AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0682330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0682330 MtrunA17_Chr4g0028461 94.253 261 12 2 88 348 67 324 2.14e-154 436
Msa0682330 MtrunA17_Chr2g0327311 54.762 168 67 3 89 249 67 232 7.59e-47 162
Msa0682330 MtrunA17_Chr7g0264601 36.982 338 134 9 88 348 14 349 1.52e-43 153
Msa0682330 MtrunA17_Chr1g0180631 38.855 332 144 6 69 348 9 333 1.54e-39 142
Msa0682330 MtrunA17_Chr3g0094841 29.851 268 134 6 83 348 22 237 2.97e-28 110
Msa0682330 MtrunA17_Chr8g0386231 31.930 285 153 7 89 348 53 321 2.06e-27 109
Msa0682330 MtrunA17_Chr2g0290471 34.351 262 142 5 89 348 36 269 1.36e-22 95.5
Msa0682330 MtrunA17_Chr3g0128091 28.996 269 162 5 87 347 36 283 3.16e-21 92.0
Msa0682330 MtrunA17_Chr3g0132051 34.194 155 99 2 89 242 36 188 2.51e-20 89.4
Msa0682330 MtrunA17_Chr3g0132061 34.839 155 99 2 89 242 36 189 5.81e-20 89.0
Msa0682330 MtrunA17_Chr8g0337951 29.368 269 143 6 88 345 30 262 9.89e-20 87.4
Msa0682330 MtrunA17_Chr5g0429111 28.125 160 106 2 90 249 56 206 1.37e-15 76.6
Msa0682330 MtrunA17_Chr4g0001151 36.667 120 74 2 89 207 170 288 1.61e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0682330 AT5G60800.1 49.091 275 106 4 89 348 28 283 1.98e-56 185
Msa0682330 AT5G60800.2 48.727 275 107 4 89 348 28 283 2.40e-55 183
Msa0682330 AT5G03380.1 38.889 234 99 5 54 254 2 224 2.26e-37 138
Msa0682330 AT5G03380.2 40.609 197 84 3 91 254 1 197 1.45e-35 133
Msa0682330 AT2G36950.1 35.714 336 137 8 90 348 53 386 3.20e-32 124
Msa0682330 AT3G02960.1 31.081 296 143 8 59 348 6 246 4.94e-32 120
Msa0682330 AT2G28090.1 44.022 184 86 5 75 249 12 187 2.23e-31 119
Msa0682330 AT5G50740.5 31.481 270 160 5 89 348 29 283 4.31e-28 111
Msa0682330 AT5G50740.1 31.481 270 160 5 89 348 29 283 4.31e-28 111
Msa0682330 AT5G50740.3 31.481 270 160 5 89 348 36 290 8.02e-28 110
Msa0682330 AT5G24580.4 26.523 279 165 5 90 347 59 318 4.35e-22 95.5
Msa0682330 AT5G24580.1 26.523 279 165 5 90 347 59 318 4.35e-22 95.5
Msa0682330 AT5G24580.2 26.523 279 165 5 90 347 58 317 5.17e-22 95.1
Msa0682330 AT5G24580.3 26.165 279 163 6 90 347 59 315 8.28e-19 86.3
Msa0682330 AT5G63530.2 37.107 159 89 4 89 241 60 213 1.52e-18 85.9
Msa0682330 AT5G63530.1 37.107 159 89 4 89 241 75 228 1.52e-18 85.9
Msa0682330 AT5G50740.2 39.695 131 61 3 89 210 29 150 1.85e-18 82.0
Msa0682330 AT5G50740.4 39.695 131 61 3 89 210 36 157 4.02e-18 81.3
Msa0682330 AT1G29000.1 32.298 161 108 1 90 249 18 178 1.71e-16 79.3
Msa0682330 AT1G29000.2 32.298 161 108 1 90 249 18 178 1.71e-16 79.3
Msa0682330 AT5G24580.5 25.410 244 142 5 125 347 7 231 2.42e-14 72.0
Msa0682330 AT3G05220.1 54.237 59 27 0 85 143 8 66 8.97e-12 66.6
Msa0682330 AT5G19090.2 47.619 84 42 2 85 168 8 89 2.58e-11 65.1
Msa0682330 AT5G19090.3 47.619 84 42 2 85 168 8 89 2.58e-11 65.1
Msa0682330 AT5G19090.5 47.619 84 42 2 85 168 8 89 3.40e-11 64.7
Msa0682330 AT5G19090.4 47.619 84 42 2 85 168 8 89 3.40e-11 64.7
Msa0682330 AT5G19090.1 47.619 84 42 2 85 168 8 89 3.40e-11 64.7
Msa0682330 AT3G06130.1 54.237 59 27 0 85 143 8 66 4.49e-11 64.3
Msa0682330 AT3G06130.2 54.237 59 27 0 85 143 8 66 4.81e-11 63.5

Find 86 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTGTTGTTATCCTTCT+TGG 0.114690 4_4:-43691706 None:intergenic
CCACCTTCCTTGTCTTTCTT+TGG 0.170033 4_4:-43692228 None:intergenic
CTAAAACGAATTATTAAAAT+TGG 0.226900 4_4:-43692802 None:intergenic
GTTCAACAACCCTTTGGTTT+TGG 0.232508 4_4:+43692372 Msa0682330:CDS
TTTCATTCAATTCAACTTGA+TGG 0.291291 4_4:+43692559 Msa0682330:three_prime_UTR
ATTCCATGAGACAGGGAAAA+AGG 0.302499 4_4:+43692640 Msa0682330:three_prime_UTR
GAGTAATGTGAATGATGATA+TGG 0.302818 4_4:+43692855 Msa0682330:three_prime_UTR
TTTGGAATTGGAATTGGAAT+TGG 0.333244 4_4:-43690894 None:intergenic
AGAAGAAGAAAAGTGTGATT+TGG 0.337019 4_4:-43690912 None:intergenic
AGAAAAGTGTGATTTGGAAT+TGG 0.346947 4_4:-43690906 None:intergenic
TTCTTGTTGTTATCCTTCTT+GGG 0.350090 4_4:-43691705 None:intergenic
GATGGAAATGAAGGAGGAGG+TGG 0.350616 4_4:+43692267 Msa0682330:CDS
GGAAATGAAGGAGGAGGTGG+GGG 0.362659 4_4:+43692270 Msa0682330:CDS
AGTTAAGATAATGGAGTATA+TGG 0.364486 4_4:+43692350 Msa0682330:CDS
GTGTGATTTGGAATTGGAAT+TGG 0.365278 4_4:-43690900 None:intergenic
ATTTATCACAGAAGCTTAAG+AGG 0.379478 4_4:+43692187 Msa0682330:CDS
TGGAAATGAAGGAGGAGGTG+GGG 0.385436 4_4:+43692269 Msa0682330:CDS
CAAGGATGTATTGATAAGAT+TGG 0.393223 4_4:+43691928 Msa0682330:CDS
AGGAGGAGAAGTTAAGATAA+TGG 0.394798 4_4:+43692341 Msa0682330:CDS
TTTGATGCTGTTAAGGTGTT+TGG 0.396644 4_4:-43691402 None:intergenic
ACAGTAGACATCATATCATA+TGG 0.412701 4_4:+43692774 Msa0682330:three_prime_UTR
TGAAACCTTTGATGCTGTTA+AGG 0.424806 4_4:-43691409 None:intergenic
TATGAATATTTAACATCTCT+TGG 0.426178 4_4:-43692440 None:intergenic
GACAAGGAAGGTGGTGGTGG+TGG 0.446982 4_4:+43692237 Msa0682330:CDS
ATGGAAATGAAGGAGGAGGT+GGG 0.453141 4_4:+43692268 Msa0682330:CDS
AAGGATGTATTGATAAGATT+GGG 0.459716 4_4:+43691929 Msa0682330:CDS
TTGTTATCCTTCTTGGGAAG+TGG 0.460354 4_4:-43691699 None:intergenic
TATATGGTTCAACAACCCTT+TGG 0.467046 4_4:+43692366 Msa0682330:CDS
GGTGGTGGTGGTGAGAAGGA+TGG 0.477883 4_4:+43692249 Msa0682330:CDS
TTCTCATCACTAAACATTTG+TGG 0.482907 4_4:-43692477 None:intergenic
GTGAAAGCAGAGAGTGAAAC+CGG 0.483162 4_4:+43691588 Msa0682330:CDS
CAACAATGGAGGAGATAAGA+AGG 0.494392 4_4:+43691301 Msa0682330:CDS
GGGGTCCACATTTCCGGTGA+CGG 0.497438 4_4:-43691619 None:intergenic
CTTTCTTCTCTCCTCCATTG+TGG 0.500142 4_4:-43691238 None:intergenic
CCATTGTTGAAAGGTGTTGA+AGG 0.501520 4_4:-43690946 None:intergenic
CATTTCACCACTTCCCAAGA+AGG 0.504323 4_4:+43691692 Msa0682330:CDS
GATGGTAATAACAATGAAGC+AGG 0.507061 4_4:+43692321 Msa0682330:CDS
AAAGACAAGGAAGGTGGTGG+TGG 0.508002 4_4:+43692234 Msa0682330:CDS
CAACAACAATGAAGGGAACA+AGG 0.513207 4_4:+43691196 Msa0682330:CDS
TGATGAATGATGGATGATAA+TGG 0.515149 4_4:+43692592 Msa0682330:three_prime_UTR
CACATGACAATGCAAGCATT+AGG 0.517378 4_4:-43692501 None:intergenic
AAAATTGTTATGAAAACTAA+AGG 0.517522 4_4:+43691952 Msa0682330:CDS
TTTCCATACCCAAAACCAAA+GGG 0.517695 4_4:-43692381 None:intergenic
GAGGTAAGAAGAAGAACAAG+GGG 0.518923 4_4:+43692292 Msa0682330:CDS
ATCACAGAAGCTTAAGAGGA+AGG 0.524713 4_4:+43692191 Msa0682330:CDS
TGATGAATGGTGATGAATGA+TGG 0.524827 4_4:+43692582 Msa0682330:three_prime_UTR
AAGGATGGAAATGAAGGAGG+AGG 0.528175 4_4:+43692264 Msa0682330:CDS
TATGGAAATGTAAATGTTGA+AGG 0.530190 4_4:+43692396 Msa0682330:CDS
CCTTCAACACCTTTCAACAA+TGG 0.534794 4_4:+43690946 Msa0682330:exon
ACCGGAAAAGTAACCGTCAC+CGG 0.547833 4_4:+43691606 Msa0682330:CDS
GAAGCTTAAGAGGAAGGTTG+AGG 0.551168 4_4:+43692197 Msa0682330:CDS
AAACACCTTAACAGCATCAA+AGG 0.557937 4_4:+43691404 Msa0682330:CDS
GGTGAGAAGGATGGAAATGA+AGG 0.559036 4_4:+43692258 Msa0682330:CDS
TTATTACCGCCATTGTTGAA+AGG 0.559447 4_4:-43690955 None:intergenic
TGTTGAAAGGTGTTGAAGGA+AGG 0.560245 4_4:-43690942 None:intergenic
GGTAAGAAGAAGAACAAGGG+GGG 0.560885 4_4:+43692294 Msa0682330:CDS
AAGGACAATGTGACTGTGAA+GGG 0.564120 4_4:+43692135 Msa0682330:CDS
AGGTAAGAAGAAGAACAAGG+GGG 0.566617 4_4:+43692293 Msa0682330:CDS
TACCAATTTCAAAACAGAAG+TGG 0.568866 4_4:-43691896 None:intergenic
AGTAATGTGAATGATGATAT+GGG 0.569114 4_4:+43692856 Msa0682330:three_prime_UTR
AGTAACCGTCACCGGAAATG+TGG 0.571019 4_4:+43691614 Msa0682330:CDS
GAGAAGGATGGAAATGAAGG+AGG 0.571182 4_4:+43692261 Msa0682330:CDS
CAAGAAGGATAACAACAAGA+AGG 0.577155 4_4:+43691707 Msa0682330:CDS
AAAGTTTATATGCATTGCGA+AGG 0.581995 4_4:+43691362 Msa0682330:CDS
AATGAAAGTTGATAAAGAGA+AGG 0.588678 4_4:+43692116 Msa0682330:CDS
GAAGGACAATGTGACTGTGA+AGG 0.599867 4_4:+43692134 Msa0682330:CDS
GGAGGTAAGAAGAAGAACAA+GGG 0.601818 4_4:+43692291 Msa0682330:CDS
GGGAGGTAAGAAGAAGAACA+AGG 0.606219 4_4:+43692290 Msa0682330:CDS
TTCAACTTGATGGTGATGAA+TGG 0.606746 4_4:+43692569 Msa0682330:three_prime_UTR
ATTTCCATACCCAAAACCAA+AGG 0.607513 4_4:-43692382 None:intergenic
ATGGAAATGTAAATGTTGAA+GGG 0.608459 4_4:+43692397 Msa0682330:CDS
GATAATGGTGATGATGATGA+TGG 0.610461 4_4:+43692607 Msa0682330:three_prime_UTR
AACAACAACAACCACAATGG+AGG 0.618101 4_4:+43691227 Msa0682330:CDS
AAGAAGGAAGAGAACAACAA+AGG 0.625603 4_4:+43691317 Msa0682330:CDS
AAATTGGTACTACACTGTCA+AGG 0.625937 4_4:+43691910 Msa0682330:CDS
TCATCACTAAACATTTGTGG+TGG 0.630320 4_4:-43692474 None:intergenic
TTTGTTGATTCCATGAGACA+GGG 0.631407 4_4:+43692633 Msa0682330:three_prime_UTR
AAGAAAGACAAGGAAGGTGG+TGG 0.634788 4_4:+43692231 Msa0682330:CDS
GGTAATAACAATGAAGCAGG+AGG 0.639502 4_4:+43692324 Msa0682330:CDS
GGAGGAGAGAAGAACAACAA+TGG 0.646517 4_4:+43691287 Msa0682330:CDS
TCAACACCTTTCAACAATGG+CGG 0.648351 4_4:+43690949 Msa0682330:exon
CCAAAGAAAGACAAGGAAGG+TGG 0.648516 4_4:+43692228 Msa0682330:CDS
TGTGACTGTGAAGGGTACAA+TGG 0.654271 4_4:+43692143 Msa0682330:CDS
CAACCAAAGAAAGACAAGGA+AGG 0.655515 4_4:+43692225 Msa0682330:CDS
GGAGAGAAGAACAACAATGG+AGG 0.671058 4_4:+43691290 Msa0682330:CDS
AGTTCAACCAAAGAAAGACA+AGG 0.673352 4_4:+43692221 Msa0682330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGATTTGTTTTAATTTTT+TGG + chr4_4:43691835-43691854 Msa0682330:intron 10.0%
!!! AATGATTTGTTTTAATTTTT+TGG + chr4_4:43691835-43691854 Msa0682330:intron 10.0%
!! CAAAACAAAAACAAAAAAAT+GGG - chr4_4:43691066-43691085 None:intergenic 15.0%
!! ACAAAACAAAAACAAAAAAA+TGG - chr4_4:43691067-43691086 None:intergenic 15.0%
!! TAGATAAAAACAAGTTATTA+AGG - chr4_4:43691494-43691513 None:intergenic 15.0%
!!! TTTTTTTGTGTGTTTTTTTA+AGG + chr4_4:43691555-43691574 Msa0682330:intron 15.0%
!! AAAATTGTTATGAAAACTAA+AGG + chr4_4:43691952-43691971 Msa0682330:CDS 15.0%
!! AAAACATTAAAAAAGAAAAG+TGG - chr4_4:43692712-43692731 None:intergenic 15.0%
!!! TTTCTTTTTTAATGTTTTAG+TGG + chr4_4:43692714-43692733 Msa0682330:three_prime_UTR 15.0%
!! CTAAAACGAATTATTAAAAT+TGG - chr4_4:43692805-43692824 None:intergenic 15.0%
!! CAAAACAAAAACAAAAAAAT+GGG - chr4_4:43691066-43691085 None:intergenic 15.0%
!! ACAAAACAAAAACAAAAAAA+TGG - chr4_4:43691067-43691086 None:intergenic 15.0%
!! TAGATAAAAACAAGTTATTA+AGG - chr4_4:43691494-43691513 None:intergenic 15.0%
!!! TTTTTTTGTGTGTTTTTTTA+AGG + chr4_4:43691555-43691574 Msa0682330:intron 15.0%
!! AAAATTGTTATGAAAACTAA+AGG + chr4_4:43691952-43691971 Msa0682330:CDS 15.0%
!! AAAACATTAAAAAAGAAAAG+TGG - chr4_4:43692712-43692731 None:intergenic 15.0%
!!! TTTCTTTTTTAATGTTTTAG+TGG + chr4_4:43692714-43692733 Msa0682330:three_prime_UTR 15.0%
!! CTAAAACGAATTATTAAAAT+TGG - chr4_4:43692805-43692824 None:intergenic 15.0%
!! AAACACACAAAAAAAAAACA+TGG - chr4_4:43691550-43691569 None:intergenic 20.0%
!!! TTTTCTTTCTTTCTATGATT+TGG + chr4_4:43692015-43692034 Msa0682330:intron 20.0%
!! TATGAATATTTAACATCTCT+TGG - chr4_4:43692443-43692462 None:intergenic 20.0%
!! AAACACACAAAAAAAAAACA+TGG - chr4_4:43691550-43691569 None:intergenic 20.0%
!!! TTTTCTTTCTTTCTATGATT+TGG + chr4_4:43692015-43692034 Msa0682330:intron 20.0%
!! TATGAATATTTAACATCTCT+TGG - chr4_4:43692443-43692462 None:intergenic 20.0%
! TTACAGAAGAAGAAAAACAA+GGG + chr4_4:43691089-43691108 Msa0682330:intron 25.0%
! AACAACAAAAACAACAACAA+TGG + chr4_4:43691266-43691285 Msa0682330:CDS 25.0%
! GAAAAAATGTATAGAAACAG+AGG - chr4_4:43691448-43691467 None:intergenic 25.0%
!!! TTCTCATCAGATTTTTTGTT+TGG - chr4_4:43691741-43691760 None:intergenic 25.0%
! GAAAAATGAAGACAAAAAAG+AGG + chr4_4:43691761-43691780 Msa0682330:CDS 25.0%
!! AAGGATGTATTGATAAGATT+GGG + chr4_4:43691929-43691948 Msa0682330:CDS 25.0%
!!! AATGAAAGTTGATAAAGAGA+AGG + chr4_4:43692116-43692135 Msa0682330:CDS 25.0%
!!! AGTTAAGATAATGGAGTATA+TGG + chr4_4:43692350-43692369 Msa0682330:CDS 25.0%
! TATGGAAATGTAAATGTTGA+AGG + chr4_4:43692396-43692415 Msa0682330:CDS 25.0%
! ATGGAAATGTAAATGTTGAA+GGG + chr4_4:43692397-43692416 Msa0682330:CDS 25.0%
! TTTCATTCAATTCAACTTGA+TGG + chr4_4:43692559-43692578 Msa0682330:three_prime_UTR 25.0%
!!! TAATGTTTTAGTGGTATGTA+AGG + chr4_4:43692723-43692742 Msa0682330:three_prime_UTR 25.0%
! AGTAATGTGAATGATGATAT+GGG + chr4_4:43692856-43692875 Msa0682330:three_prime_UTR 25.0%
! TTACAGAAGAAGAAAAACAA+GGG + chr4_4:43691089-43691108 Msa0682330:intron 25.0%
! AACAACAAAAACAACAACAA+TGG + chr4_4:43691266-43691285 Msa0682330:CDS 25.0%
! GAAAAAATGTATAGAAACAG+AGG - chr4_4:43691448-43691467 None:intergenic 25.0%
!!! TTCTCATCAGATTTTTTGTT+TGG - chr4_4:43691741-43691760 None:intergenic 25.0%
! GAAAAATGAAGACAAAAAAG+AGG + chr4_4:43691761-43691780 Msa0682330:CDS 25.0%
!! AAGGATGTATTGATAAGATT+GGG + chr4_4:43691929-43691948 Msa0682330:CDS 25.0%
!!! AATGAAAGTTGATAAAGAGA+AGG + chr4_4:43692116-43692135 Msa0682330:CDS 25.0%
!!! AGTTAAGATAATGGAGTATA+TGG + chr4_4:43692350-43692369 Msa0682330:CDS 25.0%
! TATGGAAATGTAAATGTTGA+AGG + chr4_4:43692396-43692415 Msa0682330:CDS 25.0%
! ATGGAAATGTAAATGTTGAA+GGG + chr4_4:43692397-43692416 Msa0682330:CDS 25.0%
! TTTCATTCAATTCAACTTGA+TGG + chr4_4:43692559-43692578 Msa0682330:three_prime_UTR 25.0%
!!! TAATGTTTTAGTGGTATGTA+AGG + chr4_4:43692723-43692742 Msa0682330:three_prime_UTR 25.0%
! AGTAATGTGAATGATGATAT+GGG + chr4_4:43692856-43692875 Msa0682330:three_prime_UTR 25.0%
! TTTGGAATTGGAATTGGAAT+TGG - chr4_4:43690897-43690916 None:intergenic 30.0%
! AGAAAAGTGTGATTTGGAAT+TGG - chr4_4:43690909-43690928 None:intergenic 30.0%
! AGAAGAAGAAAAGTGTGATT+TGG - chr4_4:43690915-43690934 None:intergenic 30.0%
GTTACAGAAGAAGAAAAACA+AGG + chr4_4:43691088-43691107 Msa0682330:intron 30.0%
AACAACAACAACAACAACAA+TGG + chr4_4:43691137-43691156 Msa0682330:CDS 30.0%
AACAACAACAACAACAATGA+AGG + chr4_4:43691188-43691207 Msa0682330:CDS 30.0%
ACAACAACAACAACAATGAA+GGG + chr4_4:43691189-43691208 Msa0682330:CDS 30.0%
AACAAAAACAACAACAATGG+AGG + chr4_4:43691269-43691288 Msa0682330:CDS 30.0%
AAAGTTTATATGCATTGCGA+AGG + chr4_4:43691362-43691381 Msa0682330:CDS 30.0%
!!! TCTATACATTTTTTCCGATC+TGG + chr4_4:43691453-43691472 Msa0682330:intron 30.0%
!!! CTATACATTTTTTCCGATCT+GGG + chr4_4:43691454-43691473 Msa0682330:intron 30.0%
!! TTCTTGTTGTTATCCTTCTT+GGG - chr4_4:43691708-43691727 None:intergenic 30.0%
!!! TACCACTTCTGTTTTGAAAT+TGG + chr4_4:43691894-43691913 Msa0682330:CDS 30.0%
TACCAATTTCAAAACAGAAG+TGG - chr4_4:43691899-43691918 None:intergenic 30.0%
! CAAGGATGTATTGATAAGAT+TGG + chr4_4:43691928-43691947 Msa0682330:CDS 30.0%
!! CATATGATTTTGATGTGTGT+AGG + chr4_4:43692084-43692103 Msa0682330:intron 30.0%
ATTTATCACAGAAGCTTAAG+AGG + chr4_4:43692187-43692206 Msa0682330:CDS 30.0%
TTCTCATCACTAAACATTTG+TGG - chr4_4:43692480-43692499 None:intergenic 30.0%
!! TGATGAATGATGGATGATAA+TGG + chr4_4:43692592-43692611 Msa0682330:three_prime_UTR 30.0%
! TTTTAGTGGTATGTAAGGAA+GGG + chr4_4:43692728-43692747 Msa0682330:three_prime_UTR 30.0%
ACAGTAGACATCATATCATA+TGG + chr4_4:43692774-43692793 Msa0682330:three_prime_UTR 30.0%
GAGTAATGTGAATGATGATA+TGG + chr4_4:43692855-43692874 Msa0682330:three_prime_UTR 30.0%
! TTTGGAATTGGAATTGGAAT+TGG - chr4_4:43690897-43690916 None:intergenic 30.0%
! AGAAAAGTGTGATTTGGAAT+TGG - chr4_4:43690909-43690928 None:intergenic 30.0%
! AGAAGAAGAAAAGTGTGATT+TGG - chr4_4:43690915-43690934 None:intergenic 30.0%
GTTACAGAAGAAGAAAAACA+AGG + chr4_4:43691088-43691107 Msa0682330:intron 30.0%
AACAACAACAACAACAACAA+TGG + chr4_4:43691137-43691156 Msa0682330:CDS 30.0%
AACAACAACAACAACAATGA+AGG + chr4_4:43691188-43691207 Msa0682330:CDS 30.0%
ACAACAACAACAACAATGAA+GGG + chr4_4:43691189-43691208 Msa0682330:CDS 30.0%
AACAAAAACAACAACAATGG+AGG + chr4_4:43691269-43691288 Msa0682330:CDS 30.0%
AAAGTTTATATGCATTGCGA+AGG + chr4_4:43691362-43691381 Msa0682330:CDS 30.0%
!!! TCTATACATTTTTTCCGATC+TGG + chr4_4:43691453-43691472 Msa0682330:intron 30.0%
!!! CTATACATTTTTTCCGATCT+GGG + chr4_4:43691454-43691473 Msa0682330:intron 30.0%
!! TTCTTGTTGTTATCCTTCTT+GGG - chr4_4:43691708-43691727 None:intergenic 30.0%
!!! TACCACTTCTGTTTTGAAAT+TGG + chr4_4:43691894-43691913 Msa0682330:CDS 30.0%
TACCAATTTCAAAACAGAAG+TGG - chr4_4:43691899-43691918 None:intergenic 30.0%
! CAAGGATGTATTGATAAGAT+TGG + chr4_4:43691928-43691947 Msa0682330:CDS 30.0%
!! CATATGATTTTGATGTGTGT+AGG + chr4_4:43692084-43692103 Msa0682330:intron 30.0%
ATTTATCACAGAAGCTTAAG+AGG + chr4_4:43692187-43692206 Msa0682330:CDS 30.0%
TTCTCATCACTAAACATTTG+TGG - chr4_4:43692480-43692499 None:intergenic 30.0%
!! TGATGAATGATGGATGATAA+TGG + chr4_4:43692592-43692611 Msa0682330:three_prime_UTR 30.0%
! TTTTAGTGGTATGTAAGGAA+GGG + chr4_4:43692728-43692747 Msa0682330:three_prime_UTR 30.0%
ACAGTAGACATCATATCATA+TGG + chr4_4:43692774-43692793 Msa0682330:three_prime_UTR 30.0%
GAGTAATGTGAATGATGATA+TGG + chr4_4:43692855-43692874 Msa0682330:three_prime_UTR 30.0%
! GTGTGATTTGGAATTGGAAT+TGG - chr4_4:43690903-43690922 None:intergenic 35.0%
TTATTACCGCCATTGTTGAA+AGG - chr4_4:43690958-43690977 None:intergenic 35.0%
AAGAAAAACAAGGGTGGAAA+TGG + chr4_4:43691098-43691117 Msa0682330:CDS 35.0%
AACAACAACAACAACCACAA+TGG + chr4_4:43691224-43691243 Msa0682330:CDS 35.0%
AAGAAGGAAGAGAACAACAA+AGG + chr4_4:43691317-43691336 Msa0682330:CDS 35.0%
! TTTGATGCTGTTAAGGTGTT+TGG - chr4_4:43691405-43691424 None:intergenic 35.0%
AAACACCTTAACAGCATCAA+AGG + chr4_4:43691404-43691423 Msa0682330:CDS 35.0%
TGAAACCTTTGATGCTGTTA+AGG - chr4_4:43691412-43691431 None:intergenic 35.0%
ACATTGATGAAAACCCAGAT+CGG - chr4_4:43691470-43691489 None:intergenic 35.0%
!! AGATTGTCTCTCAGTTTTGT+GGG - chr4_4:43691642-43691661 None:intergenic 35.0%
! AAGATTGTCTCTCAGTTTTG+TGG - chr4_4:43691643-43691662 None:intergenic 35.0%
!! CTTCTTGTTGTTATCCTTCT+TGG - chr4_4:43691709-43691728 None:intergenic 35.0%
CAAGAAGGATAACAACAAGA+AGG + chr4_4:43691707-43691726 Msa0682330:CDS 35.0%
AAATTGGTACTACACTGTCA+AGG + chr4_4:43691910-43691929 Msa0682330:CDS 35.0%
AGTTCAACCAAAGAAAGACA+AGG + chr4_4:43692221-43692240 Msa0682330:CDS 35.0%
GATGGTAATAACAATGAAGC+AGG + chr4_4:43692321-43692340 Msa0682330:CDS 35.0%
AGGAGGAGAAGTTAAGATAA+TGG + chr4_4:43692341-43692360 Msa0682330:CDS 35.0%
TATATGGTTCAACAACCCTT+TGG + chr4_4:43692366-43692385 Msa0682330:CDS 35.0%
!!! TTCAACAACCCTTTGGTTTT+GGG + chr4_4:43692373-43692392 Msa0682330:CDS 35.0%
TTTCCATACCCAAAACCAAA+GGG - chr4_4:43692384-43692403 None:intergenic 35.0%
ATTTCCATACCCAAAACCAA+AGG - chr4_4:43692385-43692404 None:intergenic 35.0%
TCATCACTAAACATTTGTGG+TGG - chr4_4:43692477-43692496 None:intergenic 35.0%
!! TTCAACTTGATGGTGATGAA+TGG + chr4_4:43692569-43692588 Msa0682330:three_prime_UTR 35.0%
! TGATGAATGGTGATGAATGA+TGG + chr4_4:43692582-43692601 Msa0682330:three_prime_UTR 35.0%
! GATAATGGTGATGATGATGA+TGG + chr4_4:43692607-43692626 Msa0682330:three_prime_UTR 35.0%
!!! TTTTGTTGATTCCATGAGAC+AGG + chr4_4:43692632-43692651 Msa0682330:three_prime_UTR 35.0%
!! TTTGTTGATTCCATGAGACA+GGG + chr4_4:43692633-43692652 Msa0682330:three_prime_UTR 35.0%
!! GTTTTAGTGGTATGTAAGGA+AGG + chr4_4:43692727-43692746 Msa0682330:three_prime_UTR 35.0%
! GTGTGATTTGGAATTGGAAT+TGG - chr4_4:43690903-43690922 None:intergenic 35.0%
TTATTACCGCCATTGTTGAA+AGG - chr4_4:43690958-43690977 None:intergenic 35.0%
AAGAAAAACAAGGGTGGAAA+TGG + chr4_4:43691098-43691117 Msa0682330:CDS 35.0%
AACAACAACAACAACCACAA+TGG + chr4_4:43691224-43691243 Msa0682330:CDS 35.0%
AAGAAGGAAGAGAACAACAA+AGG + chr4_4:43691317-43691336 Msa0682330:CDS 35.0%
! TTTGATGCTGTTAAGGTGTT+TGG - chr4_4:43691405-43691424 None:intergenic 35.0%
AAACACCTTAACAGCATCAA+AGG + chr4_4:43691404-43691423 Msa0682330:CDS 35.0%
TGAAACCTTTGATGCTGTTA+AGG - chr4_4:43691412-43691431 None:intergenic 35.0%
ACATTGATGAAAACCCAGAT+CGG - chr4_4:43691470-43691489 None:intergenic 35.0%
!! AGATTGTCTCTCAGTTTTGT+GGG - chr4_4:43691642-43691661 None:intergenic 35.0%
! AAGATTGTCTCTCAGTTTTG+TGG - chr4_4:43691643-43691662 None:intergenic 35.0%
!! CTTCTTGTTGTTATCCTTCT+TGG - chr4_4:43691709-43691728 None:intergenic 35.0%
CAAGAAGGATAACAACAAGA+AGG + chr4_4:43691707-43691726 Msa0682330:CDS 35.0%
AAATTGGTACTACACTGTCA+AGG + chr4_4:43691910-43691929 Msa0682330:CDS 35.0%
AGTTCAACCAAAGAAAGACA+AGG + chr4_4:43692221-43692240 Msa0682330:CDS 35.0%
GATGGTAATAACAATGAAGC+AGG + chr4_4:43692321-43692340 Msa0682330:CDS 35.0%
AGGAGGAGAAGTTAAGATAA+TGG + chr4_4:43692341-43692360 Msa0682330:CDS 35.0%
TATATGGTTCAACAACCCTT+TGG + chr4_4:43692366-43692385 Msa0682330:CDS 35.0%
!!! TTCAACAACCCTTTGGTTTT+GGG + chr4_4:43692373-43692392 Msa0682330:CDS 35.0%
TTTCCATACCCAAAACCAAA+GGG - chr4_4:43692384-43692403 None:intergenic 35.0%
ATTTCCATACCCAAAACCAA+AGG - chr4_4:43692385-43692404 None:intergenic 35.0%
TCATCACTAAACATTTGTGG+TGG - chr4_4:43692477-43692496 None:intergenic 35.0%
!! TTCAACTTGATGGTGATGAA+TGG + chr4_4:43692569-43692588 Msa0682330:three_prime_UTR 35.0%
! TGATGAATGGTGATGAATGA+TGG + chr4_4:43692582-43692601 Msa0682330:three_prime_UTR 35.0%
! GATAATGGTGATGATGATGA+TGG + chr4_4:43692607-43692626 Msa0682330:three_prime_UTR 35.0%
!!! TTTTGTTGATTCCATGAGAC+AGG + chr4_4:43692632-43692651 Msa0682330:three_prime_UTR 35.0%
!! TTTGTTGATTCCATGAGACA+GGG + chr4_4:43692633-43692652 Msa0682330:three_prime_UTR 35.0%
!! GTTTTAGTGGTATGTAAGGA+AGG + chr4_4:43692727-43692746 Msa0682330:three_prime_UTR 35.0%
!! TGTTGAAAGGTGTTGAAGGA+AGG - chr4_4:43690945-43690964 None:intergenic 40.0%
!! CCATTGTTGAAAGGTGTTGA+AGG - chr4_4:43690949-43690968 None:intergenic 40.0%
CCTTCAACACCTTTCAACAA+TGG + chr4_4:43690946-43690965 Msa0682330:exon 40.0%
TCAACACCTTTCAACAATGG+CGG + chr4_4:43690949-43690968 Msa0682330:exon 40.0%
CAGAAGAAGAAAAACAAGGG+TGG + chr4_4:43691092-43691111 Msa0682330:intron 40.0%
AAAAACAAGGGTGGAAATGG+TGG + chr4_4:43691101-43691120 Msa0682330:CDS 40.0%
CAACAACAATGAAGGGAACA+AGG + chr4_4:43691196-43691215 Msa0682330:CDS 40.0%
AACAACAACAACCACAATGG+AGG + chr4_4:43691227-43691246 Msa0682330:CDS 40.0%
CAACAATGGAGGAGATAAGA+AGG + chr4_4:43691301-43691320 Msa0682330:CDS 40.0%
CAAAGGCAAAAACAACGCTA+CGG + chr4_4:43691334-43691353 Msa0682330:CDS 40.0%
!! GATTGTCTCTCAGTTTTGTG+GGG - chr4_4:43691641-43691660 None:intergenic 40.0%
TTGTTATCCTTCTTGGGAAG+TGG - chr4_4:43691702-43691721 None:intergenic 40.0%
AAGGACAATGTGACTGTGAA+GGG + chr4_4:43692135-43692154 Msa0682330:CDS 40.0%
ATCACAGAAGCTTAAGAGGA+AGG + chr4_4:43692191-43692210 Msa0682330:CDS 40.0%
CAACCAAAGAAAGACAAGGA+AGG + chr4_4:43692225-43692244 Msa0682330:CDS 40.0%
GGAGGTAAGAAGAAGAACAA+GGG + chr4_4:43692291-43692310 Msa0682330:CDS 40.0%
GAGGTAAGAAGAAGAACAAG+GGG + chr4_4:43692292-43692311 Msa0682330:CDS 40.0%
AGGTAAGAAGAAGAACAAGG+GGG + chr4_4:43692293-43692312 Msa0682330:CDS 40.0%
GGTAATAACAATGAAGCAGG+AGG + chr4_4:43692324-43692343 Msa0682330:CDS 40.0%
!! GTTCAACAACCCTTTGGTTT+TGG + chr4_4:43692372-43692391 Msa0682330:CDS 40.0%
CACATGACAATGCAAGCATT+AGG - chr4_4:43692504-43692523 None:intergenic 40.0%
ATTCCATGAGACAGGGAAAA+AGG + chr4_4:43692640-43692659 Msa0682330:three_prime_UTR 40.0%
TTCCATGAGACAGGGAAAAA+GGG + chr4_4:43692641-43692660 Msa0682330:three_prime_UTR 40.0%
!! TGTTGAAAGGTGTTGAAGGA+AGG - chr4_4:43690945-43690964 None:intergenic 40.0%
!! CCATTGTTGAAAGGTGTTGA+AGG - chr4_4:43690949-43690968 None:intergenic 40.0%
CCTTCAACACCTTTCAACAA+TGG + chr4_4:43690946-43690965 Msa0682330:exon 40.0%
TCAACACCTTTCAACAATGG+CGG + chr4_4:43690949-43690968 Msa0682330:exon 40.0%
CAGAAGAAGAAAAACAAGGG+TGG + chr4_4:43691092-43691111 Msa0682330:intron 40.0%
AAAAACAAGGGTGGAAATGG+TGG + chr4_4:43691101-43691120 Msa0682330:CDS 40.0%
CAACAACAATGAAGGGAACA+AGG + chr4_4:43691196-43691215 Msa0682330:CDS 40.0%
AACAACAACAACCACAATGG+AGG + chr4_4:43691227-43691246 Msa0682330:CDS 40.0%
CAACAATGGAGGAGATAAGA+AGG + chr4_4:43691301-43691320 Msa0682330:CDS 40.0%
CAAAGGCAAAAACAACGCTA+CGG + chr4_4:43691334-43691353 Msa0682330:CDS 40.0%
!! GATTGTCTCTCAGTTTTGTG+GGG - chr4_4:43691641-43691660 None:intergenic 40.0%
TTGTTATCCTTCTTGGGAAG+TGG - chr4_4:43691702-43691721 None:intergenic 40.0%
AAGGACAATGTGACTGTGAA+GGG + chr4_4:43692135-43692154 Msa0682330:CDS 40.0%
ATCACAGAAGCTTAAGAGGA+AGG + chr4_4:43692191-43692210 Msa0682330:CDS 40.0%
CAACCAAAGAAAGACAAGGA+AGG + chr4_4:43692225-43692244 Msa0682330:CDS 40.0%
GGAGGTAAGAAGAAGAACAA+GGG + chr4_4:43692291-43692310 Msa0682330:CDS 40.0%
GAGGTAAGAAGAAGAACAAG+GGG + chr4_4:43692292-43692311 Msa0682330:CDS 40.0%
AGGTAAGAAGAAGAACAAGG+GGG + chr4_4:43692293-43692312 Msa0682330:CDS 40.0%
GGTAATAACAATGAAGCAGG+AGG + chr4_4:43692324-43692343 Msa0682330:CDS 40.0%
!! GTTCAACAACCCTTTGGTTT+TGG + chr4_4:43692372-43692391 Msa0682330:CDS 40.0%
CACATGACAATGCAAGCATT+AGG - chr4_4:43692504-43692523 None:intergenic 40.0%
ATTCCATGAGACAGGGAAAA+AGG + chr4_4:43692640-43692659 Msa0682330:three_prime_UTR 40.0%
TTCCATGAGACAGGGAAAAA+GGG + chr4_4:43692641-43692660 Msa0682330:three_prime_UTR 40.0%
! AGAGTGATAGTGAGTGAGTG+TGG - chr4_4:43690983-43691002 None:intergenic 45.0%
CTTTCTTCTCTCCTCCATTG+TGG - chr4_4:43691241-43691260 None:intergenic 45.0%
GGAGGAGAGAAGAACAACAA+TGG + chr4_4:43691287-43691306 Msa0682330:CDS 45.0%
GGAGAGAAGAACAACAATGG+AGG + chr4_4:43691290-43691309 Msa0682330:CDS 45.0%
GTGAAAGCAGAGAGTGAAAC+CGG + chr4_4:43691588-43691607 Msa0682330:CDS 45.0%
! TTTTGTGGGGTCCACATTTC+CGG - chr4_4:43691628-43691647 None:intergenic 45.0%
CATTTCACCACTTCCCAAGA+AGG + chr4_4:43691692-43691711 Msa0682330:CDS 45.0%
GAAGGACAATGTGACTGTGA+AGG + chr4_4:43692134-43692153 Msa0682330:CDS 45.0%
! TGTGACTGTGAAGGGTACAA+TGG + chr4_4:43692143-43692162 Msa0682330:CDS 45.0%
GAAGCTTAAGAGGAAGGTTG+AGG + chr4_4:43692197-43692216 Msa0682330:CDS 45.0%
CCACCTTCCTTGTCTTTCTT+TGG - chr4_4:43692231-43692250 None:intergenic 45.0%
CCAAAGAAAGACAAGGAAGG+TGG + chr4_4:43692228-43692247 Msa0682330:CDS 45.0%
AAGAAAGACAAGGAAGGTGG+TGG + chr4_4:43692231-43692250 Msa0682330:CDS 45.0%
GGTGAGAAGGATGGAAATGA+AGG + chr4_4:43692258-43692277 Msa0682330:CDS 45.0%
GAGAAGGATGGAAATGAAGG+AGG + chr4_4:43692261-43692280 Msa0682330:CDS 45.0%
AAGGATGGAAATGAAGGAGG+AGG + chr4_4:43692264-43692283 Msa0682330:CDS 45.0%
ATGGAAATGAAGGAGGAGGT+GGG + chr4_4:43692268-43692287 Msa0682330:CDS 45.0%
GGGAGGTAAGAAGAAGAACA+AGG + chr4_4:43692290-43692309 Msa0682330:CDS 45.0%
GGTAAGAAGAAGAACAAGGG+GGG + chr4_4:43692294-43692313 Msa0682330:CDS 45.0%
!!! CAACCCTTTGGTTTTGGGTA+TGG + chr4_4:43692378-43692397 Msa0682330:CDS 45.0%
TCCATGAGACAGGGAAAAAG+GGG + chr4_4:43692642-43692661 Msa0682330:three_prime_UTR 45.0%
! AGAGTGATAGTGAGTGAGTG+TGG - chr4_4:43690983-43691002 None:intergenic 45.0%
CTTTCTTCTCTCCTCCATTG+TGG - chr4_4:43691241-43691260 None:intergenic 45.0%
GGAGGAGAGAAGAACAACAA+TGG + chr4_4:43691287-43691306 Msa0682330:CDS 45.0%
GGAGAGAAGAACAACAATGG+AGG + chr4_4:43691290-43691309 Msa0682330:CDS 45.0%
GTGAAAGCAGAGAGTGAAAC+CGG + chr4_4:43691588-43691607 Msa0682330:CDS 45.0%
! TTTTGTGGGGTCCACATTTC+CGG - chr4_4:43691628-43691647 None:intergenic 45.0%
CATTTCACCACTTCCCAAGA+AGG + chr4_4:43691692-43691711 Msa0682330:CDS 45.0%
GAAGGACAATGTGACTGTGA+AGG + chr4_4:43692134-43692153 Msa0682330:CDS 45.0%
! TGTGACTGTGAAGGGTACAA+TGG + chr4_4:43692143-43692162 Msa0682330:CDS 45.0%
GAAGCTTAAGAGGAAGGTTG+AGG + chr4_4:43692197-43692216 Msa0682330:CDS 45.0%
CCACCTTCCTTGTCTTTCTT+TGG - chr4_4:43692231-43692250 None:intergenic 45.0%
CCAAAGAAAGACAAGGAAGG+TGG + chr4_4:43692228-43692247 Msa0682330:CDS 45.0%
AAGAAAGACAAGGAAGGTGG+TGG + chr4_4:43692231-43692250 Msa0682330:CDS 45.0%
GGTGAGAAGGATGGAAATGA+AGG + chr4_4:43692258-43692277 Msa0682330:CDS 45.0%
GAGAAGGATGGAAATGAAGG+AGG + chr4_4:43692261-43692280 Msa0682330:CDS 45.0%
AAGGATGGAAATGAAGGAGG+AGG + chr4_4:43692264-43692283 Msa0682330:CDS 45.0%
ATGGAAATGAAGGAGGAGGT+GGG + chr4_4:43692268-43692287 Msa0682330:CDS 45.0%
GGGAGGTAAGAAGAAGAACA+AGG + chr4_4:43692290-43692309 Msa0682330:CDS 45.0%
GGTAAGAAGAAGAACAAGGG+GGG + chr4_4:43692294-43692313 Msa0682330:CDS 45.0%
!!! CAACCCTTTGGTTTTGGGTA+TGG + chr4_4:43692378-43692397 Msa0682330:CDS 45.0%
TCCATGAGACAGGGAAAAAG+GGG + chr4_4:43692642-43692661 Msa0682330:three_prime_UTR 45.0%
ACCGGAAAAGTAACCGTCAC+CGG + chr4_4:43691606-43691625 Msa0682330:CDS 50.0%
!!! TCCGGTGACGGTTACTTTTC+CGG - chr4_4:43691610-43691629 None:intergenic 50.0%
AGTAACCGTCACCGGAAATG+TGG + chr4_4:43691614-43691633 Msa0682330:CDS 50.0%
! AAAGACAAGGAAGGTGGTGG+TGG + chr4_4:43692234-43692253 Msa0682330:CDS 50.0%
GATGGAAATGAAGGAGGAGG+TGG + chr4_4:43692267-43692286 Msa0682330:CDS 50.0%
TGGAAATGAAGGAGGAGGTG+GGG + chr4_4:43692269-43692288 Msa0682330:CDS 50.0%
AAGAAGAAGAACAAGGGGGG+TGG + chr4_4:43692297-43692316 Msa0682330:CDS 50.0%
! ACCCCTTTTTCCCTGTCTCA+TGG - chr4_4:43692646-43692665 None:intergenic 50.0%
ACCGGAAAAGTAACCGTCAC+CGG + chr4_4:43691606-43691625 Msa0682330:CDS 50.0%
!!! TCCGGTGACGGTTACTTTTC+CGG - chr4_4:43691610-43691629 None:intergenic 50.0%
AGTAACCGTCACCGGAAATG+TGG + chr4_4:43691614-43691633 Msa0682330:CDS 50.0%
! AAAGACAAGGAAGGTGGTGG+TGG + chr4_4:43692234-43692253 Msa0682330:CDS 50.0%
GATGGAAATGAAGGAGGAGG+TGG + chr4_4:43692267-43692286 Msa0682330:CDS 50.0%
TGGAAATGAAGGAGGAGGTG+GGG + chr4_4:43692269-43692288 Msa0682330:CDS 50.0%
AAGAAGAAGAACAAGGGGGG+TGG + chr4_4:43692297-43692316 Msa0682330:CDS 50.0%
! ACCCCTTTTTCCCTGTCTCA+TGG - chr4_4:43692646-43692665 None:intergenic 50.0%
GGAAATGAAGGAGGAGGTGG+GGG + chr4_4:43692270-43692289 Msa0682330:CDS 55.0%
AAGAACAAGGGGGGTGGAGA+TGG + chr4_4:43692303-43692322 Msa0682330:CDS 55.0%
GGAAATGAAGGAGGAGGTGG+GGG + chr4_4:43692270-43692289 Msa0682330:CDS 55.0%
AAGAACAAGGGGGGTGGAGA+TGG + chr4_4:43692303-43692322 Msa0682330:CDS 55.0%
GGGGTCCACATTTCCGGTGA+CGG - chr4_4:43691622-43691641 None:intergenic 60.0%
!! GACAAGGAAGGTGGTGGTGG+TGG + chr4_4:43692237-43692256 Msa0682330:CDS 60.0%
!! AGGTGGTGGTGGTGGTGAGA+AGG + chr4_4:43692245-43692264 Msa0682330:CDS 60.0%
!! GGTGGTGGTGGTGAGAAGGA+TGG + chr4_4:43692249-43692268 Msa0682330:CDS 60.0%
AATGAAGGAGGAGGTGGGGG+AGG + chr4_4:43692273-43692292 Msa0682330:CDS 60.0%
GGGGTCCACATTTCCGGTGA+CGG - chr4_4:43691622-43691641 None:intergenic 60.0%
!! GACAAGGAAGGTGGTGGTGG+TGG + chr4_4:43692237-43692256 Msa0682330:CDS 60.0%
!! AGGTGGTGGTGGTGGTGAGA+AGG + chr4_4:43692245-43692264 Msa0682330:CDS 60.0%
!! GGTGGTGGTGGTGAGAAGGA+TGG + chr4_4:43692249-43692268 Msa0682330:CDS 60.0%
AATGAAGGAGGAGGTGGGGG+AGG + chr4_4:43692273-43692292 Msa0682330:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 43690867 43692879 43690867 ID=Msa0682330;Name=Msa0682330
chr4_4 mRNA 43690867 43692879 43690867 ID=Msa0682330-mRNA-1;Parent=Msa0682330;Name=Msa0682330-mRNA-1;_AED=0.08;_eAED=0.08;_QI=98|1|1|1|1|1|5|355|348
chr4_4 exon 43690867 43690970 43690867 ID=Msa0682330-mRNA-1:exon:10604;Parent=Msa0682330-mRNA-1
chr4_4 exon 43691095 43691425 43691095 ID=Msa0682330-mRNA-1:exon:10605;Parent=Msa0682330-mRNA-1
chr4_4 exon 43691577 43691782 43691577 ID=Msa0682330-mRNA-1:exon:10606;Parent=Msa0682330-mRNA-1
chr4_4 exon 43691889 43691973 43691889 ID=Msa0682330-mRNA-1:exon:10607;Parent=Msa0682330-mRNA-1
chr4_4 exon 43692106 43692879 43692106 ID=Msa0682330-mRNA-1:exon:10608;Parent=Msa0682330-mRNA-1
chr4_4 five_prime_UTR 43690867 43690964 43690867 ID=Msa0682330-mRNA-1:five_prime_utr;Parent=Msa0682330-mRNA-1
chr4_4 CDS 43690965 43690970 43690965 ID=Msa0682330-mRNA-1:cds;Parent=Msa0682330-mRNA-1
chr4_4 CDS 43691095 43691425 43691095 ID=Msa0682330-mRNA-1:cds;Parent=Msa0682330-mRNA-1
chr4_4 CDS 43691577 43691782 43691577 ID=Msa0682330-mRNA-1:cds;Parent=Msa0682330-mRNA-1
chr4_4 CDS 43691889 43691973 43691889 ID=Msa0682330-mRNA-1:cds;Parent=Msa0682330-mRNA-1
chr4_4 CDS 43692106 43692524 43692106 ID=Msa0682330-mRNA-1:cds;Parent=Msa0682330-mRNA-1
chr4_4 three_prime_UTR 43692525 43692879 43692525 ID=Msa0682330-mRNA-1:three_prime_utr;Parent=Msa0682330-mRNA-1
Gene Sequence

>Msa0682330

ATGGCGAAGAAGAAAAACAAGGGTGGAAATGGTGGAAATAATGCTGAAAACAACAACAACAACAACAACAATGGTGAAAACAAAGAAGAAAACAACAATAACAACAACAACAACAATGAAGGGAACAAGGAAGAAAACAACAACAACAACCACAATGGAGGAGAGAAGAAAGAAGAAAACAACAAAAACAACAACAATGGAGGAGAGAAGAACAACAATGGAGGAGATAAGAAGGAAGAGAACAACAAAGGCAAAAACAACGCTACGGTTTTGAAAGTTTATATGCATTGCGAAGGTTGCGCTAACAAAGTCACCAAACACCTTAACAGCATCAAAGGTGTTGATACTGTGAAAGCAGAGAGTGAAACCGGAAAAGTAACCGTCACCGGAAATGTGGACCCCACAAAACTGAGAGACAATCTTGCTGAGAAGATAAAGAAGAAAGTTGAACTCATTTCACCACTTCCCAAGAAGGATAACAACAAGAAGGAAAATGAACCAAACAAAAAATCTGATGAGAAGAAAAATGAAGACAAAAAAGAGTCAATTACCACTTCTGTTTTGAAATTGGTACTACACTGTCAAGGATGTATTGATAAGATTGGGAAAATTGTTATGAAAACTAAAGGAGTGCTTGAAATGAAAGTTGATAAAGAGAAGGACAATGTGACTGTGAAGGGTACAATGGATGTGAAAAAGCTAGTTGAGAATTTATCACAGAAGCTTAAGAGGAAGGTTGAGGTAGTTCAACCAAAGAAAGACAAGGAAGGTGGTGGTGGTGGTGAGAAGGATGGAAATGAAGGAGGAGGTGGGGGAGGTAAGAAGAAGAACAAGGGGGGTGGAGATGGTAATAACAATGAAGCAGGAGGAGAAGTTAAGATAATGGAGTATATGGTTCAACAACCCTTTGGTTTTGGGTATGGAAATGTAAATGTTGAAGGGTATAATGCTGCACAAGTTTACCAAGAGATGTTAAATATTCATATGCAAACACAACCACCACAAATGTTTAGTGATGAGAATCCTAATGCTTGCATTGTCATGTGA

Protein sequence

>Msa0682330

MAKKKNKGGNGGNNAENNNNNNNNGENKEENNNNNNNNNEGNKEENNNNNHNGGEKKEENNKNNNNGGEKNNNGGDKKEENNKGKNNATVLKVYMHCEGCANKVTKHLNSIKGVDTVKAESETGKVTVTGNVDPTKLRDNLAEKIKKKVELISPLPKKDNNKKENEPNKKSDEKKNEDKKESITTSVLKLVLHCQGCIDKIGKIVMKTKGVLEMKVDKEKDNVTVKGTMDVKKLVENLSQKLKRKVEVVQPKKDKEGGGGGEKDGNEGGGGGGKKKNKGGGDGNNNEAGGEVKIMEYMVQQPFGFGYGNVNVEGYNAAQVYQEMLNIHMQTQPPQMFSDENPNACIVM*