Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899120 | XP_003620535.2 | 90.513 | 390 | 26 | 2 | 1 | 383 | 1 | 386 | 0.0 | 704 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899120 | sp|Q8VXZ0|NUD20_ARATH | 58.090 | 377 | 146 | 5 | 11 | 383 | 6 | 374 | 1.22e-146 | 423 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0097470 | Msa0899120 | 0.852179 | 5.470153e-61 | -8.615850e-47 |
| Msa0671300 | Msa0899120 | 0.820637 | 6.173456e-53 | -8.615850e-47 |
| Msa0186400 | Msa0899120 | 0.803213 | 3.881050e-49 | -8.615850e-47 |
| Msa0237650 | Msa0899120 | 0.807642 | 4.574688e-50 | -8.615850e-47 |
| Msa0569580 | Msa0899120 | 0.800562 | 1.359682e-48 | -8.615850e-47 |
| Msa0899120 | Msa0995000 | 0.801386 | 9.228455e-49 | -8.615850e-47 |
| Msa0899120 | Msa1267390 | 0.806218 | 9.153941e-50 | -8.615850e-47 |
| Msa0899120 | Msa1357090 | 0.829655 | 4.558928e-55 | -8.615850e-47 |
| Msa0899120 | Msa1401640 | 0.818280 | 2.129037e-52 | -8.615850e-47 |
| Msa0899120 | Msa1411930 | 0.802101 | 6.581289e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899120 | MtrunA17_Chr6g0485011 | 90.513 | 390 | 26 | 2 | 1 | 383 | 1 | 386 | 0.0 | 704 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899120 | AT5G19460.1 | 58.090 | 377 | 146 | 5 | 11 | 383 | 6 | 374 | 1.24e-147 | 423 |
| Msa0899120 | AT5G19470.1 | 60.815 | 319 | 117 | 3 | 66 | 383 | 54 | 365 | 5.27e-135 | 390 |
| Msa0899120 | AT5G19470.2 | 60.403 | 298 | 110 | 3 | 66 | 362 | 54 | 344 | 1.05e-124 | 364 |
Find 100 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTGAAAATTATGGATATT+TGG | 0.161860 | 6_1:-93937133 | Msa0899120:CDS |
| GGTTGCAAAGTTGGACTTTA+TGG | 0.172663 | 6_1:+93944438 | None:intergenic |
| CGTGCTGCAGCTCCTTATTT+TGG | 0.177594 | 6_1:-93940298 | Msa0899120:CDS |
| TCAATATTATCTTTAATTCT+TGG | 0.201451 | 6_1:-93936954 | Msa0899120:three_prime_UTR |
| CTCTTTGAAGCATAGGCTTA+TGG | 0.222290 | 6_1:-93938749 | Msa0899120:intron |
| CTCCTATTCTTAAGCTTCTT+AGG | 0.225839 | 6_1:+93937106 | None:intergenic |
| ATTTCTGCAACTTGCTTAAC+AGG | 0.232793 | 6_1:+93937703 | None:intergenic |
| TGTACCTTTATGCCAAAATA+AGG | 0.246886 | 6_1:+93940286 | None:intergenic |
| TCCAGCATTGTTGTCTTTAT+CGG | 0.247157 | 6_1:-93936922 | Msa0899120:three_prime_UTR |
| TGGCAAGCTATATAATAAAA+AGG | 0.273689 | 6_1:-93936981 | Msa0899120:three_prime_UTR |
| TGTTGGCGCTGTTTCATATA+TGG | 0.277222 | 6_1:-93937938 | Msa0899120:CDS |
| TACATAAGTCCTGAAAATTA+TGG | 0.313397 | 6_1:-93937141 | Msa0899120:CDS |
| TGGCTATGTAATCGAGCATT+TGG | 0.315863 | 6_1:-93940510 | Msa0899120:CDS |
| CCCAATGATGGAAGCCCCTT+TGG | 0.334011 | 6_1:-93940590 | Msa0899120:CDS |
| TATGTTGAGTATCTTGCTTA+TGG | 0.336889 | 6_1:-93937041 | Msa0899120:three_prime_UTR |
| ATGATCACGACAGCACAATT+TGG | 0.337212 | 6_1:+93937655 | None:intergenic |
| AGAAGAGAAGGGTTTGTAAC+AGG | 0.372439 | 6_1:+93944670 | None:intergenic |
| TTGGGAGAGGAGCATATTCC+AGG | 0.372454 | 6_1:-93940491 | Msa0899120:CDS |
| ACCAAAGGGGCTTCCATCAT+TGG | 0.391806 | 6_1:+93940589 | None:intergenic |
| ATGCTTGATCATCTAGTTGC+AGG | 0.394775 | 6_1:-93938638 | Msa0899120:CDS |
| AGAAATACCCGTGTCGAAAC+AGG | 0.401405 | 6_1:+93937626 | None:intergenic |
| AGTGGCTATGTTGAGATAGA+TGG | 0.405918 | 6_1:-93938716 | Msa0899120:CDS |
| CATGTTTCTCAATCTGAAGT+TGG | 0.408924 | 6_1:-93944503 | Msa0899120:CDS |
| GTCATTGAGGGCGACGTTGT+TGG | 0.409677 | 6_1:-93940775 | Msa0899120:CDS |
| CAGAACCACGGTTGCAAAGT+TGG | 0.410595 | 6_1:+93944429 | None:intergenic |
| GGGAAGAGTGTGGTTGTTGA+TGG | 0.425783 | 6_1:+93944586 | None:intergenic |
| GGCTATGTAATCGAGCATTT+GGG | 0.440338 | 6_1:-93940509 | Msa0899120:CDS |
| CGTTCTAATGAAAAGAAAAC+GGG | 0.450446 | 6_1:+93940319 | None:intergenic |
| TCCTCAGCTGTCTTCAGCAA+TGG | 0.451442 | 6_1:+93940548 | None:intergenic |
| TATGCACGGTCTCAACTTTG+TGG | 0.451529 | 6_1:-93937001 | Msa0899120:three_prime_UTR |
| AGGAGCATATTCCAGGTATA+CGG | 0.452411 | 6_1:-93940484 | Msa0899120:CDS |
| CACACGAAATCCACATATCC+TGG | 0.461613 | 6_1:-93938662 | Msa0899120:CDS |
| TTTCTTCCATTTGTCATTGA+GGG | 0.468948 | 6_1:-93940787 | Msa0899120:CDS |
| TCTCAACATAGCCACTCATA+TGG | 0.469522 | 6_1:+93938723 | None:intergenic |
| AGGTTTGTTGAGCATTTAAG+AGG | 0.470542 | 6_1:-93940635 | Msa0899120:CDS |
| CCAAAGGGGCTTCCATCATT+GGG | 0.472746 | 6_1:+93940590 | None:intergenic |
| GCCGCATGGAATTGATTGTC+AGG | 0.474919 | 6_1:-93938381 | Msa0899120:CDS |
| AAGGAATGTGAAGAGGAAGC+AGG | 0.475425 | 6_1:-93938347 | Msa0899120:CDS |
| TCATCTAGTTGCAGGAGGAC+TGG | 0.475914 | 6_1:-93938630 | Msa0899120:intron |
| ACTAGATGATCAAGCATTCC+AGG | 0.480283 | 6_1:+93938644 | None:intergenic |
| ATATATGAAACAGCGCCAAC+AGG | 0.484156 | 6_1:+93937940 | None:intergenic |
| ACGTTCTAATGAAAAGAAAA+CGG | 0.490303 | 6_1:+93940318 | None:intergenic |
| ACGTCGCCCTCAATGACAAA+TGG | 0.490482 | 6_1:+93940781 | None:intergenic |
| GACCCTTGTTCTTATCTACA+AGG | 0.491771 | 6_1:-93944467 | Msa0899120:CDS |
| TCCGATAAAGACAACAATGC+TGG | 0.493005 | 6_1:+93936921 | None:intergenic |
| GAGGAAAGAACCAGCGCACT+TGG | 0.499212 | 6_1:-93940530 | Msa0899120:CDS |
| TTGTCAAATGAGGACTTCAC+AGG | 0.500036 | 6_1:+93940343 | None:intergenic |
| AATGAAACACAGTGACCAAA+GGG | 0.500047 | 6_1:+93940575 | None:intergenic |
| TTTCATATATGGACATCGAC+GGG | 0.501956 | 6_1:-93937927 | Msa0899120:CDS |
| ATTTCTTCCATTTGTCATTG+AGG | 0.503126 | 6_1:-93940788 | Msa0899120:CDS |
| TAGATGGGCAGAAGCACCTA+TGG | 0.503368 | 6_1:-93938700 | Msa0899120:CDS |
| TTGTTGGATTCATTCACAAT+CGG | 0.508086 | 6_1:-93940759 | Msa0899120:intron |
| CTCCTAAGAAGCTTAAGAAT+AGG | 0.508472 | 6_1:-93937108 | Msa0899120:CDS |
| AATACCTCGTTCCGTATACC+TGG | 0.509788 | 6_1:+93940473 | None:intergenic |
| TTGTCAGGAAAATGTTGTAA+AGG | 0.514029 | 6_1:-93938366 | Msa0899120:CDS |
| TTTCTTTATATTTATATGCA+CGG | 0.515073 | 6_1:-93937015 | Msa0899120:three_prime_UTR |
| TCGACGGGGATAGATACAAA+AGG | 0.523200 | 6_1:-93937912 | Msa0899120:CDS |
| ATCAAGCATTCCAGGATATG+TGG | 0.524432 | 6_1:+93938652 | None:intergenic |
| CCGAACTTACTTAATAGAGA+TGG | 0.527571 | 6_1:+93938313 | None:intergenic |
| ATACTCAACATAGAATTGCT+TGG | 0.530316 | 6_1:+93937052 | None:intergenic |
| GAGTGTGCACGTGCTGCCAC+TGG | 0.531569 | 6_1:+93944544 | None:intergenic |
| TTGACTTCCTGTTTCGACAC+GGG | 0.535466 | 6_1:-93937633 | Msa0899120:intron |
| TGATGGAGAGAAAGTGTGAG+AGG | 0.539269 | 6_1:+93944613 | None:intergenic |
| TTGCTACTGTTGCAGCCGCA+TGG | 0.541001 | 6_1:-93938395 | Msa0899120:intron |
| GCAGCACGTGCACACTCACA+TGG | 0.546676 | 6_1:-93944538 | Msa0899120:CDS |
| GATGGAGAGAAAGTGTGAGA+GGG | 0.553252 | 6_1:+93944614 | None:intergenic |
| TACTTAATAGAGATGGACCT+GGG | 0.564877 | 6_1:+93938320 | None:intergenic |
| TGTGCACGTGCTGCCACTGG+TGG | 0.568995 | 6_1:+93944547 | None:intergenic |
| TTGCTTGTAGGACAAACAAT+CGG | 0.569942 | 6_1:-93940812 | Msa0899120:intron |
| AAGAGGAAGCAGGAATCCCC+AGG | 0.577108 | 6_1:-93938337 | Msa0899120:CDS |
| CGACGGGGATAGATACAAAA+GGG | 0.578922 | 6_1:-93937911 | Msa0899120:CDS |
| TTTGTAACAGGACAAGGTAG+TGG | 0.582685 | 6_1:+93944682 | None:intergenic |
| GAAAACGGGTTTGTCAAATG+AGG | 0.582709 | 6_1:+93940333 | None:intergenic |
| CAATGAAACACAGTGACCAA+AGG | 0.586554 | 6_1:+93940574 | None:intergenic |
| GATTACATAGCCAAGTGCGC+TGG | 0.590241 | 6_1:+93940520 | None:intergenic |
| GACTTCTCTTCGCTATCCAT+AGG | 0.590285 | 6_1:+93938684 | None:intergenic |
| TCTTGCAGAGCTAAACCTGT+TGG | 0.594530 | 6_1:-93937955 | Msa0899120:intron |
| TTTCTGCAACTTGCTTAACA+GGG | 0.595814 | 6_1:+93937704 | None:intergenic |
| AAAGTCCAACTTTGCAACCG+TGG | 0.600157 | 6_1:-93944434 | Msa0899120:CDS |
| TGTAATCGAGCATTTGGGAG+AGG | 0.600564 | 6_1:-93940504 | Msa0899120:CDS |
| GAAGGGTTTGTAACAGGACA+AGG | 0.605097 | 6_1:+93944676 | None:intergenic |
| TGTTGTAAAGGAATGTGAAG+AGG | 0.609830 | 6_1:-93938354 | Msa0899120:CDS |
| ATTGACTTCCTGTTTCGACA+CGG | 0.610821 | 6_1:-93937634 | Msa0899120:CDS |
| GTGGCTATGTTGAGATAGAT+GGG | 0.621537 | 6_1:-93938715 | Msa0899120:CDS |
| TAACCTTGTAGATAAGAACA+AGG | 0.630962 | 6_1:+93944464 | None:intergenic |
| GTTTCATATATGGACATCGA+CGG | 0.645681 | 6_1:-93937928 | Msa0899120:CDS |
| GCTTATGGAGTCCATATGAG+TGG | 0.651417 | 6_1:-93938734 | Msa0899120:CDS |
| TTACTTAATAGAGATGGACC+TGG | 0.657192 | 6_1:+93938319 | None:intergenic |
| CTTGATCATCTAGTTGCAGG+AGG | 0.661487 | 6_1:-93938635 | Msa0899120:CDS |
| TGGTTGTTGATGGAAAATGA+TGG | 0.664559 | 6_1:+93944596 | None:intergenic |
| TCCTGACAATCAATTCCATG+CGG | 0.664669 | 6_1:+93938380 | None:intergenic |
| TCCATTGCTGAAGACAGCTG+AGG | 0.673124 | 6_1:-93940549 | Msa0899120:CDS |
| CAGCACGTGCACACTCACAT+GGG | 0.680877 | 6_1:-93944537 | Msa0899120:CDS |
| TGTCAAATGAGGACTTCACA+GGG | 0.682552 | 6_1:+93940344 | None:intergenic |
| AACCTTGTAGATAAGAACAA+GGG | 0.686515 | 6_1:+93944465 | None:intergenic |
| TTCATATATGGACATCGACG+GGG | 0.710863 | 6_1:-93937926 | Msa0899120:CDS |
| ACTTAATAGAGATGGACCTG+GGG | 0.711401 | 6_1:+93938321 | None:intergenic |
| TATTCCAGGTATACGGAACG+AGG | 0.728323 | 6_1:-93940477 | Msa0899120:intron |
| GTAAAGAACTCACAGAACCA+CGG | 0.729302 | 6_1:+93944417 | None:intergenic |
| ATGAAACACAGTGACCAAAG+GGG | 0.740460 | 6_1:+93940576 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTATCAATTTATGT+TGG | - | chr6_1:93937897-93937916 | Msa0899120:CDS | 10.0% |
| !!! | TTTTAATCTTTATAATCAAT+TGG | - | chr6_1:93938252-93938271 | Msa0899120:intron | 10.0% |
| !! | AACTCAAAAAAAAATAAAAA+TGG | - | chr6_1:93941796-93941815 | Msa0899120:intron | 10.0% |
| !!! | GATTTTTATCAATTTTTGTT+TGG | - | chr6_1:93937424-93937443 | Msa0899120:intron | 15.0% |
| !!! | TATTTTTATCAATTTCTGTT+TGG | - | chr6_1:93937580-93937599 | Msa0899120:intron | 15.0% |
| !!! | TGATTTTATAAAGTTGATTT+TGG | - | chr6_1:93937798-93937817 | Msa0899120:intron | 15.0% |
| !!! | TATCATTAGTTTTGAAATTT+GGG | - | chr6_1:93938275-93938294 | Msa0899120:intron | 15.0% |
| !!! | ATTTTAAGTTATTAACTGTA+AGG | - | chr6_1:93938554-93938573 | Msa0899120:intron | 15.0% |
| !! | TATTTCAACTCAATTTATAT+AGG | - | chr6_1:93938922-93938941 | Msa0899120:intron | 15.0% |
| !!! | TACTTGTATTTAATTTCATA+AGG | - | chr6_1:93939174-93939193 | Msa0899120:intron | 15.0% |
| !!! | ACTTTTCATTAAGATTTTTT+TGG | - | chr6_1:93940779-93940798 | Msa0899120:CDS | 15.0% |
| !!! | AAATGGGTTTTTATAATATT+GGG | + | chr6_1:93941700-93941719 | None:intergenic | 15.0% |
| !!! | TAAATGGGTTTTTATAATAT+TGG | + | chr6_1:93941701-93941720 | None:intergenic | 15.0% |
| !! | CTAAAAATAATTTAAATGAG+TGG | - | chr6_1:93942322-93942341 | Msa0899120:intron | 15.0% |
| !!! | GTGTATTAATTTTAAGAAAA+GGG | - | chr6_1:93942505-93942524 | Msa0899120:intron | 15.0% |
| !! | TTTCTTTATATTTATATGCA+CGG | - | chr6_1:93944686-93944705 | Msa0899120:CDS | 15.0% |
| !! | TCAATATTATCTTTAATTCT+TGG | - | chr6_1:93944747-93944766 | Msa0899120:intron | 15.0% |
| !! | AGAATTATTTGAATGTAAAG+TGG | - | chr6_1:93937367-93937386 | Msa0899120:intron | 20.0% |
| !! | TGGATATATTGAACTAAAAT+TGG | - | chr6_1:93937600-93937619 | Msa0899120:intron | 20.0% |
| !! | ACTTTATCTTCAAATCAATT+CGG | + | chr6_1:93938010-93938029 | None:intergenic | 20.0% |
| !! | AATTCATATTATCCAAAGTT+TGG | + | chr6_1:93938087-93938106 | None:intergenic | 20.0% |
| !! | TTCTCATTCAATAAAGAAAA+GGG | + | chr6_1:93938161-93938180 | None:intergenic | 20.0% |
| !! | ATTCTCATTCAATAAAGAAA+AGG | + | chr6_1:93938162-93938181 | None:intergenic | 20.0% |
| !!! | TTTTCTTTATTGAATGAGAA+TGG | - | chr6_1:93938161-93938180 | Msa0899120:intron | 20.0% |
| !! | ACTTTATTGAAAAAAAGAAG+TGG | + | chr6_1:93938233-93938252 | None:intergenic | 20.0% |
| !!! | GTATCATTAGTTTTGAAATT+TGG | - | chr6_1:93938274-93938293 | Msa0899120:intron | 20.0% |
| !! | TTGTGAGTTTAATAATATAG+GGG | + | chr6_1:93938368-93938387 | None:intergenic | 20.0% |
| !! | GTTGTGAGTTTAATAATATA+GGG | + | chr6_1:93938369-93938388 | None:intergenic | 20.0% |
| !! | TGTTGTGAGTTTAATAATAT+AGG | + | chr6_1:93938370-93938389 | None:intergenic | 20.0% |
| !!! | TTTAATTTCATAAGGAAGTT+AGG | - | chr6_1:93939182-93939201 | Msa0899120:intron | 20.0% |
| !! | TAGAAAATTTAGAGAGAAAA+TGG | - | chr6_1:93939814-93939833 | Msa0899120:intron | 20.0% |
| !! | TAAGATTGGATTTAATTGAT+TGG | - | chr6_1:93940209-93940228 | Msa0899120:intron | 20.0% |
| !!! | AGTGTTAATATTTTGATGTT+TGG | - | chr6_1:93940437-93940456 | Msa0899120:intron | 20.0% |
| !!! | GTGTTAATATTTTGATGTTT+GGG | - | chr6_1:93940438-93940457 | Msa0899120:intron | 20.0% |
| !! | ATTCTAAACTTGATTCAAAA+TGG | + | chr6_1:93940665-93940684 | None:intergenic | 20.0% |
| !!! | ATTAACCTCTAATAGATTTT+TGG | - | chr6_1:93940683-93940702 | Msa0899120:intron | 20.0% |
| !!! | TTTTCAAATACTTAAAGTCA+TGG | + | chr6_1:93940719-93940738 | None:intergenic | 20.0% |
| !! | TATAAGGAAAAATGAAGAAA+GGG | + | chr6_1:93940979-93940998 | None:intergenic | 20.0% |
| !! | TTATAAGGAAAAATGAAGAA+AGG | + | chr6_1:93940980-93940999 | None:intergenic | 20.0% |
| !! | GTTATTCATGAATATTTCTT+TGG | - | chr6_1:93941024-93941043 | Msa0899120:intron | 20.0% |
| !! | CAAAAAAAAACATCAATCTT+TGG | - | chr6_1:93941503-93941522 | Msa0899120:intron | 20.0% |
| !! | TAATATCTTCCTCTAATTTA+CGG | - | chr6_1:93941738-93941757 | Msa0899120:intron | 20.0% |
| !!! | TTCATTAAACAAATTTTGTG+GGG | + | chr6_1:93941825-93941844 | None:intergenic | 20.0% |
| !!! | CTTCATTAAACAAATTTTGT+GGG | + | chr6_1:93941826-93941845 | None:intergenic | 20.0% |
| !!! | ACTTCATTAAACAAATTTTG+TGG | + | chr6_1:93941827-93941846 | None:intergenic | 20.0% |
| !!! | GAGAAATTTATTACAACTTT+TGG | + | chr6_1:93942460-93942479 | None:intergenic | 20.0% |
| !!! | GGTGTATTAATTTTAAGAAA+AGG | - | chr6_1:93942504-93942523 | Msa0899120:intron | 20.0% |
| !!! | TTTTTGCTTATATATATGAC+CGG | - | chr6_1:93942617-93942636 | Msa0899120:intron | 20.0% |
| !! | TTATATAGCTGCTAAAAAAA+AGG | + | chr6_1:93942737-93942756 | None:intergenic | 20.0% |
| !! | AAGGATGAAATTAATATCAA+CGG | - | chr6_1:93943215-93943234 | Msa0899120:intron | 20.0% |
| !! | TTGTTACATTAAATAACAGA+TGG | - | chr6_1:93943950-93943969 | Msa0899120:intron | 20.0% |
| !! | AAACACATATTTCATAAGTA+GGG | + | chr6_1:93944133-93944152 | None:intergenic | 20.0% |
| !! | ATCACAACATATAATCATTA+AGG | + | chr6_1:93944532-93944551 | None:intergenic | 20.0% |
| ! | AATGTAAAGTGGTTTATGTT+TGG | - | chr6_1:93937378-93937397 | Msa0899120:intron | 25.0% |
| !!! | TAGAAATATTAGCTTTTAGC+TGG | - | chr6_1:93937490-93937509 | Msa0899120:intron | 25.0% |
| ! | TGTGTGTGTGTAATAAATTT+GGG | - | chr6_1:93937628-93937647 | Msa0899120:intron | 25.0% |
| ! | AAAGTTCAACTTTGTAATTG+TGG | - | chr6_1:93937698-93937717 | Msa0899120:CDS | 25.0% |
| !!! | GAATTGATTTGAAGATAAAG+TGG | - | chr6_1:93938009-93938028 | Msa0899120:intron | 25.0% |
| !! | GTGATTTTTGTGTTTATGTT+TGG | - | chr6_1:93938058-93938077 | Msa0899120:intron | 25.0% |
| ! | TTATGCGAAAATTCACAATT+GGG | + | chr6_1:93938210-93938229 | None:intergenic | 25.0% |
| ! | ACAATGATCACTGATAAAAT+CGG | - | chr6_1:93938387-93938406 | Msa0899120:intron | 25.0% |
| ! | AACAAATTACGATAACCAAA+AGG | + | chr6_1:93938434-93938453 | None:intergenic | 25.0% |
| !!! | TTTTGGTTATCGTAATTTGT+TGG | - | chr6_1:93938433-93938452 | Msa0899120:intron | 25.0% |
| !!! | TTTGGTTATCGTAATTTGTT+GGG | - | chr6_1:93938434-93938453 | Msa0899120:intron | 25.0% |
| !! | ATAGATTGTGTTATTGAGTT+TGG | - | chr6_1:93938493-93938512 | Msa0899120:intron | 25.0% |
| ! | AAGTTATTAACTGTAAGGTT+AGG | - | chr6_1:93938559-93938578 | Msa0899120:intron | 25.0% |
| !!! | TCTAATGTCCTACTTTTTTT+GGG | + | chr6_1:93938671-93938690 | None:intergenic | 25.0% |
| !!! | ATCTAATGTCCTACTTTTTT+TGG | + | chr6_1:93938672-93938691 | None:intergenic | 25.0% |
| ! | AAAAAAAGTAGGACATTAGA+TGG | - | chr6_1:93938671-93938690 | Msa0899120:CDS | 25.0% |
| ! | GCTACTTATATGCTAAATTA+AGG | + | chr6_1:93938808-93938827 | None:intergenic | 25.0% |
| ! | AATTGATATTTCAGGCATAT+TGG | + | chr6_1:93939018-93939037 | None:intergenic | 25.0% |
| !!! | TATGGATTCTAGTTTTTGAT+GGG | - | chr6_1:93939211-93939230 | Msa0899120:intron | 25.0% |
| !!! | ACTATTTTGACTGAGTAATT+CGG | + | chr6_1:93939485-93939504 | None:intergenic | 25.0% |
| ! | AGATATTATTAAGACACTCT+CGG | + | chr6_1:93939671-93939690 | None:intergenic | 25.0% |
| ! | CAGTTTAAATATCTTGTGAA+TGG | - | chr6_1:93939788-93939807 | Msa0899120:intron | 25.0% |
| ! | ATTGGATTTAATTGATTGGA+CGG | - | chr6_1:93940213-93940232 | Msa0899120:intron | 25.0% |
| !!! | TTACTCTTTTTTTTGCTGAT+GGG | - | chr6_1:93940263-93940282 | Msa0899120:intron | 25.0% |
| ! | AGGAGTTATTTATCATTTGA+TGG | - | chr6_1:93940411-93940430 | Msa0899120:intron | 25.0% |
| !!! | TATTTTGATGTTTGGGAAAT+TGG | - | chr6_1:93940445-93940464 | Msa0899120:intron | 25.0% |
| ! | GTTAATGTGAATGATGTTAA+GGG | + | chr6_1:93940643-93940662 | None:intergenic | 25.0% |
| ! | ATTGTCCAAAAATCTATTAG+AGG | + | chr6_1:93940691-93940710 | None:intergenic | 25.0% |
| ! | AACAAGACAATCTATTTAAG+AGG | + | chr6_1:93940859-93940878 | None:intergenic | 25.0% |
| !!! | GTTAAACTTTGAAATTGTTC+AGG | - | chr6_1:93941046-93941065 | Msa0899120:intron | 25.0% |
| ! | ACGTTCTAATGAAAAGAAAA+CGG | + | chr6_1:93941386-93941405 | None:intergenic | 25.0% |
| ! | GAATTGAAATGAATGCATTA+TGG | + | chr6_1:93941653-93941672 | None:intergenic | 25.0% |
| ! | ATTAGAGGAAGATATTATTG+TGG | + | chr6_1:93941735-93941754 | None:intergenic | 25.0% |
| !! | ATTCAAGATACTTTGTTTGA+AGG | - | chr6_1:93941941-93941960 | Msa0899120:intron | 25.0% |
| ! | TGAAGGATTAAGCAAATATT+TGG | - | chr6_1:93942263-93942282 | Msa0899120:intron | 25.0% |
| !!! | TGGTTTTTGAAATAAATGTG+AGG | - | chr6_1:93942342-93942361 | Msa0899120:intron | 25.0% |
| ! | AAATAAATGTGAGGTTACTT+TGG | - | chr6_1:93942351-93942370 | Msa0899120:intron | 25.0% |
| ! | AAAACATGTTTAAGCTCATT+CGG | + | chr6_1:93942399-93942418 | None:intergenic | 25.0% |
| ! | GTAATAAATTTCTCTGAATG+CGG | - | chr6_1:93942466-93942485 | Msa0899120:intron | 25.0% |
| ! | AGCAAAAAAAACAACTTTCA+CGG | + | chr6_1:93942605-93942624 | None:intergenic | 25.0% |
| ! | AATAAAAGACATGTAATGAG+AGG | + | chr6_1:93942813-93942832 | None:intergenic | 25.0% |
| !!! | TTTTATTCTCTTTGAAGCAT+AGG | - | chr6_1:93942945-93942964 | Msa0899120:intron | 25.0% |
| ! | AGAAATGTTTAACATGTCAA+GGG | + | chr6_1:93943143-93943162 | None:intergenic | 25.0% |
| ! | AAGAAATGTTTAACATGTCA+AGG | + | chr6_1:93943144-93943163 | None:intergenic | 25.0% |
| ! | TGAAATTAATATCAACGGAT+TGG | - | chr6_1:93943220-93943239 | Msa0899120:intron | 25.0% |
| !! | TGCTATTAAGTGTTTTCTTT+AGG | - | chr6_1:93943250-93943269 | Msa0899120:intron | 25.0% |
| !! | GCTATTAAGTGTTTTCTTTA+GGG | - | chr6_1:93943251-93943270 | Msa0899120:intron | 25.0% |
| !! | ATGTCTATAATCTAAAGTGT+CGG | + | chr6_1:93943498-93943517 | None:intergenic | 25.0% |
| ! | AATTGGAGAATGAGTTTAAA+AGG | + | chr6_1:93943878-93943897 | None:intergenic | 25.0% |
| ! | AATGTAACAAGTTACTACAA+AGG | + | chr6_1:93943940-93943959 | None:intergenic | 25.0% |
| ! | CAAACACATATTTCATAAGT+AGG | + | chr6_1:93944134-93944153 | None:intergenic | 25.0% |
| !!! | ATAATGGAATTGGATTTTCA+AGG | - | chr6_1:93944406-93944425 | Msa0899120:intron | 25.0% |
| !!! | AGGCTTTATGAATGTATTTT+AGG | - | chr6_1:93944426-93944445 | Msa0899120:intron | 25.0% |
| !!! | TGCATTTGTTTTCTTATTCT+TGG | - | chr6_1:93944492-93944511 | Msa0899120:CDS | 25.0% |
| !!! | GCATTTGTTTTCTTATTCTT+GGG | - | chr6_1:93944493-93944512 | Msa0899120:CDS | 25.0% |
| !!! | CATTTGTTTTCTTATTCTTG+GGG | - | chr6_1:93944494-93944513 | Msa0899120:CDS | 25.0% |
| ! | TACATAAGTCCTGAAAATTA+TGG | - | chr6_1:93944560-93944579 | Msa0899120:CDS | 25.0% |
| ! | TCCTGAAAATTATGGATATT+TGG | - | chr6_1:93944568-93944587 | Msa0899120:CDS | 25.0% |
| !! | TCCAAATATCCATAATTTTC+AGG | + | chr6_1:93944572-93944591 | None:intergenic | 25.0% |
| ! | TGGCAAGCTATATAATAAAA+AGG | - | chr6_1:93944720-93944739 | Msa0899120:intron | 25.0% |
| ! | GCATGTGATTTTCATCATTT+TGG | + | chr6_1:93936992-93937011 | None:intergenic | 30.0% |
| AACCTTGTAGATAAGAACAA+GGG | + | chr6_1:93937239-93937258 | None:intergenic | 30.0% | |
| TAACCTTGTAGATAAGAACA+AGG | + | chr6_1:93937240-93937259 | None:intergenic | 30.0% | |
| GTGTGTGTGTGTAATAAATT+TGG | - | chr6_1:93937627-93937646 | Msa0899120:intron | 30.0% | |
| GATGTATGACATTGTATGTT+TGG | - | chr6_1:93937844-93937863 | Msa0899120:intron | 30.0% | |
| !!! | TATTAGCTTTTGTATGCGTT+TGG | - | chr6_1:93937957-93937976 | Msa0899120:intron | 30.0% |
| TGAAGATAAAGTGGTATCTT+TGG | - | chr6_1:93938018-93938037 | Msa0899120:intron | 30.0% | |
| ! | TATGTTTGGAATCCAAACTT+TGG | - | chr6_1:93938072-93938091 | Msa0899120:intron | 30.0% |
| GTTATGCGAAAATTCACAAT+TGG | + | chr6_1:93938211-93938230 | None:intergenic | 30.0% | |
| !!! | GTCTCTTAATTTTGAAGTGA+AGG | - | chr6_1:93938297-93938316 | Msa0899120:intron | 30.0% |
| !! | TTGAGTTTGGAATTGCTTTT+AGG | - | chr6_1:93938506-93938525 | Msa0899120:intron | 30.0% |
| ACATTGAGCTTTCATTCTAT+CGG | - | chr6_1:93938716-93938735 | Msa0899120:CDS | 30.0% | |
| !! | GCTAGTTATTTCCCTTTTAA+CGG | - | chr6_1:93938751-93938770 | Msa0899120:intron | 30.0% |
| TAAAATCTAAACCCAAATGC+TGG | + | chr6_1:93938865-93938884 | None:intergenic | 30.0% | |
| AGTCGTGTAAAACATAACTA+TGG | - | chr6_1:93938976-93938995 | Msa0899120:intron | 30.0% | |
| GGGAAAGTAATTGATATTTC+AGG | + | chr6_1:93939026-93939045 | None:intergenic | 30.0% | |
| !!! | GTATGGATTCTAGTTTTTGA+TGG | - | chr6_1:93939210-93939229 | Msa0899120:intron | 30.0% |
| CTGCTAAATTGTTTCATGAA+AGG | + | chr6_1:93939257-93939276 | None:intergenic | 30.0% | |
| GTCGCTAAATAAAGACATTT+CGG | - | chr6_1:93939289-93939308 | Msa0899120:intron | 30.0% | |
| AGAAGGAGATTGTTTAAATG+AGG | - | chr6_1:93939365-93939384 | Msa0899120:intron | 30.0% | |
| !!! | CTATTTTGACTGAGTAATTC+GGG | + | chr6_1:93939484-93939503 | None:intergenic | 30.0% |
| TATGGTTACATTGAAAACGA+AGG | - | chr6_1:93939568-93939587 | Msa0899120:intron | 30.0% | |
| GATATTATTAAGACACTCTC+GGG | + | chr6_1:93939670-93939689 | None:intergenic | 30.0% | |
| !!! | AGTTTATTGCCCCATTTTTT+CGG | - | chr6_1:93939692-93939711 | Msa0899120:intron | 30.0% |
| TGTGGATTTGATCGTTAAAA+TGG | - | chr6_1:93939718-93939737 | Msa0899120:intron | 30.0% | |
| ATTTGATCGTTAAAATGGCT+CGG | - | chr6_1:93939723-93939742 | Msa0899120:intron | 30.0% | |
| !!! | TTTACTGTTTTTGTCTGTCT+TGG | - | chr6_1:93939937-93939956 | Msa0899120:intron | 30.0% |
| !!! | TTACTGTTTTTGTCTGTCTT+GGG | - | chr6_1:93939938-93939957 | Msa0899120:intron | 30.0% |
| ! | ACATCGTATAGTTTTCTTGT+CGG | - | chr6_1:93940112-93940131 | Msa0899120:intron | 30.0% |
| TTTCTAATGCAGATTTGTCT+CGG | - | chr6_1:93940146-93940165 | Msa0899120:intron | 30.0% | |
| TTGGATTTAATTGATTGGAC+GGG | - | chr6_1:93940214-93940233 | Msa0899120:intron | 30.0% | |
| !!! | GTTACTCTTTTTTTTGCTGA+TGG | - | chr6_1:93940262-93940281 | Msa0899120:intron | 30.0% |
| !!! | TTGGGAAATTGGTTTTGTTT+AGG | - | chr6_1:93940456-93940475 | Msa0899120:intron | 30.0% |
| !!! | GAAATTGGTTTTGTTTAGGA+TGG | - | chr6_1:93940460-93940479 | Msa0899120:intron | 30.0% |
| GGTTAATGTGAATGATGTTA+AGG | + | chr6_1:93940644-93940663 | None:intergenic | 30.0% | |
| TTGATTTCGAAATTGCTTGT+AGG | - | chr6_1:93940877-93940896 | Msa0899120:intron | 30.0% | |
| ATTTCTTCCATTTGTCATTG+AGG | - | chr6_1:93940913-93940932 | Msa0899120:intron | 30.0% | |
| TTTCTTCCATTTGTCATTGA+GGG | - | chr6_1:93940914-93940933 | Msa0899120:intron | 30.0% | |
| TTGTTGGATTCATTCACAAT+CGG | - | chr6_1:93940942-93940961 | Msa0899120:intron | 30.0% | |
| TATGACACAAGCATCTTATA+AGG | + | chr6_1:93940995-93941014 | None:intergenic | 30.0% | |
| CATTCAATGAAAGAGAATGA+TGG | + | chr6_1:93941284-93941303 | None:intergenic | 30.0% | |
| AAAACACAGACAAGAAATGT+AGG | + | chr6_1:93941327-93941346 | None:intergenic | 30.0% | |
| CGTTCTAATGAAAAGAAAAC+GGG | + | chr6_1:93941385-93941404 | None:intergenic | 30.0% | |
| TGTACCTTTATGCCAAAATA+AGG | + | chr6_1:93941418-93941437 | None:intergenic | 30.0% | |
| ! | GAGGGTGTATAAATTTAGTT+TGG | + | chr6_1:93941467-93941486 | None:intergenic | 30.0% |
| AACTAAATTTATACACCCTC+CGG | - | chr6_1:93941467-93941486 | Msa0899120:intron | 30.0% | |
| ! | TTTTTGCTTATATACGTGAC+CGG | + | chr6_1:93941489-93941508 | None:intergenic | 30.0% |
| TAGGAATAACAGTGTAAAAG+TGG | + | chr6_1:93941551-93941570 | None:intergenic | 30.0% | |
| ! | AGACTTTAAAGGGGTATATT+AGG | + | chr6_1:93941570-93941589 | None:intergenic | 30.0% |
| AAACCACAGAAGACTTTAAA+GGG | + | chr6_1:93941580-93941599 | None:intergenic | 30.0% | |
| AAAACCACAGAAGACTTTAA+AGG | + | chr6_1:93941581-93941600 | None:intergenic | 30.0% | |
| GTGGAGAATTGACAATAAAT+GGG | + | chr6_1:93941716-93941735 | None:intergenic | 30.0% | |
| TGTGGAGAATTGACAATAAA+TGG | + | chr6_1:93941717-93941736 | None:intergenic | 30.0% | |
| AAAGAAGAAGTTGTATTGCA+GGG | + | chr6_1:93941774-93941793 | None:intergenic | 30.0% | |
| AAAAGAAGAAGTTGTATTGC+AGG | + | chr6_1:93941775-93941794 | None:intergenic | 30.0% | |
| ! | CAAAGTATCTTGAATTACGT+TGG | + | chr6_1:93941936-93941955 | None:intergenic | 30.0% |
| CTAAAAAAAAGGTCTGAACT+TGG | + | chr6_1:93942726-93942745 | None:intergenic | 30.0% | |
| TTGTATCCTAAAGCTCTTAT+CGG | - | chr6_1:93942898-93942917 | Msa0899120:intron | 30.0% | |
| GGGTAATATGTATTATCATC+CGG | - | chr6_1:93943271-93943290 | Msa0899120:intron | 30.0% | |
| TTGTCAGGAAAATGTTGTAA+AGG | - | chr6_1:93943335-93943354 | Msa0899120:intron | 30.0% | |
| CCATCTCTATTAAGTAAGTT+CGG | - | chr6_1:93943388-93943407 | Msa0899120:intron | 30.0% | |
| ! | AATCCAATTTTGTGCACTAA+AGG | + | chr6_1:93943440-93943459 | None:intergenic | 30.0% |
| TCTCAAATTAACACCAATGT+CGG | - | chr6_1:93943573-93943592 | Msa0899120:intron | 30.0% | |
| AGCAAATGGTTGGATATTTA+TGG | + | chr6_1:93943688-93943707 | None:intergenic | 30.0% | |
| ! | TTTTCATTTCAGCAAATGGT+TGG | + | chr6_1:93943698-93943717 | None:intergenic | 30.0% |
| ! | GGATTTTTCATTTCAGCAAA+TGG | + | chr6_1:93943702-93943721 | None:intergenic | 30.0% |
| AAGAAATGTATGAAATGACG+TGG | + | chr6_1:93944109-93944128 | None:intergenic | 30.0% | |
| ! | TTCTCAGTGGTGTTAAATAA+CGG | - | chr6_1:93944164-93944183 | Msa0899120:intron | 30.0% |
| TTATACTGAATAGCGTATCA+TGG | + | chr6_1:93944237-93944256 | None:intergenic | 30.0% | |
| AATGTTGTCAATTGTCAAAG+CGG | - | chr6_1:93944257-93944276 | Msa0899120:intron | 30.0% | |
| AATCCAATTCCATTATGACA+CGG | + | chr6_1:93944402-93944421 | None:intergenic | 30.0% | |
| ATACTCAACATAGAATTGCT+TGG | + | chr6_1:93944652-93944671 | None:intergenic | 30.0% | |
| TATGTTGAGTATCTTGCTTA+TGG | - | chr6_1:93944660-93944679 | Msa0899120:CDS | 30.0% | |
| GAAGAAGAAGAAGAAGAGAA+GGG | + | chr6_1:93937045-93937064 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAAGAGA+AGG | + | chr6_1:93937046-93937065 | None:intergenic | 35.0% | |
| ! | TGGTTGTTGATGGAAAATGA+TGG | + | chr6_1:93937108-93937127 | None:intergenic | 35.0% |
| ! | CATGTTTCTCAATCTGAAGT+TGG | - | chr6_1:93937198-93937217 | Msa0899120:intron | 35.0% |
| ACACAAAAGAGAGGTGATTA+AGG | + | chr6_1:93937309-93937328 | None:intergenic | 35.0% | |
| !!! | TGAGTGTATGCTTGGTTTTA+AGG | - | chr6_1:93937519-93937538 | Msa0899120:intron | 35.0% |
| !!! | GAGTGTATGCTTGGTTTTAA+GGG | - | chr6_1:93937520-93937539 | Msa0899120:intron | 35.0% |
| ACACAAAAGAGAGGTAAGTA+AGG | + | chr6_1:93937740-93937759 | None:intergenic | 35.0% | |
| AAACGAAACACACAAAAGAG+AGG | + | chr6_1:93937749-93937768 | None:intergenic | 35.0% | |
| ! | TCTTTTGTGTGTTTCGTTTG+CGG | - | chr6_1:93937750-93937769 | Msa0899120:intron | 35.0% |
| !! | GAAAGTGCAATTAAGCCTTT+TGG | - | chr6_1:93938416-93938435 | Msa0899120:intron | 35.0% |
| TCTCCAAGAAACGTGAAATA+TGG | - | chr6_1:93938601-93938620 | Msa0899120:intron | 35.0% | |
| ATGCCATATTTCACGTTTCT+TGG | + | chr6_1:93938607-93938626 | None:intergenic | 35.0% | |
| AAGTCCAACCCAAAAAAAGT+AGG | - | chr6_1:93938660-93938679 | Msa0899120:CDS | 35.0% | |
| !!! | ATGTCCTACTTTTTTTGGGT+TGG | + | chr6_1:93938667-93938686 | None:intergenic | 35.0% |
| AAAGGGAAATAACTAGCATC+AGG | + | chr6_1:93938748-93938767 | None:intergenic | 35.0% | |
| ACTCATCTATCAGTATTCAG+TGG | - | chr6_1:93938778-93938797 | Msa0899120:intron | 35.0% | |
| TTCATAAGGAAGTTAGGCAA+TGG | - | chr6_1:93939188-93939207 | Msa0899120:intron | 35.0% | |
| GTTTAAATGAGGAGAAGACT+TGG | - | chr6_1:93939376-93939395 | Msa0899120:intron | 35.0% | |
| GAAAACGATAGTTGAGTTTG+AGG | - | chr6_1:93939446-93939465 | Msa0899120:intron | 35.0% | |
| ATAGTGTATTCTGTGTTGAG+TGG | - | chr6_1:93939500-93939519 | Msa0899120:intron | 35.0% | |
| TAGTGTATTCTGTGTTGAGT+GGG | - | chr6_1:93939501-93939520 | Msa0899120:intron | 35.0% | |
| ! | TTCGGAAATTTGAAGCTCTA+TGG | - | chr6_1:93939550-93939569 | Msa0899120:intron | 35.0% |
| !! | TGAAAACGAAGGTTCTAGAA+TGG | - | chr6_1:93939579-93939598 | Msa0899120:intron | 35.0% |
| TCAAAATAGACTCTCGACTA+AGG | - | chr6_1:93939610-93939629 | Msa0899120:intron | 35.0% | |
| ! | GGATAGTCATCTTTTTGTGT+AGG | - | chr6_1:93939631-93939650 | Msa0899120:intron | 35.0% |
| ! | TAGTCATCTTTTTGTGTAGG+TGG | - | chr6_1:93939634-93939653 | Msa0899120:intron | 35.0% |
| ! | AGTCATCTTTTTGTGTAGGT+GGG | - | chr6_1:93939635-93939654 | Msa0899120:intron | 35.0% |
| GAGAGAAAATGGCTGTTATT+TGG | - | chr6_1:93939825-93939844 | Msa0899120:intron | 35.0% | |
| TTATTTGGTACTCCAATGTG+TGG | - | chr6_1:93939840-93939859 | Msa0899120:intron | 35.0% | |
| TATTTGGTACTCCAATGTGT+GGG | - | chr6_1:93939841-93939860 | Msa0899120:intron | 35.0% | |
| ! | AGCAGTTTGATCCTTTGTTT+AGG | - | chr6_1:93940183-93940202 | Msa0899120:intron | 35.0% |
| TGGATTTAATTGATTGGACG+GGG | - | chr6_1:93940215-93940234 | Msa0899120:intron | 35.0% | |
| CAGCGTAAGTTTATTGAGAA+GGG | - | chr6_1:93940286-93940305 | Msa0899120:intron | 35.0% | |
| GTAAGTTTATTGAGAAGGGT+TGG | - | chr6_1:93940290-93940309 | Msa0899120:intron | 35.0% | |
| !!! | CGAGCTAAGAGCATTTTTTT+TGG | - | chr6_1:93940346-93940365 | Msa0899120:CDS | 35.0% |
| !!! | GTTTTTTTCGCTTAGCTCAT+AGG | - | chr6_1:93940391-93940410 | Msa0899120:intron | 35.0% |
| AAAATTAACTTTACACCCGC+AGG | + | chr6_1:93940836-93940855 | None:intergenic | 35.0% | |
| TTGCTTGTAGGACAAACAAT+CGG | - | chr6_1:93940889-93940908 | Msa0899120:intron | 35.0% | |
| !! | AGGTTTGTTGAGCATTTAAG+AGG | - | chr6_1:93941066-93941085 | Msa0899120:intron | 35.0% |
| AATGAAACACAGTGACCAAA+GGG | + | chr6_1:93941129-93941148 | None:intergenic | 35.0% | |
| ACAGACAAGAAATGTAGGTT+AGG | + | chr6_1:93941322-93941341 | None:intergenic | 35.0% | |
| !!! | AGCTCCTTATTTTGGCATAA+AGG | - | chr6_1:93941411-93941430 | Msa0899120:intron | 35.0% |
| ! | AACCACAGAAGACTTTAAAG+GGG | + | chr6_1:93941579-93941598 | None:intergenic | 35.0% |
| TGCATTATGGAAAGCTGTTA+TGG | + | chr6_1:93941640-93941659 | None:intergenic | 35.0% | |
| TTCACCACAAGTTTAACTCT+TGG | - | chr6_1:93941670-93941689 | Msa0899120:intron | 35.0% | |
| TACACCAAGAGTTAAACTTG+TGG | + | chr6_1:93941677-93941696 | None:intergenic | 35.0% | |
| GATAGACAACCGTAAATTAG+AGG | + | chr6_1:93941750-93941769 | None:intergenic | 35.0% | |
| ! | TGAAGTACCCTCATTTGATT+TGG | - | chr6_1:93941841-93941860 | Msa0899120:intron | 35.0% |
| ! | GAAGTACCCTCATTTGATTT+GGG | - | chr6_1:93941842-93941861 | Msa0899120:intron | 35.0% |
| TGAGTCTTCAACAACAAGAA+GGG | + | chr6_1:93941894-93941913 | None:intergenic | 35.0% | |
| ! | GATGTCAAAAAGTGATGATG+AGG | - | chr6_1:93941970-93941989 | Msa0899120:intron | 35.0% |
| GTGTTTGAAGATGTAGCATT+TGG | - | chr6_1:93942013-93942032 | Msa0899120:intron | 35.0% | |
| TTTGAAGATGTAGCATTTGG+AGG | - | chr6_1:93942016-93942035 | Msa0899120:intron | 35.0% | |
| TTGAAGATGTAGCATTTGGA+GGG | - | chr6_1:93942017-93942036 | Msa0899120:intron | 35.0% | |
| TAGAAGACCCATCTTCAATA+GGG | + | chr6_1:93942075-93942094 | None:intergenic | 35.0% | |
| ATAGAAGACCCATCTTCAAT+AGG | + | chr6_1:93942076-93942095 | None:intergenic | 35.0% | |
| ! | AGCTTTTCTGGACTTAAACA+TGG | - | chr6_1:93942177-93942196 | Msa0899120:intron | 35.0% |
| TGAAGTTCCAAGTGAAACAA+TGG | - | chr6_1:93942216-93942235 | Msa0899120:intron | 35.0% | |
| TTGCTTATATATATGACCGG+AGG | - | chr6_1:93942620-93942639 | Msa0899120:intron | 35.0% | |
| TGCTTATATATATGACCGGA+GGG | - | chr6_1:93942621-93942640 | Msa0899120:intron | 35.0% | |
| CTAAACTTGGACAGAGATAA+CGG | + | chr6_1:93942694-93942713 | None:intergenic | 35.0% | |
| TTGGATAGCATTGCTAAACT+TGG | + | chr6_1:93942707-93942726 | None:intergenic | 35.0% | |
| GACATGTAATGAGAGGTAAT+TGG | + | chr6_1:93942806-93942825 | None:intergenic | 35.0% | |
| !! | AAGAGCTTTAGGATACAATC+TGG | + | chr6_1:93942896-93942915 | None:intergenic | 35.0% |
| GATAATGTGTAACTGCTGAA+AGG | - | chr6_1:93943196-93943215 | Msa0899120:intron | 35.0% | |
| GTAGCAATTAACTCAAACTC+CGG | + | chr6_1:93943293-93943312 | None:intergenic | 35.0% | |
| TGTTGTAAAGGAATGTGAAG+AGG | - | chr6_1:93943347-93943366 | Msa0899120:intron | 35.0% | |
| TACTTAATAGAGATGGACCT+GGG | + | chr6_1:93943384-93943403 | None:intergenic | 35.0% | |
| TTACTTAATAGAGATGGACC+TGG | + | chr6_1:93943385-93943404 | None:intergenic | 35.0% | |
| CCGAACTTACTTAATAGAGA+TGG | + | chr6_1:93943391-93943410 | None:intergenic | 35.0% | |
| CTATTAAGTAAGTTCGGAAC+TGG | - | chr6_1:93943394-93943413 | Msa0899120:intron | 35.0% | |
| AATGTAATCACATGTGTCAG+TGG | + | chr6_1:93943538-93943557 | None:intergenic | 35.0% | |
| ! | AGCTAACTGAACTTCTTTTG+TGG | - | chr6_1:93943626-93943645 | Msa0899120:intron | 35.0% |
| CCAATGAAGAGACATTTAAC+TGG | + | chr6_1:93943723-93943742 | None:intergenic | 35.0% | |
| CCAGTTAAATGTCTCTTCAT+TGG | - | chr6_1:93943720-93943739 | Msa0899120:intron | 35.0% | |
| GTTTCATATATGGACATCGA+CGG | - | chr6_1:93943773-93943792 | Msa0899120:intron | 35.0% | |
| TTTCATATATGGACATCGAC+GGG | - | chr6_1:93943774-93943793 | Msa0899120:intron | 35.0% | |
| ! | TTTCTGCAACTTGCTTAACA+GGG | + | chr6_1:93944000-93944019 | None:intergenic | 35.0% |
| ! | ATTTCTGCAACTTGCTTAAC+AGG | + | chr6_1:93944001-93944020 | None:intergenic | 35.0% |
| AGTGTTGTCAATCGTAGATA+GGG | + | chr6_1:93944340-93944359 | None:intergenic | 35.0% | |
| TACGAGTTTCCAGAAAAGTA+CGG | + | chr6_1:93944370-93944389 | None:intergenic | 35.0% | |
| TTTCTTTGACCGTGTCATAA+TGG | - | chr6_1:93944390-93944409 | Msa0899120:intron | 35.0% | |
| CTCCTAAGAAGCTTAAGAAT+AGG | - | chr6_1:93944593-93944612 | Msa0899120:CDS | 35.0% | |
| CTCCTATTCTTAAGCTTCTT+AGG | + | chr6_1:93944598-93944617 | None:intergenic | 35.0% | |
| TTTGTAACAGGACAAGGTAG+TGG | + | chr6_1:93937022-93937041 | None:intergenic | 40.0% | |
| AGAAGAGAAGGGTTTGTAAC+AGG | + | chr6_1:93937034-93937053 | None:intergenic | 40.0% | |
| AAGAAAAAGAGGGAAGAGTG+TGG | + | chr6_1:93937128-93937147 | None:intergenic | 40.0% | |
| GTGGCTGAAGAAGAAAAAGA+GGG | + | chr6_1:93937138-93937157 | None:intergenic | 40.0% | |
| GACCCTTGTTCTTATCTACA+AGG | - | chr6_1:93937234-93937253 | Msa0899120:intron | 40.0% | |
| GGTTGCAAAGTTGGACTTTA+TGG | + | chr6_1:93937266-93937285 | None:intergenic | 40.0% | |
| GTAAAGAACTCACAGAACCA+CGG | + | chr6_1:93937287-93937306 | None:intergenic | 40.0% | |
| CAAACACAGACACAAAAGAG+AGG | + | chr6_1:93937318-93937337 | None:intergenic | 40.0% | |
| ! | CTCTCTTTTGTGTCTGTGTT+TGG | - | chr6_1:93937316-93937335 | Msa0899120:intron | 40.0% |
| GGAAACAATGAGTGTATGCT+TGG | - | chr6_1:93937511-93937530 | Msa0899120:intron | 40.0% | |
| !! | TTTGTATGCGTTTGGTTCTG+CGG | - | chr6_1:93937965-93937984 | Msa0899120:intron | 40.0% |
| ! | TGAGTGAACTCAAGTTTGCT+TGG | + | chr6_1:93938474-93938493 | None:intergenic | 40.0% |
| TCACGTTTCTTGGAGATAAG+TGG | + | chr6_1:93938597-93938616 | None:intergenic | 40.0% | |
| AAGTAGGACATTAGATGGAG+AGG | - | chr6_1:93938676-93938695 | Msa0899120:CDS | 40.0% | |
| GATGAGTGAAGCCGTTAAAA+GGG | + | chr6_1:93938765-93938784 | None:intergenic | 40.0% | |
| AGATGAGTGAAGCCGTTAAA+AGG | + | chr6_1:93938766-93938785 | None:intergenic | 40.0% | |
| TCAAGTTCATGTCCAGCATT+TGG | - | chr6_1:93938850-93938869 | Msa0899120:intron | 40.0% | |
| CAAGTTCATGTCCAGCATTT+GGG | - | chr6_1:93938851-93938870 | Msa0899120:intron | 40.0% | |
| AATTAGACGTGCAATCCCTT+CGG | + | chr6_1:93939054-93939073 | None:intergenic | 40.0% | |
| AAGGAAGTTAGGCAATGGTA+TGG | - | chr6_1:93939193-93939212 | Msa0899120:intron | 40.0% | |
| ATTTCGGTAGCCAACATGAT+TGG | - | chr6_1:93939305-93939324 | Msa0899120:intron | 40.0% | |
| AGCCAACATGATTGGTGAAA+CGG | - | chr6_1:93939313-93939332 | Msa0899120:intron | 40.0% | |
| !! | TTCGTCATGGCGTAGTTTTA+GGG | - | chr6_1:93939405-93939424 | Msa0899120:intron | 40.0% |
| AGTGTATTCTGTGTTGAGTG+GGG | - | chr6_1:93939502-93939521 | Msa0899120:intron | 40.0% | |
| !!! | TTATTGCCCCATTTTTTCGG+TGG | - | chr6_1:93939695-93939714 | Msa0899120:intron | 40.0% |
| ATCCACACCACCGAAAAAAT+GGG | + | chr6_1:93939705-93939724 | None:intergenic | 40.0% | |
| AATCCACACCACCGAAAAAA+TGG | + | chr6_1:93939706-93939725 | None:intergenic | 40.0% | |
| TAGCGACTGTCCTTCAAATT+GGG | - | chr6_1:93939748-93939767 | Msa0899120:intron | 40.0% | |
| TTTCCAAACAACCCACACAT+TGG | + | chr6_1:93939855-93939874 | None:intergenic | 40.0% | |
| ! | GTTCTGTTCCTGTGTAGTTT+TGG | - | chr6_1:93939970-93939989 | Msa0899120:intron | 40.0% |
| TAACAGCACCAAAACTACAC+AGG | + | chr6_1:93939981-93940000 | None:intergenic | 40.0% | |
| TGTGCTTCTTCATGTAGTTC+CGG | - | chr6_1:93940003-93940022 | Msa0899120:intron | 40.0% | |
| CTATACGATGTAACACACCA+AGG | + | chr6_1:93940103-93940122 | None:intergenic | 40.0% | |
| CAATCTTAGCGCCTAAACAA+AGG | + | chr6_1:93940197-93940216 | None:intergenic | 40.0% | |
| ! | CTTTGTTTAGGCGCTAAGAT+TGG | - | chr6_1:93940195-93940214 | Msa0899120:intron | 40.0% |
| !!! | TTTGCTTTTTTCCTTGCGCA+TGG | - | chr6_1:93940240-93940259 | Msa0899120:intron | 40.0% |
| AAAAAGAGTAACCATGCGCA+AGG | + | chr6_1:93940254-93940273 | None:intergenic | 40.0% | |
| GCAGCGTAAGTTTATTGAGA+AGG | - | chr6_1:93940285-93940304 | Msa0899120:intron | 40.0% | |
| GAAGGAAGTTCCAGATTGTA+AGG | - | chr6_1:93940320-93940339 | Msa0899120:CDS | 40.0% | |
| GCTAAGCGAAAAAAACAGCT+AGG | + | chr6_1:93940387-93940406 | None:intergenic | 40.0% | |
| ! | TGGTGCATGTTGCTATCTTT+TGG | - | chr6_1:93940480-93940499 | Msa0899120:CDS | 40.0% |
| ! | TCGCAAGTCTTGTAACTTTG+CGG | - | chr6_1:93940523-93940542 | Msa0899120:CDS | 40.0% |
| !! | GTGTTCGTTTTTCCCAATGA+TGG | - | chr6_1:93941099-93941118 | Msa0899120:intron | 40.0% |
| ATGAAACACAGTGACCAAAG+GGG | + | chr6_1:93941128-93941147 | None:intergenic | 40.0% | |
| CAATGAAACACAGTGACCAA+AGG | + | chr6_1:93941130-93941149 | None:intergenic | 40.0% | |
| TGGCTATGTAATCGAGCATT+TGG | - | chr6_1:93941191-93941210 | Msa0899120:intron | 40.0% | |
| GGCTATGTAATCGAGCATTT+GGG | - | chr6_1:93941192-93941211 | Msa0899120:intron | 40.0% | |
| ! | AGGAGCATATTCCAGGTATA+CGG | - | chr6_1:93941217-93941236 | Msa0899120:intron | 40.0% |
| TGTCAAATGAGGACTTCACA+GGG | + | chr6_1:93941360-93941379 | None:intergenic | 40.0% | |
| TTGTCAAATGAGGACTTCAC+AGG | + | chr6_1:93941361-93941380 | None:intergenic | 40.0% | |
| ! | GAAAACGGGTTTGTCAAATG+AGG | + | chr6_1:93941371-93941390 | None:intergenic | 40.0% |
| !! | TACCCCTTTAAAGTCTTCTG+TGG | - | chr6_1:93941574-93941593 | Msa0899120:intron | 40.0% |
| ! | TGTGGTTTTCAAACACCTCT+TGG | - | chr6_1:93941592-93941611 | Msa0899120:intron | 40.0% |
| GTATGTACGTGTATTCCAAG+AGG | + | chr6_1:93941610-93941629 | None:intergenic | 40.0% | |
| TCGATGCCCAAATCAAATGA+GGG | + | chr6_1:93941851-93941870 | None:intergenic | 40.0% | |
| GTGAGTCTTCAACAACAAGA+AGG | + | chr6_1:93941895-93941914 | None:intergenic | 40.0% | |
| AGGTCACAACAAAGCAAACA+TGG | - | chr6_1:93941990-93942009 | Msa0899120:intron | 40.0% | |
| GGTCACAACAAAGCAAACAT+GGG | - | chr6_1:93941991-93942010 | Msa0899120:intron | 40.0% | |
| AACAAAGCCCCTATTGAAGA+TGG | - | chr6_1:93942064-93942083 | Msa0899120:intron | 40.0% | |
| ACAAAGCCCCTATTGAAGAT+GGG | - | chr6_1:93942065-93942084 | Msa0899120:intron | 40.0% | |
| AGAAGACCCATCTTCAATAG+GGG | + | chr6_1:93942074-93942093 | None:intergenic | 40.0% | |
| ! | AGCTGAGATTGATGAGTTGA+AGG | - | chr6_1:93942246-93942265 | Msa0899120:intron | 40.0% |
| CATGTTTAAGCTCATTCGGT+TGG | + | chr6_1:93942395-93942414 | None:intergenic | 40.0% | |
| ATGCGGTTGTACAATGATGT+TGG | - | chr6_1:93942483-93942502 | Msa0899120:intron | 40.0% | |
| CTGTAACCGATAAGAGCTTT+AGG | + | chr6_1:93942907-93942926 | None:intergenic | 40.0% | |
| ! | AAGCTCTTATCGGTTACAGT+AGG | - | chr6_1:93942908-93942927 | Msa0899120:intron | 40.0% |
| !! | CTCTTTGAAGCATAGGCTTA+TGG | - | chr6_1:93942952-93942971 | Msa0899120:intron | 40.0% |
| TCTCAACATAGCCACTCATA+TGG | + | chr6_1:93942981-93943000 | None:intergenic | 40.0% | |
| AGTGGCTATGTTGAGATAGA+TGG | - | chr6_1:93942985-93943004 | Msa0899120:intron | 40.0% | |
| GTGGCTATGTTGAGATAGAT+GGG | - | chr6_1:93942986-93943005 | Msa0899120:intron | 40.0% | |
| ATCAAGCATTCCAGGATATG+TGG | + | chr6_1:93943052-93943071 | None:intergenic | 40.0% | |
| ACTAGATGATCAAGCATTCC+AGG | + | chr6_1:93943060-93943079 | None:intergenic | 40.0% | |
| ATGCTTGATCATCTAGTTGC+AGG | - | chr6_1:93943063-93943082 | Msa0899120:intron | 40.0% | |
| GCAGTTACACATTATCAGCA+CGG | + | chr6_1:93943192-93943211 | None:intergenic | 40.0% | |
| TCCTGACAATCAATTCCATG+CGG | + | chr6_1:93943324-93943343 | None:intergenic | 40.0% | |
| ACTTAATAGAGATGGACCTG+GGG | + | chr6_1:93943383-93943402 | None:intergenic | 40.0% | |
| ! | CCAATTTTGTGCACTAAAGG+AGG | + | chr6_1:93943437-93943456 | None:intergenic | 40.0% |
| CCTCCTTTAGTGCACAAAAT+TGG | - | chr6_1:93943434-93943453 | Msa0899120:intron | 40.0% | |
| ATATATGAAACAGCGCCAAC+AGG | + | chr6_1:93943764-93943783 | None:intergenic | 40.0% | |
| ! | TGTTGGCGCTGTTTCATATA+TGG | - | chr6_1:93943763-93943782 | Msa0899120:intron | 40.0% |
| TTCATATATGGACATCGACG+GGG | - | chr6_1:93943775-93943794 | Msa0899120:intron | 40.0% | |
| !! | TTTTTCGGCACAAAGCTTTC+TGG | + | chr6_1:93943845-93943864 | None:intergenic | 40.0% |
| !! | AAAGGCACACCTTCGTTTTT+CGG | + | chr6_1:93943860-93943879 | None:intergenic | 40.0% |
| GGAGACGAGGAGAATAAAAT+TGG | + | chr6_1:93943895-93943914 | None:intergenic | 40.0% | |
| TGATCACGACACTACTAGAA+AGG | + | chr6_1:93943916-93943935 | None:intergenic | 40.0% | |
| ATGATCACGACAGCACAATT+TGG | + | chr6_1:93944049-93944068 | None:intergenic | 40.0% | |
| ! | ATTGACTTCCTGTTTCGACA+CGG | - | chr6_1:93944067-93944086 | Msa0899120:intron | 40.0% |
| GTGTTGTCAATCGTAGATAG+GGG | + | chr6_1:93944339-93944358 | None:intergenic | 40.0% | |
| CAGTGTTGTCAATCGTAGAT+AGG | + | chr6_1:93944341-93944360 | None:intergenic | 40.0% | |
| CTATCTACGATTGACAACAC+TGG | - | chr6_1:93944339-93944358 | Msa0899120:intron | 40.0% | |
| ! | TGACCGTGTCATAATGGAAT+TGG | - | chr6_1:93944396-93944415 | Msa0899120:intron | 40.0% |
| GAAGGGTTTGTAACAGGACA+AGG | + | chr6_1:93937028-93937047 | None:intergenic | 45.0% | |
| ! | GATGGAGAGAAAGTGTGAGA+GGG | + | chr6_1:93937090-93937109 | None:intergenic | 45.0% |
| ! | TGATGGAGAGAAAGTGTGAG+AGG | + | chr6_1:93937091-93937110 | None:intergenic | 45.0% |
| GGTGGCTGAAGAAGAAAAAG+AGG | + | chr6_1:93937139-93937158 | None:intergenic | 45.0% | |
| ! | TTTTCTTCTTCAGCCACCAG+TGG | - | chr6_1:93937141-93937160 | Msa0899120:CDS | 45.0% |
| AAAGTCCAACTTTGCAACCG+TGG | - | chr6_1:93937267-93937286 | Msa0899120:intron | 45.0% | |
| CCTCGTGAGCTTAACTCATA+AGG | + | chr6_1:93938639-93938658 | None:intergenic | 45.0% | |
| CCTTATGAGTTAAGCTCACG+AGG | - | chr6_1:93938636-93938655 | Msa0899120:CDS | 45.0% | |
| AGCTTTCATTCTATCGGCAC+TGG | - | chr6_1:93938722-93938741 | Msa0899120:CDS | 45.0% | |
| ATTACTTTCCCTGCTTCCGA+AGG | - | chr6_1:93939035-93939054 | Msa0899120:intron | 45.0% | |
| TTACTTTCCCTGCTTCCGAA+GGG | - | chr6_1:93939036-93939055 | Msa0899120:intron | 45.0% | |
| GTCCGTTTCACCAATCATGT+TGG | + | chr6_1:93939318-93939337 | None:intergenic | 45.0% | |
| ACATGATTGGTGAAACGGAC+AGG | - | chr6_1:93939318-93939337 | Msa0899120:intron | 45.0% | |
| ! | TAGTGTAGTGGAGTTGGAGA+AGG | - | chr6_1:93939348-93939367 | Msa0899120:intron | 45.0% |
| ! | GACTTGGTAGAAGTTCGTCA+TGG | - | chr6_1:93939392-93939411 | Msa0899120:intron | 45.0% |
| ! | GTTCGTCATGGCGTAGTTTT+AGG | - | chr6_1:93939404-93939423 | Msa0899120:intron | 45.0% |
| TATTCTGTGTTGAGTGGGGA+TGG | - | chr6_1:93939506-93939525 | Msa0899120:intron | 45.0% | |
| ! | TCTTTTTGTGTAGGTGGGTG+TGG | - | chr6_1:93939640-93939659 | Msa0899120:intron | 45.0% |
| TCCACACCACCGAAAAAATG+GGG | + | chr6_1:93939704-93939723 | None:intergenic | 45.0% | |
| GTAGCGACTGTCCTTCAAAT+TGG | - | chr6_1:93939747-93939766 | Msa0899120:intron | 45.0% | |
| AGCGACTGTCCTTCAAATTG+GGG | - | chr6_1:93939749-93939768 | Msa0899120:intron | 45.0% | |
| ! | ACTCCAATGTGTGGGTTGTT+TGG | - | chr6_1:93939849-93939868 | Msa0899120:intron | 45.0% |
| ! | CATGTAGTTCCGGTTTGAGT+CGG | - | chr6_1:93940013-93940032 | Msa0899120:intron | 45.0% |
| TTGAGTCGGACTGCTTCTAA+TGG | - | chr6_1:93940027-93940046 | Msa0899120:intron | 45.0% | |
| ! | GCTTCTAATGGTGAGAGTGT+CGG | - | chr6_1:93940039-93940058 | Msa0899120:intron | 45.0% |
| !! | CTTCTAATGGTGAGAGTGTC+GGG | - | chr6_1:93940040-93940059 | Msa0899120:intron | 45.0% |
| !! | TTCTAATGGTGAGAGTGTCG+GGG | - | chr6_1:93940041-93940060 | Msa0899120:intron | 45.0% |
| GCTCTCTCATTCTGTTTCCT+TGG | - | chr6_1:93940083-93940102 | Msa0899120:intron | 45.0% | |
| ! | AGTTTTCTTGTCGGCAGTGT+TGG | - | chr6_1:93940121-93940140 | Msa0899120:intron | 45.0% |
| TAGCTCGCATCCTTACAATC+TGG | + | chr6_1:93940333-93940352 | None:intergenic | 45.0% | |
| AGATCAACAACCCAAGCACA+AGG | + | chr6_1:93940588-93940607 | None:intergenic | 45.0% | |
| TGTAATCGAGCATTTGGGAG+AGG | - | chr6_1:93941197-93941216 | Msa0899120:intron | 45.0% | |
| TATTCCAGGTATACGGAACG+AGG | - | chr6_1:93941224-93941243 | Msa0899120:intron | 45.0% | |
| AATACCTCGTTCCGTATACC+TGG | + | chr6_1:93941231-93941250 | None:intergenic | 45.0% | |
| TGCTTATATACGTGACCGGA+GGG | + | chr6_1:93941485-93941504 | None:intergenic | 45.0% | |
| TTGCTTATATACGTGACCGG+AGG | + | chr6_1:93941486-93941505 | None:intergenic | 45.0% | |
| GTCGATGCCCAAATCAAATG+AGG | + | chr6_1:93941852-93941871 | None:intergenic | 45.0% | |
| GAGTGTTTGTGAAGTTCCAG+AGG | - | chr6_1:93942096-93942115 | Msa0899120:intron | 45.0% | |
| TCCAGAAAAGCTCTCTCACA+TGG | + | chr6_1:93942169-93942188 | None:intergenic | 45.0% | |
| CCAGAGTCCATTGTTTCACT+TGG | + | chr6_1:93942226-93942245 | None:intergenic | 45.0% | |
| ! | CCAAGTGAAACAATGGACTC+TGG | - | chr6_1:93942223-93942242 | Msa0899120:intron | 45.0% |
| GCTTATGGAGTCCATATGAG+TGG | - | chr6_1:93942967-93942986 | Msa0899120:intron | 45.0% | |
| GACTTCTCTTCGCTATCCAT+AGG | + | chr6_1:93943020-93943039 | None:intergenic | 45.0% | |
| CACACGAAATCCACATATCC+TGG | - | chr6_1:93943039-93943058 | Msa0899120:intron | 45.0% | |
| CTTGATCATCTAGTTGCAGG+AGG | - | chr6_1:93943066-93943085 | Msa0899120:intron | 45.0% | |
| AAGGAATGTGAAGAGGAAGC+AGG | - | chr6_1:93943354-93943373 | Msa0899120:intron | 45.0% | |
| CTAAAGGAGGAGAAGGATGA+AGG | + | chr6_1:93943424-93943443 | None:intergenic | 45.0% | |
| TTGTGCACTAAAGGAGGAGA+AGG | + | chr6_1:93943431-93943450 | None:intergenic | 45.0% | |
| !! | CTAAAGTGTCGGTGCTACAT+AGG | + | chr6_1:93943487-93943506 | None:intergenic | 45.0% |
| TCTTGCAGAGCTAAACCTGT+TGG | - | chr6_1:93943746-93943765 | Msa0899120:intron | 45.0% | |
| TCGACGGGGATAGATACAAA+AGG | - | chr6_1:93943789-93943808 | Msa0899120:intron | 45.0% | |
| CGACGGGGATAGATACAAAA+GGG | - | chr6_1:93943790-93943809 | Msa0899120:intron | 45.0% | |
| ! | AGCTTTGTGCCGAAAAACGA+AGG | - | chr6_1:93943848-93943867 | Msa0899120:intron | 45.0% |
| ACACTACTAGAAAGGAGACG+AGG | + | chr6_1:93943908-93943927 | None:intergenic | 45.0% | |
| TTGACTTCCTGTTTCGACAC+GGG | - | chr6_1:93944068-93944087 | Msa0899120:intron | 45.0% | |
| AGAAATACCCGTGTCGAAAC+AGG | + | chr6_1:93944078-93944097 | None:intergenic | 45.0% | |
| ! | TAACACCACTGAGAAGCACA+TGG | + | chr6_1:93944159-93944178 | None:intergenic | 45.0% |
| TATGCACGGTCTCAACTTTG+TGG | - | chr6_1:93944700-93944719 | Msa0899120:CDS | 45.0% | |
| ! | GGGAAGAGTGTGGTTGTTGA+TGG | + | chr6_1:93937118-93937137 | None:intergenic | 50.0% |
| CAGAACCACGGTTGCAAAGT+TGG | + | chr6_1:93937275-93937294 | None:intergenic | 50.0% | |
| ATAGGCTGTTGCAACGAACC+AGG | - | chr6_1:93938940-93938959 | Msa0899120:intron | 50.0% | |
| TAGGCTGTTGCAACGAACCA+GGG | - | chr6_1:93938941-93938960 | Msa0899120:intron | 50.0% | |
| TTGATGGGATCCGTTGTCAG+AGG | - | chr6_1:93939226-93939245 | Msa0899120:intron | 50.0% | |
| TGATGGGATCCGTTGTCAGA+GGG | - | chr6_1:93939227-93939246 | Msa0899120:intron | 50.0% | |
| AAAGGTTCCCCCTCTGACAA+CGG | + | chr6_1:93939239-93939258 | None:intergenic | 50.0% | |
| ACAGGTCCAAGGTAGTGTAG+TGG | - | chr6_1:93939336-93939355 | Msa0899120:intron | 50.0% | |
| CCAACTCCACTACACTACCT+TGG | + | chr6_1:93939345-93939364 | None:intergenic | 50.0% | |
| ! | CCAAGGTAGTGTAGTGGAGT+TGG | - | chr6_1:93939342-93939361 | Msa0899120:intron | 50.0% |
| GCGACTGTCCTTCAAATTGG+GGG | - | chr6_1:93939750-93939769 | Msa0899120:intron | 50.0% | |
| AGAAGCAGTCCGACTCAAAC+CGG | + | chr6_1:93940025-93940044 | None:intergenic | 50.0% | |
| TGAACTCTCAGAGAAGCCTG+CGG | - | chr6_1:93940817-93940836 | Msa0899120:intron | 50.0% | |
| ACGTCGCCCTCAATGACAAA+TGG | + | chr6_1:93940923-93940942 | None:intergenic | 50.0% | |
| CCAAAGGGGCTTCCATCATT+GGG | + | chr6_1:93941114-93941133 | None:intergenic | 50.0% | |
| ACCAAAGGGGCTTCCATCAT+TGG | + | chr6_1:93941115-93941134 | None:intergenic | 50.0% | |
| TCCATTGCTGAAGACAGCTG+AGG | - | chr6_1:93941152-93941171 | Msa0899120:intron | 50.0% | |
| TCCTCAGCTGTCTTCAGCAA+TGG | + | chr6_1:93941156-93941175 | None:intergenic | 50.0% | |
| GATTACATAGCCAAGTGCGC+TGG | + | chr6_1:93941184-93941203 | None:intergenic | 50.0% | |
| ! | TTGGGAGAGGAGCATATTCC+AGG | - | chr6_1:93941210-93941229 | Msa0899120:intron | 50.0% |
| AGGACTTCACAGGGTATAGC+TGG | + | chr6_1:93941351-93941370 | None:intergenic | 50.0% | |
| !! | CGTGCTGCAGCTCCTTATTT+TGG | - | chr6_1:93941403-93941422 | Msa0899120:intron | 50.0% |
| GTTCCAGAGGTCATGCAATC+TGG | - | chr6_1:93942109-93942128 | Msa0899120:intron | 50.0% | |
| CTTCCAGATTGCATGACCTC+TGG | + | chr6_1:93942115-93942134 | None:intergenic | 50.0% | |
| ! | GCCATGTGAGAGAGCTTTTC+TGG | - | chr6_1:93942165-93942184 | Msa0899120:intron | 50.0% |
| CGTGAGAATAGGCAAGGCAT+TGG | + | chr6_1:93942425-93942444 | None:intergenic | 50.0% | |
| CCTTGCCTATTCTCACGTGA+GGG | - | chr6_1:93942428-93942447 | Msa0899120:intron | 50.0% | |
| CTTGCCTATTCTCACGTGAG+GGG | - | chr6_1:93942429-93942448 | Msa0899120:intron | 50.0% | |
| TTGCCTATTCTCACGTGAGG+GGG | - | chr6_1:93942430-93942449 | Msa0899120:intron | 50.0% | |
| GCAGTACATACTACACCCTC+CGG | + | chr6_1:93942639-93942658 | None:intergenic | 50.0% | |
| !! | TAGATGGGCAGAAGCACCTA+TGG | - | chr6_1:93943001-93943020 | Msa0899120:intron | 50.0% |
| TCATCTAGTTGCAGGAGGAC+TGG | - | chr6_1:93943071-93943090 | Msa0899120:intron | 50.0% | |
| GCCGCATGGAATTGATTGTC+AGG | - | chr6_1:93943320-93943339 | Msa0899120:intron | 50.0% | |
| TAACACCAATGTCGGCGTGT+CGG | - | chr6_1:93943581-93943600 | Msa0899120:intron | 50.0% | |
| TTGAGCCATGTGCTTCTCAG+TGG | - | chr6_1:93944151-93944170 | Msa0899120:intron | 50.0% | |
| !!! | CTGGTGCTACCGTACTTTTC+TGG | - | chr6_1:93944358-93944377 | Msa0899120:intron | 50.0% |
| CAGCACGTGCACACTCACAT+GGG | - | chr6_1:93937164-93937183 | Msa0899120:intron | 55.0% | |
| GTGCAATCCCTTCGGAAGCA+GGG | + | chr6_1:93939046-93939065 | None:intergenic | 55.0% | |
| GATGGGATCCGTTGTCAGAG+GGG | - | chr6_1:93939228-93939247 | Msa0899120:intron | 55.0% | |
| ATGGGATCCGTTGTCAGAGG+GGG | - | chr6_1:93939229-93939248 | Msa0899120:intron | 55.0% | |
| TGGTGAAACGGACAGGTCCA+AGG | - | chr6_1:93939325-93939344 | Msa0899120:intron | 55.0% | |
| !! | ATGGCAGTGAGGTGGTGGAT+TGG | - | chr6_1:93939525-93939544 | Msa0899120:intron | 55.0% |
| !! | TGGCAGTGAGGTGGTGGATT+GGG | - | chr6_1:93939526-93939545 | Msa0899120:intron | 55.0% |
| !! | TGAGGTGGTGGATTGGGCTT+CGG | - | chr6_1:93939532-93939551 | Msa0899120:intron | 55.0% |
| !!! | GCCCCATTTTTTCGGTGGTG+TGG | - | chr6_1:93939700-93939719 | Msa0899120:intron | 55.0% |
| GCTCAGAGCCCCCAATTTGA+AGG | + | chr6_1:93939761-93939780 | None:intergenic | 55.0% | |
| !! | TAATGGTGAGAGTGTCGGGG+TGG | - | chr6_1:93940044-93940063 | Msa0899120:intron | 55.0% |
| !! | AATGGTGAGAGTGTCGGGGT+GGG | - | chr6_1:93940045-93940064 | Msa0899120:intron | 55.0% |
| ! | AGAAGGGTTGGCAGCAGTGA+AGG | - | chr6_1:93940302-93940321 | Msa0899120:CDS | 55.0% |
| ACCCAAGCACAAGGCATGCA+CGG | + | chr6_1:93940579-93940598 | None:intergenic | 55.0% | |
| GAACTCTCAGAGAAGCCTGC+GGG | - | chr6_1:93940818-93940837 | Msa0899120:intron | 55.0% | |
| GTCATTGAGGGCGACGTTGT+TGG | - | chr6_1:93940926-93940945 | Msa0899120:intron | 55.0% | |
| ! | CCCAATGATGGAAGCCCCTT+TGG | - | chr6_1:93941111-93941130 | Msa0899120:intron | 55.0% |
| GAGGAAAGAACCAGCGCACT+TGG | - | chr6_1:93941171-93941190 | Msa0899120:intron | 55.0% | |
| GCCTTGCCTATTCTCACGTG+AGG | - | chr6_1:93942427-93942446 | Msa0899120:intron | 55.0% | |
| CCCTCACGTGAGAATAGGCA+AGG | + | chr6_1:93942431-93942450 | None:intergenic | 55.0% | |
| TGCCTATTCTCACGTGAGGG+GGG | - | chr6_1:93942431-93942450 | Msa0899120:intron | 55.0% | |
| TTCCCCCCTCACGTGAGAAT+AGG | + | chr6_1:93942436-93942455 | None:intergenic | 55.0% | |
| TTGCTACTGTTGCAGCCGCA+TGG | - | chr6_1:93943306-93943325 | Msa0899120:intron | 55.0% | |
| AAGAGGAAGCAGGAATCCCC+AGG | - | chr6_1:93943364-93943383 | Msa0899120:intron | 55.0% | |
| GCAGCACGTGCACACTCACA+TGG | - | chr6_1:93937163-93937182 | Msa0899120:intron | 60.0% | |
| CGACTCGACAACGTTTGCCC+TGG | + | chr6_1:93938961-93938980 | None:intergenic | 60.0% | |
| CGTGCAATCCCTTCGGAAGC+AGG | + | chr6_1:93939047-93939066 | None:intergenic | 60.0% | |
| GTTGAGTGGGGATGGCAGTG+AGG | - | chr6_1:93939514-93939533 | Msa0899120:intron | 60.0% | |
| TCCCGTGCATGCCTTGTGCT+TGG | - | chr6_1:93940574-93940593 | Msa0899120:CDS | 60.0% | |
| CCCAAGCACAAGGCATGCAC+GGG | + | chr6_1:93940578-93940597 | None:intergenic | 60.0% | |
| CCCGTGCATGCCTTGTGCTT+GGG | - | chr6_1:93940575-93940594 | Msa0899120:CDS | 60.0% | |
| AGACACCGACACGCCGACAT+TGG | + | chr6_1:93943589-93943608 | None:intergenic | 60.0% | |
| TGTGCACGTGCTGCCACTGG+TGG | + | chr6_1:93937157-93937176 | None:intergenic | 65.0% | |
| GAGTGTGCACGTGCTGCCAC+TGG | + | chr6_1:93937160-93937179 | None:intergenic | 65.0% | |
| GAGTGGGGATGGCAGTGAGG+TGG | - | chr6_1:93939517-93939536 | Msa0899120:intron | 65.0% | |
| TGGGGATGGCAGTGAGGTGG+TGG | - | chr6_1:93939520-93939539 | Msa0899120:intron | 65.0% | |
| !! | GTGAGAGTGTCGGGGTGGGT+TGG | - | chr6_1:93940049-93940068 | Msa0899120:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 93936922 | 93944801 | 93936922 | ID=Msa0899120;Name=Msa0899120 |
| chr6_1 | mRNA | 93936922 | 93944801 | 93936922 | ID=Msa0899120-mRNA-1;Parent=Msa0899120;Name=Msa0899120-mRNA-1;_AED=0.17;_eAED=0.17;_QI=36|1|1|1|0.66|0.6|10|173|383 |
| chr6_1 | exon | 93936922 | 93937164 | 93936922 | ID=Msa0899120-mRNA-1:exon:15989;Parent=Msa0899120-mRNA-1 |
| chr6_1 | exon | 93937634 | 93937754 | 93937634 | ID=Msa0899120-mRNA-1:exon:15988;Parent=Msa0899120-mRNA-1 |
| chr6_1 | exon | 93937854 | 93937969 | 93937854 | ID=Msa0899120-mRNA-1:exon:15987;Parent=Msa0899120-mRNA-1 |
| chr6_1 | exon | 93938323 | 93938402 | 93938323 | ID=Msa0899120-mRNA-1:exon:15986;Parent=Msa0899120-mRNA-1 |
| chr6_1 | exon | 93938631 | 93938756 | 93938631 | ID=Msa0899120-mRNA-1:exon:15985;Parent=Msa0899120-mRNA-1 |
| chr6_1 | exon | 93940291 | 93940371 | 93940291 | ID=Msa0899120-mRNA-1:exon:15984;Parent=Msa0899120-mRNA-1 |
| chr6_1 | exon | 93940478 | 93940655 | 93940478 | ID=Msa0899120-mRNA-1:exon:15983;Parent=Msa0899120-mRNA-1 |
| chr6_1 | exon | 93940760 | 93940824 | 93940760 | ID=Msa0899120-mRNA-1:exon:15982;Parent=Msa0899120-mRNA-1 |
| chr6_1 | exon | 93944430 | 93944730 | 93944430 | ID=Msa0899120-mRNA-1:exon:15981;Parent=Msa0899120-mRNA-1 |
| chr6_1 | exon | 93944752 | 93944801 | 93944752 | ID=Msa0899120-mRNA-1:exon:15980;Parent=Msa0899120-mRNA-1 |
| chr6_1 | five_prime_UTR | 93944766 | 93944801 | 93944766 | ID=Msa0899120-mRNA-1:five_prime_utr;Parent=Msa0899120-mRNA-1 |
| chr6_1 | CDS | 93944752 | 93944765 | 93944752 | ID=Msa0899120-mRNA-1:cds;Parent=Msa0899120-mRNA-1 |
| chr6_1 | CDS | 93944430 | 93944730 | 93944430 | ID=Msa0899120-mRNA-1:cds;Parent=Msa0899120-mRNA-1 |
| chr6_1 | CDS | 93940760 | 93940824 | 93940760 | ID=Msa0899120-mRNA-1:cds;Parent=Msa0899120-mRNA-1 |
| chr6_1 | CDS | 93940478 | 93940655 | 93940478 | ID=Msa0899120-mRNA-1:cds;Parent=Msa0899120-mRNA-1 |
| chr6_1 | CDS | 93940291 | 93940371 | 93940291 | ID=Msa0899120-mRNA-1:cds;Parent=Msa0899120-mRNA-1 |
| chr6_1 | CDS | 93938631 | 93938756 | 93938631 | ID=Msa0899120-mRNA-1:cds;Parent=Msa0899120-mRNA-1 |
| chr6_1 | CDS | 93938323 | 93938402 | 93938323 | ID=Msa0899120-mRNA-1:cds;Parent=Msa0899120-mRNA-1 |
| chr6_1 | CDS | 93937854 | 93937969 | 93937854 | ID=Msa0899120-mRNA-1:cds;Parent=Msa0899120-mRNA-1 |
| chr6_1 | CDS | 93937634 | 93937754 | 93937634 | ID=Msa0899120-mRNA-1:cds;Parent=Msa0899120-mRNA-1 |
| chr6_1 | CDS | 93937095 | 93937164 | 93937095 | ID=Msa0899120-mRNA-1:cds;Parent=Msa0899120-mRNA-1 |
| chr6_1 | three_prime_UTR | 93936922 | 93937094 | 93936922 | ID=Msa0899120-mRNA-1:three_prime_utr;Parent=Msa0899120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
