AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0737570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0737570 MtrunA17_Chr5g0435301 95.807 1121 30 1 1 1121 1 1104 0.0 2229
Msa0737570 MtrunA17_Chr3g0111661 64.409 635 209 5 489 1121 5 624 0.0 809
Msa0737570 MtrunA17_Chr3g0111661 60.194 103 40 1 246 348 2 103 1.63e-30 129
Msa0737570 MtrunA17_Chr3g0111661 48.322 149 62 5 117 256 1 143 5.85e-29 124
Msa0737570 MtrunA17_Chr3g0111661 58.095 105 41 2 367 471 2 103 4.92e-28 121
Msa0737570 MtrunA17_Chr3g0111661 48.120 133 62 4 1 132 1 127 4.80e-25 112
Msa0737570 MtrunA17_Chr4g0074301 41.026 624 331 12 504 1120 19 612 1.47e-137 431
Msa0737570 MtrunA17_Chr4g0074301 41.837 98 51 3 131 223 19 115 2.98e-15 80.9
Msa0737570 MtrunA17_Chr4g0074301 37.008 127 68 4 20 135 19 144 5.93e-15 79.7
Msa0737570 MtrunA17_Chr4g0074301 40.698 86 46 2 264 345 19 103 5.00e-14 76.6
Msa0737570 MtrunA17_Chr4g0001231 41.680 619 324 12 507 1120 22 608 4.39e-137 430
Msa0737570 MtrunA17_Chr4g0001231 44.048 84 41 3 136 214 24 106 1.43e-13 75.1
Msa0737570 MtrunA17_Chr4g0001231 40.187 107 53 4 25 121 24 129 1.48e-13 75.1
Msa0737570 MtrunA17_Chr4g0001231 41.860 86 45 2 267 348 22 106 2.09e-13 74.7
Msa0737570 MtrunA17_Chr4g0001231 43.421 76 40 2 388 463 22 94 1.56e-11 68.6
Msa0737570 MtrunA17_Chr4g0070931 41.026 624 331 11 504 1120 19 612 1.17e-136 429
Msa0737570 MtrunA17_Chr4g0070931 35.433 127 70 3 20 135 19 144 1.23e-14 78.6
Msa0737570 MtrunA17_Chr4g0070931 40.816 98 52 3 131 223 19 115 1.27e-14 78.6
Msa0737570 MtrunA17_Chr4g0070931 39.130 92 49 3 264 351 19 107 3.64e-13 73.9
Msa0737570 MtrunA17_Chr2g0328241 37.557 655 344 19 518 1127 32 666 1.92e-110 360
Msa0737570 MtrunA17_Chr2g0328251 36.637 666 351 19 518 1127 32 682 5.06e-110 360
Msa0737570 MtrunA17_Chr4g0024031 33.982 668 342 17 518 1127 32 658 1.03e-97 326
Msa0737570 MtrunA17_Chr2g0327251 35.091 550 282 11 597 1127 63 556 5.05e-87 293
Msa0737570 MtrunA17_Chr3g0111741 58.911 202 80 2 922 1121 123 323 1.41e-63 220
Msa0737570 MtrunA17_Chr4g0071151 46.269 268 111 5 895 1142 3 257 1.57e-63 216
Msa0737570 MtrunA17_Chr2g0328231 40.294 340 151 9 805 1127 50 354 9.79e-58 204
Msa0737570 MtrunA17_Chr3g0111731 51.185 211 88 4 914 1121 1 199 1.10e-49 176
Msa0737570 MtrunA17_Chr4g0074271 32.658 395 215 8 504 895 36 382 1.92e-45 171
Msa0737570 MtrunA17_Chr4g0074271 40.816 98 52 3 131 223 36 132 2.43e-14 77.0
Msa0737570 MtrunA17_Chr4g0074271 58.621 58 24 0 1063 1120 384 441 7.30e-14 75.5
Msa0737570 MtrunA17_Chr4g0074271 36.000 125 65 5 20 133 36 156 1.25e-13 74.7
Msa0737570 MtrunA17_Chr4g0074271 39.535 86 47 2 264 345 36 120 3.17e-13 73.6
Msa0737570 MtrunA17_Chr3g0111691 62.712 59 22 0 1063 1121 17 75 1.88e-17 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0737570 AT3G48670.2 50.965 622 285 7 504 1121 24 629 0.0 611
Msa0737570 AT3G48670.2 51.042 96 47 0 264 359 24 119 2.43e-23 107
Msa0737570 AT3G48670.2 40.458 131 67 4 131 256 24 148 4.59e-19 93.6
Msa0737570 AT3G48670.2 56.962 79 31 2 25 102 29 105 7.28e-18 89.7
Msa0737570 AT3G48670.2 50.000 86 41 1 388 473 27 110 1.31e-16 85.5
Msa0737570 AT3G48670.1 50.965 622 285 7 504 1121 24 629 0.0 611
Msa0737570 AT3G48670.1 51.042 96 47 0 264 359 24 119 2.43e-23 107
Msa0737570 AT3G48670.1 40.458 131 67 4 131 256 24 148 4.59e-19 93.6
Msa0737570 AT3G48670.1 56.962 79 31 2 25 102 29 105 7.28e-18 89.7
Msa0737570 AT3G48670.1 50.000 86 41 1 388 473 27 110 1.31e-16 85.5
Msa0737570 AT3G48670.3 50.965 622 285 7 504 1121 24 629 0.0 611
Msa0737570 AT3G48670.3 51.042 96 47 0 264 359 24 119 2.43e-23 107
Msa0737570 AT3G48670.3 40.458 131 67 4 131 256 24 148 4.59e-19 93.6
Msa0737570 AT3G48670.3 56.962 79 31 2 25 102 29 105 7.28e-18 89.7
Msa0737570 AT3G48670.3 50.000 86 41 1 388 473 27 110 1.31e-16 85.5
Msa0737570 AT3G12550.5 46.677 632 311 10 504 1124 8 624 0.0 555
Msa0737570 AT3G12550.5 48.718 78 40 0 268 345 12 89 3.46e-16 84.3
Msa0737570 AT3G12550.5 54.667 75 32 1 387 461 10 82 4.75e-14 77.4
Msa0737570 AT3G12550.5 36.806 144 66 6 136 260 13 150 1.40e-13 75.9
Msa0737570 AT3G12550.5 52.857 70 32 1 25 93 13 82 1.98e-13 75.1
Msa0737570 AT3G12550.4 46.445 633 312 10 504 1124 8 625 0.0 555
Msa0737570 AT3G12550.4 48.718 78 40 0 268 345 12 89 3.18e-16 84.3
Msa0737570 AT3G12550.4 54.667 75 32 1 387 461 10 82 4.37e-14 77.4
Msa0737570 AT3G12550.4 36.806 144 66 6 136 260 13 150 1.31e-13 75.9
Msa0737570 AT3G12550.4 52.857 70 32 1 25 93 13 82 1.82e-13 75.5
Msa0737570 AT3G12550.2 46.445 633 312 10 504 1124 8 625 0.0 555
Msa0737570 AT3G12550.2 48.718 78 40 0 268 345 12 89 3.18e-16 84.3
Msa0737570 AT3G12550.2 54.667 75 32 1 387 461 10 82 4.37e-14 77.4
Msa0737570 AT3G12550.2 36.806 144 66 6 136 260 13 150 1.31e-13 75.9
Msa0737570 AT3G12550.2 52.857 70 32 1 25 93 13 82 1.82e-13 75.5
Msa0737570 AT3G12550.1 46.445 633 312 10 504 1124 8 625 0.0 555
Msa0737570 AT3G12550.1 48.718 78 40 0 268 345 12 89 3.18e-16 84.3
Msa0737570 AT3G12550.1 54.667 75 32 1 387 461 10 82 4.37e-14 77.4
Msa0737570 AT3G12550.1 36.806 144 66 6 136 260 13 150 1.31e-13 75.9
Msa0737570 AT3G12550.1 52.857 70 32 1 25 93 13 82 1.82e-13 75.5
Msa0737570 AT3G12550.3 45.438 559 280 9 504 1052 8 551 6.72e-156 478
Msa0737570 AT3G12550.3 48.718 78 40 0 268 345 12 89 4.03e-16 84.0
Msa0737570 AT3G12550.3 54.667 75 32 1 387 461 10 82 4.02e-14 77.4
Msa0737570 AT3G12550.3 36.806 144 66 6 136 260 13 150 1.31e-13 75.9
Msa0737570 AT3G12550.3 52.857 70 32 1 25 93 13 82 1.52e-13 75.5
Msa0737570 AT4G00380.1 39.145 608 345 10 517 1120 32 618 1.07e-126 403
Msa0737570 AT4G00380.3 39.145 608 345 10 517 1120 32 618 1.07e-126 403
Msa0737570 AT1G15910.1 38.312 616 355 10 509 1120 23 617 3.92e-126 402
Msa0737570 AT1G80790.1 39.583 624 347 14 503 1120 18 617 1.27e-119 384
Msa0737570 AT1G80790.1 39.394 99 55 3 263 358 18 114 5.97e-14 77.0
Msa0737570 AT1G80790.1 42.424 99 51 4 131 225 19 115 1.39e-13 75.9
Msa0737570 AT1G80790.1 46.667 75 37 3 20 93 19 91 2.76e-11 68.2
Msa0737570 AT1G80790.2 39.583 624 347 14 503 1120 18 617 1.27e-119 384
Msa0737570 AT1G80790.2 39.394 99 55 3 263 358 18 114 5.97e-14 77.0
Msa0737570 AT1G80790.2 42.424 99 51 4 131 225 19 115 1.39e-13 75.9
Msa0737570 AT1G80790.2 46.667 75 37 3 20 93 19 91 2.76e-11 68.2
Msa0737570 AT4G00380.2 36.842 608 331 9 517 1120 32 590 1.29e-113 367
Msa0737570 AT5G59390.2 39.155 521 299 7 609 1121 23 533 4.38e-112 361
Msa0737570 AT5G59390.4 39.155 521 299 7 609 1121 23 533 4.38e-112 361
Msa0737570 AT5G59390.3 39.155 521 299 7 609 1121 23 533 4.38e-112 361
Msa0737570 AT1G13790.2 40.430 512 293 6 615 1121 214 718 1.38e-110 363
Msa0737570 AT1G13790.2 47.143 70 36 1 267 336 13 81 5.78e-13 73.9
Msa0737570 AT1G13790.1 40.430 512 293 6 615 1121 214 718 1.38e-110 363
Msa0737570 AT1G13790.1 47.143 70 36 1 267 336 13 81 5.78e-13 73.9
Msa0737570 AT5G59390.1 38.783 526 299 8 609 1121 23 538 7.11e-110 355
Msa0737570 AT5G59390.5 38.783 526 299 8 609 1121 23 538 7.11e-110 355
Msa0737570 AT4G01180.1 38.258 528 282 10 615 1120 27 532 6.52e-109 353
Msa0737570 AT4G01780.1 40.882 499 170 7 625 1121 79 454 4.57e-107 345
Msa0737570 AT1G80790.3 36.878 442 252 11 503 940 18 436 5.55e-77 262
Msa0737570 AT1G80790.3 39.394 99 55 3 263 358 18 114 4.48e-14 76.6
Msa0737570 AT1G80790.3 42.424 99 51 4 131 225 19 115 1.09e-13 75.5
Msa0737570 AT1G80790.3 46.667 75 37 3 20 93 19 91 2.05e-11 68.2
Msa0737570 AT3G29375.3 40.299 201 96 3 921 1120 33 210 8.19e-37 139
Msa0737570 AT3G29375.1 40.299 201 96 3 921 1120 156 333 2.52e-36 142
Msa0737570 AT3G29375.2 35.338 133 62 3 921 1052 33 142 8.04e-15 74.3

Find 257 sgRNAs with CRISPR-Local

Find 519 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGCTTTGTTGAAATATT+TGG 0.084089 5_1:+54825233 Msa0737570:CDS
TTACGTTAGTGTACAAATTT+AGG 0.092870 5_1:-54831197 None:intergenic
AGTGCATCTCAAATAAATTT+AGG 0.161480 5_1:+54826282 Msa0737570:CDS
TTTGGCTTTGGTAAAATATT+TGG 0.168256 5_1:+54824737 Msa0737570:CDS
GTGCTTATGCTTATTCATTT+AGG 0.173507 5_1:+54831141 Msa0737570:CDS
TCTAGCTTTAGTGAAATATT+TGG 0.175657 5_1:+54827267 Msa0737570:CDS
TAGGAAATACATCATATATT+TGG 0.180378 5_1:+54831050 Msa0737570:CDS
GAACTCCTTAATCATGCTTT+AGG 0.201568 5_1:+54827193 Msa0737570:CDS
AAAGCCTGCAAATAAATATT+TGG 0.216840 5_1:+54827327 Msa0737570:CDS
GCATCTTGCTCCATGATTTC+AGG 0.219322 5_1:-54827805 None:intergenic
ACAACTTGGCATCTCTTTAA+TGG 0.221793 5_1:-54829491 None:intergenic
TTTGGTCAAATATTTGAAAA+AGG 0.226402 5_1:+54826509 Msa0737570:CDS
GAAATCCTTGAACACGCTTC+TGG 0.226592 5_1:+54825895 Msa0737570:CDS
TCGTGCGGTTGAACATATTT+AGG 0.227025 5_1:+54831031 Msa0737570:CDS
TACTCCTCGGTTCAACATTA+TGG 0.232918 5_1:-54826993 None:intergenic
TGATGTACATGTTTATTAAA+TGG 0.236189 5_1:-54831231 None:intergenic
CTTTCTTCAAATGGCTGCTT+TGG 0.246195 5_1:+54828694 Msa0737570:CDS
AACATATGAACAGCTCAAAA+AGG 0.257228 5_1:+54826317 Msa0737570:CDS
CCAAGAGAAAATGCAATTAT+AGG 0.280146 5_1:+54827164 Msa0737570:CDS
TAAGGGATGAATACCGAATA+AGG 0.282234 5_1:+54827515 Msa0737570:CDS
CATACTGCCCTAATAATAAA+AGG 0.282836 5_1:+54826382 Msa0737570:CDS
AACTCCTTAATCATGCTTTA+GGG 0.296371 5_1:+54827194 Msa0737570:CDS
ATTTAGGGGCTTAAAAGTTT+AGG 0.299326 5_1:-54831181 None:intergenic
ATTAGATTGTCACGGTAAAA+AGG 0.303078 5_1:+54827663 Msa0737570:CDS
TCCGAACTCTTTGGAATTCA+TGG 0.308688 5_1:+54827557 Msa0737570:CDS
TACGTTAGTGTACAAATTTA+GGG 0.309926 5_1:-54831196 None:intergenic
TATTTATTTGCAGGCTTTAA+CGG 0.314749 5_1:-54827322 None:intergenic
TTCTTCTCGGCTTTGTATCA+TGG 0.322336 5_1:-54826220 None:intergenic
CAATCCCGGTGGCATGATTC+AGG 0.328473 5_1:-54824668 None:intergenic
CAAAGTGAAATTGAAATGTT+TGG 0.340775 5_1:+54823084 None:intergenic
GGTACATAACCTCGGAATTA+TGG 0.344195 5_1:+54830145 Msa0737570:CDS
CATTGAAAAGGCGGATCATC+TGG 0.344719 5_1:+54826485 Msa0737570:CDS
GATGCCAGTCAGGGTCCTTC+AGG 0.350160 5_1:-54829642 None:intergenic
CGAGATACCACCAACTCAAC+TGG 0.352569 5_1:-54824533 None:intergenic
GCTCTTTAATGATCAGAGTT+TGG 0.354729 5_1:-54829334 None:intergenic
CACGTAGAGTCCGAACTCTT+TGG 0.355170 5_1:+54827548 Msa0737570:CDS
CAACCATAAAAGCATGTTCT+AGG 0.355963 5_1:-54825164 None:intergenic
GTGGATTAAAACCCCTTATT+CGG 0.359990 5_1:-54827528 None:intergenic
TTGGAGATTCAGCAACTAAA+AGG 0.360226 5_1:+54829188 Msa0737570:CDS
GTGCATCTCAAATAAATTTA+GGG 0.361894 5_1:+54826283 Msa0737570:CDS
GAAATCCTTGAACATGCTTC+CGG 0.365495 5_1:+54826429 Msa0737570:CDS
TTTAATGAAATATTTGAAAC+AGG 0.366788 5_1:+54825975 Msa0737570:CDS
AAGAAGCTATGGAGTTTGTT+TGG 0.370142 5_1:-54823151 None:intergenic
AAATCCTTGAACATGCTTCC+GGG 0.383309 5_1:+54826430 Msa0737570:CDS
TTCTTCATAGCTTCTAGAAA+TGG 0.384884 5_1:-54829556 None:intergenic
TACAAAGTGGACAACATAAT+CGG 0.386803 5_1:+54827748 Msa0737570:CDS
AAATCCTTGAACACGCTTCT+GGG 0.387945 5_1:+54825896 Msa0737570:CDS
GTGATTGAAGGTGATTCTTC+TGG 0.391219 5_1:+54826030 Msa0737570:CDS
ACCCTTCTTGAGTTCTGTAT+AGG 0.392185 5_1:-54827092 None:intergenic
CTACCCCTAAAGCATGATTA+AGG 0.393007 5_1:-54827198 None:intergenic
CAGTACTTTCAATCTCTTCA+AGG 0.398329 5_1:+54823205 Msa0737570:five_prime_UTR
CATTCTCTTCACACGAATAT+CGG 0.398883 5_1:-54829515 None:intergenic
TTCTGAACTGTGTTCGTTGT+GGG 0.399874 5_1:+54829612 Msa0737570:CDS
GAAGGGTAGTCATTTGGCTT+TGG 0.407239 5_1:+54824725 Msa0737570:CDS
AACCGAGGAGTAACTGTAAC+AGG 0.408103 5_1:+54827004 Msa0737570:CDS
CAGAGAGAAGGCAACTCATC+TGG 0.411504 5_1:+54825951 Msa0737570:CDS
AATATTTCACTAAAGCTAGA+TGG 0.413692 5_1:-54827264 None:intergenic
CCGTCAAAGCCTGTTGATAA+AGG 0.414670 5_1:+54825282 Msa0737570:CDS
GAACAACAAGATAAAAGAAA+TGG 0.415980 5_1:+54827879 Msa0737570:CDS
CGACCCCAGAAGCGTGTTCA+AGG 0.420711 5_1:-54825900 None:intergenic
TCTTACGAAGAACTCAAAAC+AGG 0.423431 5_1:+54824561 Msa0737570:CDS
ACCAATACATCGTCCATCTT+CGG 0.425204 5_1:-54827476 None:intergenic
CTGAATCATGCCACCGGGAT+TGG 0.425603 5_1:+54824669 Msa0737570:CDS
TTATAATCCTGTTTCCTCTC+GGG 0.425867 5_1:-54824633 None:intergenic
TGAGTTGCGAAGAATTGAAC+TGG 0.427217 5_1:+54828270 Msa0737570:CDS
ATTCTGAAAGGCAGTTTGTA+TGG 0.427922 5_1:+54827413 Msa0737570:CDS
TGAAAGGCTTAAGTTGCAAC+TGG 0.428021 5_1:+54828228 Msa0737570:CDS
TCAGGATCACCTTTATCAAC+AGG 0.428145 5_1:-54825291 None:intergenic
TTTAAAATTTCTACAATCCA+AGG 0.428697 5_1:+54829667 Msa0737570:CDS
CTAATAATAAAAGGATAAAA+CGG 0.432980 5_1:+54826391 Msa0737570:CDS
CTTATAATCCTGTTTCCTCT+CGG 0.434843 5_1:-54824634 None:intergenic
CCTTTATCAACAGGCTTTGA+CGG 0.436764 5_1:-54825282 None:intergenic
CAGTTTGTATGGCCATGGAC+TGG 0.437249 5_1:+54827424 Msa0737570:CDS
CCATGCTCTAACAAGGATAC+TGG 0.439675 5_1:+54825727 Msa0737570:CDS
TAAAGAGAAGGGTAGTCATT+TGG 0.439933 5_1:+54824719 Msa0737570:CDS
TTTAGTGAAATATTTGGAAA+AGG 0.440221 5_1:+54827273 Msa0737570:CDS
TTTGTTGAAATATTTGGAAA+AGG 0.440273 5_1:+54825239 Msa0737570:CDS
TACATACCACCAACTTATAT+CGG 0.440647 5_1:-54825028 None:intergenic
CCTTTCTTCGTTGGTTCTGA+AGG 0.442569 5_1:-54826552 None:intergenic
ACCGAAGATGGACGATGTAT+TGG 0.444273 5_1:+54827475 Msa0737570:CDS
GAAAACAGGATTATTTGTAC+AGG 0.444980 5_1:+54825136 Msa0737570:CDS
TACATCGTCCATCTTCGGTT+TGG 0.445208 5_1:-54827471 None:intergenic
AAGGGATGAATACCGAATAA+GGG 0.445463 5_1:+54827516 Msa0737570:CDS
CTCTCTTAAATCTATATGTA+AGG 0.449418 5_1:-54829276 None:intergenic
CTTGAACATGCTTCCGGGGT+GGG 0.449618 5_1:+54826435 Msa0737570:CDS
ATACAACCTGATGTTTCCCT+TGG 0.453230 5_1:-54829684 None:intergenic
GAAACTTGCCGCAGATCAAA+AGG 0.454330 5_1:+54828745 Msa0737570:CDS
TAATGCATTGGCATTTGAAA+GGG 0.456436 5_1:+54827633 Msa0737570:CDS
CGATATTCGTGTGAAGAGAA+TGG 0.458047 5_1:+54829516 Msa0737570:CDS
CGCACAAAGGAGAAGTGTAT+TGG 0.458889 5_1:+54827231 Msa0737570:CDS
TAAAACAATACCTGAAATCA+TGG 0.459539 5_1:+54827795 Msa0737570:CDS
TAATAATAAAAGGATAAAAC+GGG 0.460262 5_1:+54826392 Msa0737570:CDS
CTTATGCTTATTCATTTAGG+TGG 0.462337 5_1:+54831144 Msa0737570:CDS
TGAGCCTAGGAGAAACTCTA+TGG 0.464621 5_1:+54824473 Msa0737570:exon
GATATTCGTGTGAAGAGAAT+GGG 0.465670 5_1:+54829517 Msa0737570:CDS
GAGATATCACCTTTCTTCGT+TGG 0.466608 5_1:-54826561 None:intergenic
TCAACAGGCTTTGACGGTCC+AGG 0.467518 5_1:-54825276 None:intergenic
TCGGTATTCATCCCTTAGCT+TGG 0.468014 5_1:-54827509 None:intergenic
CCATCTTCGGTTTGGCTAGT+GGG 0.472690 5_1:-54827463 None:intergenic
GAATTTAATAAAAGTTGGCT+AGG 0.475296 5_1:+54827604 Msa0737570:CDS
TTGTGGAATTTAATAAAAGT+TGG 0.475472 5_1:+54827599 Msa0737570:CDS
AAAGGCGGATCATCTGGCTT+TGG 0.475558 5_1:+54826491 Msa0737570:CDS
TAAAGTAGAGACATAATTTG+CGG 0.475865 5_1:+54831426 Msa0737570:three_prime_UTR
AATTTCTCACTGTTCTATCA+AGG 0.477023 5_1:+54825002 Msa0737570:CDS
TCATGGAGCAAGATGCTAGA+AGG 0.477506 5_1:+54827812 Msa0737570:CDS
CCGAACTCTTTGGAATTCAT+GGG 0.479524 5_1:+54827558 Msa0737570:CDS
CCATCAAAACCTGTGATTGA+AGG 0.482216 5_1:+54826018 Msa0737570:CDS
CCACCCCGGAAGCATGTTCA+AGG 0.482301 5_1:-54826434 None:intergenic
AGTTTGTATGGCCATGGACT+GGG 0.482657 5_1:+54827425 Msa0737570:CDS
ACAAAGTGGACAACATAATC+GGG 0.483753 5_1:+54827749 Msa0737570:CDS
ATTTCCCTGTACACATAGTC+CGG 0.484237 5_1:-54825877 None:intergenic
AAATTCCACAACTGCAGCTC+CGG 0.484281 5_1:-54827587 None:intergenic
AACATGCTTCCGGGGTGGGT+TGG 0.485541 5_1:+54826439 Msa0737570:CDS
ATATCGCAAACAGCAGGATC+AGG 0.485842 5_1:-54825309 None:intergenic
GTGAAAGTGGTTCCAAGCTA+AGG 0.486424 5_1:+54827497 Msa0737570:CDS
GTACTGCCCTAATAGAAAAC+AGG 0.487367 5_1:+54825122 Msa0737570:CDS
TGAAGTAGAGACATAATTTG+TGG 0.488702 5_1:+54831369 Msa0737570:three_prime_UTR
TCCATCTTCGGTTTGGCTAG+TGG 0.489016 5_1:-54827464 None:intergenic
AAGAGAAGTGCTAAAGAGAA+GGG 0.491974 5_1:+54824708 Msa0737570:CDS
CCCATGAATTCCAAAGAGTT+CGG 0.492366 5_1:-54827558 None:intergenic
TGAAATTGAAGAAGAAGCTA+TGG 0.496867 5_1:-54823162 None:intergenic
CCACTTTGTAGTCATCAGCT+CGG 0.497589 5_1:-54827735 None:intergenic
ATAATGCATTGGCATTTGAA+AGG 0.498302 5_1:+54827632 Msa0737570:CDS
CTTGATACTTCAAGCTTCTG+TGG 0.498905 5_1:+54831078 Msa0737570:CDS
CCCACTAGCCAAACCGAAGA+TGG 0.498943 5_1:+54827463 Msa0737570:CDS
AGAGACATAATTTGTGGTGG+TGG 0.499578 5_1:+54831375 Msa0737570:three_prime_UTR
CGGGGAGCAACTACAAAAGA+TGG 0.503358 5_1:+54827768 Msa0737570:CDS
GGAGCAAGATCTTAACAGTA+AGG 0.504956 5_1:+54824758 Msa0737570:CDS
AAGGATATTACGAGTATGCC+TGG 0.507027 5_1:+54825258 Msa0737570:CDS
CGGAATCCCAGTTGAGTTGG+TGG 0.507450 5_1:+54824526 Msa0737570:CDS
CCTTCAGAACCAACGAAGAA+AGG 0.509478 5_1:+54826552 Msa0737570:CDS
TACAATCCAAGGGAAACATC+AGG 0.511597 5_1:+54829678 Msa0737570:CDS
GAGGTTATGTACCGCCCACT+TGG 0.513287 5_1:-54830135 None:intergenic
AGTACCTGAAGGACCCTGAC+TGG 0.513631 5_1:+54829638 Msa0737570:CDS
TAAAACGGGATTACGTGTAC+AGG 0.516022 5_1:+54826406 Msa0737570:CDS
TCACACCGGAGCTGCAGTTG+TGG 0.516552 5_1:+54827582 Msa0737570:CDS
TGTTTCCTCTCGGGGCAGTA+CGG 0.517605 5_1:-54824624 None:intergenic
CTTAATCATGCTTTAGGGGT+AGG 0.519030 5_1:+54827199 Msa0737570:CDS
CACTTTGTAGTCATCAGCTC+GGG 0.519310 5_1:-54827734 None:intergenic
GTACTGCCCCGAGAGGAAAC+AGG 0.521545 5_1:+54824626 Msa0737570:CDS
GCTAGGGTTATATAATGCAT+TGG 0.522455 5_1:+54827621 Msa0737570:CDS
TATGGCTCACTGCTCTATCA+AGG 0.523383 5_1:+54824491 Msa0737570:exon
CAACTGGGATTCCGCTATAC+CGG 0.523963 5_1:-54824517 None:intergenic
ACTTCGCATGGACATTGTGA+TGG 0.524468 5_1:+54827924 Msa0737570:CDS
ATCCTATACAGAACTCAAGA+AGG 0.524856 5_1:+54827090 Msa0737570:CDS
TGAACTACTCCGACCAATCC+CGG 0.527270 5_1:-54824682 None:intergenic
CAATGAAATTACACTTCGCA+TGG 0.529219 5_1:+54827912 Msa0737570:CDS
GAAGAGAAGTGCTAAAGAGA+AGG 0.536675 5_1:+54824707 Msa0737570:CDS
CTTGAACACGCTTCTGGGGT+CGG 0.536954 5_1:+54825901 Msa0737570:CDS
TGAGAAATTACTGTTTGTCC+TGG 0.537343 5_1:-54824988 None:intergenic
GGAAAACAATCTTATGAATG+TGG 0.540930 5_1:+54827348 Msa0737570:CDS
ACATACAACCAACTTATTCG+AGG 0.540968 5_1:-54825760 None:intergenic
CATAATATTGAGTTGAGCCT+AGG 0.542422 5_1:+54824460 Msa0737570:five_prime_UTR
TTAAAATTTCTACAATCCAA+GGG 0.542987 5_1:+54829668 Msa0737570:CDS
AAAGGCAGTTTGTATGGCCA+TGG 0.546980 5_1:+54827419 Msa0737570:CDS
GAAGAATCACCTTCAATCAC+AGG 0.550222 5_1:-54826027 None:intergenic
GAATGAACTGAGAAACGAGA+TGG 0.550613 5_1:+54830056 Msa0737570:CDS
ACTCAAAACAGGGAAACAAA+AGG 0.551178 5_1:+54824572 Msa0737570:CDS
CACTGCTCTATCAAGGATAC+CGG 0.553781 5_1:+54824498 Msa0737570:CDS
CTTCTGAACTGTGTTCGTTG+TGG 0.553927 5_1:+54829611 Msa0737570:CDS
ACACGAATATCGGCACAACT+TGG 0.554139 5_1:-54829505 None:intergenic
TAAGAGCAATGATGAACTGC+AGG 0.555224 5_1:+54829358 Msa0737570:CDS
ATGGCCATGGACTGGGATTG+TGG 0.557685 5_1:+54827432 Msa0737570:CDS
CCAGTATCCTTGTTAGAGCA+TGG 0.557823 5_1:-54825727 None:intergenic
AACTAGAACTGACATTGAAA+AGG 0.558417 5_1:+54826473 Msa0737570:CDS
AAAATCCGGTCTTTATGCGT+GGG 0.559938 5_1:+54827708 Msa0737570:CDS
CAAGATCTTAACAGTAAGGA+TGG 0.560367 5_1:+54824762 Msa0737570:CDS
TCAAGGATACCGATATAAGT+TGG 0.561942 5_1:+54825019 Msa0737570:CDS
GGCAACCCACGCATAAAGAC+CGG 0.562276 5_1:-54827713 None:intergenic
CGGAATGTGAAAACCTCAGA+CGG 0.562795 5_1:+54825084 Msa0737570:CDS
ACATATAGATTTAAGAGAGA+AGG 0.562950 5_1:+54829280 Msa0737570:CDS
AAGAGAGCGACTTTGCAAGA+AGG 0.565508 5_1:+54830183 Msa0737570:CDS
CACGGCTCCATGCTCTAACA+AGG 0.565992 5_1:+54825720 Msa0737570:CDS
TGTGGTATATCGCAAACAGC+AGG 0.566782 5_1:-54825315 None:intergenic
GCATCGAGATCTATAGATCA+AGG 0.566792 5_1:+54824786 Msa0737570:CDS
GAACTCCTGAATCATGCCAC+CGG 0.567244 5_1:+54824663 Msa0737570:CDS
ACTTGATGTTCTGAATATGA+TGG 0.568049 5_1:+54829250 Msa0737570:CDS
GGAACAGTCACTTCGAGACA+TGG 0.568492 5_1:+54829301 Msa0737570:CDS
ACAACTGAAACTCTCGGCCG+AGG 0.569131 5_1:-54824601 None:intergenic
ATGAAGCACATGGAAGATGA+TGG 0.570978 5_1:+54829224 Msa0737570:CDS
GGTACAAAATTGATAAGTCA+AGG 0.572412 5_1:+54825688 Msa0737570:intron
AATGAACTGAGAAACGAGAT+GGG 0.572599 5_1:+54830057 Msa0737570:CDS
ATAAATGAATATAATCCAAG+TGG 0.576645 5_1:+54830120 Msa0737570:CDS
CCTTGAACATGCTTCCGGGG+TGG 0.576708 5_1:+54826434 Msa0737570:CDS
CTTCGCATGGACATTGTGAT+GGG 0.577002 5_1:+54827925 Msa0737570:CDS
TGAACTGCAGGAAGCTCGAA+AGG 0.577266 5_1:+54829370 Msa0737570:CDS
TATAATCCTGTTTCCTCTCG+GGG 0.577529 5_1:-54824632 None:intergenic
TAGCGGAATCCCAGTTGAGT+TGG 0.580792 5_1:+54824523 Msa0737570:CDS
ATCATGCCACCGGGATTGGT+CGG 0.582293 5_1:+54824673 Msa0737570:CDS
TTTCACTAAAGCTAGATGGT+TGG 0.583028 5_1:-54827260 None:intergenic
TCCTATACAGAACTCAAGAA+GGG 0.583243 5_1:+54827091 Msa0737570:CDS
AATTTAATAAAAGTTGGCTA+GGG 0.584434 5_1:+54827605 Msa0737570:CDS
AAAGAGAGGTATCAGAGAGA+AGG 0.584942 5_1:+54825939 Msa0737570:CDS
CAAGTGATCCTCGAATAAGT+TGG 0.585633 5_1:+54825752 Msa0737570:CDS
GGATCTTATGACTATGAATG+TGG 0.586587 5_1:+54827294 Msa0737570:CDS
GACCTGTTACAGTTACTCCT+CGG 0.587093 5_1:-54827006 None:intergenic
TGAAAGTGGTTCCAAGCTAA+GGG 0.589876 5_1:+54827498 Msa0737570:CDS
AAGGAGAAGTGTATTGGAGA+AGG 0.590402 5_1:+54827237 Msa0737570:CDS
TGAGCCATAGAGTTTCTCCT+AGG 0.590843 5_1:-54824477 None:intergenic
AATCCTTGAACACGCTTCTG+GGG 0.591372 5_1:+54825897 Msa0737570:CDS
GGACGATGTATTGGTGAAAG+TGG 0.596980 5_1:+54827484 Msa0737570:CDS
CAAAGAGTTCGGACTCTACG+TGG 0.596988 5_1:-54827547 None:intergenic
AACTCCTGAATCATGCCACC+GGG 0.601267 5_1:+54824664 Msa0737570:CDS
AAGCATAAGCACAAAGCTTG+TGG 0.603020 5_1:-54831130 None:intergenic
CAGAGTAGTTCGCAAAAGAG+AGG 0.606428 5_1:+54825925 Msa0737570:CDS
ACTCCTTAATCATGCTTTAG+GGG 0.612063 5_1:+54827195 Msa0737570:CDS
ACATTCTTGTCAATTCTGAA+AGG 0.612702 5_1:+54827401 Msa0737570:CDS
AGGGATGAATACCGAATAAG+GGG 0.613072 5_1:+54827517 Msa0737570:CDS
GTTACGAACACAATAAGTCC+AGG 0.613921 5_1:+54824970 Msa0737570:intron
TGGAATTCATGGGGTCACAC+CGG 0.616709 5_1:+54827568 Msa0737570:CDS
ACGTTAGTGTACAAATTTAG+GGG 0.618876 5_1:-54831195 None:intergenic
GGAATGTGAAAACCTCAGAC+GGG 0.619496 5_1:+54825085 Msa0737570:CDS
AGGCACGTAATGAAAGTGAA+AGG 0.620125 5_1:+54828302 Msa0737570:CDS
TTAACCACAATCCCAGTCCA+TGG 0.620258 5_1:-54827436 None:intergenic
AGGATACCGATATAAGTTGG+TGG 0.620895 5_1:+54825022 Msa0737570:CDS
AATCCTTGAACATGCTTCCG+GGG 0.621612 5_1:+54826431 Msa0737570:CDS
TGCGTAATTCCATAATTCCG+AGG 0.622277 5_1:-54830154 None:intergenic
AACAGGTCACCTCTCTGAGA+AGG 0.622552 5_1:+54827021 Msa0737570:CDS
GAGATACCACCAACTCAACT+GGG 0.622653 5_1:-54824532 None:intergenic
CTTACGAAGAACTCAAAACA+GGG 0.629180 5_1:+54824562 Msa0737570:CDS
CAAAGTGAGAATCTCAGATG+AGG 0.630595 5_1:+54825819 Msa0737570:CDS
CGAAGAAGTTTACAAAGCTG+TGG 0.631485 5_1:+54830080 Msa0737570:CDS
TAGAACTGACATTGAAAAGG+CGG 0.632651 5_1:+54826476 Msa0737570:CDS
CTTGCTCAATCTCACAGTCA+AGG 0.633620 5_1:+54827961 Msa0737570:CDS
TAAATGAATATAATCCAAGT+GGG 0.634711 5_1:+54830121 Msa0737570:CDS
GCGTATGAATTAGATTGTCA+CGG 0.637693 5_1:+54827655 Msa0737570:CDS
AAAACAGGATTATTTGTACA+GGG 0.638147 5_1:+54825137 Msa0737570:CDS
GAATTATGGAATTACGCAGA+GGG 0.640718 5_1:+54830159 Msa0737570:CDS
TATCAAGGATACCGGTATAG+CGG 0.641173 5_1:+54824506 Msa0737570:CDS
TGAGATACTCCAACCCACCC+CGG 0.643091 5_1:-54826448 None:intergenic
TAGGTCAAAGTGACGCACAA+AGG 0.645388 5_1:+54827218 Msa0737570:CDS
AAAACCGGACTATGTGTACA+GGG 0.646630 5_1:+54825873 Msa0737570:CDS
CGAACTCTTTGGAATTCATG+GGG 0.646735 5_1:+54827559 Msa0737570:CDS
AGAAGTTTACAAAGCTGTGG+TGG 0.648609 5_1:+54830083 Msa0737570:CDS
GATACTTCAAGCTTCTGTGG+AGG 0.653683 5_1:+54831081 Msa0737570:CDS
AAGGATCTTATAAATGTCGG+TGG 0.656155 5_1:+54826528 Msa0737570:CDS
ACTAAATGTCATGAAGCACA+TGG 0.660073 5_1:+54829214 Msa0737570:CDS
ATATTCGTGTGAAGAGAATG+GGG 0.660732 5_1:+54829518 Msa0737570:CDS
GCATATGAAAGTCCCGTCTG+AGG 0.662282 5_1:-54825097 None:intergenic
TATTAGCATCCTTCTCAGAG+AGG 0.663538 5_1:-54827030 None:intergenic
AAGTGGGCGGTACATAACCT+CGG 0.665757 5_1:+54830137 Msa0737570:CDS
GTACGGACAACTGAAACTCT+CGG 0.669727 5_1:-54824607 None:intergenic
CCGAGCTGATGACTACAAAG+TGG 0.670561 5_1:+54827735 Msa0737570:CDS
AAGTCAAGGACAAACTGTCA+CGG 0.680760 5_1:+54825702 Msa0737570:CDS
ACTCAAGAAGGGTATTCACA+AGG 0.682005 5_1:+54827102 Msa0737570:CDS
AAAACGGGATTACGTGTACA+GGG 0.683449 5_1:+54826407 Msa0737570:CDS
ATGAATATAATCCAAGTGGG+CGG 0.689994 5_1:+54830124 Msa0737570:CDS
GCAAGTGAAAGTCTTATCTG+AGG 0.693684 5_1:-54826358 None:intergenic
AGTAGAGACATAATTTGTGG+TGG 0.696631 5_1:+54831372 Msa0737570:three_prime_UTR
GGAATTATGGAATTACGCAG+AGG 0.702790 5_1:+54830158 Msa0737570:CDS
GTTGGATGAAGAGATTAACA+AGG 0.706574 5_1:+54828330 Msa0737570:CDS
CAAAGTGGACAACATAATCG+GGG 0.713082 5_1:+54827750 Msa0737570:CDS
GTTGTCCGTACTGCCCCGAG+AGG 0.713527 5_1:+54824619 Msa0737570:CDS
GTTGTGGGAAGAGTACCTGA+AGG 0.717510 5_1:+54829627 Msa0737570:CDS
GGCACCATAATGTTGAACCG+AGG 0.724080 5_1:+54826989 Msa0737570:intron
TATTCGTGTGAAGAGAATGG+GGG 0.746922 5_1:+54829519 Msa0737570:CDS
ACTACTCCGACCAATCCCGG+TGG 0.792342 5_1:-54824679 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAATTAATAAAAACAAA+TGG + chr5_1:54823511-54823530 Msa0737570:intron 10.0%
!! AAGAATTAATAAAAACAAAT+GGG + chr5_1:54823512-54823531 Msa0737570:intron 10.0%
!! AAAGTAGAAAATAATGAAAT+GGG - chr5_1:54823297-54823316 None:intergenic 15.0%
!! TAAAGTAGAAAATAATGAAA+TGG - chr5_1:54823298-54823317 None:intergenic 15.0%
!! AAAACATAATTGAAGTTTAA+AGG - chr5_1:54823345-54823364 None:intergenic 15.0%
!!! ACAATATTAATCAGTTTTAT+TGG - chr5_1:54824876-54824895 None:intergenic 15.0%
!!! TTCTAGTTAATATATTTTTC+TGG + chr5_1:54825350-54825369 Msa0737570:intron 15.0%
!!! TCTAGTTAATATATTTTTCT+GGG + chr5_1:54825351-54825370 Msa0737570:intron 15.0%
!! ACTATATATAAAAGAGATAT+CGG + chr5_1:54825423-54825442 Msa0737570:intron 15.0%
!!! TTTAATGAAATATTTGAAAC+AGG + chr5_1:54825975-54825994 Msa0737570:CDS 15.0%
!! AATATCATTGTTAATTGAAT+TGG - chr5_1:54826120-54826139 None:intergenic 15.0%
!! ATTCAATTAACAATGATATT+TGG + chr5_1:54826120-54826139 Msa0737570:intron 15.0%
!!! AAAACAATATTTTGTTTTTC+AGG + chr5_1:54826195-54826214 Msa0737570:intron 15.0%
!!! GTTTTATCCTTTTATTATTA+GGG - chr5_1:54826392-54826411 None:intergenic 15.0%
!! CTAATAATAAAAGGATAAAA+CGG + chr5_1:54826391-54826410 Msa0737570:CDS 15.0%
!! TAATAATAAAAGGATAAAAC+GGG + chr5_1:54826392-54826411 Msa0737570:CDS 15.0%
!!! AATGGGATAATAAATTTTAA+GGG + chr5_1:54826786-54826805 Msa0737570:intron 15.0%
!!! ATAAATTTTAAGGGTATTAT+AGG + chr5_1:54826795-54826814 Msa0737570:intron 15.0%
!! AAACAAAATTTAGAAACAAT+TGG - chr5_1:54828041-54828060 None:intergenic 15.0%
!! AAAGTGAAAATATTGTTTAA+GGG + chr5_1:54828424-54828443 Msa0737570:intron 15.0%
!! ATTCTTCAATAATAATGATA+TGG + chr5_1:54828595-54828614 Msa0737570:intron 15.0%
!! AAGCATTAAAACAAATTATA+CGG - chr5_1:54828772-54828791 None:intergenic 15.0%
!!! GCTATTTCTATAATAAATAA+AGG + chr5_1:54830484-54830503 Msa0737570:intron 15.0%
!! AAGTAGAAAATAATGAAATG+GGG - chr5_1:54823296-54823315 None:intergenic 20.0%
!!! TTTTGCCTTAATTAATTCAT+TGG + chr5_1:54823416-54823435 Msa0737570:intron 20.0%
!!! AGTTAACTTGAAATGTTTTA+AGG + chr5_1:54823474-54823493 Msa0737570:intron 20.0%
!!! GTTAACTTGAAATGTTTTAA+GGG + chr5_1:54823475-54823494 Msa0737570:intron 20.0%
!! TACTTGATGTTGAATTTATA+AGG + chr5_1:54823576-54823595 Msa0737570:intron 20.0%
!!! TTAAGTTGTTTATCCAAATT+GGG - chr5_1:54823618-54823637 None:intergenic 20.0%
!!! ATTAAGTTGTTTATCCAAAT+TGG - chr5_1:54823619-54823638 None:intergenic 20.0%
!! ATTTAGTGAATTTAAGTCAT+TGG + chr5_1:54823855-54823874 Msa0737570:intron 20.0%
!! ATCTGAGAAGTTATTAAAAA+CGG - chr5_1:54823942-54823961 None:intergenic 20.0%
!!! TTTTTAATAACTTCTCAGAT+TGG + chr5_1:54823942-54823961 Msa0737570:intron 20.0%
!! TGACTGTAATAAATTTAGAT+TGG + chr5_1:54823965-54823984 Msa0737570:intron 20.0%
!!! TTTTGTGACATTTTTGTATT+AGG + chr5_1:54824251-54824270 Msa0737570:intron 20.0%
!!! TATTTTAGAGCTTTGAATAT+AGG - chr5_1:54824304-54824323 None:intergenic 20.0%
!! AATATTAGTATTCGTTGTTT+AGG - chr5_1:54824420-54824439 None:intergenic 20.0%
!!! AATATTGATTTTTGTCTTTC+AGG + chr5_1:54824434-54824453 Msa0737570:intron 20.0%
!!! TTTTGATTAAATTATTTGCC+TGG + chr5_1:54824899-54824918 Msa0737570:intron 20.0%
!!! AATAATCCTGTTTTCTATTA+GGG - chr5_1:54825131-54825150 None:intergenic 20.0%
!!! AAATAATCCTGTTTTCTATT+AGG - chr5_1:54825132-54825151 None:intergenic 20.0%
!! TTTGTTGAAATATTTGGAAA+AGG + chr5_1:54825239-54825258 Msa0737570:CDS 20.0%
!! AAAATAATATCACTGTGAAA+TGG - chr5_1:54825399-54825418 None:intergenic 20.0%
!! CTATATATAAAAGAGATATC+GGG + chr5_1:54825424-54825443 Msa0737570:intron 20.0%
!! TTTATAGAAAATCAGAAAGA+CGG + chr5_1:54825571-54825590 Msa0737570:intron 20.0%
!!! AAAACTAACTTTTATCTTTC+AGG + chr5_1:54825667-54825686 Msa0737570:intron 20.0%
!!! CGTTTTATCCTTTTATTATT+AGG - chr5_1:54826393-54826412 None:intergenic 20.0%
!! TTTGGTCAAATATTTGAAAA+AGG + chr5_1:54826509-54826528 Msa0737570:CDS 20.0%
!! AAAAAGGATCTTATAAATGT+CGG + chr5_1:54826525-54826544 Msa0737570:CDS 20.0%
!! ATTTAATATTGCATTGAACT+AGG - chr5_1:54826712-54826731 None:intergenic 20.0%
!!! GAATGGGATAATAAATTTTA+AGG + chr5_1:54826785-54826804 Msa0737570:intron 20.0%
!! AATGACAAATAAAGAAACAA+AGG + chr5_1:54826860-54826879 Msa0737570:intron 20.0%
!! ATGACAAATAAAGAAACAAA+GGG + chr5_1:54826861-54826880 Msa0737570:intron 20.0%
!! TTTAGTGAAATATTTGGAAA+AGG + chr5_1:54827273-54827292 Msa0737570:CDS 20.0%
!!! TTTTCCAAATATTTATTTGC+AGG - chr5_1:54827334-54827353 None:intergenic 20.0%
!! TTGTGGAATTTAATAAAAGT+TGG + chr5_1:54827599-54827618 Msa0737570:CDS 20.0%
!! AATTTAATAAAAGTTGGCTA+GGG + chr5_1:54827605-54827624 Msa0737570:CDS 20.0%
!! CAAAGTGAAAATATTGTTTA+AGG + chr5_1:54828423-54828442 Msa0737570:intron 20.0%
!! GAAAAAAAGAGGAAAAAAAT+TGG - chr5_1:54828491-54828510 None:intergenic 20.0%
!!! AATAAATAATGCCAAACTTT+TGG - chr5_1:54828560-54828579 None:intergenic 20.0%
!!! TGGATTGTAGAAATTTTAAA+TGG - chr5_1:54829667-54829686 None:intergenic 20.0%
!!! TTTAAAATTTCTACAATCCA+AGG + chr5_1:54829667-54829686 Msa0737570:CDS 20.0%
!! TTAAAATTTCTACAATCCAA+GGG + chr5_1:54829668-54829687 Msa0737570:CDS 20.0%
!!! AAATAATGCAATGTACTTTT+AGG - chr5_1:54829950-54829969 None:intergenic 20.0%
!! ATAAATGAATATAATCCAAG+TGG + chr5_1:54830120-54830139 Msa0737570:CDS 20.0%
!! TAAATGAATATAATCCAAGT+GGG + chr5_1:54830121-54830140 Msa0737570:CDS 20.0%
!!! TAAAATTGGAATTTTGAGAA+AGG - chr5_1:54830373-54830392 None:intergenic 20.0%
!! TGTTGTGAATACTATAAAAT+TGG - chr5_1:54830387-54830406 None:intergenic 20.0%
!! CAAAATCAAGTTAATCAATT+AGG - chr5_1:54830719-54830738 None:intergenic 20.0%
!! TAGGAAATACATCATATATT+TGG + chr5_1:54831050-54831069 Msa0737570:CDS 20.0%
!! TGATGTACATGTTTATTAAA+TGG - chr5_1:54831234-54831253 None:intergenic 20.0%
!!! TTATGCACTTGTTTTTTTAT+TGG + chr5_1:54831400-54831419 Msa0737570:three_prime_UTR 20.0%
! CACATCCAATGAATTAATTA+AGG - chr5_1:54823424-54823443 None:intergenic 25.0%
! ATACAAAAATGTCACAAAAC+AGG - chr5_1:54824250-54824269 None:intergenic 25.0%
!!! TTTGGCTTTGGTAAAATATT+TGG + chr5_1:54824737-54824756 Msa0737570:CDS 25.0%
! AAAACAGGATTATTTGTACA+GGG + chr5_1:54825137-54825156 Msa0737570:CDS 25.0%
!! TCTTGCTTTGTTGAAATATT+TGG + chr5_1:54825233-54825252 Msa0737570:CDS 25.0%
!! ATTTTTCTGGGTAATTGAAT+AGG + chr5_1:54825363-54825382 Msa0737570:intron 25.0%
!! TTTTATCAAGAACTCAAGAA+TGG + chr5_1:54825790-54825809 Msa0737570:CDS 25.0%
! ATTCAGTATATTCAGTAACT+AGG - chr5_1:54826093-54826112 None:intergenic 25.0%
!! TTTTATCAAAGCTTAACAGT+CGG + chr5_1:54826168-54826187 Msa0737570:intron 25.0%
!! ACTTTTATCAGAATCTTTGT+CGG - chr5_1:54826265-54826284 None:intergenic 25.0%
! AGTGCATCTCAAATAAATTT+AGG + chr5_1:54826282-54826301 Msa0737570:CDS 25.0%
! GTGCATCTCAAATAAATTTA+GGG + chr5_1:54826283-54826302 Msa0737570:CDS 25.0%
!! TTTTATTATTAGGGCAGTAT+GGG - chr5_1:54826383-54826402 None:intergenic 25.0%
! GGCATTTAAAAAAGATTAGA+GGG - chr5_1:54826648-54826667 None:intergenic 25.0%
! CATTAAATATCATTGTGAGT+TGG - chr5_1:54826906-54826925 None:intergenic 25.0%
! CAACTCACAATGATATTTAA+TGG + chr5_1:54826904-54826923 Msa0737570:intron 25.0%
! CACAATGATATTTAATGGAA+TGG + chr5_1:54826909-54826928 Msa0737570:intron 25.0%
!! TATAATTGCATTTTCTCTTG+GGG - chr5_1:54827165-54827184 None:intergenic 25.0%
!! CTATAATTGCATTTTCTCTT+GGG - chr5_1:54827166-54827185 None:intergenic 25.0%
! AATATTTCACTAAAGCTAGA+TGG - chr5_1:54827267-54827286 None:intergenic 25.0%
!!! TCTAGCTTTAGTGAAATATT+TGG + chr5_1:54827267-54827286 Msa0737570:CDS 25.0%
!! TATTTATTTGCAGGCTTTAA+CGG - chr5_1:54827325-54827344 None:intergenic 25.0%
! AAAGCCTGCAAATAAATATT+TGG + chr5_1:54827327-54827346 Msa0737570:CDS 25.0%
! GAATTTAATAAAAGTTGGCT+AGG + chr5_1:54827604-54827623 Msa0737570:CDS 25.0%
! TCTTATACTGAACAAAAATC+CGG + chr5_1:54827694-54827713 Msa0737570:CDS 25.0%
! TAAAACAATACCTGAAATCA+TGG + chr5_1:54827795-54827814 Msa0737570:CDS 25.0%
! GAACAACAAGATAAAAGAAA+TGG + chr5_1:54827879-54827898 Msa0737570:CDS 25.0%
! AAAAAGGGAAAGAAAAAAAG+AGG - chr5_1:54828502-54828521 None:intergenic 25.0%
! GAATCTATAAACCAAAAGTT+TGG + chr5_1:54828546-54828565 Msa0737570:intron 25.0%
! TCTTGTCAAATGTTTCATTT+AGG + chr5_1:54828625-54828644 Msa0737570:intron 25.0%
! AAAAGCAAAAAACATAAGCA+TGG - chr5_1:54828652-54828671 None:intergenic 25.0%
! GAAAAATCACTTTCTTCAAA+TGG + chr5_1:54828685-54828704 Msa0737570:CDS 25.0%
! ACTAAATGTGAAACAAAAAC+TGG + chr5_1:54829163-54829182 Msa0737570:CDS 25.0%
! CTCTCTTAAATCTATATGTA+AGG - chr5_1:54829279-54829298 None:intergenic 25.0%
! ACATATAGATTTAAGAGAGA+AGG + chr5_1:54829280-54829299 Msa0737570:CDS 25.0%
!!! GATATGATTTTTCAATCCAA+CGG - chr5_1:54829721-54829740 None:intergenic 25.0%
!! TCTTACGTGCTTTTATTAAA+CGG - chr5_1:54829820-54829839 None:intergenic 25.0%
! GAAATTGCATAGACAAAAAA+GGG + chr5_1:54830230-54830249 Msa0737570:intron 25.0%
! AAATTGCATAGACAAAAAAG+GGG + chr5_1:54830231-54830250 Msa0737570:intron 25.0%
! ATGATAAGAGCTTATGTTAT+AGG - chr5_1:54830446-54830465 None:intergenic 25.0%
! ATAAGCTCTTATCATATAAG+TGG + chr5_1:54830451-54830470 Msa0737570:intron 25.0%
!! TTTATTTCCATAAGCTTTTC+AGG - chr5_1:54830565-54830584 None:intergenic 25.0%
! TTACTGACATAAGCATTTAT+GGG - chr5_1:54830645-54830664 None:intergenic 25.0%
! TTTACTGACATAAGCATTTA+TGG - chr5_1:54830646-54830665 None:intergenic 25.0%
! AATAAATCCAAAGATATGCT+TGG - chr5_1:54830688-54830707 None:intergenic 25.0%
!! TAATTGAGTTTGAAGTAAAG+TGG + chr5_1:54830757-54830776 Msa0737570:intron 25.0%
! AAGTTTCGTGTAAAAATTAG+TGG + chr5_1:54830816-54830835 Msa0737570:intron 25.0%
! TTATATTACTCGTCAAACTA+AGG + chr5_1:54830864-54830883 Msa0737570:intron 25.0%
! AGTTACATCATAAAACAATG+TGG - chr5_1:54830943-54830962 None:intergenic 25.0%
!!! ATTGTTTTATGATGTAACTG+TGG + chr5_1:54830944-54830963 Msa0737570:intron 25.0%
! TACGTTAGTGTACAAATTTA+GGG - chr5_1:54831199-54831218 None:intergenic 25.0%
! TTACGTTAGTGTACAAATTT+AGG - chr5_1:54831200-54831219 None:intergenic 25.0%
!!! TTGCTTTTATGTATTCAACA+AGG + chr5_1:54831281-54831300 Msa0737570:three_prime_UTR 25.0%
!! TATTCGAACATTTTCTTTTG+TGG + chr5_1:54831340-54831359 Msa0737570:three_prime_UTR 25.0%
TGAAATTGAAGAAGAAGCTA+TGG - chr5_1:54823165-54823184 None:intergenic 30.0%
TGATGAAGAAAAAAAGAGGA+AGG - chr5_1:54823239-54823258 None:intergenic 30.0%
TGCATGATGAAGAAAAAAAG+AGG - chr5_1:54823243-54823262 None:intergenic 30.0%
! CTTTGTTGATTATGTGATGA+TGG + chr5_1:54823449-54823468 Msa0737570:intron 30.0%
!! TATAAGGACTTGTTGTATTC+AGG + chr5_1:54823592-54823611 Msa0737570:intron 30.0%
AATATGCTGAAAACAACGTA+TGG + chr5_1:54823712-54823731 Msa0737570:intron 30.0%
ATATGCTGAAAACAACGTAT+GGG + chr5_1:54823713-54823732 Msa0737570:intron 30.0%
TCCATTGTAAGCATTAAATC+TGG + chr5_1:54823994-54824013 Msa0737570:intron 30.0%
TCCAGATTTAATGCTTACAA+TGG - chr5_1:54823998-54824017 None:intergenic 30.0%
ATTCGTGCTAAAATTCAAGT+AGG + chr5_1:54824081-54824100 Msa0737570:intron 30.0%
CTTTGAATATAGGATTGCAT+TGG - chr5_1:54824294-54824313 None:intergenic 30.0%
TACTTCACGATTGTATTTAG+TGG + chr5_1:54824374-54824393 Msa0737570:intron 30.0%
GAAACAAAAGGTAAAAACCT+CGG + chr5_1:54824584-54824603 Msa0737570:CDS 30.0%
AATTTCTCACTGTTCTATCA+AGG + chr5_1:54825002-54825021 Msa0737570:CDS 30.0%
TACATACCACCAACTTATAT+CGG - chr5_1:54825031-54825050 None:intergenic 30.0%
GAAAACAGGATTATTTGTAC+AGG + chr5_1:54825136-54825155 Msa0737570:CDS 30.0%
CTAGAACGAAAAAATTTCTG+TGG - chr5_1:54825336-54825355 None:intergenic 30.0%
ATAAAAGAGATATCGGGATT+TGG + chr5_1:54825430-54825449 Msa0737570:intron 30.0%
GGTACAAAATTGATAAGTCA+AGG + chr5_1:54825688-54825707 Msa0737570:intron 30.0%
!!! TAGTCCGGTTTTTTCATTTT+CGG - chr5_1:54825865-54825884 None:intergenic 30.0%
AACATATGAACAGCTCAAAA+AGG + chr5_1:54826317-54826336 Msa0737570:CDS 30.0%
ACATATGAACAGCTCAAAAA+GGG + chr5_1:54826318-54826337 Msa0737570:CDS 30.0%
! CTTTTATTATTAGGGCAGTA+TGG - chr5_1:54826384-54826403 None:intergenic 30.0%
CATACTGCCCTAATAATAAA+AGG + chr5_1:54826382-54826401 Msa0737570:CDS 30.0%
AACTAGAACTGACATTGAAA+AGG + chr5_1:54826473-54826492 Msa0737570:CDS 30.0%
TAAAAAAGATTAGAGGGAGT+AGG - chr5_1:54826642-54826661 None:intergenic 30.0%
CGGCATTTAAAAAAGATTAG+AGG - chr5_1:54826649-54826668 None:intergenic 30.0%
ACACAATTTATCAACAGAAG+CGG - chr5_1:54826669-54826688 None:intergenic 30.0%
TAGGAAAATGACATGTAAGT+AGG - chr5_1:54826693-54826712 None:intergenic 30.0%
!!! AACTCCTTATTTTGTTTTGC+AGG + chr5_1:54826968-54826987 Msa0737570:intron 30.0%
! CCTATAATTGCATTTTCTCT+TGG - chr5_1:54827167-54827186 None:intergenic 30.0%
CCAAGAGAAAATGCAATTAT+AGG + chr5_1:54827164-54827183 Msa0737570:CDS 30.0%
AACTCCTTAATCATGCTTTA+GGG + chr5_1:54827194-54827213 Msa0737570:CDS 30.0%
GGAAAACAATCTTATGAATG+TGG + chr5_1:54827348-54827367 Msa0737570:CDS 30.0%
! ACAAGAATGTTTTCATTCAC+TGG - chr5_1:54827391-54827410 None:intergenic 30.0%
ACATTCTTGTCAATTCTGAA+AGG + chr5_1:54827401-54827420 Msa0737570:CDS 30.0%
! ATAATGCATTGGCATTTGAA+AGG + chr5_1:54827632-54827651 Msa0737570:CDS 30.0%
! TAATGCATTGGCATTTGAAA+GGG + chr5_1:54827633-54827652 Msa0737570:CDS 30.0%
ATTAGATTGTCACGGTAAAA+AGG + chr5_1:54827663-54827682 Msa0737570:CDS 30.0%
TACAAAGTGGACAACATAAT+CGG + chr5_1:54827748-54827767 Msa0737570:CDS 30.0%
TGAAAGTGAAAGGAAAAAGT+TGG + chr5_1:54828312-54828331 Msa0737570:CDS 30.0%
! ATCCTTGTTTGGAGAAAAAA+GGG - chr5_1:54828517-54828536 None:intergenic 30.0%
!!! CTTTTGGTTTATAGATTCCT+CGG - chr5_1:54828544-54828563 None:intergenic 30.0%
!! TATCCAAAAGTGTTAATGTC+TGG + chr5_1:54828798-54828817 Msa0737570:intron 30.0%
! AATCCAGACATTAACACTTT+TGG - chr5_1:54828804-54828823 None:intergenic 30.0%
!! GATTAGTTCTGTTTATGGTT+CGG + chr5_1:54828820-54828839 Msa0737570:intron 30.0%
ACTGAACTGGCATATATATT+TGG - chr5_1:54828964-54828983 None:intergenic 30.0%
AAATATATATGCCAGTTCAG+TGG + chr5_1:54828963-54828982 Msa0737570:intron 30.0%
!!! TTTTTCAAGCTGGATGATTT+TGG - chr5_1:54829141-54829160 None:intergenic 30.0%
!!! CATTTAGTTGTTTTTCAAGC+TGG - chr5_1:54829151-54829170 None:intergenic 30.0%
TGTGAAACAAAAACTGGAAT+TGG + chr5_1:54829169-54829188 Msa0737570:CDS 30.0%
! ACTTGATGTTCTGAATATGA+TGG + chr5_1:54829250-54829269 Msa0737570:CDS 30.0%
! TTCTTCATAGCTTCTAGAAA+TGG - chr5_1:54829559-54829578 None:intergenic 30.0%
TGTATTAGAAAATTGACCGT+TGG + chr5_1:54829702-54829721 Msa0737570:intron 30.0%
ATTAATCTTGACGTACTTCA+GGG - chr5_1:54829796-54829815 None:intergenic 30.0%
GGAAATTGCATAGACAAAAA+AGG + chr5_1:54830229-54830248 Msa0737570:intron 30.0%
TATTCCATTAGAAACATACC+AGG - chr5_1:54830269-54830288 None:intergenic 30.0%
!! GAATTTTGAGAAAGGATTTG+TGG - chr5_1:54830365-54830384 None:intergenic 30.0%
TTAAGTCCTGTTTGGATAAT+CGG + chr5_1:54830408-54830427 Msa0737570:intron 30.0%
! ATTATACCGATTATCCAAAC+AGG - chr5_1:54830417-54830436 None:intergenic 30.0%
GATGAAAACAACTTATAGAC+AGG + chr5_1:54830585-54830604 Msa0737570:intron 30.0%
! AAGCATTTATGGGACTATTT+TGG - chr5_1:54830635-54830654 None:intergenic 30.0%
TCAAGTTAATCAATTAGGCA+GGG - chr5_1:54830714-54830733 None:intergenic 30.0%
ATCAAGTTAATCAATTAGGC+AGG - chr5_1:54830715-54830734 None:intergenic 30.0%
GTGCTTATGCTTATTCATTT+AGG + chr5_1:54831141-54831160 Msa0737570:CDS 30.0%
CTTATGCTTATTCATTTAGG+TGG + chr5_1:54831144-54831163 Msa0737570:CDS 30.0%
ATTTAGGGGCTTAAAAGTTT+AGG - chr5_1:54831184-54831203 None:intergenic 30.0%
ACGTTAGTGTACAAATTTAG+GGG - chr5_1:54831198-54831217 None:intergenic 30.0%
! CTTTTATGTATTCAACAAGG+TGG + chr5_1:54831284-54831303 Msa0737570:three_prime_UTR 30.0%
TGAAGTAGAGACATAATTTG+TGG + chr5_1:54831369-54831388 Msa0737570:three_prime_UTR 30.0%
! AAGAAGCTATGGAGTTTGTT+TGG - chr5_1:54823154-54823173 None:intergenic 35.0%
CAGTACTTTCAATCTCTTCA+AGG + chr5_1:54823205-54823224 Msa0737570:five_prime_UTR 35.0%
AATACCATTTGAGAGAGCTT+AGG - chr5_1:54823756-54823775 None:intergenic 35.0%
TAAGCTCTCTCAAATGGTAT+TGG + chr5_1:54823755-54823774 Msa0737570:intron 35.0%
CATTGTGAATTTCGCGTATA+CGG + chr5_1:54823897-54823916 Msa0737570:intron 35.0%
TAATCACATAGTTGTCGATC+TGG - chr5_1:54824139-54824158 None:intergenic 35.0%
TATAGGATTGCATTGGAGTA+TGG - chr5_1:54824287-54824306 None:intergenic 35.0%
!! CATAATATTGAGTTGAGCCT+AGG + chr5_1:54824460-54824479 Msa0737570:five_prime_UTR 35.0%
TCTTACGAAGAACTCAAAAC+AGG + chr5_1:54824561-54824580 Msa0737570:CDS 35.0%
CTTACGAAGAACTCAAAACA+GGG + chr5_1:54824562-54824581 Msa0737570:CDS 35.0%
ACTCAAAACAGGGAAACAAA+AGG + chr5_1:54824572-54824591 Msa0737570:CDS 35.0%
TTATAATCCTGTTTCCTCTC+GGG - chr5_1:54824636-54824655 None:intergenic 35.0%
CTTATAATCCTGTTTCCTCT+CGG - chr5_1:54824637-54824656 None:intergenic 35.0%
!! AAGAGAAGTGCTAAAGAGAA+GGG + chr5_1:54824708-54824727 Msa0737570:CDS 35.0%
TAAAGAGAAGGGTAGTCATT+TGG + chr5_1:54824719-54824738 Msa0737570:CDS 35.0%
CAAGATCTTAACAGTAAGGA+TGG + chr5_1:54824762-54824781 Msa0737570:CDS 35.0%
CCTTAAAACGACGACTAAAA+CGG - chr5_1:54824835-54824854 None:intergenic 35.0%
TGAGAAATTACTGTTTGTCC+TGG - chr5_1:54824991-54825010 None:intergenic 35.0%
TCAAGGATACCGATATAAGT+TGG + chr5_1:54825019-54825038 Msa0737570:CDS 35.0%
GCTTATGAAGAGCTCAAAAA+TGG + chr5_1:54825057-54825076 Msa0737570:CDS 35.0%
AAGAGCTCAAAAATGGAACT+CGG + chr5_1:54825064-54825083 Msa0737570:CDS 35.0%
! TGTTTTCTATTAGGGCAGTA+CGG - chr5_1:54825123-54825142 None:intergenic 35.0%
! ACTCCTAGAACATGCTTTTA+TGG + chr5_1:54825161-54825180 Msa0737570:CDS 35.0%
! CAACCATAAAAGCATGTTCT+AGG - chr5_1:54825167-54825186 None:intergenic 35.0%
! CTAGAACATGCTTTTATGGT+TGG + chr5_1:54825165-54825184 Msa0737570:CDS 35.0%
! AACATGCTTTTATGGTTGGT+CGG + chr5_1:54825169-54825188 Msa0737570:CDS 35.0%
ACATACAACCAACTTATTCG+AGG - chr5_1:54825763-54825782 None:intergenic 35.0%
!! TTTTTCATTTTCGGGCAGTA+TGG - chr5_1:54825856-54825875 None:intergenic 35.0%
!!! AGTCCGGTTTTTTCATTTTC+GGG - chr5_1:54825864-54825883 None:intergenic 35.0%
CATATGAACAGCTCAAAAAG+GGG + chr5_1:54826319-54826338 Msa0737570:CDS 35.0%
TAGAACTGACATTGAAAAGG+CGG + chr5_1:54826476-54826495 Msa0737570:CDS 35.0%
AAGGATCTTATAAATGTCGG+TGG + chr5_1:54826528-54826547 Msa0737570:CDS 35.0%
GAGTAGGTAATTGGAAAGAA+AGG - chr5_1:54826626-54826645 None:intergenic 35.0%
CAATGACACCCTTAACTATT+TGG + chr5_1:54826742-54826761 Msa0737570:intron 35.0%
TGAGTGAGAAATAAGTGGAA+TGG + chr5_1:54826768-54826787 Msa0737570:intron 35.0%
GAGTGAGAAATAAGTGGAAT+GGG + chr5_1:54826769-54826788 Msa0737570:intron 35.0%
ATCCTATACAGAACTCAAGA+AGG + chr5_1:54827090-54827109 Msa0737570:CDS 35.0%
TCCTATACAGAACTCAAGAA+GGG + chr5_1:54827091-54827110 Msa0737570:CDS 35.0%
GAACTCCTTAATCATGCTTT+AGG + chr5_1:54827193-54827212 Msa0737570:CDS 35.0%
ACTCCTTAATCATGCTTTAG+GGG + chr5_1:54827195-54827214 Msa0737570:CDS 35.0%
TTTCACTAAAGCTAGATGGT+TGG - chr5_1:54827263-54827282 None:intergenic 35.0%
GGATCTTATGACTATGAATG+TGG + chr5_1:54827294-54827313 Msa0737570:CDS 35.0%
! ATTCTGAAAGGCAGTTTGTA+TGG + chr5_1:54827413-54827432 Msa0737570:CDS 35.0%
TAAGGGATGAATACCGAATA+AGG + chr5_1:54827515-54827534 Msa0737570:CDS 35.0%
AAGGGATGAATACCGAATAA+GGG + chr5_1:54827516-54827535 Msa0737570:CDS 35.0%
! GTGGATTAAAACCCCTTATT+CGG - chr5_1:54827531-54827550 None:intergenic 35.0%
GCTAGGGTTATATAATGCAT+TGG + chr5_1:54827621-54827640 Msa0737570:CDS 35.0%
GCGTATGAATTAGATTGTCA+CGG + chr5_1:54827655-54827674 Msa0737570:CDS 35.0%
ACAAAGTGGACAACATAATC+GGG + chr5_1:54827749-54827768 Msa0737570:CDS 35.0%
CAATGAAATTACACTTCGCA+TGG + chr5_1:54827912-54827931 Msa0737570:CDS 35.0%
!! CACTTTCAGAGTGTTTTGAA+TGG + chr5_1:54828202-54828221 Msa0737570:CDS 35.0%
!! GTGTTTTGAATGGTCATGAA+AGG + chr5_1:54828212-54828231 Msa0737570:CDS 35.0%
AATTGAACTGGAAAAACGTG+AGG + chr5_1:54828282-54828301 Msa0737570:CDS 35.0%
GTTGGATGAAGAGATTAACA+AGG + chr5_1:54828330-54828349 Msa0737570:CDS 35.0%
CACTTTGATCTTCATTTCAC+AGG - chr5_1:54828410-54828429 None:intergenic 35.0%
!!! TTCCCTTTTTTCTCCAAACA+AGG + chr5_1:54828512-54828531 Msa0737570:intron 35.0%
! GATCCTTGTTTGGAGAAAAA+AGG - chr5_1:54828518-54828537 None:intergenic 35.0%
!! GTCTGGATTAGTTCTGTTTA+TGG + chr5_1:54828815-54828834 Msa0737570:intron 35.0%
AAACTGATCCGAACCATATT+CGG + chr5_1:54828874-54828893 Msa0737570:intron 35.0%
CAAGTTTACCGAATATGGTT+CGG - chr5_1:54828885-54828904 None:intergenic 35.0%
! TGGTTCAAGTTTACCGAATA+TGG - chr5_1:54828890-54828909 None:intergenic 35.0%
! CTGAACCAAAACTACCTTTT+CGG + chr5_1:54828988-54829007 Msa0737570:intron 35.0%
TTCGGTTTAACGGTTTGATT+CGG + chr5_1:54829016-54829035 Msa0737570:intron 35.0%
!!! TAACGGTTTGATTCGGTTTT+TGG + chr5_1:54829023-54829042 Msa0737570:intron 35.0%
TTGACTATCTGTTTATCCAG+CGG + chr5_1:54829096-54829115 Msa0737570:intron 35.0%
TTGGAGATTCAGCAACTAAA+AGG + chr5_1:54829188-54829207 Msa0737570:CDS 35.0%
ACTAAATGTCATGAAGCACA+TGG + chr5_1:54829214-54829233 Msa0737570:CDS 35.0%
GCTCTTTAATGATCAGAGTT+TGG - chr5_1:54829337-54829356 None:intergenic 35.0%
ACAACTTGGCATCTCTTTAA+TGG - chr5_1:54829494-54829513 None:intergenic 35.0%
CATTCTCTTCACACGAATAT+CGG - chr5_1:54829518-54829537 None:intergenic 35.0%
GATATTCGTGTGAAGAGAAT+GGG + chr5_1:54829517-54829536 Msa0737570:CDS 35.0%
ATATTCGTGTGAAGAGAATG+GGG + chr5_1:54829518-54829537 Msa0737570:CDS 35.0%
! TTTTAAATGGATGCCAGTCA+GGG - chr5_1:54829654-54829673 None:intergenic 35.0%
! ATTTTAAATGGATGCCAGTC+AGG - chr5_1:54829655-54829674 None:intergenic 35.0%
TTAATCTTGACGTACTTCAG+GGG - chr5_1:54829795-54829814 None:intergenic 35.0%
CATTAATCTTGACGTACTTC+AGG - chr5_1:54829797-54829816 None:intergenic 35.0%
GAGCAAATTGATCTACACAA+TGG + chr5_1:54829906-54829925 Msa0737570:intron 35.0%
! ATTCAAAGAAAGCACGAAGA+AGG - chr5_1:54830002-54830021 None:intergenic 35.0%
TCGTGCTTTCTTTGAATTTC+AGG + chr5_1:54830005-54830024 Msa0737570:intron 35.0%
AATGAACTGAGAAACGAGAT+GGG + chr5_1:54830057-54830076 Msa0737570:CDS 35.0%
ATGAATATAATCCAAGTGGG+CGG + chr5_1:54830124-54830143 Msa0737570:CDS 35.0%
GAATTATGGAATTACGCAGA+GGG + chr5_1:54830159-54830178 Msa0737570:CDS 35.0%
!!! TGCGAGTTTTATTAAAGCAG+TGG + chr5_1:54830208-54830227 Msa0737570:intron 35.0%
CACAACATTTAAGTCCTGTT+TGG + chr5_1:54830400-54830419 Msa0737570:intron 35.0%
AAGCTATCCTGAAAAGCTTA+TGG + chr5_1:54830555-54830574 Msa0737570:intron 35.0%
AGTCAATCCAAGCATATCTT+TGG + chr5_1:54830678-54830697 Msa0737570:intron 35.0%
CAAGTTAATCAATTAGGCAG+GGG - chr5_1:54830713-54830732 None:intergenic 35.0%
CGTCAAACTAAGGTTCAATT+TGG + chr5_1:54830874-54830893 Msa0737570:intron 35.0%
! ATCACACATTGTTTTCTCGA+AGG + chr5_1:54831005-54831024 Msa0737570:CDS 35.0%
! TCACACATTGTTTTCTCGAA+GGG + chr5_1:54831006-54831025 Msa0737570:CDS 35.0%
! TCGAACATTTTCTTTTGTGG+TGG + chr5_1:54831343-54831362 Msa0737570:three_prime_UTR 35.0%
! AGTAGAGACATAATTTGTGG+TGG + chr5_1:54831372-54831391 Msa0737570:three_prime_UTR 35.0%
TGTTGTATTCAGGCCCAATT+TGG + chr5_1:54823602-54823621 Msa0737570:intron 40.0%
GTTTCCTAAGCTCTCTCAAA+TGG + chr5_1:54823749-54823768 Msa0737570:intron 40.0%
GATGTGTACAGTCCACATTT+CGG + chr5_1:54824050-54824069 Msa0737570:intron 40.0%
GAATAACCAAAGCCGAAATG+TGG - chr5_1:54824065-54824084 None:intergenic 40.0%
! TTGTTTAGGTGCTACATCAC+AGG - chr5_1:54824406-54824425 None:intergenic 40.0%
TATCAAGGATACCGGTATAG+CGG + chr5_1:54824506-54824525 Msa0737570:CDS 40.0%
TATAATCCTGTTTCCTCTCG+GGG - chr5_1:54824635-54824654 None:intergenic 40.0%
!! GAAGAGAAGTGCTAAAGAGA+AGG + chr5_1:54824707-54824726 Msa0737570:CDS 40.0%
GGAGCAAGATCTTAACAGTA+AGG + chr5_1:54824758-54824777 Msa0737570:CDS 40.0%
GCATCGAGATCTATAGATCA+AGG + chr5_1:54824786-54824805 Msa0737570:CDS 40.0%
!! CCGTTTTAGTCGTCGTTTTA+AGG + chr5_1:54824832-54824851 Msa0737570:intron 40.0%
TATTTGCCTGGTAAATCAGC+AGG + chr5_1:54824911-54824930 Msa0737570:intron 40.0%
GTTACGAACACAATAAGTCC+AGG + chr5_1:54824970-54824989 Msa0737570:intron 40.0%
! AGGATACCGATATAAGTTGG+TGG + chr5_1:54825022-54825041 Msa0737570:CDS 40.0%
! GTTTTCTATTAGGGCAGTAC+GGG - chr5_1:54825122-54825141 None:intergenic 40.0%
GTACTGCCCTAATAGAAAAC+AGG + chr5_1:54825122-54825141 Msa0737570:CDS 40.0%
AAGGATATTACGAGTATGCC+TGG + chr5_1:54825258-54825277 Msa0737570:CDS 40.0%
! CCTTTATCAACAGGCTTTGA+CGG - chr5_1:54825285-54825304 None:intergenic 40.0%
TCAGGATCACCTTTATCAAC+AGG - chr5_1:54825294-54825313 None:intergenic 40.0%
TCTATTACTAGCGTGCAAAC+AGG - chr5_1:54825608-54825627 None:intergenic 40.0%
AAGTCAAGGACAAACTGTCA+CGG + chr5_1:54825702-54825721 Msa0737570:CDS 40.0%
CAAGTGATCCTCGAATAAGT+TGG + chr5_1:54825752-54825771 Msa0737570:CDS 40.0%
CAAAGTGAGAATCTCAGATG+AGG + chr5_1:54825819-54825838 Msa0737570:CDS 40.0%
CTGCCCGAAAATGAAAAAAC+CGG + chr5_1:54825858-54825877 Msa0737570:CDS 40.0%
AAAAACCGGACTATGTGTAC+AGG + chr5_1:54825872-54825891 Msa0737570:CDS 40.0%
AAAACCGGACTATGTGTACA+GGG + chr5_1:54825873-54825892 Msa0737570:CDS 40.0%
ATTTCCCTGTACACATAGTC+CGG - chr5_1:54825880-54825899 None:intergenic 40.0%
AAATCCTTGAACACGCTTCT+GGG + chr5_1:54825896-54825915 Msa0737570:CDS 40.0%
!! AAAGAGAGGTATCAGAGAGA+AGG + chr5_1:54825939-54825958 Msa0737570:CDS 40.0%
!! CCTTCAATCACAGGTTTTGA+TGG - chr5_1:54826021-54826040 None:intergenic 40.0%
CCATCAAAACCTGTGATTGA+AGG + chr5_1:54826018-54826037 Msa0737570:CDS 40.0%
GAAGAATCACCTTCAATCAC+AGG - chr5_1:54826030-54826049 None:intergenic 40.0%
GTGATTGAAGGTGATTCTTC+TGG + chr5_1:54826030-54826049 Msa0737570:CDS 40.0%
TTTGGTCAAAGTAACGTGCA+AGG + chr5_1:54826138-54826157 Msa0737570:intron 40.0%
! TTCTTCTCGGCTTTGTATCA+TGG - chr5_1:54826223-54826242 None:intergenic 40.0%
! GCAAGTGAAAGTCTTATCTG+AGG - chr5_1:54826361-54826380 None:intergenic 40.0%
TAAAACGGGATTACGTGTAC+AGG + chr5_1:54826406-54826425 Msa0737570:CDS 40.0%
AAAACGGGATTACGTGTACA+GGG + chr5_1:54826407-54826426 Msa0737570:CDS 40.0%
GAAATCCTTGAACATGCTTC+CGG + chr5_1:54826429-54826448 Msa0737570:CDS 40.0%
AAATCCTTGAACATGCTTCC+GGG + chr5_1:54826430-54826449 Msa0737570:CDS 40.0%
GAGATATCACCTTTCTTCGT+TGG - chr5_1:54826564-54826583 None:intergenic 40.0%
GATTAGAGGGAGTAGGTAAT+TGG - chr5_1:54826635-54826654 None:intergenic 40.0%
ACTCAGCGCCAAATAGTTAA+GGG - chr5_1:54826753-54826772 None:intergenic 40.0%
AGGGAATGATATGCAGACAT+TGG + chr5_1:54826880-54826899 Msa0737570:intron 40.0%
GGTGCCTGCAAAACAAAATA+AGG - chr5_1:54826975-54826994 None:intergenic 40.0%
TACTCCTCGGTTCAACATTA+TGG - chr5_1:54826996-54827015 None:intergenic 40.0%
TATTAGCATCCTTCTCAGAG+AGG - chr5_1:54827033-54827052 None:intergenic 40.0%
ACCCTTCTTGAGTTCTGTAT+AGG - chr5_1:54827095-54827114 None:intergenic 40.0%
!! ACTCAAGAAGGGTATTCACA+AGG + chr5_1:54827102-54827121 Msa0737570:CDS 40.0%
! CATTTTCTCTTGGGGCAATA+CGG - chr5_1:54827157-54827176 None:intergenic 40.0%
CTACCCCTAAAGCATGATTA+AGG - chr5_1:54827201-54827220 None:intergenic 40.0%
!! CTTAATCATGCTTTAGGGGT+AGG + chr5_1:54827199-54827218 Msa0737570:CDS 40.0%
! AAGGAGAAGTGTATTGGAGA+AGG + chr5_1:54827237-54827256 Msa0737570:CDS 40.0%
ACCAATACATCGTCCATCTT+CGG - chr5_1:54827479-54827498 None:intergenic 40.0%
TGAAAGTGGTTCCAAGCTAA+GGG + chr5_1:54827498-54827517 Msa0737570:CDS 40.0%
AGGGATGAATACCGAATAAG+GGG + chr5_1:54827517-54827536 Msa0737570:CDS 40.0%
!! TCCGAACTCTTTGGAATTCA+TGG + chr5_1:54827557-54827576 Msa0737570:CDS 40.0%
CCCATGAATTCCAAAGAGTT+CGG - chr5_1:54827561-54827580 None:intergenic 40.0%
!! CCGAACTCTTTGGAATTCAT+GGG + chr5_1:54827558-54827577 Msa0737570:CDS 40.0%
!! CGAACTCTTTGGAATTCATG+GGG + chr5_1:54827559-54827578 Msa0737570:CDS 40.0%
ATTGTCACGGTAAAAAGGAC+TGG + chr5_1:54827668-54827687 Msa0737570:CDS 40.0%
AAAAATCCGGTCTTTATGCG+TGG + chr5_1:54827707-54827726 Msa0737570:CDS 40.0%
AAAATCCGGTCTTTATGCGT+GGG + chr5_1:54827708-54827727 Msa0737570:CDS 40.0%
CAAAGTGGACAACATAATCG+GGG + chr5_1:54827750-54827769 Msa0737570:CDS 40.0%
! TGAAAGGCTTAAGTTGCAAC+TGG + chr5_1:54828228-54828247 Msa0737570:CDS 40.0%
TGAGTTGCGAAGAATTGAAC+TGG + chr5_1:54828270-54828289 Msa0737570:CDS 40.0%
AGGCACGTAATGAAAGTGAA+AGG + chr5_1:54828302-54828321 Msa0737570:CDS 40.0%
CTTTCTTCAAATGGCTGCTT+TGG + chr5_1:54828694-54828713 Msa0737570:CDS 40.0%
! TATACGGACCTTTTGATCTG+CGG - chr5_1:54828756-54828775 None:intergenic 40.0%
!! TTCTGTTTATGGTTCGGTTC+AGG + chr5_1:54828826-54828845 Msa0737570:intron 40.0%
AAACTTGAACCAAACCGTTG+AGG + chr5_1:54828898-54828917 Msa0737570:intron 40.0%
AACTTGAACCAAACCGTTGA+GGG + chr5_1:54828899-54828918 Msa0737570:intron 40.0%
CAGTTCAGCGTATACCAATT+GGG - chr5_1:54828936-54828955 None:intergenic 40.0%
TCAGTTCAGCGTATACCAAT+TGG - chr5_1:54828937-54828956 None:intergenic 40.0%
AGTCTTAGTCAGCATCAAAG+TGG + chr5_1:54829056-54829075 Msa0737570:intron 40.0%
TCAAAGTGGCAAGCTGATAA+TGG + chr5_1:54829070-54829089 Msa0737570:intron 40.0%
ATGAAGCACATGGAAGATGA+TGG + chr5_1:54829224-54829243 Msa0737570:CDS 40.0%
TAAGAGCAATGATGAACTGC+AGG + chr5_1:54829358-54829377 Msa0737570:CDS 40.0%
CCAAGAGTTTAAAAGATGCG+AGG - chr5_1:54829453-54829472 None:intergenic 40.0%
! CCTCGCATCTTTTAAACTCT+TGG + chr5_1:54829450-54829469 Msa0737570:intron 40.0%
CGATATTCGTGTGAAGAGAA+TGG + chr5_1:54829516-54829535 Msa0737570:CDS 40.0%
TATTCGTGTGAAGAGAATGG+GGG + chr5_1:54829519-54829538 Msa0737570:CDS 40.0%
TTCTGAACTGTGTTCGTTGT+GGG + chr5_1:54829612-54829631 Msa0737570:CDS 40.0%
TACAATCCAAGGGAAACATC+AGG + chr5_1:54829678-54829697 Msa0737570:CDS 40.0%
ATACAACCTGATGTTTCCCT+TGG - chr5_1:54829687-54829706 None:intergenic 40.0%
! CATGAGGTACGTCAAGTTTT+AGG - chr5_1:54829843-54829862 None:intergenic 40.0%
!!! CAAACTCGTGCTACTTGTTT+TGG + chr5_1:54829867-54829886 Msa0737570:intron 40.0%
CGAAGAAGGTAAGTTTCACT+AGG - chr5_1:54829988-54830007 None:intergenic 40.0%
GAATGAACTGAGAAACGAGA+TGG + chr5_1:54830056-54830075 Msa0737570:CDS 40.0%
CGAAGAAGTTTACAAAGCTG+TGG + chr5_1:54830080-54830099 Msa0737570:CDS 40.0%
AGAAGTTTACAAAGCTGTGG+TGG + chr5_1:54830083-54830102 Msa0737570:CDS 40.0%
GGTACATAACCTCGGAATTA+TGG + chr5_1:54830145-54830164 Msa0737570:CDS 40.0%
TGCGTAATTCCATAATTCCG+AGG - chr5_1:54830157-54830176 None:intergenic 40.0%
GGAATTATGGAATTACGCAG+AGG + chr5_1:54830158-54830177 Msa0737570:CDS 40.0%
! GAAGCCTGGTATGTTTCTAA+TGG + chr5_1:54830262-54830281 Msa0737570:intron 40.0%
!! GGACTATTTTGGAGAGCTAA+TGG - chr5_1:54830624-54830643 None:intergenic 40.0%
TCGTGCGGTTGAACATATTT+AGG + chr5_1:54831031-54831050 Msa0737570:CDS 40.0%
CTTGATACTTCAAGCTTCTG+TGG + chr5_1:54831078-54831097 Msa0737570:CDS 40.0%
AAGCATAAGCACAAAGCTTG+TGG - chr5_1:54831133-54831152 None:intergenic 40.0%
! AGAGACATAATTTGTGGTGG+TGG + chr5_1:54831375-54831394 Msa0737570:three_prime_UTR 40.0%
TACAGTCCACATTTCGGCTT+TGG + chr5_1:54824056-54824075 Msa0737570:intron 45.0%
TGAGCCTAGGAGAAACTCTA+TGG + chr5_1:54824473-54824492 Msa0737570:exon 45.0%
TGAGCCATAGAGTTTCTCCT+AGG - chr5_1:54824480-54824499 None:intergenic 45.0%
TATGGCTCACTGCTCTATCA+AGG + chr5_1:54824491-54824510 Msa0737570:exon 45.0%
CACTGCTCTATCAAGGATAC+CGG + chr5_1:54824498-54824517 Msa0737570:CDS 45.0%
GAGATACCACCAACTCAACT+GGG - chr5_1:54824535-54824554 None:intergenic 45.0%
GTACGGACAACTGAAACTCT+CGG - chr5_1:54824610-54824629 None:intergenic 45.0%
! GAAGGGTAGTCATTTGGCTT+TGG + chr5_1:54824725-54824744 Msa0737570:CDS 45.0%
!! TGTTGTCCTGCTGATTTACC+AGG - chr5_1:54824920-54824939 None:intergenic 45.0%
CGGAATGTGAAAACCTCAGA+CGG + chr5_1:54825084-54825103 Msa0737570:CDS 45.0%
GGAATGTGAAAACCTCAGAC+GGG + chr5_1:54825085-54825104 Msa0737570:CDS 45.0%
! CCGTCAAAGCCTGTTGATAA+AGG + chr5_1:54825282-54825301 Msa0737570:CDS 45.0%
ATATCGCAAACAGCAGGATC+AGG - chr5_1:54825312-54825331 None:intergenic 45.0%
TGTGGTATATCGCAAACAGC+AGG - chr5_1:54825318-54825337 None:intergenic 45.0%
CCAGTATCCTTGTTAGAGCA+TGG - chr5_1:54825730-54825749 None:intergenic 45.0%
CCATGCTCTAACAAGGATAC+TGG + chr5_1:54825727-54825746 Msa0737570:CDS 45.0%
GAAATCCTTGAACACGCTTC+TGG + chr5_1:54825895-54825914 Msa0737570:CDS 45.0%
AATCCTTGAACACGCTTCTG+GGG + chr5_1:54825897-54825916 Msa0737570:CDS 45.0%
CAGAGTAGTTCGCAAAAGAG+AGG + chr5_1:54825925-54825944 Msa0737570:CDS 45.0%
!! ATCACAGGTTTTGATGGAGC+AGG - chr5_1:54826015-54826034 None:intergenic 45.0%
! GAGTCGTCGCATTTTCTTCT+CGG - chr5_1:54826236-54826255 None:intergenic 45.0%
AATCCTTGAACATGCTTCCG+GGG + chr5_1:54826431-54826450 Msa0737570:CDS 45.0%
CATTGAAAAGGCGGATCATC+TGG + chr5_1:54826485-54826504 Msa0737570:CDS 45.0%
!! CCTTTCTTCGTTGGTTCTGA+AGG - chr5_1:54826555-54826574 None:intergenic 45.0%
CCTTCAGAACCAACGAAGAA+AGG + chr5_1:54826552-54826571 Msa0737570:CDS 45.0%
CACTCAGCGCCAAATAGTTA+AGG - chr5_1:54826754-54826773 None:intergenic 45.0%
AACCGAGGAGTAACTGTAAC+AGG + chr5_1:54827004-54827023 Msa0737570:CDS 45.0%
GACCTGTTACAGTTACTCCT+CGG - chr5_1:54827009-54827028 None:intergenic 45.0%
TAGGTCAAAGTGACGCACAA+AGG + chr5_1:54827218-54827237 Msa0737570:CDS 45.0%
! CGCACAAAGGAGAAGTGTAT+TGG + chr5_1:54827231-54827250 Msa0737570:CDS 45.0%
AAAGGCAGTTTGTATGGCCA+TGG + chr5_1:54827419-54827438 Msa0737570:CDS 45.0%
AGTTTGTATGGCCATGGACT+GGG + chr5_1:54827425-54827444 Msa0737570:CDS 45.0%
TTAACCACAATCCCAGTCCA+TGG - chr5_1:54827439-54827458 None:intergenic 45.0%
TACATCGTCCATCTTCGGTT+TGG - chr5_1:54827474-54827493 None:intergenic 45.0%
ACCGAAGATGGACGATGTAT+TGG + chr5_1:54827475-54827494 Msa0737570:CDS 45.0%
! GGACGATGTATTGGTGAAAG+TGG + chr5_1:54827484-54827503 Msa0737570:CDS 45.0%
GTGAAAGTGGTTCCAAGCTA+AGG + chr5_1:54827497-54827516 Msa0737570:CDS 45.0%
TCGGTATTCATCCCTTAGCT+TGG - chr5_1:54827512-54827531 None:intergenic 45.0%
AAATTCCACAACTGCAGCTC+CGG - chr5_1:54827590-54827609 None:intergenic 45.0%
CACTTTGTAGTCATCAGCTC+GGG - chr5_1:54827737-54827756 None:intergenic 45.0%
CCACTTTGTAGTCATCAGCT+CGG - chr5_1:54827738-54827757 None:intergenic 45.0%
GCATCTTGCTCCATGATTTC+AGG - chr5_1:54827808-54827827 None:intergenic 45.0%
TCATGGAGCAAGATGCTAGA+AGG + chr5_1:54827812-54827831 Msa0737570:CDS 45.0%
ACTTCGCATGGACATTGTGA+TGG + chr5_1:54827924-54827943 Msa0737570:CDS 45.0%
CTTCGCATGGACATTGTGAT+GGG + chr5_1:54827925-54827944 Msa0737570:CDS 45.0%
CTTGCTCAATCTCACAGTCA+AGG + chr5_1:54827961-54827980 Msa0737570:CDS 45.0%
!! GCTTTGGAGCAACAAAAAGC+TGG + chr5_1:54828710-54828729 Msa0737570:CDS 45.0%
GAAACTTGCCGCAGATCAAA+AGG + chr5_1:54828745-54828764 Msa0737570:CDS 45.0%
!! GTTTATGGTTCGGTTCAGGA+AGG + chr5_1:54828830-54828849 Msa0737570:intron 45.0%
AAGGAAAACCGAACCGCATT+CGG + chr5_1:54828849-54828868 Msa0737570:intron 45.0%
! CAGTTTTACCGAATGCGGTT+CGG - chr5_1:54828860-54828879 None:intergenic 45.0%
! CGGATCAGTTTTACCGAATG+CGG - chr5_1:54828865-54828884 None:intergenic 45.0%
TTGGTTCAGAACCACTGAAC+TGG - chr5_1:54828977-54828996 None:intergenic 45.0%
!! CAAGCTGGATGATTTTGGCA+TGG - chr5_1:54829136-54829155 None:intergenic 45.0%
ACACGAATATCGGCACAACT+TGG - chr5_1:54829508-54829527 None:intergenic 45.0%
CTTCTGAACTGTGTTCGTTG+TGG + chr5_1:54829611-54829630 Msa0737570:CDS 45.0%
AGCACGAGTTTGACAACATG+AGG - chr5_1:54829859-54829878 None:intergenic 45.0%
AAGAGAGCGACTTTGCAAGA+AGG + chr5_1:54830183-54830202 Msa0737570:CDS 45.0%
AAGGGGAATGATATGAAGCC+TGG + chr5_1:54830248-54830267 Msa0737570:intron 45.0%
CTGTGGATCATGTTCCTGAA+AGG + chr5_1:54830961-54830980 Msa0737570:intron 45.0%
GGATCATGTTCCTGAAAGGT+TGG + chr5_1:54830965-54830984 Msa0737570:intron 45.0%
!! TGTTCCTGAAAGGTTGGTGT+TGG + chr5_1:54830971-54830990 Msa0737570:intron 45.0%
! TTTTCTCGAAGGGAATCGTG+CGG + chr5_1:54831016-54831035 Msa0737570:CDS 45.0%
GATACTTCAAGCTTCTGTGG+AGG + chr5_1:54831081-54831100 Msa0737570:CDS 45.0%
!! AAATAAAAAGTTTAAATTAA+GGG - chr5_1:54825481-54825500 None:intergenic 5.0%
!! AAAATAAAAAGTTTAAATTA+AGG - chr5_1:54825482-54825501 None:intergenic 5.0%
CAACTGGGATTCCGCTATAC+CGG - chr5_1:54824520-54824539 None:intergenic 50.0%
TAGCGGAATCCCAGTTGAGT+TGG + chr5_1:54824523-54824542 Msa0737570:CDS 50.0%
CGAGATACCACCAACTCAAC+TGG - chr5_1:54824536-54824555 None:intergenic 50.0%
GAACTCCTGAATCATGCCAC+CGG + chr5_1:54824663-54824682 Msa0737570:CDS 50.0%
AACTCCTGAATCATGCCACC+GGG + chr5_1:54824664-54824683 Msa0737570:CDS 50.0%
TGAACTACTCCGACCAATCC+CGG - chr5_1:54824685-54824704 None:intergenic 50.0%
GCATATGAAAGTCCCGTCTG+AGG - chr5_1:54825100-54825119 None:intergenic 50.0%
CAGAGAGAAGGCAACTCATC+TGG + chr5_1:54825951-54825970 Msa0737570:CDS 50.0%
! AAAGGCGGATCATCTGGCTT+TGG + chr5_1:54826491-54826510 Msa0737570:CDS 50.0%
! GGCGCTGAGTGAGAAATAAG+TGG + chr5_1:54826763-54826782 Msa0737570:intron 50.0%
GGCACCATAATGTTGAACCG+AGG + chr5_1:54826989-54827008 Msa0737570:intron 50.0%
! AACAGGTCACCTCTCTGAGA+AGG + chr5_1:54827021-54827040 Msa0737570:CDS 50.0%
CAGTTTGTATGGCCATGGAC+TGG + chr5_1:54827424-54827443 Msa0737570:CDS 50.0%
!! CCATCTTCGGTTTGGCTAGT+GGG - chr5_1:54827466-54827485 None:intergenic 50.0%
!! TCCATCTTCGGTTTGGCTAG+TGG - chr5_1:54827467-54827486 None:intergenic 50.0%
CAAAGAGTTCGGACTCTACG+TGG - chr5_1:54827550-54827569 None:intergenic 50.0%
CACGTAGAGTCCGAACTCTT+TGG + chr5_1:54827548-54827567 Msa0737570:CDS 50.0%
TGGAATTCATGGGGTCACAC+CGG + chr5_1:54827568-54827587 Msa0737570:CDS 50.0%
CCGAGCTGATGACTACAAAG+TGG + chr5_1:54827735-54827754 Msa0737570:CDS 50.0%
CGGGGAGCAACTACAAAAGA+TGG + chr5_1:54827768-54827787 Msa0737570:CDS 50.0%
TCCAAACAAGGATCTTGCCG+AGG + chr5_1:54828524-54828543 Msa0737570:intron 50.0%
TCCTCGGCAAGATCCTTGTT+TGG - chr5_1:54828528-54828547 None:intergenic 50.0%
AAACCGTTGAGGGTTTCTCC+CGG + chr5_1:54828909-54828928 Msa0737570:intron 50.0%
AGCGTATACCAATTGGGTCC+GGG - chr5_1:54828930-54828949 None:intergenic 50.0%
CAGCGTATACCAATTGGGTC+CGG - chr5_1:54828931-54828950 None:intergenic 50.0%
! CCACGCCGAAAAGGTAGTTT+TGG - chr5_1:54828996-54829015 None:intergenic 50.0%
! CCAAAACTACCTTTTCGGCG+TGG + chr5_1:54828993-54829012 Msa0737570:intron 50.0%
! ACTACCTTTTCGGCGTGGTT+CGG + chr5_1:54828998-54829017 Msa0737570:intron 50.0%
TAAACCGAACCACGCCGAAA+AGG - chr5_1:54829005-54829024 None:intergenic 50.0%
!! TTCGGCGTGGTTCGGTTTAA+CGG + chr5_1:54829006-54829025 Msa0737570:intron 50.0%
! GGAGTTGTTCTTTTTGCCGC+TGG - chr5_1:54829115-54829134 None:intergenic 50.0%
GGAACAGTCACTTCGAGACA+TGG + chr5_1:54829301-54829320 Msa0737570:CDS 50.0%
TGAACTGCAGGAAGCTCGAA+AGG + chr5_1:54829370-54829389 Msa0737570:CDS 50.0%
!! GTTGTGGGAAGAGTACCTGA+AGG + chr5_1:54829627-54829646 Msa0737570:CDS 50.0%
AAGTGGGCGGTACATAACCT+CGG + chr5_1:54830137-54830156 Msa0737570:CDS 50.0%
!! CGGAATCCCAGTTGAGTTGG+TGG + chr5_1:54824526-54824545 Msa0737570:CDS 55.0%
ACAACTGAAACTCTCGGCCG+AGG - chr5_1:54824604-54824623 None:intergenic 55.0%
TGTTTCCTCTCGGGGCAGTA+CGG - chr5_1:54824627-54824646 None:intergenic 55.0%
CAATCCCGGTGGCATGATTC+AGG - chr5_1:54824671-54824690 None:intergenic 55.0%
CTGAATCATGCCACCGGGAT+TGG + chr5_1:54824669-54824688 Msa0737570:CDS 55.0%
! ATCATGCCACCGGGATTGGT+CGG + chr5_1:54824673-54824692 Msa0737570:CDS 55.0%
! TCAACAGGCTTTGACGGTCC+AGG - chr5_1:54825279-54825298 None:intergenic 55.0%
CACGGCTCCATGCTCTAACA+AGG + chr5_1:54825720-54825739 Msa0737570:CDS 55.0%
!! CTTGAACACGCTTCTGGGGT+CGG + chr5_1:54825901-54825920 Msa0737570:CDS 55.0%
CTTGAACATGCTTCCGGGGT+GGG + chr5_1:54826435-54826454 Msa0737570:CDS 55.0%
TGAGATACTCCAACCCACCC+CGG - chr5_1:54826451-54826470 None:intergenic 55.0%
!! ATGGCCATGGACTGGGATTG+TGG + chr5_1:54827432-54827451 Msa0737570:CDS 55.0%
CCCACTAGCCAAACCGAAGA+TGG + chr5_1:54827463-54827482 Msa0737570:CDS 55.0%
GGCAACCCACGCATAAAGAC+CGG - chr5_1:54827716-54827735 None:intergenic 55.0%
GGGAGAAACCCTCAACGGTT+TGG - chr5_1:54828910-54828929 None:intergenic 55.0%
AGTACCTGAAGGACCCTGAC+TGG + chr5_1:54829638-54829657 Msa0737570:CDS 55.0%
GAGGTTATGTACCGCCCACT+TGG - chr5_1:54830138-54830157 None:intergenic 55.0%
GCAGCCAACACCAACCTTTC+AGG - chr5_1:54830978-54830997 None:intergenic 55.0%
!! GAAAGGTTGGTGTTGGCTGC+AGG + chr5_1:54830978-54830997 Msa0737570:intron 55.0%
GTACTGCCCCGAGAGGAAAC+AGG + chr5_1:54824626-54824645 Msa0737570:CDS 60.0%
ACTACTCCGACCAATCCCGG+TGG - chr5_1:54824682-54824701 None:intergenic 60.0%
! CGACCCCAGAAGCGTGTTCA+AGG - chr5_1:54825903-54825922 None:intergenic 60.0%
! CCACCCCGGAAGCATGTTCA+AGG - chr5_1:54826437-54826456 None:intergenic 60.0%
CCTTGAACATGCTTCCGGGG+TGG + chr5_1:54826434-54826453 Msa0737570:CDS 60.0%
AACATGCTTCCGGGGTGGGT+TGG + chr5_1:54826439-54826458 Msa0737570:CDS 60.0%
TCACACCGGAGCTGCAGTTG+TGG + chr5_1:54827582-54827601 Msa0737570:CDS 60.0%
GGTCCGGGAGAAACCCTCAA+CGG - chr5_1:54828915-54828934 None:intergenic 60.0%
GGGTTTCTCCCGGACCCAAT+TGG + chr5_1:54828919-54828938 Msa0737570:intron 60.0%
GATGCCAGTCAGGGTCCTTC+AGG - chr5_1:54829645-54829664 None:intergenic 60.0%
GTTGTCCGTACTGCCCCGAG+AGG + chr5_1:54824619-54824638 Msa0737570:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 54823087 54831447 54823087 ID=Msa0737570;Name=Msa0737570
chr5_1 mRNA 54823087 54831447 54823087 ID=Msa0737570-mRNA-1;Parent=Msa0737570;Name=Msa0737570-mRNA-1;_AED=0.06;_eAED=0.06;_QI=176|0.81|0.83|1|0.90|0.83|12|268|1180
chr5_1 exon 54823087 54823226 54823087 ID=Msa0737570-mRNA-1:exon:15413;Parent=Msa0737570-mRNA-1
chr5_1 exon 54824456 54824807 54824456 ID=Msa0737570-mRNA-1:exon:15414;Parent=Msa0737570-mRNA-1
chr5_1 exon 54824971 54825354 54824971 ID=Msa0737570-mRNA-1:exon:15415;Parent=Msa0737570-mRNA-1
chr5_1 exon 54825689 54826051 54825689 ID=Msa0737570-mRNA-1:exon:15416;Parent=Msa0737570-mRNA-1
chr5_1 exon 54826217 54826573 54826217 ID=Msa0737570-mRNA-1:exon:15417;Parent=Msa0737570-mRNA-1
chr5_1 exon 54826990 54827982 54826990 ID=Msa0737570-mRNA-1:exon:15418;Parent=Msa0737570-mRNA-1
chr5_1 exon 54828170 54828351 54828170 ID=Msa0737570-mRNA-1:exon:15419;Parent=Msa0737570-mRNA-1
chr5_1 exon 54828677 54828766 54828677 ID=Msa0737570-mRNA-1:exon:15420;Parent=Msa0737570-mRNA-1
chr5_1 exon 54829116 54829403 54829116 ID=Msa0737570-mRNA-1:exon:15421;Parent=Msa0737570-mRNA-1
chr5_1 exon 54829490 54829699 54829490 ID=Msa0737570-mRNA-1:exon:15422;Parent=Msa0737570-mRNA-1
chr5_1 exon 54830027 54830206 54830027 ID=Msa0737570-mRNA-1:exon:15423;Parent=Msa0737570-mRNA-1
chr5_1 exon 54831000 54831447 54831000 ID=Msa0737570-mRNA-1:exon:15424;Parent=Msa0737570-mRNA-1
chr5_1 five_prime_UTR 54823087 54823226 54823087 ID=Msa0737570-mRNA-1:five_prime_utr;Parent=Msa0737570-mRNA-1
chr5_1 five_prime_UTR 54824456 54824491 54824456 ID=Msa0737570-mRNA-1:five_prime_utr;Parent=Msa0737570-mRNA-1
chr5_1 CDS 54824492 54824807 54824492 ID=Msa0737570-mRNA-1:cds;Parent=Msa0737570-mRNA-1
chr5_1 CDS 54824971 54825354 54824971 ID=Msa0737570-mRNA-1:cds;Parent=Msa0737570-mRNA-1
chr5_1 CDS 54825689 54826051 54825689 ID=Msa0737570-mRNA-1:cds;Parent=Msa0737570-mRNA-1
chr5_1 CDS 54826217 54826573 54826217 ID=Msa0737570-mRNA-1:cds;Parent=Msa0737570-mRNA-1
chr5_1 CDS 54826990 54827982 54826990 ID=Msa0737570-mRNA-1:cds;Parent=Msa0737570-mRNA-1
chr5_1 CDS 54828170 54828351 54828170 ID=Msa0737570-mRNA-1:cds;Parent=Msa0737570-mRNA-1
chr5_1 CDS 54828677 54828766 54828677 ID=Msa0737570-mRNA-1:cds;Parent=Msa0737570-mRNA-1
chr5_1 CDS 54829116 54829403 54829116 ID=Msa0737570-mRNA-1:cds;Parent=Msa0737570-mRNA-1
chr5_1 CDS 54829490 54829699 54829490 ID=Msa0737570-mRNA-1:cds;Parent=Msa0737570-mRNA-1
chr5_1 CDS 54830027 54830206 54830027 ID=Msa0737570-mRNA-1:cds;Parent=Msa0737570-mRNA-1
chr5_1 CDS 54831000 54831179 54831000 ID=Msa0737570-mRNA-1:cds;Parent=Msa0737570-mRNA-1
chr5_1 three_prime_UTR 54831180 54831447 54831180 ID=Msa0737570-mRNA-1:three_prime_utr;Parent=Msa0737570-mRNA-1
Gene Sequence

>Msa0737570

ATGGCTCACTGCTCTATCAAGGATACCGGTATAGCGGAATCCCAGTTGAGTTGGTGGTATCTCGTATCATCTTACGAAGAACTCAAAACAGGGAAACAAAAGGTAAAAACCTCGGCCGAGAGTTTCAGTTGTCCGTACTGCCCCGAGAGGAAACAGGATTATAAGTTAAATGAACTCCTGAATCATGCCACCGGGATTGGTCGGAGTAGTTCAGAGAAGAGAAGTGCTAAAGAGAAGGGTAGTCATTTGGCTTTGGTAAAATATTTGGAGCAAGATCTTAACAGTAAGGATGGTGCATCGAGATCTATAGATCAAGTTACGAACACAATAAGTCCAGGACAAACAGTAATTTCTCACTGTTCTATCAAGGATACCGATATAAGTTGGTGGTATGTAGATACAGCTTATGAAGAGCTCAAAAATGGAACTCGGAATGTGAAAACCTCAGACGGGACTTTCATATGCCCGTACTGCCCTAATAGAAAACAGGATTATTTGTACAGGGAACTCCTAGAACATGCTTTTATGGTTGGTCGGAGTAGTTCAGATAAGAGAAGTGCAAGAGAAAGAGCTAATCATCTTGCTTTGTTGAAATATTTGGAAAAGGATATTACGAGTATGCCTGGACCGTCAAAGCCTGTTGATAAAGGTGATCCTGATCCTGCTGTTTGCGATATACCACAGAAATTTTTTCGTTCTAGTACAAAATTGATAAGTCAAGGACAAACTGTCACGGCTCCATGCTCTAACAAGGATACTGGTTCAAGTGATCCTCGAATAAGTTGGTTGTATGTAGATAAATTTTATCAAGAACTCAAGAATGGAAGTCTCAAAGTGAGAATCTCAGATGAGGCTTTCACTTGTCCATACTGCCCGAAAATGAAAAAACCGGACTATGTGTACAGGGAAATCCTTGAACACGCTTCTGGGGTCGGTCAGAGTAGTTCGCAAAAGAGAGGTATCAGAGAGAAGGCAACTCATCTGGCTTTAATGAAATATTTGAAACAGGATATTATATATGTGCCTGCTCCATCAAAACCTGTGATTGAAGGTGATTCTTCTGGAGCCATGATACAAAGCCGAGAAGAAAATGCGACGACTCGCTGCTCCGACAAAGATTCTGATAAAAGTGCATCTCAAATAAATTTAGGGCAATTAAAAAGAACATATGAACAGCTCAAAAAGGGGATTCAAAACGTGAGAACCTCAGATAAGACTTTCACTTGCCCATACTGCCCTAATAATAAAAGGATAAAACGGGATTACGTGTACAGGGAAATCCTTGAACATGCTTCCGGGGTGGGTTGGAGTATCTCACAAACTAGAACTGACATTGAAAAGGCGGATCATCTGGCTTTGGTCAAATATTTGAAAAAGGATCTTATAAATGTCGGTGGTCCTTCAGAACCAACGAAGAAAGGCACCATAATGTTGAACCGAGGAGTAACTGTAACAGGTCACCTCTCTGAGAAGGATGCTAATAATAGCGCATCTCAAATAAATGCGTTGTTTGTAAATAAATCCTATACAGAACTCAAGAAGGGTATTCACAAGGTCAAAACATCAGAAGATACTTTCTCATGTCCGTATTGCCCCAAGAGAAAATGCAATTATAGGTACAGCGAACTCCTTAATCATGCTTTAGGGGTAGGTCAAAGTGACGCACAAAGGAGAAGTGTATTGGAGAAGGCCAACCATCTAGCTTTAGTGAAATATTTGGAAAAGGATCTTATGACTATGAATGTGGAACGTCCGTTAAAGCCTGCAAATAAATATTTGGAAAACAATCTTATGAATGTGGAACAAAATCGAACAAAACCAGTGAATGAAAACATTCTTGTCAATTCTGAAAGGCAGTTTGTATGGCCATGGACTGGGATTGTGGTTAATATTCCCACTAGCCAAACCGAAGATGGACGATGTATTGGTGAAAGTGGTTCCAAGCTAAGGGATGAATACCGAATAAGGGGTTTTAATCCACGTAGAGTCCGAACTCTTTGGAATTCATGGGGTCACACCGGAGCTGCAGTTGTGGAATTTAATAAAAGTTGGCTAGGGTTATATAATGCATTGGCATTTGAAAGGGCGTATGAATTAGATTGTCACGGTAAAAAGGACTGGCTTTCTTATACTGAACAAAAATCCGGTCTTTATGCGTGGGTTGCCCGAGCTGATGACTACAAAGTGGACAACATAATCGGGGAGCAACTACAAAAGATGGATGTTAAAACAATACCTGAAATCATGGAGCAAGATGCTAGAAGGTTCAATAGACTCGTGCAGAGTATGCATAACATTCTTCAAGTAAAGAACAACAAGATAAAAGAAATGGAAGTAGTATGCAATGAAATTACACTTCGCATGGACATTGTGATGGGCGAAATAGACAGACTTGCTCAATCTCACAGTCAAGAGATGAAGAAAATACAGTCAAGTGCAAATCAACACTTTCAGAGTGTTTTGAATGGTCATGAAAGGCTTAAGTTGCAACTGGAATCTCAGAAAAGAGAACTTGAGTTGCGAAGAATTGAACTGGAAAAACGTGAGGCACGTAATGAAAGTGAAAGGAAAAAGTTGGATGAAGAGATTAACAAGACTGCAACGAAAAATCACTTTCTTCAAATGGCTGCTTTGGAGCAACAAAAAGCTGGTGAAAATGTTTTGAAACTTGCCGCAGATCAAAAGCGGCAAAAAGAACAACTCCATGCCAAAATCATCCAGCTTGAAAAACAACTAAATGTGAAACAAAAACTGGAATTGGAGATTCAGCAACTAAAAGGAAAACTAAATGTCATGAAGCACATGGAAGATGATGGAGAACTTGATGTTCTGAATATGATGGATGCCTTACATATAGATTTAAGAGAGAAGGAACAGTCACTTCGAGACATGGACGCATTGAACCAAACTCTGATCATTAAAGAGCGTAAGAGCAATGATGAACTGCAGGAAGCTCGAAAGGAATTGATTACTACCATTAAAGAGATGCCAAGTTGTGCCGATATTCGTGTGAAGAGAATGGGGGAGCTAGACTTTAGACCATTTCTAGAAGCTATGAAGAAAAAATATAATGAAGATGTTGCAGAAGATAGAGCTTCTGAACTGTGTTCGTTGTGGGAAGAGTACCTGAAGGACCCTGACTGGCATCCATTTAAAATTTCTACAATCCAAGGGAAACATCAGGAAGCTATAGACGATGAAGATGAAAAGCTGAATGAACTGAGAAACGAGATGGGCGAAGAAGTTTACAAAGCTGTGGTGGCAGCATTGAAAGAGATAAATGAATATAATCCAAGTGGGCGGTACATAACCTCGGAATTATGGAATTACGCAGAGGGAAAGAGAGCGACTTTGCAAGAAGGAGAATCATCACACATTGTTTTCTCGAAGGGAATCGTGCGGTTGAACATATTTAGGAAATACATCATATATTTGGCTTCACTTGATACTTCAAGCTTCTGTGGAGGTCTTTCTATCGTCACTGCTTTCATAACCACAAGCTTTGTGCTTATGCTTATTCATTTAGGTGGAGTTCGAAGTTAA
Protein sequence

>Msa0737570

MAHCSIKDTGIAESQLSWWYLVSSYEELKTGKQKVKTSAESFSCPYCPERKQDYKLNELLNHATGIGRSSSEKRSAKEKGSHLALVKYLEQDLNSKDGASRSIDQVTNTISPGQTVISHCSIKDTDISWWYVDTAYEELKNGTRNVKTSDGTFICPYCPNRKQDYLYRELLEHAFMVGRSSSDKRSARERANHLALLKYLEKDITSMPGPSKPVDKGDPDPAVCDIPQKFFRSSTKLISQGQTVTAPCSNKDTGSSDPRISWLYVDKFYQELKNGSLKVRISDEAFTCPYCPKMKKPDYVYREILEHASGVGQSSSQKRGIREKATHLALMKYLKQDIIYVPAPSKPVIEGDSSGAMIQSREENATTRCSDKDSDKSASQINLGQLKRTYEQLKKGIQNVRTSDKTFTCPYCPNNKRIKRDYVYREILEHASGVGWSISQTRTDIEKADHLALVKYLKKDLINVGGPSEPTKKGTIMLNRGVTVTGHLSEKDANNSASQINALFVNKSYTELKKGIHKVKTSEDTFSCPYCPKRKCNYRYSELLNHALGVGQSDAQRRSVLEKANHLALVKYLEKDLMTMNVERPLKPANKYLENNLMNVEQNRTKPVNENILVNSERQFVWPWTGIVVNIPTSQTEDGRCIGESGSKLRDEYRIRGFNPRRVRTLWNSWGHTGAAVVEFNKSWLGLYNALAFERAYELDCHGKKDWLSYTEQKSGLYAWVARADDYKVDNIIGEQLQKMDVKTIPEIMEQDARRFNRLVQSMHNILQVKNNKIKEMEVVCNEITLRMDIVMGEIDRLAQSHSQEMKKIQSSANQHFQSVLNGHERLKLQLESQKRELELRRIELEKREARNESERKKLDEEINKTATKNHFLQMAALEQQKAGENVLKLAADQKRQKEQLHAKIIQLEKQLNVKQKLELEIQQLKGKLNVMKHMEDDGELDVLNMMDALHIDLREKEQSLRDMDALNQTLIIKERKSNDELQEARKELITTIKEMPSCADIRVKRMGELDFRPFLEAMKKKYNEDVAEDRASELCSLWEEYLKDPDWHPFKISTIQGKHQEAIDDEDEKLNELRNEMGEEVYKAVVAALKEINEYNPSGRYITSELWNYAEGKRATLQEGESSHIVFSKGIVRLNIFRKYIIYLASLDTSSFCGGLSIVTAFITTSFVLMLIHLGGVRS*