AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1297290


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297290 MtrunA17_Chr4g0054401 97.536 1055 25 1 1 1055 1 1054 0.0 2057
Msa1297290 MtrunA17_Chr7g0220961 31.400 793 503 10 48 824 44 811 4.08e-80 285
Msa1297290 MtrunA17_Chr6g0454711 29.306 836 548 6 12 838 51 852 3.71e-78 279
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297290 AT5G65770.1 53.641 824 375 4 5 825 13 832 0.0 816
Msa1297290 AT5G65770.3 53.641 824 375 4 5 825 13 832 0.0 816
Msa1297290 AT5G65780.2 53.125 832 375 6 5 825 13 840 0.0 804
Msa1297290 AT5G65770.2 51.939 851 375 5 5 825 13 859 0.0 801
Msa1297290 AT1G67230.1 28.347 829 550 8 4 824 12 804 2.15e-70 256
Msa1297290 AT1G13220.3 28.970 825 553 8 11 823 54 857 1.86e-69 253
Msa1297290 AT1G13220.2 28.970 825 553 8 11 823 41 844 2.90e-69 253
Msa1297290 AT1G68790.1 27.690 762 519 5 2 762 24 754 1.06e-56 214
Msa1297290 AT1G13220.1 34.661 251 161 2 11 258 54 304 3.14e-37 145

Find 224 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGGAGTCTTTGGCATCTT+TGG 0.205853 8_3:-57354985 Msa1297290:CDS
CAGCCCATTCTCTATTTCTT+AGG 0.212236 8_3:+57354298 None:intergenic
CCAACTCATGTTCCCTTTCC+AGG 0.223528 8_3:+57355174 None:intergenic
CATGTTCCCTTTCCAGGATT+TGG 0.226018 8_3:+57355180 None:intergenic
TCTTGTAAGATCTCAGAATT+TGG 0.229655 8_3:-57354856 Msa1297290:CDS
GACTGAAGAATTGAAGAAAT+TGG 0.231000 8_3:-57354178 Msa1297290:CDS
TTAGATATTACATATATATT+AGG 0.250015 8_3:-57352591 Msa1297290:three_prime_UTR
AGACTCCTGCAGATCTTTCT+TGG 0.253815 8_3:+57354998 None:intergenic
ATCTCAGAATTTGGAGCTAT+TGG 0.270107 8_3:-57354847 Msa1297290:CDS
GTTATTAGTGTATAGATAAT+TGG 0.273305 8_3:-57352393 Msa1297290:three_prime_UTR
GTATTATGTTGATGCTGTAC+TGG 0.289459 8_3:-57351987 Msa1297290:three_prime_UTR
TGTCAATTACTCCGAGTTCT+AGG 0.290991 8_3:-57358395 Msa1297290:CDS
TTTGAAGACGATCTAATTCC+TGG 0.294334 8_3:+57355806 None:intergenic
GATAACAGGCACTCACTAAA+TGG 0.300038 8_3:-57355584 Msa1297290:intron
CTTCCCGCCTCTTCTCAATA+AGG 0.300382 8_3:+57354490 None:intergenic
TGCAATTGCAAATTGCAATT+AGG 0.310934 8_3:-57352338 Msa1297290:three_prime_UTR
GCCATTCGTTCTTCTGCTCT+TGG 0.314925 8_3:+57353541 None:intergenic
TGAGCGGACTGAGATAAATT+TGG 0.321576 8_3:-57354328 Msa1297290:CDS
TGAAATGCTTAAATCTGATA+TGG 0.322733 8_3:-57354118 Msa1297290:CDS
CATTACTACACGAGCTTCTT+CGG 0.324345 8_3:+57352985 None:intergenic
GAAAGATCTGCAGGAGTCTT+TGG 0.325327 8_3:-57354994 Msa1297290:CDS
TCATATGGGCCTTCTCATAT+TGG 0.331170 8_3:-57356687 Msa1297290:CDS
TTCAAATCCAGATTTGCTTT+TGG 0.332770 8_3:-57352177 Msa1297290:three_prime_UTR
CATTGTGCCAAAAGCAAATC+TGG 0.346603 8_3:+57352170 None:intergenic
CCTGATGACTTCTGCACAAA+TGG 0.349964 8_3:+57353973 None:intergenic
AGCTAACGCAGATTTATTCA+TGG 0.356265 8_3:+57356583 None:intergenic
GCCTTGTGGTTCTAGTGTAT+TGG 0.363904 8_3:-57352831 Msa1297290:CDS
CCAGCATATTGATGCTCTTA+AGG 0.365197 8_3:-57354406 Msa1297290:CDS
TCTGTGCAGATTATCTTGAT+TGG 0.365535 8_3:+57352901 None:intergenic
GATGTCATTTGTTGGTGTAT+TGG 0.366224 8_3:-57352421 Msa1297290:three_prime_UTR
ATCAACATCCACATCTTTGC+AGG 0.372268 8_3:+57354020 None:intergenic
GGAGAAAGCTGCAAAAGAAT+TGG 0.380847 8_3:-57354385 Msa1297290:CDS
CATATTGGAGAGGAAGGAAT+TGG 0.382576 8_3:-57356672 Msa1297290:CDS
AGAATTGGAACAGGTTTCCT+TGG 0.383621 8_3:-57354370 Msa1297290:CDS
ACCTGTTTCCGATTACTGTT+AGG 0.383846 8_3:-57352774 Msa1297290:intron
ACTCCTTCTCAGACGCTTTG+AGG 0.384043 8_3:+57355072 None:intergenic
CTGTGCAGATTATCTTGATT+GGG 0.384123 8_3:+57352902 None:intergenic
AACTCTTGAGTTTCTGTTGT+CGG 0.384140 8_3:+57351939 None:intergenic
GGTACTTCAACAATTACTTT+TGG 0.384732 8_3:+57353736 None:intergenic
TTTAGTAATGGACGGCAAAT+GGG 0.387030 8_3:-57353775 Msa1297290:CDS
AGAGCGTGGTGCGCTTTATA+CGG 0.387276 8_3:-57358635 Msa1297290:five_prime_UTR
TCTGTGACTAAAGATGTTAA+TGG 0.393938 8_3:-57353673 Msa1297290:CDS
TTGTACAGGGACTTTGGATG+TGG 0.394338 8_3:-57352629 Msa1297290:intron
TGTGAATACCTAACAGTAAT+CGG 0.401322 8_3:+57352766 None:intergenic
CTGGCTTTGTACAGGGACTT+TGG 0.403595 8_3:-57352635 Msa1297290:intron
CGCTTTCCGATGAACAGATC+TGG 0.406990 8_3:-57358359 Msa1297290:CDS
TGAAGCAGAAAAGAAATTTA+CGG 0.407769 8_3:-57356258 Msa1297290:CDS
ATATGATCATCAACATCATA+TGG 0.413448 8_3:-57356702 Msa1297290:CDS
CTCCCACTCAACTTCAAACT+TGG 0.415131 8_3:+57354794 None:intergenic
CAATGCAGGATGTCATTTGT+TGG 0.415155 8_3:-57352429 Msa1297290:intron
CACAAAGTTTAAACTTGAAA+AGG 0.416010 8_3:-57355770 Msa1297290:CDS
GAGGTCATCCAAAGTGAAAC+AGG 0.416294 8_3:-57354921 Msa1297290:CDS
CTGTGACTAAAGATGTTAAT+GGG 0.418605 8_3:-57353672 Msa1297290:CDS
AACAGATCTGGAAACGGCTT+AGG 0.420234 8_3:-57358347 Msa1297290:CDS
TGTTGATGCTGTACTGGGCT+AGG 0.422310 8_3:-57351981 Msa1297290:three_prime_UTR
GTGGCTTCTGATACAAATAA+TGG 0.423209 8_3:-57353844 Msa1297290:CDS
GATAGTTAGAGACAACATAT+TGG 0.428980 8_3:-57352245 Msa1297290:three_prime_UTR
GAAAACCAGCCTACAACTAC+TGG 0.430253 8_3:-57355725 Msa1297290:CDS
CGACAAGCTAAGAGAAGAAA+AGG 0.433504 8_3:-57354679 Msa1297290:CDS
TGCTGATCCACTTGTAGATC+TGG 0.434812 8_3:-57353578 Msa1297290:CDS
GGCCTCCAGTAGTTGTAGGC+TGG 0.436397 8_3:+57355720 None:intergenic
GTGGCGTATCAGGAGAATTT+CGG 0.436754 8_3:+57353890 None:intergenic
ACCTAACAGTAATCGGAAAC+AGG 0.439212 8_3:+57352773 None:intergenic
AAGCGAAACGCGATAAGCTT+AGG 0.439499 8_3:-57358474 Msa1297290:five_prime_UTR
ACCACAAGGCAAAATTTCTT+CGG 0.440283 8_3:+57352844 None:intergenic
AGCTGCAAAAGAATTGGAAC+AGG 0.440708 8_3:-57354379 Msa1297290:CDS
GGGGTTACTTGCTAGTGAAC+GGG 0.444606 8_3:-57354625 Msa1297290:CDS
CGGAGTAATTGACAGAGGTT+TGG 0.444619 8_3:+57358404 None:intergenic
AGGTTTCCTTGGAGATGAAA+AGG 0.444918 8_3:-57354359 Msa1297290:CDS
CACCCTTACACAACAAGAAC+AGG 0.444990 8_3:-57355698 Msa1297290:intron
ACCAACAGAAAATATCTTCA+AGG 0.445161 8_3:-57354089 Msa1297290:CDS
AATTTGCAATTGCATCGATA+AGG 0.446834 8_3:+57352347 None:intergenic
GCGCTCATTCTTAATAAAAG+TGG 0.447106 8_3:+57354701 None:intergenic
TGGAAACGGCTTAGGGAGGC+TGG 0.447330 8_3:-57358339 Msa1297290:CDS
GGGTGGCCTCCAGTAGTTGT+AGG 0.448905 8_3:+57355716 None:intergenic
AAGCTTAGGATAATCGCGTT+TGG 0.451114 8_3:-57358460 Msa1297290:five_prime_UTR
CCATTTGTGCAGAAGTCATC+AGG 0.451956 8_3:-57353973 Msa1297290:CDS
GAACCTGTTCTTGTTGTGTA+AGG 0.453905 8_3:+57355695 None:intergenic
GTCAATTACTCCGAGTTCTA+GGG 0.454173 8_3:-57358394 Msa1297290:CDS
GTTGAAGTACCCTCTCTAGA+TGG 0.457116 8_3:-57353724 Msa1297290:CDS
TGGATGTGGGCATTGGTAGT+TGG 0.457695 8_3:-57352615 Msa1297290:three_prime_UTR
TGAGAAGAGGCGGGAAGAAG+TGG 0.459412 8_3:-57354484 Msa1297290:CDS
CATGAACATGCTGAGTGGTT+TGG 0.461814 8_3:-57354579 Msa1297290:CDS
GAATCTTTGAAGAAGACAAT+AGG 0.462052 8_3:-57356542 Msa1297290:CDS
TGATAACGCAAAGCAGAGAT+TGG 0.462406 8_3:-57354943 Msa1297290:CDS
GAGACGAGCTTGGGAATTGA+AGG 0.462973 8_3:-57355228 Msa1297290:CDS
ATCCCTTTCTGAAAGGCAAA+AGG 0.464632 8_3:-57355908 Msa1297290:CDS
CGTTAGCTGAATCAAGAAAA+CGG 0.465398 8_3:-57356568 Msa1297290:CDS
TACTTGGCGTTCTTCTGAAA+AGG 0.469382 8_3:+57353642 None:intergenic
CTAGTGCTGCTCGATTCTCC+TGG 0.471595 8_3:-57353939 Msa1297290:CDS
ACAAGTCGCCTGTTTCACTT+TGG 0.473180 8_3:+57354913 None:intergenic
TCAGAAGGCTATAGCAGATC+GGG 0.474987 8_3:-57355336 Msa1297290:CDS
TTAAAGAACTTGAGGTTCAA+AGG 0.475754 8_3:-57354260 Msa1297290:CDS
TCAGAGATTCAGCAGGTGTC+AGG 0.476485 8_3:-57353034 Msa1297290:CDS
TGCAAATTGCAATTAGGATG+AGG 0.477222 8_3:-57352332 Msa1297290:three_prime_UTR
TCACAAAATCATCAAGTGTT+CGG 0.481290 8_3:+57352106 None:intergenic
TAAAGAACTTGAGGTTCAAA+GGG 0.483210 8_3:-57354259 Msa1297290:CDS
GGAGGTTGATCTTAAACAAC+GGG 0.485407 8_3:-57355207 Msa1297290:CDS
AGAAGTGGAAAGTTATTTGA+AGG 0.485948 8_3:-57354469 Msa1297290:CDS
GTGACCTAAGAAATAGAGAA+TGG 0.485995 8_3:-57354302 Msa1297290:CDS
TAAACAGTACACCCATGACT+TGG 0.488917 8_3:-57354646 Msa1297290:CDS
GATACAAATAATGGTAGCAA+TGG 0.490045 8_3:-57353835 Msa1297290:CDS
TCGTGTAGTAATGGTTGATA+AGG 0.492161 8_3:-57352975 Msa1297290:CDS
TAGGTAGTGGCCTGATCTAA+AGG 0.493923 8_3:+57353511 None:intergenic
GAATCTCTGATATATCTGAC+TGG 0.495750 8_3:+57353047 None:intergenic
CAAGTAGGCAGAGGGAAAAG+AGG 0.497312 8_3:-57353625 Msa1297290:CDS
GGGACTTTGGATGTGGGCAT+TGG 0.497607 8_3:-57352622 Msa1297290:three_prime_UTR
GGAAAATTTCATGAAGAAGA+TGG 0.499212 8_3:-57354604 Msa1297290:CDS
ATATATATTAGGAGTGTGTA+AGG 0.499589 8_3:-57352580 Msa1297290:intron
TTGAGACTAAGAGACGAGCT+TGG 0.500213 8_3:-57355238 Msa1297290:CDS
ATACAAATAATGGTAGCAAT+GGG 0.500523 8_3:-57353834 Msa1297290:CDS
TATTATGTTGATGCTGTACT+GGG 0.500683 8_3:-57351986 Msa1297290:three_prime_UTR
GAATTTGGAGCTATTGGCTG+AGG 0.501774 8_3:-57354841 Msa1297290:CDS
TAAGGTGTATATACAAAAGC+AGG 0.502182 8_3:+57352365 None:intergenic
TAGCAATGGGCAAAAGCACT+TGG 0.503709 8_3:-57353821 Msa1297290:CDS
TGAGGAATCGATTAAGCATA+AGG 0.503828 8_3:-57358310 Msa1297290:CDS
CGAAGAAGCTCGTGTAGTAA+TGG 0.505439 8_3:-57352984 Msa1297290:CDS
ACAACGGGAGGACCAAATCC+TGG 0.506111 8_3:-57355192 Msa1297290:CDS
TGAGACTAAGAGACGAGCTT+GGG 0.506442 8_3:-57355237 Msa1297290:CDS
GCTACAAATGCAGCGCAAAT+CGG 0.506734 8_3:-57355273 Msa1297290:CDS
GTTAGCTGAATCAAGAAAAC+GGG 0.507240 8_3:-57356567 Msa1297290:CDS
CCTTAAGAGCATCAATATGC+TGG 0.508753 8_3:+57354406 None:intergenic
GAGAATCGAGCAGCACTAGC+AGG 0.513330 8_3:+57353943 None:intergenic
CCTGGAAAGGGAACATGAGT+TGG 0.515780 8_3:-57355174 Msa1297290:CDS
AAACAGTACACCCATGACTT+GGG 0.521393 8_3:-57354645 Msa1297290:CDS
GGCCAAGTTTGAAGTTGAGT+GGG 0.523053 8_3:-57354796 Msa1297290:CDS
TAGCAAGTAACCCCAAGTCA+TGG 0.524802 8_3:+57354634 None:intergenic
TGGCGTTCTTCTGAAAAGGC+AGG 0.525277 8_3:+57353646 None:intergenic
TATTGCTAAGCTTGAAGCTG+AGG 0.526817 8_3:-57358265 Msa1297290:intron
TGTACAGGGACTTTGGATGT+GGG 0.531404 8_3:-57352628 Msa1297290:intron
CCGATGAACAGATCTGGAAA+CGG 0.532482 8_3:-57358353 Msa1297290:CDS
GTGGTTTGGCAAGATGCAGC+AGG 0.532962 8_3:-57354565 Msa1297290:CDS
CAGAATTTATAGAAAATGAA+AGG 0.535054 8_3:-57354734 Msa1297290:CDS
ATCCTCTCTTTGGTTGAGCG+AGG 0.535700 8_3:+57355846 None:intergenic
ACAGATCTGGAAACGGCTTA+GGG 0.536032 8_3:-57358346 Msa1297290:CDS
TAGATCAGGCCACTACCTAC+TGG 0.536314 8_3:-57353507 Msa1297290:intron
CTCAGAAGGCTATAGCAGAT+CGG 0.536943 8_3:-57355337 Msa1297290:CDS
TGGAGAACACAGAAGGAATA+CGG 0.537560 8_3:-57352811 Msa1297290:CDS
TGACCTAAGAAATAGAGAAT+GGG 0.539081 8_3:-57354301 Msa1297290:CDS
AACCTGTTCTTGTTGTGTAA+GGG 0.540669 8_3:+57355696 None:intergenic
TTGAAGACGATCTAATTCCT+GGG 0.540729 8_3:+57355807 None:intergenic
GTTTGTATATTTAAGCCTCA+AGG 0.540797 8_3:-57351919 Msa1297290:three_prime_UTR
TATGATCATCAACATCATAT+GGG 0.542963 8_3:-57356701 Msa1297290:CDS
AGGCCAAGTTTGAAGTTGAG+TGG 0.544846 8_3:-57354797 Msa1297290:CDS
CCTTCTCATATTGGAGAGGA+AGG 0.544902 8_3:-57356678 Msa1297290:CDS
GGAGGACCAAATCCTGGAAA+GGG 0.552592 8_3:-57355186 Msa1297290:CDS
TGGGGTTACTTGCTAGTGAA+CGG 0.552616 8_3:-57354626 Msa1297290:CDS
ACAAGCCAAGAAAGATCTGC+AGG 0.553193 8_3:-57355003 Msa1297290:CDS
GCAAATTGCAATTAGGATGA+GGG 0.553275 8_3:-57352331 Msa1297290:three_prime_UTR
ATTTATTCATGGATAAATCA+CGG 0.557183 8_3:+57356594 None:intergenic
GAAGAACGCCAAGTAGGCAG+AGG 0.557769 8_3:-57353634 Msa1297290:CDS
TAAGCATTTCAACAATAGCA+AGG 0.563138 8_3:+57354130 None:intergenic
CTGTTCTTGTTGTGTAAGGG+TGG 0.565824 8_3:+57355699 None:intergenic
ATCGCGTTTGGAGTTTGCGA+TGG 0.566188 8_3:-57358448 Msa1297290:exon
TAATTGTATTAAAGAACTTG+AGG 0.568588 8_3:-57354268 Msa1297290:CDS
GATATAACAGTGTTGCAGAA+AGG 0.568859 8_3:-57356184 Msa1297290:CDS
AGATATATCAGAGATTCAGC+AGG 0.569147 8_3:-57353041 Msa1297290:CDS
CCGTTTCCAGATCTGTTCAT+CGG 0.569949 8_3:+57358353 None:intergenic
GATGTTGATAACATTGGCAA+TGG 0.570955 8_3:-57354006 Msa1297290:CDS
GATAGAATCGAAGGTAGAAA+CGG 0.571351 8_3:+57358591 None:intergenic
AGCAAGTAACCCCAAGTCAT+GGG 0.571896 8_3:+57354635 None:intergenic
ATTTATAGAAAATGAAAGGA+AGG 0.573898 8_3:-57354730 Msa1297290:CDS
ATAACCTTATTGAGAAGAGG+CGG 0.574080 8_3:-57354494 Msa1297290:CDS
ACCAAGAGCAGAAGAACGAA+TGG 0.574615 8_3:-57353542 Msa1297290:CDS
TGATAAGTTGAAAGCTGAGA+AGG 0.575127 8_3:-57354817 Msa1297290:CDS
GACAGAGGTTTGGCAGAGCT+AGG 0.577648 8_3:+57358414 None:intergenic
TAAATAACCTTATTGAGAAG+AGG 0.577808 8_3:-57354497 Msa1297290:CDS
TTCCGTACGCATCTCATGCA+AGG 0.577859 8_3:+57356340 None:intergenic
ATGTTGATAACATTGGCAAT+GGG 0.580067 8_3:-57354005 Msa1297290:CDS
TTGGAAAATGACAAGCCACT+TGG 0.581379 8_3:-57353802 Msa1297290:CDS
GGGAGGACCAAATCCTGGAA+AGG 0.583998 8_3:-57355187 Msa1297290:CDS
TAACCTTATTGAGAAGAGGC+GGG 0.584991 8_3:-57354493 Msa1297290:CDS
CAAGATGCAGCAGGAGCGAG+CGG 0.585787 8_3:-57354556 Msa1297290:CDS
GCTAGCATTTCCATCTAGAG+AGG 0.589347 8_3:+57353714 None:intergenic
AAGCGCGTGAAGATATCCTC+AGG 0.590354 8_3:-57356145 Msa1297290:CDS
AGAGGCAATCCCTTTCTGAA+AGG 0.590940 8_3:-57355915 Msa1297290:CDS
AAATTTGTACCAGTAGGTAG+TGG 0.593396 8_3:+57353498 None:intergenic
AAGATATAATTTGCCGCCTG+AGG 0.593589 8_3:+57356129 None:intergenic
TACGGAATGTGCTGAAACAA+AGG 0.594764 8_3:-57356324 Msa1297290:CDS
TTAGTAATGGACGGCAAATG+GGG 0.597254 8_3:-57353774 Msa1297290:CDS
ATCAAGATCACTGAGTGAGA+AGG 0.598320 8_3:-57355144 Msa1297290:CDS
GGCCTTGCATGAGATGCGTA+CGG 0.599729 8_3:-57356342 Msa1297290:CDS
CTTGAGTTCCTGCAAAGATG+TGG 0.599792 8_3:-57354028 Msa1297290:CDS
AAGCCTCAAAGCGTCTGAGA+AGG 0.599945 8_3:-57355075 Msa1297290:CDS
CTTCTCAAAACCCTAGAACT+CGG 0.600395 8_3:+57358384 None:intergenic
AATGTAGGATGAAACTCAGA+AGG 0.602666 8_3:-57355351 Msa1297290:intron
CCTTCCTCTCCAATATGAGA+AGG 0.606050 8_3:+57356678 None:intergenic
TAACGCAAAGCAGAGATTGG+AGG 0.607102 8_3:-57354940 Msa1297290:CDS
GAAAGCAACAATCAAAACCA+TGG 0.612375 8_3:+57352197 None:intergenic
TAGGGAGGCTGGATTTGATG+AGG 0.612435 8_3:-57358328 Msa1297290:CDS
CAGATCTGTTCATCGGAAAG+CGG 0.614081 8_3:+57358360 None:intergenic
AATCTCTGATATATCTGACT+GGG 0.618522 8_3:+57353048 None:intergenic
AGGAGGTTGATCTTAAACAA+CGG 0.618769 8_3:-57355208 Msa1297290:CDS
AAGAACGCCAAGTAGGCAGA+GGG 0.620212 8_3:-57353633 Msa1297290:CDS
GGCGTGATTGATAGAATCGA+AGG 0.620245 8_3:+57358582 None:intergenic
TTCTGCGCCAGATCTACAAG+TGG 0.621294 8_3:+57353571 None:intergenic
CTAGCATTTCCATCTAGAGA+GGG 0.627557 8_3:+57353715 None:intergenic
ATAAGGAGATGAATCTTGAG+AGG 0.627569 8_3:-57355933 Msa1297290:CDS
AACAGTACACCCATGACTTG+GGG 0.628762 8_3:-57354644 Msa1297290:CDS
ACGAGCTTGGGAATTGAAGG+AGG 0.629550 8_3:-57355225 Msa1297290:CDS
AATAAGTGCTGTGAGTGCGT+TGG 0.630124 8_3:+57358561 None:intergenic
GTATGAACATGTTAAAACCA+TGG 0.630158 8_3:-57356642 Msa1297290:CDS
AGTGTATTGGAGAACACAGA+AGG 0.633214 8_3:-57352818 Msa1297290:CDS
GAGCAGTTGACAGTTCCACT+AGG 0.641324 8_3:+57355114 None:intergenic
CATCTTTGCAGGAACTCAAG+CGG 0.649707 8_3:+57354031 None:intergenic
GGCGTCAAAGATGCATGCAT+AGG 0.650637 8_3:-57356521 Msa1297290:CDS
GATGTGGATGTTGATAACAT+TGG 0.656585 8_3:-57354012 Msa1297290:CDS
TGAGAAGGAGAAAGACCTAG+TGG 0.658465 8_3:-57355129 Msa1297290:CDS
TGGGCCTTCTCATATTGGAG+AGG 0.667331 8_3:-57356682 Msa1297290:CDS
AACCAGCCTACAACTACTGG+AGG 0.669577 8_3:-57355722 Msa1297290:CDS
CCATTACTAAAATTACCAAG+TGG 0.673447 8_3:+57353787 None:intergenic
ATCCTCGCTCAACCAAAGAG+AGG 0.673919 8_3:-57355848 Msa1297290:CDS
TAACTCAGATGACTCGACCA+TGG 0.674789 8_3:+57356625 None:intergenic
GGTTGATCTTAAACAACGGG+AGG 0.676677 8_3:-57355204 Msa1297290:CDS
GATCTGGAAACGGCTTAGGG+AGG 0.677230 8_3:-57358343 Msa1297290:CDS
TGAAAAGGCTTCAAACTGAG+CGG 0.688590 8_3:-57354344 Msa1297290:CDS
CATCAGACTCTTACACAAGG+TGG 0.692343 8_3:-57354054 Msa1297290:CDS
GAACTCGGAGTAATTGACAG+AGG 0.692990 8_3:+57358399 None:intergenic
CGCGTGAAGATATCCTCAGG+CGG 0.693321 8_3:-57356142 Msa1297290:CDS
AGCAGAAAAGAAATTTACGG+AGG 0.700844 8_3:-57356255 Msa1297290:CDS
AAGCATCAGACTCTTACACA+AGG 0.711698 8_3:-57354057 Msa1297290:CDS
TCCAATACACTAGAACCACA+AGG 0.737093 8_3:+57352830 None:intergenic
AGTGAAGAAAGAAAAGAGCG+TGG 0.738977 8_3:-57358649 None:intergenic
TGGCACATGAACATGCTGAG+TGG 0.773883 8_3:-57354584 Msa1297290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr8_3:57354084-57354103 None:intergenic 0.0%
!!! TTTAATTTGATTTGATAAAT+TGG - chr8_3:57353000-57353019 Msa1297290:CDS 10.0%
!! TTATTATGATATTCAATTAA+AGG - chr8_3:57353173-57353192 Msa1297290:intron 10.0%
!! ATATTTAAAAATTCTAAGTT+GGG - chr8_3:57354881-57354900 Msa1297290:CDS 10.0%
!!! TGTTATTATTTTAATTTTGT+TGG - chr8_3:57355118-57355137 Msa1297290:CDS 10.0%
!!! TGTTATTATTTTAATTTTGT+TGG - chr8_3:57355118-57355137 Msa1297290:CDS 10.0%
!! AAATTTATTTATGAGAATAT+TGG - chr8_3:57357389-57357408 Msa1297290:intron 10.0%
!! TTAGATATTACATATATATT+AGG - chr8_3:57357962-57357981 Msa1297290:intron 10.0%
!! AATATTATTTATGGCTTATA+TGG - chr8_3:57352492-57352511 Msa1297290:intron 15.0%
!!! AATTCAAAGTATTCTATAAA+AGG + chr8_3:57352967-57352986 None:intergenic 15.0%
!!! TATTGTTTTATAGTTAAGTT+TGG + chr8_3:57353460-57353479 None:intergenic 15.0%
!!! ATAAGAAAAATATATTTTGC+TGG + chr8_3:57353805-57353824 None:intergenic 15.0%
!! ATCAAAATTTATATCATTAC+AGG + chr8_3:57354531-57354550 None:intergenic 15.0%
!! CATATTTAAAAATTCTAAGT+TGG - chr8_3:57354880-57354899 Msa1297290:CDS 15.0%
!! TTAAAATAATAACAATACAG+AGG + chr8_3:57355112-57355131 None:intergenic 15.0%
!!! ATTATTTTAATTTTGTTGGA+TGG - chr8_3:57355122-57355141 Msa1297290:CDS 15.0%
!!! ATTATTTTAATTTTGTTGGA+TGG - chr8_3:57355122-57355141 Msa1297290:CDS 15.0%
!! CTTATGAATAATATATTACT+CGG + chr8_3:57357423-57357442 None:intergenic 15.0%
!! GATAAAGTTATAGAAATTTA+CGG + chr8_3:57358030-57358049 None:intergenic 15.0%
!! TTAAGAAAAATCTAGAGATA+CGG - chr8_3:57352695-57352714 Msa1297290:intron 20.0%
!! ATCAAATTTACACTTTAAAC+TGG - chr8_3:57353034-57353053 Msa1297290:CDS 20.0%
!! AGATGAACTTTATTGATATT+AGG - chr8_3:57353087-57353106 Msa1297290:intron 20.0%
!! GATGAACTTTATTGATATTA+GGG - chr8_3:57353088-57353107 Msa1297290:intron 20.0%
!!! TTTATTGATATTAGGGTTTT+GGG - chr8_3:57353095-57353114 Msa1297290:intron 20.0%
!! ATTGAATATCATAATAAGCA+TGG + chr8_3:57353170-57353189 None:intergenic 20.0%
!! ATTAACCTGTTAATGTTAAT+TGG - chr8_3:57353303-57353322 Msa1297290:intron 20.0%
!! ATTAACCAATTAACATTAAC+AGG + chr8_3:57353311-57353330 None:intergenic 20.0%
!! CATATTTAAGCAATTCAAAT+TGG - chr8_3:57353346-57353365 Msa1297290:intron 20.0%
!! GTGTGTATTATAGTTAAATT+TGG - chr8_3:57353416-57353435 Msa1297290:intron 20.0%
!! ATTTATTCATGGATAAATCA+CGG + chr8_3:57353962-57353981 None:intergenic 20.0%
!! GAAAGAAAGAAAGAAAAAAT+TGG + chr8_3:57354147-57354166 None:intergenic 20.0%
!! AAAATTTATATCATTACAGG+TGG + chr8_3:57354528-57354547 None:intergenic 20.0%
!! TTAAAATAATAACAATGCAG+AGG + chr8_3:57355167-57355186 None:intergenic 20.0%
!!! AATTTTTGAAGTGAAACTAA+AGG - chr8_3:57355664-57355683 Msa1297290:intron 20.0%
!! CAGAATTTATAGAAAATGAA+AGG - chr8_3:57355819-57355838 Msa1297290:CDS 20.0%
!! ATTTATAGAAAATGAAAGGA+AGG - chr8_3:57355823-57355842 Msa1297290:CDS 20.0%
!! TAATTGTATTAAAGAACTTG+AGG - chr8_3:57356285-57356304 Msa1297290:CDS 20.0%
!!! GTTAGCATTTTTTTTTTACA+AGG - chr8_3:57357100-57357119 Msa1297290:intron 20.0%
!! TTAAAAAGTCATACAAATGA+TGG - chr8_3:57357220-57357239 Msa1297290:intron 20.0%
!! AATAAATTTGTAGATCTTTG+AGG + chr8_3:57357378-57357397 None:intergenic 20.0%
!! ATATTATTCATAAGTAGTCT+AGG - chr8_3:57357429-57357448 Msa1297290:intron 20.0%
!!! TTTATTGTAACTTCTTTTCT+AGG - chr8_3:57357826-57357845 Msa1297290:intron 20.0%
!! TTATCGAAGTAAAATTGATT+GGG + chr8_3:57358054-57358073 None:intergenic 20.0%
!! ATTATCGAAGTAAAATTGAT+TGG + chr8_3:57358055-57358074 None:intergenic 20.0%
!! GTTATTAGTGTATAGATAAT+TGG - chr8_3:57358160-57358179 Msa1297290:intron 20.0%
!!! TGAAATTTTAATCAGCTTCT+TGG + chr8_3:57352058-57352077 None:intergenic 25.0%
!!! AGTTTGAGTTGATTGAATTA+GGG - chr8_3:57352351-57352370 Msa1297290:three_prime_UTR 25.0%
!! TTTTACTTTGACATTGTTTG+TGG - chr8_3:57352395-57352414 Msa1297290:three_prime_UTR 25.0%
!! CTTATATGGATTATTTGTGA+TGG - chr8_3:57352506-57352525 Msa1297290:intron 25.0%
! AAGTAGAGTAGATTACATAA+AGG - chr8_3:57352619-57352638 Msa1297290:three_prime_UTR 25.0%
!! TAAAGGTTAGTCAAATTACT+AGG - chr8_3:57352636-57352655 Msa1297290:intron 25.0%
!! AAAGGTTAGTCAAATTACTA+GGG - chr8_3:57352637-57352656 Msa1297290:intron 25.0%
!! AGTTTCTCTTATAGTTTTCT+AGG + chr8_3:57352674-57352693 None:intergenic 25.0%
! GTATTCTATAAAAGGACAAA+TGG + chr8_3:57352959-57352978 None:intergenic 25.0%
!! CTTTATTGATATTAGGGTTT+TGG - chr8_3:57353094-57353113 Msa1297290:intron 25.0%
! TTAACTATAATACACACACA+TGG + chr8_3:57353413-57353432 None:intergenic 25.0%
! ATTTGAATCAAGAAGAGAAT+TGG + chr8_3:57353494-57353513 None:intergenic 25.0%
!!! GGTTATTTTTACAATACATG+TGG + chr8_3:57353585-57353604 None:intergenic 25.0%
! ACTTGAAAAGACAATTTGAT+TGG + chr8_3:57353712-57353731 None:intergenic 25.0%
! ATATGATCATCAACATCATA+TGG - chr8_3:57353851-57353870 Msa1297290:CDS 25.0%
! TATGATCATCAACATCATAT+GGG - chr8_3:57353852-57353871 Msa1297290:CDS 25.0%
! TGAAGCAGAAAAGAAATTTA+CGG - chr8_3:57354295-57354314 Msa1297290:CDS 25.0%
! CACAAAGTTTAAACTTGAAA+AGG - chr8_3:57354783-57354802 Msa1297290:CDS 25.0%
! ATGAAAAAAAAGAAGAGTTG+CGG - chr8_3:57355789-57355808 Msa1297290:CDS 25.0%
! TAAATAACCTTATTGAGAAG+AGG - chr8_3:57356056-57356075 Msa1297290:intron 25.0%
! TGAAATGCTTAAATCTGATA+TGG - chr8_3:57356435-57356454 Msa1297290:intron 25.0%
! ATACAAATAATGGTAGCAAT+GGG - chr8_3:57356719-57356738 Msa1297290:intron 25.0%
!!! TTGGTAATTTTAGTAATGGA+CGG - chr8_3:57356770-57356789 Msa1297290:intron 25.0%
! GTGCTTCAAATCATAAAAAA+GGG - chr8_3:57357541-57357560 Msa1297290:intron 25.0%
!! ATATATATTAGGAGTGTGTA+AGG - chr8_3:57357973-57357992 Msa1297290:intron 25.0%
! TATCGAAGTAAAATTGATTG+GGG + chr8_3:57358053-57358072 None:intergenic 25.0%
!!! TTTTATGAGTACTTTTTCCA+TGG - chr8_3:57358339-57358358 Msa1297290:CDS 25.0%
!!! GTGTTTGATTTGATTGTTTT+TGG - chr8_3:57358482-57358501 Msa1297290:five_prime_UTR 25.0%
! TTGTGTTCTTTTTGCTTTAG+GGG + chr8_3:57352018-57352037 None:intergenic 30.0%
! GTTGTGTTCTTTTTGCTTTA+GGG + chr8_3:57352019-57352038 None:intergenic 30.0%
! TGTTGTGTTCTTTTTGCTTT+AGG + chr8_3:57352020-57352039 None:intergenic 30.0%
!! GAGTTTGAGTTGATTGAATT+AGG - chr8_3:57352350-57352369 Msa1297290:three_prime_UTR 30.0%
!! GTTTGAGTTGATTGAATTAG+GGG - chr8_3:57352352-57352371 Msa1297290:three_prime_UTR 30.0%
GATTGAATTAGGGGATTAAT+AGG - chr8_3:57352361-57352380 Msa1297290:three_prime_UTR 30.0%
! ATGGATTATTTGTGATGGTT+CGG - chr8_3:57352511-57352530 Msa1297290:intron 30.0%
ATACAGTACATTTGTAAGAC+TGG - chr8_3:57352537-57352556 Msa1297290:intron 30.0%
TGTAAAGATGATAGATCATG+CGG - chr8_3:57352813-57352832 Msa1297290:CDS 30.0%
CTATCTATGACTTACCTATA+AGG + chr8_3:57352845-57352864 None:intergenic 30.0%
TTTACACTTTAAACTGGTAG+TGG - chr8_3:57353040-57353059 Msa1297290:CDS 30.0%
ATATCATAATAAGCATGGAC+CGG + chr8_3:57353165-57353184 None:intergenic 30.0%
ATTTGCAAAGTCAATTGAGT+TGG - chr8_3:57353630-57353649 Msa1297290:CDS 30.0%
AATTTGATTGGTGAAGGAAA+AGG + chr8_3:57353700-57353719 None:intergenic 30.0%
AAAGACAATTTGATTGGTGA+AGG + chr8_3:57353706-57353725 None:intergenic 30.0%
!! GGTTTTAACATGTTCATACT+TGG + chr8_3:57353910-57353929 None:intergenic 30.0%
GTATGAACATGTTAAAACCA+TGG - chr8_3:57353911-57353930 Msa1297290:CDS 30.0%
! GAATCTTTGAAGAAGACAAT+AGG - chr8_3:57354011-57354030 Msa1297290:CDS 30.0%
CTTTCTTTCTCAAAATGAGA+TGG - chr8_3:57354158-57354177 Msa1297290:CDS 30.0%
! AAAGGTTTTACAACAAGAAC+AGG - chr8_3:57354663-57354682 Msa1297290:CDS 30.0%
! TTTTACAACAAGAACAGGAA+AGG - chr8_3:57354668-57354687 Msa1297290:CDS 30.0%
TAAAAAGATGATCCTCTCTT+TGG + chr8_3:57354720-57354739 None:intergenic 30.0%
ATAAAAGAACCATTGACCAT+AGG + chr8_3:57355076-57355095 None:intergenic 30.0%
! TTTTGTTGGATGGAAAATGT+AGG - chr8_3:57355187-57355206 Msa1297290:CDS 30.0%
!!! ATGTTTTTTTGCTCTCATTG+TGG + chr8_3:57355246-57355265 None:intergenic 30.0%
! ATCTTTCTCCTTTTGCAAAA+GGG + chr8_3:57355522-57355541 None:intergenic 30.0%
TCTTGTAAGATCTCAGAATT+TGG - chr8_3:57355697-57355716 Msa1297290:intron 30.0%
GGAAAATTTCATGAAGAAGA+TGG - chr8_3:57355949-57355968 Msa1297290:CDS 30.0%
GGATATTGAGATGCAAAAAA+GGG - chr8_3:57356030-57356049 Msa1297290:intron 30.0%
AGAAGTGGAAAGTTATTTGA+AGG - chr8_3:57356084-57356103 Msa1297290:intron 30.0%
!! TTTTGAGGAAGAGAAGAATA+GGG - chr8_3:57356120-57356139 Msa1297290:CDS 30.0%
TGACCTAAGAAATAGAGAAT+GGG - chr8_3:57356252-57356271 Msa1297290:CDS 30.0%
TTAAAGAACTTGAGGTTCAA+AGG - chr8_3:57356293-57356312 Msa1297290:CDS 30.0%
TAAAGAACTTGAGGTTCAAA+GGG - chr8_3:57356294-57356313 Msa1297290:CDS 30.0%
GACTGAAGAATTGAAGAAAT+TGG - chr8_3:57356375-57356394 Msa1297290:intron 30.0%
TAAGCATTTCAACAATAGCA+AGG + chr8_3:57356426-57356445 None:intergenic 30.0%
ACCAACAGAAAATATCTTCA+AGG - chr8_3:57356464-57356483 Msa1297290:intron 30.0%
! TCCTTGAAGATATTTTCTGT+TGG + chr8_3:57356468-57356487 None:intergenic 30.0%
!! ATGTTGATAACATTGGCAAT+GGG - chr8_3:57356548-57356567 Msa1297290:CDS 30.0%
!!! AAATTTCCTTTTTTCGTGAG+TGG + chr8_3:57356685-57356704 None:intergenic 30.0%
ACTCACGAAAAAAGGAAATT+TGG - chr8_3:57356684-57356703 Msa1297290:CDS 30.0%
GATACAAATAATGGTAGCAA+TGG - chr8_3:57356718-57356737 Msa1297290:intron 30.0%
CCATTACTAAAATTACCAAG+TGG + chr8_3:57356769-57356788 None:intergenic 30.0%
!! CCACTTGGTAATTTTAGTAA+TGG - chr8_3:57356766-57356785 Msa1297290:intron 30.0%
! GGTACTTCAACAATTACTTT+TGG + chr8_3:57356820-57356839 None:intergenic 30.0%
TCTGTGACTAAAGATGTTAA+TGG - chr8_3:57356880-57356899 Msa1297290:intron 30.0%
CTGTGACTAAAGATGTTAAT+GGG - chr8_3:57356881-57356900 Msa1297290:intron 30.0%
ACAAATAGTGTGTTTCAGTA+GGG + chr8_3:57357082-57357101 None:intergenic 30.0%
AACAAATAGTGTGTTTCAGT+AGG + chr8_3:57357083-57357102 None:intergenic 30.0%
!! TACAAATGATGGATTGTGAT+TGG - chr8_3:57357231-57357250 Msa1297290:intron 30.0%
AATCTCTGATATATCTGACT+GGG + chr8_3:57357508-57357527 None:intergenic 30.0%
GGTGCTTCAAATCATAAAAA+AGG - chr8_3:57357540-57357559 Msa1297290:intron 30.0%
TGTGAATACCTAACAGTAAT+CGG + chr8_3:57357790-57357809 None:intergenic 30.0%
ATCGAAGTAAAATTGATTGG+GGG + chr8_3:57358052-57358071 None:intergenic 30.0%
TAAGGTGTATATACAAAAGC+AGG + chr8_3:57358191-57358210 None:intergenic 30.0%
! AATTTGCAATTGCATCGATA+AGG + chr8_3:57358209-57358228 None:intergenic 30.0%
TGCAATTGCAAATTGCAATT+AGG - chr8_3:57358215-57358234 Msa1297290:intron 30.0%
GATAGTTAGAGACAACATAT+TGG - chr8_3:57358308-57358327 Msa1297290:CDS 30.0%
!! TTCAAATCCAGATTTGCTTT+TGG - chr8_3:57358376-57358395 Msa1297290:CDS 30.0%
TCACAAAATCATCAAGTGTT+CGG + chr8_3:57358450-57358469 None:intergenic 30.0%
!! AGCTCTTGTTTATATTTTGC+TGG - chr8_3:57358527-57358546 Msa1297290:five_prime_UTR 30.0%
TATTATGTTGATGCTGTACT+GGG - chr8_3:57358567-57358586 Msa1297290:five_prime_UTR 30.0%
GTTTGTATATTTAAGCCTCA+AGG - chr8_3:57358634-57358653 Msa1297290:five_prime_UTR 30.0%
GATAGAATCGAAGGTAGAAA+CGG + chr8_3:57351965-57351984 None:intergenic 35.0%
TGAGGAATCGATTAAGCATA+AGG - chr8_3:57352243-57352262 Msa1297290:three_prime_UTR 35.0%
ACTTTGACATTGTTTGTGGT+TGG - chr8_3:57352399-57352418 Msa1297290:three_prime_UTR 35.0%
AAAATCTAGAGATACGGAGT+TGG - chr8_3:57352701-57352720 Msa1297290:intron 35.0%
TTGAAGCTATCACATTGAGT+AGG - chr8_3:57353122-57353141 Msa1297290:intron 35.0%
TGATCATTGCGCAAATTACA+AGG + chr8_3:57353263-57353282 None:intergenic 35.0%
GAAGGATATATGCAATGAGA+GGG + chr8_3:57353391-57353410 None:intergenic 35.0%
CTATAATACACACACATGGA+AGG + chr8_3:57353409-57353428 None:intergenic 35.0%
ACAGTGACCATTCATGTTAT+TGG - chr8_3:57353777-57353796 Msa1297290:CDS 35.0%
AGCTAACGCAGATTTATTCA+TGG + chr8_3:57353973-57353992 None:intergenic 35.0%
CGTTAGCTGAATCAAGAAAA+CGG - chr8_3:57353985-57354004 Msa1297290:CDS 35.0%
GTTAGCTGAATCAAGAAAAC+GGG - chr8_3:57353986-57354005 Msa1297290:CDS 35.0%
!!! TTGCTTTTTGAAGCTTGAGA+AGG - chr8_3:57354190-57354209 Msa1297290:CDS 35.0%
AGCAGAAAAGAAATTTACGG+AGG - chr8_3:57354298-57354317 Msa1297290:CDS 35.0%
GATATAACAGTGTTGCAGAA+AGG - chr8_3:57354369-57354388 Msa1297290:CDS 35.0%
CAGCTGTGATGAAAAAGATA+AGG - chr8_3:57354603-57354622 Msa1297290:CDS 35.0%
ATAAGGAGATGAATCTTGAG+AGG - chr8_3:57354620-57354639 Msa1297290:CDS 35.0%
! AACCTTTTGCCTTTCAGAAA+GGG + chr8_3:57354650-57354669 None:intergenic 35.0%
! AAACCTTTTGCCTTTCAGAA+AGG + chr8_3:57354651-57354670 None:intergenic 35.0%
!! TCATCTTTTTAGTAGATCCC+AGG - chr8_3:57354729-57354748 Msa1297290:CDS 35.0%
TTGAAGACGATCTAATTCCT+GGG + chr8_3:57354749-57354768 None:intergenic 35.0%
TTTGAAGACGATCTAATTCC+TGG + chr8_3:57354750-57354769 None:intergenic 35.0%
AGATCGTCTTCAAAAAGAGT+TGG - chr8_3:57354756-57354775 Msa1297290:CDS 35.0%
! AACCTGTTCTTGTTGTGTAA+GGG + chr8_3:57354860-57354879 None:intergenic 35.0%
ATCTGTATGTTCTCTTCCTA+TGG - chr8_3:57355057-57355076 Msa1297290:CDS 35.0%
AATGTAGGATGAAACTCAGA+AGG - chr8_3:57355202-57355221 Msa1297290:CDS 35.0%
! AGGAGGTTGATCTTAAACAA+CGG - chr8_3:57355345-57355364 Msa1297290:CDS 35.0%
! AAACACAACCCTTTTGCAAA+AGG - chr8_3:57355511-57355530 Msa1297290:intron 35.0%
! CATCTTTCTCCTTTTGCAAA+AGG + chr8_3:57355523-57355542 None:intergenic 35.0%
! ATCTCAGAATTTGGAGCTAT+TGG - chr8_3:57355706-57355725 Msa1297290:CDS 35.0%
! TGATAAGTTGAAAGCTGAGA+AGG - chr8_3:57355736-57355755 Msa1297290:CDS 35.0%
GCGCTCATTCTTAATAAAAG+TGG + chr8_3:57355855-57355874 None:intergenic 35.0%
GGGATATTGAGATGCAAAAA+AGG - chr8_3:57356029-57356048 Msa1297290:intron 35.0%
ATAACCTTATTGAGAAGAGG+CGG - chr8_3:57356059-57356078 Msa1297290:intron 35.0%
!! CTTTTGAGGAAGAGAAGAAT+AGG - chr8_3:57356119-57356138 Msa1297290:CDS 35.0%
GTGACCTAAGAAATAGAGAA+TGG - chr8_3:57356251-57356270 Msa1297290:CDS 35.0%
!! GATGTGGATGTTGATAACAT+TGG - chr8_3:57356541-57356560 Msa1297290:CDS 35.0%
!! GATGTTGATAACATTGGCAA+TGG - chr8_3:57356547-57356566 Msa1297290:CDS 35.0%
GAAAAAAGGAAATTTGGCTG+TGG - chr8_3:57356690-57356709 Msa1297290:CDS 35.0%
GTGGCTTCTGATACAAATAA+TGG - chr8_3:57356709-57356728 Msa1297290:intron 35.0%
!!! TTTTAGTAATGGACGGCAAA+TGG - chr8_3:57356777-57356796 Msa1297290:intron 35.0%
!! TTTAGTAATGGACGGCAAAT+GGG - chr8_3:57356778-57356797 Msa1297290:intron 35.0%
AAATTTGTACCAGTAGGTAG+TGG + chr8_3:57357058-57357077 None:intergenic 35.0%
TAAGTAGTCTAGGTGTAGTA+TGG - chr8_3:57357439-57357458 Msa1297290:intron 35.0%
GAATCTCTGATATATCTGAC+TGG + chr8_3:57357509-57357528 None:intergenic 35.0%
AGATATATCAGAGATTCAGC+AGG - chr8_3:57357512-57357531 Msa1297290:intron 35.0%
! TCGTGTAGTAATGGTTGATA+AGG - chr8_3:57357578-57357597 Msa1297290:intron 35.0%
CTGTGCAGATTATCTTGATT+GGG + chr8_3:57357654-57357673 None:intergenic 35.0%
TCTGTGCAGATTATCTTGAT+TGG + chr8_3:57357655-57357674 None:intergenic 35.0%
ACCACAAGGCAAAATTTCTT+CGG + chr8_3:57357712-57357731 None:intergenic 35.0%
! TGTAACTTCTTTTCTAGGCT+AGG - chr8_3:57357831-57357850 Msa1297290:intron 35.0%
! AAGTTCTTTTCTTGCAATGC+AGG - chr8_3:57358110-57358129 Msa1297290:intron 35.0%
! GATGTCATTTGTTGGTGTAT+TGG - chr8_3:57358132-57358151 Msa1297290:intron 35.0%
TGCAAATTGCAATTAGGATG+AGG - chr8_3:57358221-57358240 Msa1297290:intron 35.0%
GCAAATTGCAATTAGGATGA+GGG - chr8_3:57358222-57358241 Msa1297290:intron 35.0%
GAAAGCAACAATCAAAACCA+TGG + chr8_3:57358359-57358378 None:intergenic 35.0%
GTATTATGTTGATGCTGTAC+TGG - chr8_3:57358566-57358585 Msa1297290:five_prime_UTR 35.0%
AACTCTTGAGTTTCTGTTGT+CGG + chr8_3:57358617-57358636 None:intergenic 35.0%
AAGCTTAGGATAATCGCGTT+TGG - chr8_3:57352093-57352112 Msa1297290:three_prime_UTR 40.0%
TGTCAATTACTCCGAGTTCT+AGG - chr8_3:57352158-57352177 Msa1297290:three_prime_UTR 40.0%
GTCAATTACTCCGAGTTCTA+GGG - chr8_3:57352159-57352178 Msa1297290:three_prime_UTR 40.0%
CTTCTCAAAACCCTAGAACT+CGG + chr8_3:57352172-57352191 None:intergenic 40.0%
TATTGCTAAGCTTGAAGCTG+AGG - chr8_3:57352288-57352307 Msa1297290:three_prime_UTR 40.0%
GGGGATTAATAGGTTTCATC+AGG - chr8_3:57352371-57352390 Msa1297290:three_prime_UTR 40.0%
! GATTATTTGTGATGGTTCGG+TGG - chr8_3:57352514-57352533 Msa1297290:intron 40.0%
! TGTAAGACTGGTGATGTAGT+TGG - chr8_3:57352549-57352568 Msa1297290:intron 40.0%
! GTAAGACTGGTGATGTAGTT+GGG - chr8_3:57352550-57352569 Msa1297290:intron 40.0%
TTGATAAATTGGCGCTGCAA+TGG - chr8_3:57353011-57353030 Msa1297290:CDS 40.0%
GGACTTTACCTAATCAGTTC+CGG - chr8_3:57353143-57353162 Msa1297290:intron 40.0%
GGAAGGATATATGCAATGAG+AGG + chr8_3:57353392-57353411 None:intergenic 40.0%
TGAACTGACCATGAAAGCTA+AGG + chr8_3:57353611-57353630 None:intergenic 40.0%
TCATATGGGCCTTCTCATAT+TGG - chr8_3:57353866-57353885 Msa1297290:CDS 40.0%
CATATTGGAGAGGAAGGAAT+TGG - chr8_3:57353881-57353900 Msa1297290:CDS 40.0%
TACGGAATGTGCTGAAACAA+AGG - chr8_3:57354229-57354248 Msa1297290:CDS 40.0%
! AAGATATAATTTGCCGCCTG+AGG + chr8_3:57354427-57354446 None:intergenic 40.0%
! ATCCCTTTCTGAAAGGCAAA+AGG - chr8_3:57354645-57354664 Msa1297290:CDS 40.0%
TCGTCTTCAAAAAGAGTTGG+AGG - chr8_3:57354759-57354778 Msa1297290:CDS 40.0%
! GAACCTGTTCTTGTTGTGTA+AGG + chr8_3:57354861-57354880 None:intergenic 40.0%
TTATCACAACGCATATCCAC+GGG + chr8_3:57354954-57354973 None:intergenic 40.0%
GTTATCACAACGCATATCCA+CGG + chr8_3:57354955-57354974 None:intergenic 40.0%
TGGATATGCGTTGTGATAAC+AGG - chr8_3:57354955-57354974 Msa1297290:CDS 40.0%
GATAACAGGCACTCACTAAA+TGG - chr8_3:57354969-57354988 Msa1297290:CDS 40.0%
TGTTCTCTTCCTATGGTCAA+TGG - chr8_3:57355064-57355083 Msa1297290:CDS 40.0%
! GGAGGTTGATCTTAAACAAC+GGG - chr8_3:57355346-57355365 Msa1297290:CDS 40.0%
ATCAAGATCACTGAGTGAGA+AGG - chr8_3:57355409-57355428 Msa1297290:intron 40.0%
! TGATAACGCAAAGCAGAGAT+TGG - chr8_3:57355610-57355629 Msa1297290:intron 40.0%
CGACAAGCTAAGAGAAGAAA+AGG - chr8_3:57355874-57355893 Msa1297290:CDS 40.0%
TAACCTTATTGAGAAGAGGC+GGG - chr8_3:57356060-57356079 Msa1297290:intron 40.0%
! GGAAAGAGAAACAGCTTTTG+AGG - chr8_3:57356105-57356124 Msa1297290:intron 40.0%
!! CCTTAAGAGCATCAATATGC+TGG + chr8_3:57356150-57356169 None:intergenic 40.0%
CCAGCATATTGATGCTCTTA+AGG - chr8_3:57356147-57356166 Msa1297290:CDS 40.0%
GGAGAAAGCTGCAAAAGAAT+TGG - chr8_3:57356168-57356187 Msa1297290:CDS 40.0%
AGCTGCAAAAGAATTGGAAC+AGG - chr8_3:57356174-57356193 Msa1297290:CDS 40.0%
AGAATTGGAACAGGTTTCCT+TGG - chr8_3:57356183-57356202 Msa1297290:CDS 40.0%
AGGTTTCCTTGGAGATGAAA+AGG - chr8_3:57356194-57356213 Msa1297290:CDS 40.0%
! TTGAAGCCTTTTCATCTCCA+AGG + chr8_3:57356203-57356222 None:intergenic 40.0%
TGAAAAGGCTTCAAACTGAG+CGG - chr8_3:57356209-57356228 Msa1297290:CDS 40.0%
!! TGAGCGGACTGAGATAAATT+TGG - chr8_3:57356225-57356244 Msa1297290:CDS 40.0%
! CAGCCCATTCTCTATTTCTT+AGG + chr8_3:57356258-57356277 None:intergenic 40.0%
AAGCATCAGACTCTTACACA+AGG - chr8_3:57356496-57356515 Msa1297290:intron 40.0%
ATCAACATCCACATCTTTGC+AGG + chr8_3:57356536-57356555 None:intergenic 40.0%
TTGGAAAATGACAAGCCACT+TGG - chr8_3:57356751-57356770 Msa1297290:intron 40.0%
!! TTAGTAATGGACGGCAAATG+GGG - chr8_3:57356779-57356798 Msa1297290:intron 40.0%
CTAGCATTTCCATCTAGAGA+GGG + chr8_3:57356841-57356860 None:intergenic 40.0%
! TACTTGGCGTTCTTCTGAAA+AGG + chr8_3:57356914-57356933 None:intergenic 40.0%
! TTTTCAGAAGAACGCCAAGT+AGG - chr8_3:57356913-57356932 Msa1297290:intron 40.0%
GGCCAAAAATCCTTTAGATC+AGG - chr8_3:57357032-57357051 Msa1297290:intron 40.0%
! GGCCTGATCTAAAGGATTTT+TGG + chr8_3:57357037-57357056 None:intergenic 40.0%
TAGGGCAAATTTGTACCAGT+AGG + chr8_3:57357064-57357083 None:intergenic 40.0%
! TAAGCCAATGAAAGCACAAG+TGG - chr8_3:57357340-57357359 Msa1297290:intron 40.0%
CATTACTACACGAGCTTCTT+CGG + chr8_3:57357571-57357590 None:intergenic 40.0%
! TCCGAAGAAATTTTGCCTTG+TGG - chr8_3:57357708-57357727 Msa1297290:intron 40.0%
TCCAATACACTAGAACCACA+AGG + chr8_3:57357726-57357745 None:intergenic 40.0%
AGTGTATTGGAGAACACAGA+AGG - chr8_3:57357735-57357754 Msa1297290:intron 40.0%
TGGAGAACACAGAAGGAATA+CGG - chr8_3:57357742-57357761 Msa1297290:intron 40.0%
ACCTGTTTCCGATTACTGTT+AGG - chr8_3:57357779-57357798 Msa1297290:intron 40.0%
ACCTAACAGTAATCGGAAAC+AGG + chr8_3:57357783-57357802 None:intergenic 40.0%
AGCCAGCATTAAGTTATGAG+CGG + chr8_3:57357904-57357923 None:intergenic 40.0%
!! ACTTAATGCTGGCTTTGTAC+AGG - chr8_3:57357910-57357929 Msa1297290:intron 40.0%
!! CTTAATGCTGGCTTTGTACA+GGG - chr8_3:57357911-57357930 Msa1297290:intron 40.0%
! CAATGCAGGATGTCATTTGT+TGG - chr8_3:57358124-57358143 Msa1297290:intron 40.0%
CATTGTGCCAAAAGCAAATC+TGG + chr8_3:57358386-57358405 None:intergenic 40.0%
!! ATTTGCTTTTGGCACAATGC+TGG - chr8_3:57358387-57358406 Msa1297290:CDS 40.0%
!! TTTGCTTTTGGCACAATGCT+GGG - chr8_3:57358388-57358407 Msa1297290:CDS 40.0%
GGCGTGATTGATAGAATCGA+AGG + chr8_3:57351974-57351993 None:intergenic 45.0%
! AATAAGTGCTGTGAGTGCGT+TGG + chr8_3:57351995-57352014 None:intergenic 45.0%
AAGCGAAACGCGATAAGCTT+AGG - chr8_3:57352079-57352098 Msa1297290:three_prime_UTR 45.0%
CGGAGTAATTGACAGAGGTT+TGG + chr8_3:57352152-57352171 None:intergenic 45.0%
GAACTCGGAGTAATTGACAG+AGG + chr8_3:57352157-57352176 None:intergenic 45.0%
CAGATCTGTTCATCGGAAAG+CGG + chr8_3:57352196-57352215 None:intergenic 45.0%
CCGTTTCCAGATCTGTTCAT+CGG + chr8_3:57352203-57352222 None:intergenic 45.0%
CCGATGAACAGATCTGGAAA+CGG - chr8_3:57352200-57352219 Msa1297290:three_prime_UTR 45.0%
AACAGATCTGGAAACGGCTT+AGG - chr8_3:57352206-57352225 Msa1297290:three_prime_UTR 45.0%
ACAGATCTGGAAACGGCTTA+GGG - chr8_3:57352207-57352226 Msa1297290:three_prime_UTR 45.0%
ATGTAGTTGGGCCGTAAAGA+TGG - chr8_3:57352562-57352581 Msa1297290:intron 45.0%
AGTCAAATTACTAGGGCCAG+AGG - chr8_3:57352644-57352663 Msa1297290:intron 45.0%
AAATTACTAGGGCCAGAGGA+AGG - chr8_3:57352648-57352667 Msa1297290:intron 45.0%
! TAGTTTTCTAGGCCTTCCTC+TGG + chr8_3:57352663-57352682 None:intergenic 45.0%
ACTTAGTGAGGTCGGCTAAA+TGG + chr8_3:57352763-57352782 None:intergenic 45.0%
ATTTAGCCGACCTCACTAAG+TGG - chr8_3:57352762-57352781 Msa1297290:intron 45.0%
TTTAGCCGACCTCACTAAGT+GGG - chr8_3:57352763-57352782 Msa1297290:intron 45.0%
AAGTCTTACCCCACTTAGTG+AGG + chr8_3:57352775-57352794 None:intergenic 45.0%
CACTAAGTGGGGTAAGACTT+TGG - chr8_3:57352775-57352794 Msa1297290:CDS 45.0%
!! AGAGTATTGATACGTGCCTG+CGG - chr8_3:57352925-57352944 Msa1297290:CDS 45.0%
!! CTGGTAGTGGTTGATTGTAG+TGG - chr8_3:57353053-57353072 Msa1297290:CDS 45.0%
! GCACAGTGATTCGTGTTGAT+CGG - chr8_3:57353531-57353550 Msa1297290:CDS 45.0%
! TAACCACGCCTTAGCTTTCA+TGG - chr8_3:57353600-57353619 Msa1297290:CDS 45.0%
GCTGGCACCAATAACATGAA+TGG + chr8_3:57353787-57353806 None:intergenic 45.0%
CCTTCCTCTCCAATATGAGA+AGG + chr8_3:57353878-57353897 None:intergenic 45.0%
CCTTCTCATATTGGAGAGGA+AGG - chr8_3:57353875-57353894 Msa1297290:CDS 45.0%
TAACTCAGATGACTCGACCA+TGG + chr8_3:57353931-57353950 None:intergenic 45.0%
TAAAGATCACTCGCTTGCTC+AGG + chr8_3:57354504-57354523 None:intergenic 45.0%
TTCATCACAGCTGTGAGAGA+CGG + chr8_3:57354596-57354615 None:intergenic 45.0%
AGAGGCAATCCCTTTCTGAA+AGG - chr8_3:57354638-57354657 Msa1297290:CDS 45.0%
!!! GCTGGTTTTCTTGTCATGGA+GGG + chr8_3:57354818-57354837 None:intergenic 45.0%
!!! GTAGGCTGGTTTTCTTGTCA+TGG + chr8_3:57354822-57354841 None:intergenic 45.0%
GAAAACCAGCCTACAACTAC+TGG - chr8_3:57354828-57354847 Msa1297290:CDS 45.0%
! CTGTTCTTGTTGTGTAAGGG+TGG + chr8_3:57354857-57354876 None:intergenic 45.0%
CACCCTTACACAACAAGAAC+AGG - chr8_3:57354855-57354874 Msa1297290:CDS 45.0%
! ATTTCTGTCTTGTTCACCCG+TGG - chr8_3:57354935-57354954 Msa1297290:CDS 45.0%
CTCAGAAGGCTATAGCAGAT+CGG - chr8_3:57355216-57355235 Msa1297290:CDS 45.0%
TCAGAAGGCTATAGCAGATC+GGG - chr8_3:57355217-57355236 Msa1297290:CDS 45.0%
GCTACAAATGCAGCGCAAAT+CGG - chr8_3:57355280-57355299 Msa1297290:CDS 45.0%
TTGAGACTAAGAGACGAGCT+TGG - chr8_3:57355315-57355334 Msa1297290:CDS 45.0%
TGAGACTAAGAGACGAGCTT+GGG - chr8_3:57355316-57355335 Msa1297290:CDS 45.0%
GGTTGATCTTAAACAACGGG+AGG - chr8_3:57355349-57355368 Msa1297290:intron 45.0%
CATGTTCCCTTTCCAGGATT+TGG + chr8_3:57355376-57355395 None:intergenic 45.0%
TGAGAAGGAGAAAGACCTAG+TGG - chr8_3:57355424-57355443 Msa1297290:intron 45.0%
ACAAGCCAAGAAAGATCTGC+AGG - chr8_3:57355550-57355569 Msa1297290:CDS 45.0%
AGACTCCTGCAGATCTTTCT+TGG + chr8_3:57355558-57355577 None:intergenic 45.0%
GAAAGATCTGCAGGAGTCTT+TGG - chr8_3:57355559-57355578 Msa1297290:CDS 45.0%
TAACGCAAAGCAGAGATTGG+AGG - chr8_3:57355613-57355632 Msa1297290:intron 45.0%
GAGGTCATCCAAAGTGAAAC+AGG - chr8_3:57355632-57355651 Msa1297290:intron 45.0%
ACAAGTCGCCTGTTTCACTT+TGG + chr8_3:57355643-57355662 None:intergenic 45.0%
! GAATTTGGAGCTATTGGCTG+AGG - chr8_3:57355712-57355731 Msa1297290:CDS 45.0%
! AGGCCAAGTTTGAAGTTGAG+TGG - chr8_3:57355756-57355775 Msa1297290:CDS 45.0%
! GGCCAAGTTTGAAGTTGAGT+GGG - chr8_3:57355757-57355776 Msa1297290:CDS 45.0%
CTCCCACTCAACTTCAAACT+TGG + chr8_3:57355762-57355781 None:intergenic 45.0%
AGCAAGTAACCCCAAGTCAT+GGG + chr8_3:57355921-57355940 None:intergenic 45.0%
TAGCAAGTAACCCCAAGTCA+TGG + chr8_3:57355922-57355941 None:intergenic 45.0%
! TGGGGTTACTTGCTAGTGAA+CGG - chr8_3:57355927-57355946 Msa1297290:CDS 45.0%
CATGAACATGCTGAGTGGTT+TGG - chr8_3:57355974-57355993 Msa1297290:intron 45.0%
CATCAGACTCTTACACAAGG+TGG - chr8_3:57356499-57356518 Msa1297290:intron 45.0%
CATCTTTGCAGGAACTCAAG+CGG + chr8_3:57356525-57356544 None:intergenic 45.0%
CTTGAGTTCCTGCAAAGATG+TGG - chr8_3:57356525-57356544 Msa1297290:CDS 45.0%
CCTGATGACTTCTGCACAAA+TGG + chr8_3:57356583-57356602 None:intergenic 45.0%
CCATTTGTGCAGAAGTCATC+AGG - chr8_3:57356580-57356599 Msa1297290:CDS 45.0%
! CTCTGTGCATCGTTTTATCC+AGG + chr8_3:57356635-57356654 None:intergenic 45.0%
GTGGCGTATCAGGAGAATTT+CGG + chr8_3:57356666-57356685 None:intergenic 45.0%
! TTTTTCGTGAGTGGCGTATC+AGG + chr8_3:57356676-57356695 None:intergenic 45.0%
GATACGCCACTCACGAAAAA+AGG - chr8_3:57356676-57356695 Msa1297290:CDS 45.0%
!! TAGCAATGGGCAAAAGCACT+TGG - chr8_3:57356732-57356751 Msa1297290:intron 45.0%
! CGGCAAATGGGGTTTTCTTT+TGG - chr8_3:57356790-57356809 Msa1297290:intron 45.0%
! GTTGAAGTACCCTCTCTAGA+TGG - chr8_3:57356829-57356848 Msa1297290:intron 45.0%
GCTAGCATTTCCATCTAGAG+AGG + chr8_3:57356842-57356861 None:intergenic 45.0%
TGCTGATCCACTTGTAGATC+TGG - chr8_3:57356975-57356994 Msa1297290:intron 45.0%
ACCAAGAGCAGAAGAACGAA+TGG - chr8_3:57357011-57357030 Msa1297290:intron 45.0%
! TAGGTAGTGGCCTGATCTAA+AGG + chr8_3:57357045-57357064 None:intergenic 45.0%
AGCACCACTTGTGCTTTCAT+TGG + chr8_3:57357347-57357366 None:intergenic 45.0%
CGAAGAAGCTCGTGTAGTAA+TGG - chr8_3:57357569-57357588 Msa1297290:intron 45.0%
!! GCCTTGTGGTTCTAGTGTAT+TGG - chr8_3:57357722-57357741 Msa1297290:intron 45.0%
CTCCGCTCATAACTTAATGC+TGG - chr8_3:57357899-57357918 Msa1297290:intron 45.0%
TTGTACAGGGACTTTGGATG+TGG - chr8_3:57357924-57357943 Msa1297290:intron 45.0%
TGTACAGGGACTTTGGATGT+GGG - chr8_3:57357925-57357944 Msa1297290:intron 45.0%
!! AATTTAACAAATATTATTTA+TGG - chr8_3:57352483-57352502 Msa1297290:intron 5.0%
AGAGCGTGGTGCGCTTTATA+CGG - chr8_3:57351918-57351937 Msa1297290:three_prime_UTR 50.0%
! ATCGCGTTTGGAGTTTGCGA+TGG - chr8_3:57352105-57352124 Msa1297290:three_prime_UTR 50.0%
CGCTTTCCGATGAACAGATC+TGG - chr8_3:57352194-57352213 Msa1297290:three_prime_UTR 50.0%
TAGGGAGGCTGGATTTGATG+AGG - chr8_3:57352225-57352244 Msa1297290:three_prime_UTR 50.0%
TAGTTGGGCCGTAAAGATGG+TGG - chr8_3:57352565-57352584 Msa1297290:intron 50.0%
AGTTGGGCCGTAAAGATGGT+GGG - chr8_3:57352566-57352585 Msa1297290:intron 50.0%
CCGAGTTCCCACCATCTTTA+CGG + chr8_3:57352576-57352595 None:intergenic 50.0%
!! CCGTAAAGATGGTGGGAACT+CGG - chr8_3:57352573-57352592 Msa1297290:intron 50.0%
TTAGCCGACCTCACTAAGTG+GGG - chr8_3:57352764-57352783 Msa1297290:intron 50.0%
CTTACCCCACTTAGTGAGGT+CGG + chr8_3:57352771-57352790 None:intergenic 50.0%
TCATGCGGCGTGTTCCTTAT+AGG - chr8_3:57352828-57352847 Msa1297290:CDS 50.0%
AGCATGGACCGGAACTGATT+AGG + chr8_3:57353154-57353173 None:intergenic 50.0%
TGACCATGAAAGCTAAGGCG+TGG + chr8_3:57353606-57353625 None:intergenic 50.0%
TGGGCCTTCTCATATTGGAG+AGG - chr8_3:57353871-57353890 Msa1297290:CDS 50.0%
GGCGTCAAAGATGCATGCAT+AGG - chr8_3:57354032-57354051 Msa1297290:CDS 50.0%
TTCCGTACGCATCTCATGCA+AGG + chr8_3:57354216-57354235 None:intergenic 50.0%
AAGCGCGTGAAGATATCCTC+AGG - chr8_3:57354408-57354427 Msa1297290:CDS 50.0%
TCATCACAGCTGTGAGAGAC+GGG + chr8_3:57354595-57354614 None:intergenic 50.0%
ATCCTCGCTCAACCAAAGAG+AGG - chr8_3:57354705-57354724 Msa1297290:CDS 50.0%
ATCCTCTCTTTGGTTGAGCG+AGG + chr8_3:57354710-57354729 None:intergenic 50.0%
!!! GGCTGGTTTTCTTGTCATGG+AGG + chr8_3:57354819-57354838 None:intergenic 50.0%
AACCAGCCTACAACTACTGG+AGG - chr8_3:57354831-57354850 Msa1297290:CDS 50.0%
GAGACGAGCTTGGGAATTGA+AGG - chr8_3:57355325-57355344 Msa1297290:CDS 50.0%
ACGAGCTTGGGAATTGAAGG+AGG - chr8_3:57355328-57355347 Msa1297290:CDS 50.0%
GGAGGACCAAATCCTGGAAA+GGG - chr8_3:57355367-57355386 Msa1297290:intron 50.0%
CCAACTCATGTTCCCTTTCC+AGG + chr8_3:57355382-57355401 None:intergenic 50.0%
CCTGGAAAGGGAACATGAGT+TGG - chr8_3:57355379-57355398 Msa1297290:intron 50.0%
GAGCAGTTGACAGTTCCACT+AGG + chr8_3:57355442-57355461 None:intergenic 50.0%
! AAGCCTCAAAGCGTCTGAGA+AGG - chr8_3:57355478-57355497 Msa1297290:intron 50.0%
ACTCCTTCTCAGACGCTTTG+AGG + chr8_3:57355484-57355503 None:intergenic 50.0%
GCAGGAGTCTTTGGCATCTT+TGG - chr8_3:57355568-57355587 Msa1297290:CDS 50.0%
! GGGGTTACTTGCTAGTGAAC+GGG - chr8_3:57355928-57355947 Msa1297290:CDS 50.0%
TGGCACATGAACATGCTGAG+TGG - chr8_3:57355969-57355988 Msa1297290:intron 50.0%
CTTCCCGCCTCTTCTCAATA+AGG + chr8_3:57356066-57356085 None:intergenic 50.0%
! TGGCGTTCTTCTGAAAAGGC+AGG + chr8_3:57356910-57356929 None:intergenic 50.0%
AAGAACGCCAAGTAGGCAGA+GGG - chr8_3:57356920-57356939 Msa1297290:intron 50.0%
! CTCTTTTCCCTCTGCCTACT+TGG + chr8_3:57356930-57356949 None:intergenic 50.0%
CAAGTAGGCAGAGGGAAAAG+AGG - chr8_3:57356928-57356947 Msa1297290:intron 50.0%
TTCTGCGCCAGATCTACAAG+TGG + chr8_3:57356985-57357004 None:intergenic 50.0%
GCCATTCGTTCTTCTGCTCT+TGG + chr8_3:57357015-57357034 None:intergenic 50.0%
TAGATCAGGCCACTACCTAC+TGG - chr8_3:57357046-57357065 Msa1297290:intron 50.0%
TCAGAGATTCAGCAGGTGTC+AGG - chr8_3:57357519-57357538 Msa1297290:intron 50.0%
!! CTGGCTTTGTACAGGGACTT+TGG - chr8_3:57357918-57357937 Msa1297290:intron 50.0%
!! TGGATGTGGGCATTGGTAGT+TGG - chr8_3:57357938-57357957 Msa1297290:intron 50.0%
TGTTGATGCTGTACTGGGCT+AGG - chr8_3:57358572-57358591 Msa1297290:five_prime_UTR 50.0%
GACAGAGGTTTGGCAGAGCT+AGG + chr8_3:57352142-57352161 None:intergenic 55.0%
GATCTGGAAACGGCTTAGGG+AGG - chr8_3:57352210-57352229 Msa1297290:three_prime_UTR 55.0%
!! AGATGGTGGGAACTCGGCAT+CGG - chr8_3:57352579-57352598 Msa1297290:intron 55.0%
!! GAACTCGGCATCGGTGGTTT+GGG - chr8_3:57352588-57352607 Msa1297290:three_prime_UTR 55.0%
ACAAATGGCTGCAGATCCGC+AGG + chr8_3:57352944-57352963 None:intergenic 55.0%
GGCCTTGCATGAGATGCGTA+CGG - chr8_3:57354211-57354230 Msa1297290:CDS 55.0%
CGCGTGAAGATATCCTCAGG+CGG - chr8_3:57354411-57354430 Msa1297290:CDS 55.0%
GCTGTGAGAGACGGGAAAGA+GGG + chr8_3:57354587-57354606 None:intergenic 55.0%
AGCTGTGAGAGACGGGAAAG+AGG + chr8_3:57354588-57354607 None:intergenic 55.0%
ACAACGGGAGGACCAAATCC+TGG - chr8_3:57355361-57355380 Msa1297290:intron 55.0%
GGGAGGACCAAATCCTGGAA+AGG - chr8_3:57355366-57355385 Msa1297290:intron 55.0%
! GTGGTTTGGCAAGATGCAGC+AGG - chr8_3:57355988-57356007 Msa1297290:intron 55.0%
!! AGGAGCGAGCGGATTTTCAG+CGG - chr8_3:57356008-57356027 Msa1297290:intron 55.0%
TGAGAAGAGGCGGGAAGAAG+TGG - chr8_3:57356069-57356088 Msa1297290:intron 55.0%
GAGAATCGAGCAGCACTAGC+AGG + chr8_3:57356613-57356632 None:intergenic 55.0%
! CTAGTGCTGCTCGATTCTCC+TGG - chr8_3:57356614-57356633 Msa1297290:CDS 55.0%
GAAGAACGCCAAGTAGGCAG+AGG - chr8_3:57356919-57356938 Msa1297290:intron 55.0%
GGGACTTTGGATGTGGGCAT+TGG - chr8_3:57357931-57357950 Msa1297290:intron 55.0%
! GCTTTTGGCACAATGCTGGG+TGG - chr8_3:57358391-57358410 Msa1297290:CDS 55.0%
TGGAAACGGCTTAGGGAGGC+TGG - chr8_3:57352214-57352233 Msa1297290:three_prime_UTR 60.0%
!! GGAACTCGGCATCGGTGGTT+TGG - chr8_3:57352587-57352606 Msa1297290:three_prime_UTR 60.0%
GGCCTCCAGTAGTTGTAGGC+TGG + chr8_3:57354836-57354855 None:intergenic 60.0%
GGGTGGCCTCCAGTAGTTGT+AGG + chr8_3:57354840-57354859 None:intergenic 60.0%
CAAGATGCAGCAGGAGCGAG+CGG - chr8_3:57355997-57356016 Msa1297290:intron 60.0%
!! GGAGCGAGCGGATTTTCAGC+GGG - chr8_3:57356009-57356028 Msa1297290:intron 60.0%
! TGGTGGGAACTCGGCATCGG+TGG - chr8_3:57352582-57352601 Msa1297290:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 57351911 57358664 57351911 ID=Msa1297290;Name=Msa1297290
chr8_3 mRNA 57351911 57358664 57351911 ID=Msa1297290-mRNA-1;Parent=Msa1297290;Name=Msa1297290-mRNA-1;_AED=0.04;_eAED=0.04;_QI=213|1|1|1|0.75|0.77|9|596|1056
chr8_3 exon 57351911 57352443 57351911 ID=Msa1297290-mRNA-1:exon:16459;Parent=Msa1297290-mRNA-1
chr8_3 exon 57352581 57352643 57352581 ID=Msa1297290-mRNA-1:exon:16458;Parent=Msa1297290-mRNA-1
chr8_3 exon 57352775 57353081 57352775 ID=Msa1297290-mRNA-1:exon:16457;Parent=Msa1297290-mRNA-1
chr8_3 exon 57353508 57355366 57353508 ID=Msa1297290-mRNA-1:exon:16456;Parent=Msa1297290-mRNA-1
chr8_3 exon 57355515 57355598 57355515 ID=Msa1297290-mRNA-1:exon:16455;Parent=Msa1297290-mRNA-1
chr8_3 exon 57355699 57355969 57355699 ID=Msa1297290-mRNA-1:exon:16454;Parent=Msa1297290-mRNA-1
chr8_3 exon 57356119 57356372 57356119 ID=Msa1297290-mRNA-1:exon:16453;Parent=Msa1297290-mRNA-1
chr8_3 exon 57356517 57356726 57356517 ID=Msa1297290-mRNA-1:exon:16452;Parent=Msa1297290-mRNA-1
chr8_3 exon 57358266 57358664 57358266 ID=Msa1297290-mRNA-1:exon:16451;Parent=Msa1297290-mRNA-1
chr8_3 five_prime_UTR 57358452 57358664 57358452 ID=Msa1297290-mRNA-1:five_prime_utr;Parent=Msa1297290-mRNA-1
chr8_3 CDS 57358266 57358451 57358266 ID=Msa1297290-mRNA-1:cds;Parent=Msa1297290-mRNA-1
chr8_3 CDS 57356517 57356726 57356517 ID=Msa1297290-mRNA-1:cds;Parent=Msa1297290-mRNA-1
chr8_3 CDS 57356119 57356372 57356119 ID=Msa1297290-mRNA-1:cds;Parent=Msa1297290-mRNA-1
chr8_3 CDS 57355699 57355969 57355699 ID=Msa1297290-mRNA-1:cds;Parent=Msa1297290-mRNA-1
chr8_3 CDS 57355515 57355598 57355515 ID=Msa1297290-mRNA-1:cds;Parent=Msa1297290-mRNA-1
chr8_3 CDS 57353508 57355366 57353508 ID=Msa1297290-mRNA-1:cds;Parent=Msa1297290-mRNA-1
chr8_3 CDS 57352775 57353081 57352775 ID=Msa1297290-mRNA-1:cds;Parent=Msa1297290-mRNA-1
chr8_3 three_prime_UTR 57352581 57352643 57352581 ID=Msa1297290-mRNA-1:three_prime_utr;Parent=Msa1297290-mRNA-1
chr8_3 three_prime_UTR 57351911 57352443 57351911 ID=Msa1297290-mRNA-1:three_prime_utr;Parent=Msa1297290-mRNA-1
Gene Sequence

>Msa1297290

ATGGAGATTTCGACACCTAGCTCTGCCAAACCTCTGTCAATTACTCCGAGTTCTAGGGTTTTGAGAAGTCCGCTTTCCGATGAACAGATCTGGAAACGGCTTAGGGAGGCTGGATTTGATGAGGAATCGATTAAGCATAAGGATAAAGCTGCGCTTGTAGCTTATATTGCTAAGCTTGAAGCTGAGATATATGATCATCAACATCATATGGGCCTTCTCATATTGGAGAGGAAGGAATTGGTTTCCAAGTATGAACATGTTAAAACCATGGTCGAGTCATCTGAGTTAGTGCATAACCGTGATTTATCCATGAATAAATCTGCGTTAGCTGAATCAAGAAAACGGGAAGAATCTTTGAAGAAGACAATAGGCGTCAAAGATGCATGCATAGGAAGTCTTGAGAAGGCCTTGCATGAGATGCGTACGGAATGTGCTGAAACAAAGGTTGCAGCTGAAAGTAAATTAGCTGAAGCACATCAATTGACAGATGAAGCAGAAAAGAAATTTACGGAGGCTGAAGCTAAAGTGCGTGCTGCAGAATCTTTGCAAGCAGATGCTAATCGATATAACAGTGTTGCAGAAAGGAAGCTTCGTGATGTTGAAGCGCGTGAAGATATCCTCAGGCGGCAAATTATATCTTTCAAGTCAGACTGTGATGAAAAAGATAAGGAGATGAATCTTGAGAGGCAATCCCTTTCTGAAAGGCAAAAGGTTTTACAACAAGAACAGGAAAGGTTACTTCAATCACAATCCTCGCTCAACCAAAGAGAGGATCATCTTTTTAGTAGATCCCAGGAATTAGATCGTCTTCAAAAAGAGTTGGAGGACACAAAGTTTAAACTTGAAAAGGAAAATGAAGCCCTCCATGACAAGAAAACCAGCCTACAACTACTGGAGGCCACCCTTACACAACAAGAACAGGCACTCACTAAATGGAAAACTGAGCTTAACAAGAAAGAGCAAGAGTTGCTTGAATTTGAAGTGAAACTTTCTAATAGAGAATCTGATGAAACTCAGAAGGCTATAGCAGATCGGGAAGCCACAATGAGAGCAAAAAAACATGATTTAGAAGTTGAGCTACAAATGCAGCGCAAATCGGTTGAAAATGAAATTGAGACTAAGAGACGAGCTTGGGAATTGAAGGAGGTTGATCTTAAACAACGGGAGGACCAAATCCTGGAAAGGGAACATGAGTTGGAAGTTCTATCAAGATCACTGAGTGAGAAGGAGAAAGACCTAGTGGAACTGTCAACTGCTCTTAAAGATAAAGATCAAAGCCTCAAAGCGTCTGAGAAGGAGTTTGAATTAAACACAACCCTTTTGCAAAAGGAGAAAGATGATATTGAACAAGCCAAGAAAGATCTGCAGGAGTCTTTGGCATCTTTGGAAAATGAAAAAAGACAAGTTGATAACGCAAAGCAGAGATTGGAGGTCATCCAAAGTGAAACAGGCGACTTGTCAATTTTTGAAGTGAAACTAAAGGAAGAGATTGATCTTGTAAGATCTCAGAATTTGGAGCTATTGGCTGAGGCTGATAAGTTGAAAGCTGAGAAGGCCAAGTTTGAAGTTGAGTGGGAGCTTCTTGATGAAAAAAAAGAAGAGTTGCGGAAAGAAGCAGAATTTATAGAAAATGAAAGGAAGGCAGTTTCCACTTTTATTAAGAATGAGCGCGACAAGCTAAGAGAAGAAAAGGAAAATTTGCGTAAACAGTACACCCATGACTTGGGGTTACTTGCTAGTGAACGGGAAAATTTCATGAAGAAGATGGCACATGAACATGCTGAGTGGTTTGGCAAGATGCAGCAGGAGCGAGCGGATTTTCAGCGGGATATTGAGATGCAAAAAAGGGAGCTAAATAACCTTATTGAGAAGAGGCGGGAAGAAGTGGAAAGTTATTTGAAGGAAAGAGAAACAGCTTTTGAGGAAGAGAAGAATAGGGAGCTCCAGCATATTGATGCTCTTAAGGAGAAAGCTGCAAAAGAATTGGAACAGGTTTCCTTGGAGATGAAAAGGCTTCAAACTGAGCGGACTGAGATAAATTTGGATCGTGACCTAAGAAATAGAGAATGGGCTGAACTAAATAATTGTATTAAAGAACTTGAGGTTCAAAGGGATAAACTACAAAAACAGAGAGAACTGTTGCATGCTGATAGAATCAACATTTATTCTAAGACTGAAGAATTGAAGAAATTGGAAGATTCAAAAGTTGTCTCTGATGACCTTGCTATTGTTGAAATGCTTAAATCTGATATGGAGTATAACCAACAGAAAATATCTTCAAGGAAAAATTTGAAGCATCAGACTCTTACACAAGGTGGCCGCTTGAGTTCCTGCAAAGATGTGGATGTTGATAACATTGGCAATGGGTTTGATACTCCATTTGTGCAGAAGTCATCAGGTGTTTCTCCTGCTAGTGCTGCTCGATTCTCCTGGATAAAACGATGCACAGAGCTAATATTCCGAAATTCTCCTGATACGCCACTCACGAAAAAAGGAAATTTGGCTGTGGCTTCTGATACAAATAATGGTAGCAATGGGCAAAAGCACTTGGAAAATGACAAGCCACTTGGTAATTTTAGTAATGGACGGCAAATGGGGTTTTCTTTTGGAGAACCAAAAGTAATTGTTGAAGTACCCTCTCTAGATGGAAATGCTAGCAGAACAAGCGAGCTCAAATCTGTGACTAAAGATGTTAATGGGAAACCTGCCTTTTCAGAAGAACGCCAAGTAGGCAGAGGGAAAAGAGGCAGAGAGAACTTGATTACTAAAGTTGCTGATCCACTTGTAGATCTGGCGCAGAATAAGAAACCAAGAGCAGAAGAACGAATGGCCAAAAATCCTTTAGATCAGGCCACTACCTACTGTGTGCATTCAACCCAGTCAGATATATCAGAGATTCAGCAGGTGTCAGGTGCTTCAAATCATAAAAAAGGGAACACCGAAGAAGCTCGTGTAGTAATGGTTGATAAGGTTATTCATGTTTCAGAAGTGACTTCTGAAAAAGTTGATACTCTCATCATTCCCAATCAAGATAATCTGCACAGAGAAACAATCGATCAGTCAAACTCTAAAACTAGATCCGAAGAAATTTTGCCTTGTGGTTCTAGTGTATTGGAGAACACAGAAGGAATACGGCAAGAAAACACTGAACCTGTTTCCGATTACTGTTAG

Protein sequence

>Msa1297290

MEISTPSSAKPLSITPSSRVLRSPLSDEQIWKRLREAGFDEESIKHKDKAALVAYIAKLEAEIYDHQHHMGLLILERKELVSKYEHVKTMVESSELVHNRDLSMNKSALAESRKREESLKKTIGVKDACIGSLEKALHEMRTECAETKVAAESKLAEAHQLTDEAEKKFTEAEAKVRAAESLQADANRYNSVAERKLRDVEAREDILRRQIISFKSDCDEKDKEMNLERQSLSERQKVLQQEQERLLQSQSSLNQREDHLFSRSQELDRLQKELEDTKFKLEKENEALHDKKTSLQLLEATLTQQEQALTKWKTELNKKEQELLEFEVKLSNRESDETQKAIADREATMRAKKHDLEVELQMQRKSVENEIETKRRAWELKEVDLKQREDQILEREHELEVLSRSLSEKEKDLVELSTALKDKDQSLKASEKEFELNTTLLQKEKDDIEQAKKDLQESLASLENEKRQVDNAKQRLEVIQSETGDLSIFEVKLKEEIDLVRSQNLELLAEADKLKAEKAKFEVEWELLDEKKEELRKEAEFIENERKAVSTFIKNERDKLREEKENLRKQYTHDLGLLASERENFMKKMAHEHAEWFGKMQQERADFQRDIEMQKRELNNLIEKRREEVESYLKERETAFEEEKNRELQHIDALKEKAAKELEQVSLEMKRLQTERTEINLDRDLRNREWAELNNCIKELEVQRDKLQKQRELLHADRINIYSKTEELKKLEDSKVVSDDLAIVEMLKSDMEYNQQKISSRKNLKHQTLTQGGRLSSCKDVDVDNIGNGFDTPFVQKSSGVSPASAARFSWIKRCTELIFRNSPDTPLTKKGNLAVASDTNNGSNGQKHLENDKPLGNFSNGRQMGFSFGEPKVIVEVPSLDGNASRTSELKSVTKDVNGKPAFSEERQVGRGKRGRENLITKVADPLVDLAQNKKPRAEERMAKNPLDQATTYCVHSTQSDISEIQQVSGASNHKKGNTEEARVVMVDKVIHVSEVTSEKVDTLIIPNQDNLHRETIDQSNSKTRSEEILPCGSSVLENTEGIRQENTEPVSDYC*