chr5_4:51932740-51932759 Msa0856920:CDS 40.0%
!! TCCGAACTCTTTGGAATTCA+TGG + chr5_4:51932780-51932799 Msa0856920:CDS 40.0%
CCCATGAATTCCAAAGAGTT+CGG - chr5_4:51932784-51932803 None:intergenic 40.0%
!! CCGAACTCTTTGGAATTCAT+GGG + chr5_4:51932781-51932800 Msa0856920:CDS 40.0%
!! CGAACTCTTTGGAATTCATG+GGG + chr5_4:51932782-51932801 Msa0856920:CDS 40.0%
ATTGTCACGGTAAAAAGGAC+TGG + chr5_4:51932891-51932910 Msa0856920:CDS 40.0%
AAAAATCCGGTCTTTATGCG+TGG + chr5_4:51932930-51932949 Msa0856920:CDS 40.0%
AAAATCCGGTCTTTATGCGT+GGG + chr5_4:51932931-51932950 Msa0856920:CDS 40.0%
CAAAGTGGACAACATAATCG+GGG + chr5_4:51932973-51932992 Msa0856920:CDS 40.0%
! TGAAAGGCTTAAGTTGCAAC+TGG + chr5_4:51933451-51933470 Msa0856920:CDS 40.0%
TGAGTTGCGAAGAATTGAAC+TGG + chr5_4:51933493-51933512 Msa0856920:CDS 40.0%
AGGCACGTAATGAAAGTGAA+AGG + chr5_4:51933525-51933544 Msa0856920:CDS 40.0%
CTTTCTTCAAATGGCTGCTT+TGG + chr5_4:51933916-51933935 Msa0856920:CDS 40.0%
! TATACGGACCTTTTGATCTG+CGG - chr5_4:51933978-51933997 None:intergenic 40.0%
!! TTCTGTTTATGGTTCGGTTC+AGG + chr5_4:51934048-51934067 Msa0856920:intron 40.0%
AAACTTGAACCAAACCGTTG+AGG + chr5_4:51934120-51934139 Msa0856920:intron 40.0%
AACTTGAACCAAACCGTTGA+GGG + chr5_4:51934121-51934140 Msa0856920:intron 40.0%
CAGTTCAGCGTATACCAATT+GGG - chr5_4:51934158-51934177 None:intergenic 40.0%
TCAGTTCAGCGTATACCAAT+TGG - chr5_4:51934159-51934178 None:intergenic 40.0%
AGTCTTAGTCAGCATCAAAG+TGG + chr5_4:51934278-51934297 Msa0856920:intron 40.0%
TCAAAGTGGCAAGCTGATAA+TGG + chr5_4:51934292-51934311 Msa0856920:intron 40.0%
ATGAAGCACATGGAAGATGA+TGG + chr5_4:51934446-51934465 Msa0856920:CDS 40.0%
TAAGAGCAATGATGAACTGC+AGG + chr5_4:51934580-51934599 Msa0856920:CDS 40.0%
CCAAGAGTTTAAAAGATGCG+AGG - chr5_4:51934675-51934694 None:intergenic 40.0%
! CCTCGCATCTTTTAAACTCT+TGG + chr5_4:51934672-51934691 Msa0856920:intron 40.0%
CGATATTCGTGTGAAGAGAA+TGG + chr5_4:51934738-51934757 Msa0856920:CDS 40.0%
TATTCGTGTGAAGAGAATGG+GGG + chr5_4:51934741-51934760 Msa0856920:CDS 40.0%
TTCTGAACTGTGTTCGTTGT+GGG + chr5_4:51934834-51934853 Msa0856920:CDS 40.0%
TACAATCCAAGGGAAACATC+AGG + chr5_4:51934900-51934919 Msa0856920:CDS 40.0%
ATACAACCTGATGTTTCCCT+TGG - chr5_4:51934909-51934928 None:intergenic 40.0%
! CATGAGGTACGTCAAGTTTT+AGG - chr5_4:51935065-51935084 None:intergenic 40.0%
!!! CAAACTCGTGCTACTTGTTT+TGG + chr5_4:51935089-51935108 Msa0856920:intron 40.0%
CGAAGAAGGTAAGTTTCACT+AGG - chr5_4:51935210-51935229 None:intergenic 40.0%
GAATGAACTGAGAAACGAGA+TGG + chr5_4:51935278-51935297 Msa0856920:CDS 40.0%
CGAAGAAGTTTACAAAGCTG+TGG + chr5_4:51935302-51935321 Msa0856920:CDS 40.0%
AGAAGTTTACAAAGCTGTGG+TGG + chr5_4:51935305-51935324 Msa0856920:CDS 40.0%
GGTACATAACCTCGGAATTA+TGG + chr5_4:51935367-51935386 Msa0856920:CDS 40.0%
TGCGTAATTCCATAATTCCG+AGG - chr5_4:51935379-51935398 None:intergenic 40.0%
GGAATTATGGAATTACGCAG+AGG + chr5_4:51935380-51935399 Msa0856920:CDS 40.0%
! GAAGCCTGGTATGTTTCTAA+TGG + chr5_4:51935484-51935503 Msa0856920:intron 40.0%
!! GGACTATTTTGGAGAGCTAA+TGG - chr5_4:51935846-51935865 None:intergenic 40.0%
TCGTGCGGTTGAACATATTT+AGG + chr5_4:51936253-51936272 Msa0856920:CDS 40.0%
CTTGATACTTCAAGCTTCTG+TGG + chr5_4:51936300-51936319 Msa0856920:CDS 40.0%
AAGCATAAGCACAAAGCTTG+TGG - chr5_4:51936355-51936374 None:intergenic 40.0%
! AGAGACATAATTTGTGGTGG+TGG + chr5_4:51936597-51936616 Msa0856920:three_prime_UTR 40.0%
TGTGGTATTCAGGCCCAATT+TGG + chr5_4:51928825-51928844 Msa0856920:intron 45.0%
TACAGTCCACATTTCGGCTT+TGG + chr5_4:51929279-51929298 Msa0856920:intron 45.0%
TGAGCCTAGGAGAAACTCTA+TGG + chr5_4:51929696-51929715 Msa0856920:exon 45.0%
TGAGCCATAGAGTTTCTCCT+AGG - chr5_4:51929703-51929722 None:intergenic 45.0%
TATGGCTCACTGCTCTATCA+AGG + chr5_4:51929714-51929733 Msa0856920:exon 45.0%
CACTGCTCTATCAAGGATAC+CGG + chr5_4:51929721-51929740 Msa0856920:CDS 45.0%
GAGATACCACCAACTCAACT+GGG - chr5_4:51929758-51929777 None:intergenic 45.0%
GTACGGACAACTGAAACTCT+CGG - chr5_4:51929833-51929852 None:intergenic 45.0%
! GAAGGGTAGTCATTTGGCTT+TGG + chr5_4:51929948-51929967 Msa0856920:CDS 45.0%
!! TGTTGTCCTGCTGATTTACC+AGG - chr5_4:51930143-51930162 None:intergenic 45.0%
CGGAATGTGAAAACCTCAGA+CGG + chr5_4:51930307-51930326 Msa0856920:CDS 45.0%
GGAATGTGAAAACCTCAGAC+GGG + chr5_4:51930308-51930327 Msa0856920:CDS 45.0%
! CCGTCAAAGCCTGTTGATAA+AGG + chr5_4:51930505-51930524 Msa0856920:CDS 45.0%
ATATCGCAAACAGCAGGATC+AGG - chr5_4:51930535-51930554 None:intergenic 45.0%
TGTGGTATATCGCAAACAGC+AGG - chr5_4:51930541-51930560 None:intergenic 45.0%
CCAGTATCCTTGTTAGAGCA+TGG - chr5_4:51930953-51930972 None:intergenic 45.0%
CCATGCTCTAACAAGGATAC+TGG + chr5_4:51930950-51930969 Msa0856920:CDS 45.0%
GAAATCCTTGAACACGCTTC+TGG + chr5_4:51931118-51931137 Msa0856920:CDS 45.0%
AATCCTTGAACACGCTTCTG+GGG + chr5_4:51931120-51931139 Msa0856920:CDS 45.0%
CAGAGTAGTTCGCAAAAGAG+AGG + chr5_4:51931148-51931167 Msa0856920:CDS 45.0%
!! ATCACAGGTTTTGATGGAGC+AGG - chr5_4:51931238-51931257 None:intergenic 45.0%
! GAGTCGTCGCATTTTCTTCT+CGG - chr5_4:51931459-51931478 None:intergenic 45.0%
AATCCTTGAACATGCTTCCG+GGG + chr5_4:51931654-51931673 Msa0856920:CDS 45.0%
CATTGAAAAGGCGGATCATC+TGG + chr5_4:51931708-51931727 Msa0856920:CDS 45.0%
!! CCTTTCTTCGTTGGTTCTGA+AGG - chr5_4:51931778-51931797 None:intergenic 45.0%
CCTTCAGAACCAACGAAGAA+AGG + chr5_4:51931775-51931794 Msa0856920:CDS 45.0%
CACTCAGCGCCAAATAGTTA+AGG - chr5_4:51931977-51931996 None:intergenic 45.0%
AACCGAGGAGTAACTGTAAC+AGG + chr5_4:51932227-51932246 Msa0856920:CDS 45.0%
GACCTGTTACAGTTACTCCT+CGG - chr5_4:51932232-51932251 None:intergenic 45.0%
TAGGTCAAAGTGACGCACAA+AGG + chr5_4:51932441-51932460 Msa0856920:CDS 45.0%
! CGCACAAAGGAGAAGTGTAT+TGG + chr5_4:51932454-51932473 Msa0856920:CDS 45.0%
AAAGGCAGTTTGTATGGCCA+TGG + chr5_4:51932642-51932661 Msa0856920:CDS 45.0%
AGTTTGTATGGCCATGGACT+GGG + chr5_4:51932648-51932667 Msa0856920:CDS 45.0%
TTAACCACAATCCCAGTCCA+TGG - chr5_4:51932662-51932681 None:intergenic 45.0%
TACATCGTCCATCTTCGGTT+TGG - chr5_4:51932697-51932716 None:intergenic 45.0%
ACCGAAGATGGACGATGTAT+TGG + chr5_4:51932698-51932717 Msa0856920:CDS 45.0%
! GGACGATGTATTGGTGAAAG+TGG + chr5_4:51932707-51932726 Msa0856920:CDS 45.0%
GTGAAAGTGGTTCCAAGCTA+AGG + chr5_4:51932720-51932739 Msa0856920:CDS 45.0%
TCGGTATTCATCCCTTAGCT+TGG - chr5_4:51932735-51932754 None:intergenic 45.0%
AAATTCCACAACTGCAGCTC+CGG - chr5_4:51932813-51932832 None:intergenic 45.0%
CACTTTGTAGTCATCAGCTC+GGG - chr5_4:51932960-51932979 None:intergenic 45.0%
CCACTTTGTAGTCATCAGCT+CGG - chr5_4:51932961-51932980 None:intergenic 45.0%
GCATCTTGCTCCATGATTTC+AGG - chr5_4:51933031-51933050 None:intergenic 45.0%
TCATGGAGCAAGATGCTAGA+AGG + chr5_4:51933035-51933054 Msa0856920:CDS 45.0%
ACTTCGCATGGACATTGTGA+TGG + chr5_4:51933147-51933166 Msa0856920:CDS 45.0%
CTTCGCATGGACATTGTGAT+GGG + chr5_4:51933148-51933167 Msa0856920:CDS 45.0%
CTTGCTCAATCTCACAGTCA+AGG + chr5_4:51933184-51933203 Msa0856920:CDS 45.0%
!! GCTTTGGAGCAACAAAAAGC+TGG + chr5_4:51933932-51933951 Msa0856920:CDS 45.0%
GAAACTTGCCGCAGATCAAA+AGG + chr5_4:51933967-51933986 Msa0856920:CDS 45.0%
!! GTTTATGGTTCGGTTCAGGA+AGG + chr5_4:51934052-51934071 Msa0856920:intron 45.0%
AAGGAAAACCGAACCGCATT+CGG + chr5_4:51934071-51934090 Msa0856920:intron 45.0%
! CAGTTTTACCGAATGCGGTT+CGG - chr5_4:51934082-51934101 None:intergenic 45.0%
! CGGATCAGTTTTACCGAATG+CGG - chr5_4:51934087-51934106 None:intergenic 45.0%
TTGGTTCAGAACCACTGAAC+TGG - chr5_4:51934199-51934218 None:intergenic 45.0%
!! CAAGCTGGATGATTTTGGCA+TGG - chr5_4:51934358-51934377 None:intergenic 45.0%
ACACGAATATCGGCACAACT+TGG - chr5_4:51934730-51934749 None:intergenic 45.0%
CTTCTGAACTGTGTTCGTTG+TGG + chr5_4:51934833-51934852 Msa0856920:CDS 45.0%
AGCACGAGTTTGACAACATG+AGG - chr5_4:51935081-51935100 None:intergenic 45.0%
AAGAGAGCGACTTTGCAAGA+AGG + chr5_4:51935405-51935424 Msa0856920:CDS 45.0%
AAGGGGAATGATATGAAGCC+TGG + chr5_4:51935470-51935489 Msa0856920:intron 45.0%
CTGTGGATCATGTTCCTGAA+AGG + chr5_4:51936183-51936202 Msa0856920:intron 45.0%
GGATCATGTTCCTGAAAGGT+TGG + chr5_4:51936187-51936206 Msa0856920:intron 45.0%
!! TGTTCCTGAAAGGTTGGTGT+TGG + chr5_4:51936193-51936212 Msa0856920:intron 45.0%
! TTTTCTCGAAGGGAATCGTG+CGG + chr5_4:51936238-51936257 Msa0856920:CDS 45.0%
GATACTTCAAGCTTCTGTGG+AGG + chr5_4:51936303-51936322 Msa0856920:CDS 45.0%
!! AAATAAAAAGTTTAAATTAA+GGG - chr5_4:51930704-51930723 None:intergenic 5.0%
!! AAAATAAAAAGTTTAAATTA+AGG - chr5_4:51930705-51930724 None:intergenic 5.0%
CAACTGGGATTCCGCTATAC+CGG - chr5_4:51929743-51929762 None:intergenic 50.0%
TAGCGGAATCCCAGTTGAGT+TGG + chr5_4:51929746-51929765 Msa0856920:CDS 50.0%
CGAGATACCACCAACTCAAC+TGG - chr5_4:51929759-51929778 None:intergenic 50.0%
GAACTCCTGAATCATGCCAC+CGG + chr5_4:51929886-51929905 Msa0856920:CDS 50.0%
AACTCCTGAATCATGCCACC+GGG + chr5_4:51929887-51929906 Msa0856920:CDS 50.0%
TGAACTACTCCGACCAATCC+CGG - chr5_4:51929908-51929927 None:intergenic 50.0%
GCATATGAAAGTCCCGTCTG+AGG - chr5_4:51930323-51930342 None:intergenic 50.0%
CAGAGAGAAGGCAACTCATC+TGG + chr5_4:51931174-51931193 Msa0856920:CDS 50.0%
! AAAGGCGGATCATCTGGCTT+TGG + chr5_4:51931714-51931733 Msa0856920:CDS 50.0%
! GGCGCTGAGTGAGAAATAAG+TGG + chr5_4:51931986-51932005 Msa0856920:intron 50.0%
GGCACCATAATGTTGAACCG+AGG + chr5_4:51932212-51932231 Msa0856920:intron 50.0%
! AACAGGTCACCTCTCTGAGA+AGG + chr5_4:51932244-51932263 Msa0856920:CDS 50.0%
CAGTTTGTATGGCCATGGAC+TGG + chr5_4:51932647-51932666 Msa0856920:CDS 50.0%
!! CCATCTTCGGTTTGGCTAGT+GGG - chr5_4:51932689-51932708 None:intergenic 50.0%
!! TCCATCTTCGGTTTGGCTAG+TGG - chr5_4:51932690-51932709 None:intergenic 50.0%
CAAAGAGTTCGGACTCTACG+TGG - chr5_4:51932773-51932792 None:intergenic 50.0%
CACGTAGAGTCCGAACTCTT+TGG + chr5_4:51932771-51932790 Msa0856920:CDS 50.0%
TGGAATTCATGGGGTCACAC+CGG + chr5_4:51932791-51932810 Msa0856920:CDS 50.0%
CCGAGCTGATGACTACAAAG+TGG + chr5_4:51932958-51932977 Msa0856920:CDS 50.0%
CGGGGAGCAACTACAAAAGA+TGG + chr5_4:51932991-51933010 Msa0856920:CDS 50.0%
TCCAAACAAGGATCTTGCCG+AGG + chr5_4:51933746-51933765 Msa0856920:intron 50.0%
TCCTCGGCAAGATCCTTGTT+TGG - chr5_4:51933750-51933769 None:intergenic 50.0%
AAACCGTTGAGGGTTTCTCC+CGG + chr5_4:51934131-51934150 Msa0856920:intron 50.0%
AGCGTATACCAATTGGGTCC+GGG - chr5_4:51934152-51934171 None:intergenic 50.0%
CAGCGTATACCAATTGGGTC+CGG - chr5_4:51934153-51934172 None:intergenic 50.0%
! CCACGCCGAAAAGGTAGTTT+TGG - chr5_4:51934218-51934237 None:intergenic 50.0%
! CCAAAACTACCTTTTCGGCG+TGG + chr5_4:51934215-51934234 Msa0856920:intron 50.0%
! ACTACCTTTTCGGCGTGGTT+CGG + chr5_4:51934220-51934239 Msa0856920:intron 50.0%
TAAACCGAACCACGCCGAAA+AGG - chr5_4:51934227-51934246 None:intergenic 50.0%
!! TTCGGCGTGGTTCGGTTTAA+CGG + chr5_4:51934228-51934247 Msa0856920:intron 50.0%
! GGAGTTGTTCTTTTTGCCGC+TGG - chr5_4:51934337-51934356 None:intergenic 50.0%
GGAACAGTCACTTCGAGACA+TGG + chr5_4:51934523-51934542 Msa0856920:CDS 50.0%
TGAACTGCAGGAAGCTCGAA+AGG + chr5_4:51934592-51934611 Msa0856920:CDS 50.0%
!! GTTGTGGGAAGAGTACCTGA+AGG + chr5_4:51934849-51934868 Msa0856920:CDS 50.0%
AAGTGGGCGGTACATAACCT+CGG + chr5_4:51935359-51935378 Msa0856920:CDS 50.0%
!! CGGAATCCCAGTTGAGTTGG+TGG + chr5_4:51929749-51929768 Msa0856920:CDS 55.0%
ACAACTGAAACTCTCGGCCG+AGG - chr5_4:51929827-51929846 None:intergenic 55.0%
TGTTTCCTCTCGGGGCAGTA+CGG - chr5_4:51929850-51929869 None:intergenic 55.0%
CAATCCCGGTGGCATGATTC+AGG - chr5_4:51929894-51929913 None:intergenic 55.0%
CTGAATCATGCCACCGGGAT+TGG + chr5_4:51929892-51929911 Msa0856920:CDS 55.0%
! ATCATGCCACCGGGATTGGT+CGG + chr5_4:51929896-51929915 Msa0856920:CDS 55.0%
! TCAACAGGCTTTGACGGTCC+AGG - chr5_4:51930502-51930521 None:intergenic 55.0%
CACGGCTCCATGCTCTAACA+AGG + chr5_4:51930943-51930962 Msa0856920:CDS 55.0%
!! CTTGAACACGCTTCTGGGGT+CGG + chr5_4:51931124-51931143 Msa0856920:CDS 55.0%
CTTGAACATGCTTCCGGGGT+GGG + chr5_4:51931658-51931677 Msa0856920:CDS 55.0%
TGAGATACTCCAACCCACCC+CGG - chr5_4:51931674-51931693 None:intergenic 55.0%
!! ATGGCCATGGACTGGGATTG+TGG + chr5_4:51932655-51932674 Msa0856920:CDS 55.0%
CCCACTAGCCAAACCGAAGA+TGG + chr5_4:51932686-51932705 Msa0856920:CDS 55.0%
GGCAACCCACGCATAAAGAC+CGG - chr5_4:51932939-51932958 None:intergenic 55.0%
GGGAGAAACCCTCAACGGTT+TGG - chr5_4:51934132-51934151 None:intergenic 55.0%
AGTACCTGAAGGACCCTGAC+TGG + chr5_4:51934860-51934879 Msa0856920:CDS 55.0%
GAGGTTATGTACCGCCCACT+TGG - chr5_4:51935360-51935379 None:intergenic 55.0%
GCAGCCAACACCAACCTTTC+AGG - chr5_4:51936200-51936219 None:intergenic 55.0%
!! GAAAGGTTGGTGTTGGCTGC+AGG + chr5_4:51936200-51936219 Msa0856920:intron 55.0%
GTACTGCCCCGAGAGGAAAC+AGG + chr5_4:51929849-51929868 Msa0856920:CDS 60.0%
ACTACTCCGACCAATCCCGG+TGG - chr5_4:51929905-51929924 None:intergenic 60.0%
! CGACCCCAGAAGCGTGTTCA+AGG - chr5_4:51931126-51931145 None:intergenic 60.0%
! CCACCCCGGAAGCATGTTCA+AGG - chr5_4:51931660-51931679 None:intergenic 60.0%
CCTTGAACATGCTTCCGGGG+TGG + chr5_4:51931657-51931676 Msa0856920:CDS 60.0%
AACATGCTTCCGGGGTGGGT+TGG + chr5_4:51931662-51931681 Msa0856920:CDS 60.0%
TCACACCGGAGCTGCAGTTG+TGG + chr5_4:51932805-51932824 Msa0856920:CDS 60.0%
GGTCCGGGAGAAACCCTCAA+CGG - chr5_4:51934137-51934156 None:intergenic 60.0%
GGGTTTCTCCCGGACCCAAT+TGG + chr5_4:51934141-51934160 Msa0856920:intron 60.0%
GATGCCAGTCAGGGTCCTTC+AGG - chr5_4:51934867-51934886 None:intergenic 60.0%
GTTGTCCGTACTGCCCCGAG+AGG + chr5_4:51929842-51929861 Msa0856920:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 51928324 51936668 51928324 ID=Msa0856920;Name=Msa0856920
chr5_4 mRNA 51928324 51936668 51928324 ID=Msa0856920-mRNA-1;Parent=Msa0856920;Name=Msa0856920-mRNA-1;_AED=0.05;_eAED=0.05;_QI=176|0.81|0.83|1|0.90|0.83|12|267|1180
chr5_4 exon 51928324 51928463 51928324 ID=Msa0856920-mRNA-1:exon:16211;Parent=Msa0856920-mRNA-1
chr5_4 exon 51929679 51930030 51929679 ID=Msa0856920-mRNA-1:exon:16212;Parent=Msa0856920-mRNA-1
chr5_4 exon 51930194 51930577 51930194 ID=Msa0856920-mRNA-1:exon:16213;Parent=Msa0856920-mRNA-1
chr5_4 exon 51930912 51931274 51930912 ID=Msa0856920-mRNA-1:exon:16214;Parent=Msa0856920-mRNA-1
chr5_4 exon 51931440 51931796 51931440 ID=Msa0856920-mRNA-1:exon:16215;Parent=Msa0856920-mRNA-1
chr5_4 exon 51932213 51933205 51932213 ID=Msa0856920-mRNA-1:exon:16216;Parent=Msa0856920-mRNA-1
chr5_4 exon 51933393 51933574 51933393 ID=Msa0856920-mRNA-1:exon:16217;Parent=Msa0856920-mRNA-1
chr5_4 exon 51933899 51933988 51933899 ID=Msa0856920-mRNA-1:exon:16218;Parent=Msa0856920-mRNA-1
chr5_4 exon 51934338 51934625 51934338 ID=Msa0856920-mRNA-1:exon:16219;Parent=Msa0856920-mRNA-1
chr5_4 exon 51934712 51934921 51934712 ID=Msa0856920-mRNA-1:exon:16220;Parent=Msa0856920-mRNA-1
chr5_4 exon 51935249 51935428 51935249 ID=Msa0856920-mRNA-1:exon:16221;Parent=Msa0856920-mRNA-1
chr5_4 exon 51936222 51936668 51936222 ID=Msa0856920-mRNA-1:exon:16222;Parent=Msa0856920-mRNA-1
chr5_4 five_prime_UTR 51928324 51928463 51928324 ID=Msa0856920-mRNA-1:five_prime_utr;Parent=Msa0856920-mRNA-1
chr5_4 five_prime_UTR 51929679 51929714 51929679 ID=Msa0856920-mRNA-1:five_prime_utr;Parent=Msa0856920-mRNA-1
chr5_4 CDS 51929715 51930030 51929715 ID=Msa0856920-mRNA-1:cds;Parent=Msa0856920-mRNA-1
chr5_4 CDS 51930194 51930577 51930194 ID=Msa0856920-mRNA-1:cds;Parent=Msa0856920-mRNA-1
chr5_4 CDS 51930912 51931274 51930912 ID=Msa0856920-mRNA-1:cds;Parent=Msa0856920-mRNA-1
chr5_4 CDS 51931440 51931796 51931440 ID=Msa0856920-mRNA-1:cds;Parent=Msa0856920-mRNA-1
chr5_4 CDS 51932213 51933205 51932213 ID=Msa0856920-mRNA-1:cds;Parent=Msa0856920-mRNA-1
chr5_4 CDS 51933393 51933574 51933393 ID=Msa0856920-mRNA-1:cds;Parent=Msa0856920-mRNA-1
chr5_4 CDS 51933899 51933988 51933899 ID=Msa0856920-mRNA-1:cds;Parent=Msa0856920-mRNA-1
chr5_4 CDS 51934338 51934625 51934338 ID=Msa0856920-mRNA-1:cds;Parent=Msa0856920-mRNA-1
chr5_4 CDS 51934712 51934921 51934712 ID=Msa0856920-mRNA-1:cds;Parent=Msa0856920-mRNA-1
chr5_4 CDS 51935249 51935428 51935249 ID=Msa0856920-mRNA-1:cds;Parent=Msa0856920-mRNA-1
chr5_4 CDS 51936222 51936401 51936222 ID=Msa0856920-mRNA-1:cds;Parent=Msa0856920-mRNA-1
chr5_4 three_prime_UTR 51936402 51936668 51936402 ID=Msa0856920-mRNA-1:three_prime_utr;Parent=Msa0856920-mRNA-1
Gene Sequence

>Msa0856920

ATGGCTCACTGCTCTATCAAGGATACCGGTATAGCGGAATCCCAGTTGAGTTGGTGGTATCTCGTATCATCTTACGAAGAACTCAAAACAGGGAAACAAAAGGTAAAAACCTCGGCCGAGAGTTTCAGTTGTCCGTACTGCCCCGAGAGGAAACAGGATTATAAGTTAAATGAACTCCTGAATCATGCCACCGGGATTGGTCGGAGTAGTTCAGAGAAGAGAAGTGCTAAAGAGAAGGGTAGTCATTTGGCTTTGGTAAAATATTTGGAGCAAGATCTTAACAGTAAGGATGGTGCATCGAGATCTATAGATCAAGTTACGAACACAATAAGTCCAGGACAAACAGTAATTTCTCACTGTTCTATCAAGGATACCGATATAAGTTGGTGGTATGTAGATACAGCTTATGAAGAGCTCAAAAATGGAACTCGGAATGTGAAAACCTCAGACGGGACTTTCATATGCCCGTACTGCCCTAATAGAAAACAGGATTATTTGTACAGGGAACTCCTAGAACATGCTTTTATGGTTGGTCGGAGTAGTTCAGATAAGAGAAGTGCAAGAGAAAGAGCTAATCATCTTGCTTTGTTGAAATATTTGGAAAAGGATATTACGAGTATGCCTGGACCGTCAAAGCCTGTTGATAAAGGTGATCCTGATCCTGCTGTTTGCGATATACCACAGAAATTTTTTCGTTCTAGTACAAAATTGATAAGTCAAGGACAAACTGTCACGGCTCCATGCTCTAACAAGGATACTGGTTCAAGTGATCCTCGAATAAGTTGGTTGTATGTAGATAAATTTTATCAAGAACTCAAGAATGGAAGTCTCAAAGTGAGAATCTCAGATGAGGCTTTCACTTGTCCATACTGCCCGAAAATGAAAAAACCGGACTATGTGTACAGGGAAATCCTTGAACACGCTTCTGGGGTCGGTCAGAGTAGTTCGCAAAAGAGAGGTATCAGAGAGAAGGCAACTCATCTGGCTTTAATGAAATATTTGAAACAGGATATTATATATGTGCCTGCTCCATCAAAACCTGTGATTGAAGGTGATTCTTCTGGAGCCATGATACAAAGCCGAGAAGAAAATGCGACGACTCGCTGCTCCGACAAAGATTCTGATAAAAGTGCATCTCAAATAAATTTAGGGCAATTAAAAAGAACATATGAACAGCTCAAAAAGGGGATTCAAAACGTGAGAACCTCAGATAAGACTTTCACTTGCCCATACTGCCCTAATAATAAAAGGATAAAACGGGATTACGTGTACAGGGAAATCCTTGAACATGCTTCCGGGGTGGGTTGGAGTATCTCACAAACTAGAACTGACATTGAAAAGGCGGATCATCTGGCTTTGGTCAAATATTTGAAAAAGGATCTTATAAATGTCGGTGGTCCTTCAGAACCAACGAAGAAAGGCACCATAATGTTGAACCGAGGAGTAACTGTAACAGGTCACCTCTCTGAGAAGGATGCTAATAATAGCGCATCTCAAATAAATGCGTTGTTTGTAAATAAATCCTATACAGAACTCAAGAAGGGTATTCACAAGGTCAAAACATCAGAAGATACTTTCTCATGTCCGTATTGCCCCAAGAGAAAATGCAATTATAGGTACAGCGAACTCCTTAATCATGCTTTAGGGGTAGGTCAAAGTGACGCACAAAGGAGAAGTGTATTGGAGAAGGCCAACCATCTAGCTTTAGTGAAATATTTGGAAAAGGATCTTATGACTATGAATGTGGAACGTCCGTTAAAGCCTGCAAATAAATATTTGGAAAACAATCTTATGAATGTGGAACAAAATCGAACAAAATCAGTGAATGAAAACATTCTTGTCAATTCTGAAAGGCAGTTTGTATGGCCATGGACTGGGATTGTGGTTAATATTCCCACTAGCCAAACCGAAGATGGACGATGTATTGGTGAAAGTGGTTCCAAGCTAAGGGATGAATACCGAATAAGGGGTTTTAATCCACGTAGAGTCCGAACTCTTTGGAATTCATGGGGTCACACCGGAGCTGCAGTTGTGGAATTTAATAAAAGTTGGCTAGGGTTATATAATGCATTGGCATTTGAAAGGGCGTATGAATTAGATTGTCACGGTAAAAAGGACTGGCTTTCTTATACTGAACAAAAATCCGGTCTTTATGCGTGGGTTGCCCGAGCTGATGACTACAAAGTGGACAACATAATCGGGGAGCAACTACAAAAGATGGATGTTAAAACAATACCTGAAATCATGGAGCAAGATGCTAGAAGGTTCAATAGACTCGTGCAGAGTATGCATAACATTCTTCAAGTAAAGAACAACAAGATAAAAGAAATGGAAGTAGTATGCAATGAAATTACACTTCGCATGGACATTGTGATGGGCGAAATAGACAGACTTGCTCAATCTCACAGTCAAGAGATGAAGAAAATACAGTCAAGTGCAAATCAACACTTTCAGAGTGTTTTGAATGGTCATGAAAGGCTTAAGTTGCAACTGGAATCTCAGAAAAGAGAACTTGAGTTGCGAAGAATTGAACTGGAAAAACGTGAGGCACGTAATGAAAGTGAAAGGAAAAAGTTGGATGAAGAGATTAACAAGACTGCAACGAAAAATCACTTTCTTCAAATGGCTGCTTTGGAGCAACAAAAAGCTGGTGAAAATGTTTTGAAACTTGCCGCAGATCAAAAGCGGCAAAAAGAACAACTCCATGCCAAAATCATCCAGCTTGAAAAACAACTAAATGTGAAACAAAAACTGGAATTGGAGATTCAGCAACTAAAAGGAAAACTAAATGTCATGAAGCACATGGAAGATGATGGAGAACTTGATGTTCTGAATATGATGGATGCCTTACATATAGATTTAAGAGAGAAGGAACAGTCACTTCGAGACATGGACGCATTGAACCAAACTCTGATCATTAAAGAGCGTAAGAGCAATGATGAACTGCAGGAAGCTCGAAAGGAATTGATTACTACCATTAAAGAGATGCCAAGTTGTGCCGATATTCGTGTGAAGAGAATGGGGGAGCTAGACTTTAGACCATTTCTAGAAGCTATGAAGAAAAAATATAATGAAGATGTTGCAGAAGATAGAGCTTCTGAACTGTGTTCGTTGTGGGAAGAGTACCTGAAGGACCCTGACTGGCATCCATTTAAAATTTCTACAATCCAAGGGAAACATCAGGAAGCTATAGACGATGAAGATGAAAAGCTGAATGAACTGAGAAACGAGATGGGCGAAGAAGTTTACAAAGCTGTGGTGGCAGCATTGAAAGAGATAAATGAATATAATCCAAGTGGGCGGTACATAACCTCGGAATTATGGAATTACGCAGAGGGAAAGAGAGCGACTTTGCAAGAAGGAGAATCATCACACATTGTTTTCTCGAAGGGAATCGTGCGGTTGAACATATTTAGGAAATACATCATATATTTGGCTTCACTTGATACTTCAAGCTTCTGTGGAGGTCTTTCTATCGTCACTGCTTTCATAACCACAAGCTTTGTGCTTATGCTTATTCATTTAGGTGGAGTTCGAAGTTAA
Protein sequence

>Msa0856920

MAHCSIKDTGIAESQLSWWYLVSSYEELKTGKQKVKTSAESFSCPYCPERKQDYKLNELLNHATGIGRSSSEKRSAKEKGSHLALVKYLEQDLNSKDGASRSIDQVTNTISPGQTVISHCSIKDTDISWWYVDTAYEELKNGTRNVKTSDGTFICPYCPNRKQDYLYRELLEHAFMVGRSSSDKRSARERANHLALLKYLEKDITSMPGPSKPVDKGDPDPAVCDIPQKFFRSSTKLISQGQTVTAPCSNKDTGSSDPRISWLYVDKFYQELKNGSLKVRISDEAFTCPYCPKMKKPDYVYREILEHASGVGQSSSQKRGIREKATHLALMKYLKQDIIYVPAPSKPVIEGDSSGAMIQSREENATTRCSDKDSDKSASQINLGQLKRTYEQLKKGIQNVRTSDKTFTCPYCPNNKRIKRDYVYREILEHASGVGWSISQTRTDIEKADHLALVKYLKKDLINVGGPSEPTKKGTIMLNRGVTVTGHLSEKDANNSASQINALFVNKSYTELKKGIHKVKTSEDTFSCPYCPKRKCNYRYSELLNHALGVGQSDAQRRSVLEKANHLALVKYLEKDLMTMNVERPLKPANKYLENNLMNVEQNRTKSVNENILVNSERQFVWPWTGIVVNIPTSQTEDGRCIGESGSKLRDEYRIRGFNPRRVRTLWNSWGHTGAAVVEFNKSWLGLYNALAFERAYELDCHGKKDWLSYTEQKSGLYAWVARADDYKVDNIIGEQLQKMDVKTIPEIMEQDARRFNRLVQSMHNILQVKNNKIKEMEVVCNEITLRMDIVMGEIDRLAQSHSQEMKKIQSSANQHFQSVLNGHERLKLQLESQKRELELRRIELEKREARNESERKKLDEEINKTATKNHFLQMAALEQQKAGENVLKLAADQKRQKEQLHAKIIQLEKQLNVKQKLELEIQQLKGKLNVMKHMEDDGELDVLNMMDALHIDLREKEQSLRDMDALNQTLIIKERKSNDELQEARKELITTIKEMPSCADIRVKRMGELDFRPFLEAMKKKYNEDVAEDRASELCSLWEEYLKDPDWHPFKISTIQGKHQEAIDDEDEKLNELRNEMGEEVYKAVVAALKEINEYNPSGRYITSELWNYAEGKRATLQEGESSHIVFSKGIVRLNIFRKYIIYLASLDTSSFCGGLSIVTAFITTSFVLMLIHLGGVRS*