AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1267390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1267390 MtrunA17_Chr4g0076791 84.783 184 8 6 1 179 1 169 1.18e-101 295
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1267390 AT2G02500.1 65.306 98 32 1 92 189 82 177 3.07e-41 141
Msa1267390 AT2G02500.2 65.306 98 32 1 92 189 82 177 3.07e-41 141

Find 124 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCTCTTCCTCTTCTTC+TGG 0.093616 8_2:-72580500 Msa1267390:CDS
AAAATGTGTCTTTGGAAAAT+TGG 0.101200 8_2:-72579257 Msa1267390:three_prime_UTR
CATTCAACAATCCATCTTTA+AGG 0.143755 8_2:+72578250 None:intergenic
GCTAGATATCATAGAGTTAA+TGG 0.233892 8_2:+72579211 None:intergenic
TAGATATCAAAATGTGTCTT+TGG 0.271556 8_2:-72579265 Msa1267390:three_prime_UTR
TTGAATGGAGCTGCTGTTCT+TGG 0.281782 8_2:-72578234 Msa1267390:three_prime_UTR
TAGTTAATAAATTGGCATTC+TGG 0.282856 8_2:-72579129 Msa1267390:three_prime_UTR
AAATGTGTCTTTGGAAAATT+GGG 0.287322 8_2:-72579256 Msa1267390:three_prime_UTR
GGATGATATTTAATCAAGTT+TGG 0.290779 8_2:-72574839 Msa1267390:three_prime_UTR
CAAACACATAGTTAATAAAT+TGG 0.290904 8_2:-72579137 Msa1267390:three_prime_UTR
GTTACAAGAAGATGTGAAAA+AGG 0.291390 8_2:-72578799 Msa1267390:intron
TCTTCTCTTCCTCTTCTTCT+GGG 0.292050 8_2:-72580499 Msa1267390:CDS
TTCAGTGTTGAAACATTATT+AGG 0.293443 8_2:-72579188 Msa1267390:three_prime_UTR
TGATATAAACAGGATGTTTA+AGG 0.309094 8_2:+72576201 None:intergenic
AGAATATTGAATATAAATTC+TGG 0.325941 8_2:-72575101 Msa1267390:three_prime_UTR
TCAGCTAATGATCATTGTTT+TGG 0.332975 8_2:+72579463 None:intergenic
TTCTGTTTACAATGGCCTTC+AGG 0.333766 8_2:-72579609 Msa1267390:CDS
GTCTGGTTGGCAATTTCCTT+TGG 0.336442 8_2:+72579667 None:intergenic
AAGGCTTTGAGCTTGTAAAT+AGG 0.349441 8_2:-72576533 Msa1267390:intron
ATGCATTTAATAATAATATA+AGG 0.371173 8_2:+72578887 None:intergenic
TCCTTGATTGTGGCCTTCAC+AGG 0.375394 8_2:+72578207 None:intergenic
TTTCCCTTCAATGGTGAGAT+TGG 0.375566 8_2:+72575055 None:intergenic
CAATTTATTAACTATGTGTT+TGG 0.378622 8_2:+72579138 None:intergenic
TTAACCAAATGGCAAGATTC+GGG 0.380900 8_2:+72579430 None:intergenic
TCCTACAACGACATCTTTCA+AGG 0.389033 8_2:-72579786 Msa1267390:intron
TTTACTTGGGCGGTGGGAAG+TGG 0.392564 8_2:+72580248 None:intergenic
AAAGCAATATCTTCCTCTCT+TGG 0.394637 8_2:-72579968 Msa1267390:CDS
GTTAACCAAATGGCAAGATT+CGG 0.395853 8_2:+72579429 None:intergenic
AAGATTAATTAACTGTTGTC+AGG 0.397528 8_2:-72579031 Msa1267390:three_prime_UTR
CAAACCCGAATCTTGCCATT+TGG 0.397642 8_2:-72579434 Msa1267390:three_prime_UTR
GTTGTAAGAGATTTGATTGT+TGG 0.413235 8_2:+72580466 None:intergenic
GGCAGTGCAAATTTGAGGTC+TGG 0.415366 8_2:+72579650 None:intergenic
GATCCTTCGGTGATATAAAC+AGG 0.418697 8_2:+72576191 None:intergenic
GACCTCAAATTTGCACTGCC+TGG 0.426209 8_2:-72579647 Msa1267390:CDS
TTCCAGGCAGTGCAAATTTG+AGG 0.431618 8_2:+72579645 None:intergenic
TGACAATGATTTCCCTTCAA+TGG 0.442828 8_2:+72575046 None:intergenic
CTTAAAGATGGATTGTTGAA+TGG 0.444390 8_2:-72578249 Msa1267390:three_prime_UTR
TGGAGGGAAGGGCAAGAGAA+TGG 0.444644 8_2:-72580074 Msa1267390:CDS
AACAGTTAATTAATCTTACA+TGG 0.448927 8_2:+72579037 None:intergenic
CATCCCATTGCATGGGGCAC+TGG 0.449643 8_2:+72574857 None:intergenic
TAGAAATTTATTGAAAATGC+GGG 0.452407 8_2:+72579103 None:intergenic
TAAGGAGCCATGAGTGTTAA+CGG 0.456731 8_2:+72578905 None:intergenic
AAACAGACTGTTCAAAATGT+TGG 0.457728 8_2:-72579063 Msa1267390:three_prime_UTR
ACATCTTCTTGTAACACTAA+AGG 0.457853 8_2:+72578807 None:intergenic
GAATATTGAATATAAATTCT+GGG 0.460313 8_2:-72575100 Msa1267390:three_prime_UTR
TTTGCCAATCTCACCATTGA+AGG 0.469458 8_2:-72575059 Msa1267390:three_prime_UTR
TATAAAATTGAGCTAAAGAA+AGG 0.470769 8_2:+72579524 None:intergenic
TGTACTGCTCGCTGGAGGGA+AGG 0.473433 8_2:-72580086 Msa1267390:CDS
CCCTGTGAAGGCCACAATCA+AGG 0.478877 8_2:-72578208 Msa1267390:three_prime_UTR
GATGTTGGTATAAGATCCTT+CGG 0.478970 8_2:+72576178 None:intergenic
TTCTTTGACTTGAAGCATGC+GGG 0.479021 8_2:+72579830 None:intergenic
GGAGGGAAGGGCAAGAGAAT+GGG 0.479045 8_2:-72580073 Msa1267390:CDS
AAGTTTGGCAAACATGATAA+AGG 0.480202 8_2:-72574824 Msa1267390:three_prime_UTR
AAGCAATATCTTCCTCTCTT+GGG 0.480844 8_2:-72579967 Msa1267390:CDS
TTGTAAGAGATTTGATTGTT+GGG 0.483226 8_2:+72580467 None:intergenic
TCTGCTAGTAATAAATCATC+AGG 0.483357 8_2:+72575125 None:intergenic
TTACCAGTGCCCCATGCAAT+GGG 0.484640 8_2:-72574860 Msa1267390:three_prime_UTR
AAGAGAGGAAGATATTGCTT+TGG 0.484756 8_2:+72579970 None:intergenic
TTGTTGTTTATAGATATTTG+AGG 0.495140 8_2:+72580329 None:intergenic
ATTACCAGTGCCCCATGCAA+TGG 0.495295 8_2:-72574861 Msa1267390:three_prime_UTR
AAGGAGCCATGAGTGTTAAC+GGG 0.497401 8_2:+72578906 None:intergenic
AAGCCTTTCCTCAGCAACTC+GGG 0.500793 8_2:+72576549 None:intergenic
ACAACTACAACTACAGCTAC+AGG 0.503881 8_2:-72580448 Msa1267390:CDS
GTATGGGCACGTTAACCAAA+TGG 0.514182 8_2:+72579419 None:intergenic
ACCTTGAAAGATGTCGTTGT+AGG 0.518450 8_2:+72579785 None:intergenic
TCCGTTGTACTGCTCGCTGG+AGG 0.520002 8_2:-72580091 Msa1267390:CDS
TTAGAAATTTATTGAAAATG+CGG 0.522024 8_2:+72579102 None:intergenic
TGTTCTTGGTGTCCCTGTGA+AGG 0.523023 8_2:-72578220 Msa1267390:three_prime_UTR
GTTTATCCCGTTAACACTCA+TGG 0.523921 8_2:-72578912 Msa1267390:three_prime_UTR
TTAAATATCATCCCATTGCA+TGG 0.524143 8_2:+72574849 None:intergenic
GGCAAACACCGAATCATTTG+TGG 0.525156 8_2:-72576712 Msa1267390:three_prime_UTR
ACGTACCTATAGAGTGCAAT+GGG 0.526287 8_2:+72579940 None:intergenic
AAGAGATTTGATTGTTGGGA+AGG 0.526441 8_2:+72580471 None:intergenic
GTTTCTGCAGGAACAGGAGA+AGG 0.526926 8_2:-72580140 Msa1267390:intron
TGTTCTGACCACAAATGATT+CGG 0.528120 8_2:+72576704 None:intergenic
GTCTCCGTTGTACTGCTCGC+TGG 0.529677 8_2:-72580094 Msa1267390:CDS
TAGTTAGTTTACTTGGGCGG+TGG 0.529919 8_2:+72580241 None:intergenic
AAAGCCTTTCCTCAGCAACT+CGG 0.529936 8_2:+72576548 None:intergenic
GCCAACCCATTGCACTCTAT+AGG 0.532866 8_2:-72579945 Msa1267390:intron
ATCATTTGTGGTCAGAACAC+TGG 0.533413 8_2:-72576700 Msa1267390:three_prime_UTR
GTACTGCTCGCTGGAGGGAA+GGG 0.538751 8_2:-72580085 Msa1267390:CDS
TAAATATCATCCCATTGCAT+GGG 0.545245 8_2:+72574850 None:intergenic
AGAGATTTGATTGTTGGGAA+GGG 0.547132 8_2:+72580472 None:intergenic
CAGTAAATATAGAAATGTCT+AGG 0.557824 8_2:-72579365 Msa1267390:three_prime_UTR
AAGGGCAATCCCAGAAGAAG+AGG 0.559832 8_2:+72580490 None:intergenic
GTGCAAATTTGAGGTCTGGT+TGG 0.560440 8_2:+72579654 None:intergenic
TTGCCAATCTCACCATTGAA+GGG 0.564403 8_2:-72575058 Msa1267390:three_prime_UTR
TACTGACGATGTTTCCATTG+TGG 0.566054 8_2:-72576228 Msa1267390:three_prime_UTR
CCTTGATTGTGGCCTTCACA+GGG 0.566587 8_2:+72578208 None:intergenic
ATAGTTGACTACCTTGATGT+TGG 0.566657 8_2:+72576163 None:intergenic
AGAGGTATGAAAAGAAACTC+TGG 0.567436 8_2:+72579491 None:intergenic
ACTGAATACCTCCTTGATTG+TGG 0.574579 8_2:+72578197 None:intergenic
AGCAGCAGCATAACATATTG+AGG 0.575565 8_2:+72580280 None:intergenic
ACCTATAGAGTGCAATGGGT+TGG 0.578481 8_2:+72579944 None:intergenic
AGTTAGTTTACTTGGGCGGT+GGG 0.578835 8_2:+72580242 None:intergenic
ACTGCCTGGAAAAGAAAGAC+AGG 0.579109 8_2:-72579633 Msa1267390:CDS
CCGTTGTACTGCTCGCTGGA+GGG 0.579349 8_2:-72580090 Msa1267390:CDS
ATGGGAGATGCAGACTCCAC+AGG 0.579587 8_2:-72576664 Msa1267390:intron
TACGTACCTATAGAGTGCAA+TGG 0.580532 8_2:+72579939 None:intergenic
AGACATTTCTATATTTACTG+TGG 0.586923 8_2:+72579368 None:intergenic
CTTTGGAAAATTGGGGAGCA+CGG 0.589340 8_2:-72579248 Msa1267390:three_prime_UTR
AGGAAGATATTGCTTTGGCA+TGG 0.591255 8_2:+72579975 None:intergenic
TGAAAGATGTCGTTGTAGGA+AGG 0.591296 8_2:+72579789 None:intergenic
AGATTAATTAACTGTTGTCA+GGG 0.593240 8_2:-72579030 Msa1267390:three_prime_UTR
AATATTGAATATAAATTCTG+GGG 0.599667 8_2:-72575099 Msa1267390:three_prime_UTR
TTGAAACATTATTAGGACAC+AGG 0.600360 8_2:-72579181 Msa1267390:three_prime_UTR
AGAAAACAGCACATTCCTGA+AGG 0.603136 8_2:+72579594 None:intergenic
ATGTTTAAGGTGCTCCACAA+TGG 0.606587 8_2:+72576214 None:intergenic
AAAAGGGAAATGTTTCCGCA+TGG 0.608233 8_2:-72574902 Msa1267390:three_prime_UTR
CCCTCCAGCGAGCAGTACAA+CGG 0.611991 8_2:+72580090 None:intergenic
AGGATCTTATACCAACATCA+AGG 0.612493 8_2:-72576174 Msa1267390:intron
GCAATGGGTTGGCCCAAGAG+AGG 0.612871 8_2:+72579955 None:intergenic
TTTCTTTGACTTGAAGCATG+CGG 0.613225 8_2:+72579829 None:intergenic
AAACCCGAGTTGCTGAGGAA+AGG 0.625305 8_2:-72576552 Msa1267390:three_prime_UTR
CATCCTGTTTATATCACCGA+AGG 0.627709 8_2:-72576194 Msa1267390:three_prime_UTR
AGACAGGATTCTGTTTACAA+TGG 0.632163 8_2:-72579617 Msa1267390:CDS
TTATCAAACCCGAGTTGCTG+AGG 0.632450 8_2:-72576557 Msa1267390:three_prime_UTR
GAGATTTGTGTAAAAGCACA+TGG 0.633575 8_2:-72574937 Msa1267390:three_prime_UTR
AGTTAGTTAGTTTACTTGGG+CGG 0.642157 8_2:+72580238 None:intergenic
CCCCTCCCCTCAGATGCCAA+AGG 0.647197 8_2:-72579683 Msa1267390:intron
AAATATCATCCCATTGCATG+GGG 0.663493 8_2:+72574851 None:intergenic
AGTAGATTTCTTCTACCATG+CGG 0.673412 8_2:+72574887 None:intergenic
AATGTGTCTTTGGAAAATTG+GGG 0.713182 8_2:-72579255 Msa1267390:three_prime_UTR
TGTGAAGGCCACAATCAAGG+AGG 0.756192 8_2:-72578205 Msa1267390:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAATAATAATATTAAT+AGG + chr8_2:72575624-72575643 None:intergenic 0.0%
!! AATTTCTTCTTATTATAAAT+AGG - chr8_2:72575329-72575348 Msa1267390:intron 10.0%
!! ATGCATTTAATAATAATATA+AGG + chr8_2:72576446-72576465 None:intergenic 10.0%
!! ATTTCTTATAAAGTAAATAT+AGG - chr8_2:72577745-72577764 Msa1267390:intron 10.0%
!!! ATGTATATTTCATTTAATTT+TGG - chr8_2:72578708-72578727 Msa1267390:intron 10.0%
!! ATTTAAAAAATTAATTGACT+TGG - chr8_2:72580029-72580048 Msa1267390:intron 10.0%
!!! AAATTTATATATTTTGTATC+AGG + chr8_2:72580159-72580178 None:intergenic 10.0%
!! GATTGATTAATGTTATAAAA+AGG + chr8_2:72575309-72575328 None:intergenic 15.0%
!! TAAGTTAAATTGTAAAGAAA+TGG + chr8_2:72575448-72575467 None:intergenic 15.0%
!! TTAGAAATTTATTGAAAATG+CGG + chr8_2:72576231-72576250 None:intergenic 15.0%
!! AGTTTGCATAAATAAAAATT+GGG - chr8_2:72576352-72576371 Msa1267390:intron 15.0%
!!! TTATTAAATGCATTTTTTAC+AGG - chr8_2:72576453-72576472 Msa1267390:intron 15.0%
!! TAAAATTCAGAAAAATTAAG+CGG + chr8_2:72576599-72576618 None:intergenic 15.0%
!! TATAGATAAGTAATATAAGT+AGG + chr8_2:72577046-72577065 None:intergenic 15.0%
!! AAAAATAAAACAAACAAAAG+AGG - chr8_2:72577233-72577252 Msa1267390:intron 15.0%
!! TATTTACTTTATAAGAAATG+AGG + chr8_2:72577744-72577763 None:intergenic 15.0%
!! TTAAAGAAATGAAAAATAGA+AGG - chr8_2:72577890-72577909 Msa1267390:intron 15.0%
!! AAACATTATACAAAAAATAG+AGG - chr8_2:72578020-72578039 Msa1267390:intron 15.0%
!! AGTATTTCTTCAATAAAAAA+AGG + chr8_2:72579488-72579507 None:intergenic 15.0%
!! AATTTGGATAAATAACTAAA+GGG + chr8_2:72579764-72579783 None:intergenic 15.0%
!! ATAATTCTATCTAATCTAAT+GGG + chr8_2:72579849-72579868 None:intergenic 15.0%
!! TTAAATAGTATACATGATTT+AGG + chr8_2:72579978-72579997 None:intergenic 15.0%
!! AGAATATTGAATATAAATTC+TGG - chr8_2:72580229-72580248 Msa1267390:intron 15.0%
!! GAATATTGAATATAAATTCT+GGG - chr8_2:72580230-72580249 Msa1267390:intron 15.0%
!! AATATTGAATATAAATTCTG+GGG - chr8_2:72580231-72580250 Msa1267390:intron 15.0%
!!! TTGTTGTTTATAGATATTTG+AGG + chr8_2:72575004-72575023 None:intergenic 20.0%
!! AATAATATTAATAGGCAAGA+GGG + chr8_2:72575616-72575635 None:intergenic 20.0%
!! TAATAATATTAATAGGCAAG+AGG + chr8_2:72575617-72575636 None:intergenic 20.0%
!! TATAAAATTGAGCTAAAGAA+AGG + chr8_2:72575809-72575828 None:intergenic 20.0%
!!! GCTCAATTTTATATTAATTC+AGG - chr8_2:72575816-72575835 Msa1267390:intron 20.0%
!! TATGTCTGATAAAAATGTAT+GGG + chr8_2:72575930-72575949 None:intergenic 20.0%
!! ATATGTCTGATAAAAATGTA+TGG + chr8_2:72575931-72575950 None:intergenic 20.0%
!!! CATTTTTATCAGACATATTT+TGG - chr8_2:72575933-72575952 Msa1267390:intron 20.0%
!! CAATTTATTAACTATGTGTT+TGG + chr8_2:72576195-72576214 None:intergenic 20.0%
!! CAAACACATAGTTAATAAAT+TGG - chr8_2:72576193-72576212 Msa1267390:three_prime_UTR 20.0%
!! TAGAAATTTATTGAAAATGC+GGG + chr8_2:72576230-72576249 None:intergenic 20.0%
!! AACAGTTAATTAATCTTACA+TGG + chr8_2:72576296-72576315 None:intergenic 20.0%
!! GAGTTTGCATAAATAAAAAT+TGG - chr8_2:72576351-72576370 Msa1267390:intron 20.0%
!! TACATTTATGTTATTGTCAA+TGG - chr8_2:72576728-72576747 Msa1267390:intron 20.0%
!!! CTTATCTATATTCTGTTTTA+AGG - chr8_2:72577056-72577075 Msa1267390:intron 20.0%
!! ATAACTATTAACTAATGTCT+AGG + chr8_2:72577493-72577512 None:intergenic 20.0%
!! CTCAATATTCCAAAATAAAA+CGG + chr8_2:72577951-72577970 None:intergenic 20.0%
!!! TTTTATTTTGGAATATTGAG+TGG - chr8_2:72577951-72577970 Msa1267390:intron 20.0%
!!! TTTATTTTGGAATATTGAGT+GGG - chr8_2:72577952-72577971 Msa1267390:intron 20.0%
!!! TAATTTGCAAGGAAAATAAT+GGG + chr8_2:72578226-72578245 None:intergenic 20.0%
!!! TATTTTTGTTTGTTCATACT+TGG - chr8_2:72578439-72578458 Msa1267390:intron 20.0%
!! TTCATAAATAACTGAAGAAT+AGG + chr8_2:72578862-72578881 None:intergenic 20.0%
!!! TAAAGCTTTGTAAGTAATAA+AGG + chr8_2:72579218-72579237 None:intergenic 20.0%
!!! TGTTCATATTAGTTGTTTTT+AGG - chr8_2:72579444-72579463 Msa1267390:three_prime_UTR 20.0%
!! TACTTATTATATGAGAAGTT+AGG + chr8_2:72579531-72579550 None:intergenic 20.0%
!!! ATTTGTTAAGGAATCAAAAA+AGG + chr8_2:72579716-72579735 None:intergenic 20.0%
!! GAATTTGGATAAATAACTAA+AGG + chr8_2:72579765-72579784 None:intergenic 20.0%
!! CATAATTCTATCTAATCTAA+TGG + chr8_2:72579850-72579869 None:intergenic 20.0%
!! CATTAGATTAGATAGAATTA+TGG - chr8_2:72579848-72579867 Msa1267390:intron 20.0%
!! GGATAGTTAATATGTTAAAA+AGG + chr8_2:72579932-72579951 None:intergenic 20.0%
!!! TTCTTTTTGACAAATGATTT+AGG + chr8_2:72579953-72579972 None:intergenic 20.0%
! TTGTAAGAGATTTGATTGTT+GGG + chr8_2:72574866-72574885 None:intergenic 25.0%
! TTGAATTGAATCGAATTGAA+TGG + chr8_2:72575127-72575146 None:intergenic 25.0%
! AATTCAATTACTCTACTATG+AGG - chr8_2:72575140-72575159 Msa1267390:intron 25.0%
! AGACATTTCTATATTTACTG+TGG + chr8_2:72575965-72575984 None:intergenic 25.0%
! CAGTAAATATAGAAATGTCT+AGG - chr8_2:72575965-72575984 Msa1267390:intron 25.0%
! TAGATATCAAAATGTGTCTT+TGG - chr8_2:72576065-72576084 Msa1267390:intron 25.0%
!! AAAATGTGTCTTTGGAAAAT+TGG - chr8_2:72576073-72576092 Msa1267390:intron 25.0%
!! AAATGTGTCTTTGGAAAATT+GGG - chr8_2:72576074-72576093 Msa1267390:intron 25.0%
!! TTCAGTGTTGAAACATTATT+AGG - chr8_2:72576142-72576161 Msa1267390:intron 25.0%
! TAGTTAATAAATTGGCATTC+TGG - chr8_2:72576201-72576220 Msa1267390:three_prime_UTR 25.0%
! AAGATTAATTAACTGTTGTC+AGG - chr8_2:72576299-72576318 Msa1267390:intron 25.0%
! AGATTAATTAACTGTTGTCA+GGG - chr8_2:72576300-72576319 Msa1267390:intron 25.0%
! GTTATTGTCAATGGTTTATA+TGG - chr8_2:72576737-72576756 Msa1267390:intron 25.0%
!! ATGTGTCTGTACATTTTTAA+TGG - chr8_2:72576923-72576942 Msa1267390:intron 25.0%
!! AATGCACATTTGACATATTT+TGG - chr8_2:72576951-72576970 Msa1267390:intron 25.0%
!!! ACATTTGACATATTTTGGAT+AGG - chr8_2:72576956-72576975 Msa1267390:intron 25.0%
!!! CATTTGACATATTTTGGATA+GGG - chr8_2:72576957-72576976 Msa1267390:intron 25.0%
! GATAAGTAATATAAGTAGGT+AGG + chr8_2:72577042-72577061 None:intergenic 25.0%
! TTTCTTACGATTATTGTAAG+TGG - chr8_2:72577173-72577192 Msa1267390:intron 25.0%
!!! CTTAACCATTTTCAAGAAAA+AGG - chr8_2:72577265-72577284 Msa1267390:intron 25.0%
!!! TTGAAGGATTTTATTTTCAC+TGG + chr8_2:72577299-72577318 None:intergenic 25.0%
! ATATAGGATACGATACATTT+AGG - chr8_2:72577761-72577780 Msa1267390:intron 25.0%
! ACTTAAGAAAAAGAAGACAT+CGG - chr8_2:72577920-72577939 Msa1267390:intron 25.0%
!! CTAATTTGCAAGGAAAATAA+TGG + chr8_2:72578227-72578246 None:intergenic 25.0%
!!! ATTAATTGTGCAAAAGTACT+TGG + chr8_2:72578299-72578318 None:intergenic 25.0%
! TGAAATTATCAATTTGAGCT+TGG - chr8_2:72578520-72578539 Msa1267390:intron 25.0%
! GAAATTATCAATTTGAGCTT+GGG - chr8_2:72578521-72578540 Msa1267390:intron 25.0%
!!! ATTATTTTCAAGTCCATCAA+GGG + chr8_2:72578572-72578591 None:intergenic 25.0%
!!! AAACTTGTTACTACATATTC+TGG + chr8_2:72578974-72578993 None:intergenic 25.0%
!! GTAACAAGTTTAGAGAATTT+TGG - chr8_2:72578983-72579002 Msa1267390:three_prime_UTR 25.0%
!!! AGAATTTTGGTTTCATCATT+CGG - chr8_2:72578996-72579015 Msa1267390:three_prime_UTR 25.0%
! TGATATAAACAGGATGTTTA+AGG + chr8_2:72579132-72579151 None:intergenic 25.0%
! AACCTGTAACTTATATCATT+TGG - chr8_2:72579239-72579258 Msa1267390:three_prime_UTR 25.0%
! TACCAAATGATATAAGTTAC+AGG + chr8_2:72579244-72579263 None:intergenic 25.0%
! AGTTCTTTCAAACATTGATA+CGG + chr8_2:72579404-72579423 None:intergenic 25.0%
! TGTAAAAAACATAACTTCAG+TGG + chr8_2:72580109-72580128 None:intergenic 25.0%
!!! ATTGATTTTTGAACTGCAAA+AGG - chr8_2:72580329-72580348 Msa1267390:CDS 25.0%
! GGATGATATTTAATCAAGTT+TGG - chr8_2:72580491-72580510 Msa1267390:CDS 25.0%
GTTGTAAGAGATTTGATTGT+TGG + chr8_2:72574867-72574886 None:intergenic 30.0%
! AGGAGTTAGTTAGTTTACTT+GGG + chr8_2:72575098-72575117 None:intergenic 30.0%
TGAATCGAATTGAATGGAAA+AGG + chr8_2:72575121-72575140 None:intergenic 30.0%
TGTAGAAACTGCAAGATATA+AGG + chr8_2:72575474-72575493 None:intergenic 30.0%
AAAGACATGACATAGTGTTA+TGG + chr8_2:72575593-72575612 None:intergenic 30.0%
!!! CTAATGATCATTGTTTTGGA+AGG + chr8_2:72575866-72575885 None:intergenic 30.0%
! TCAGCTAATGATCATTGTTT+TGG + chr8_2:72575870-72575889 None:intergenic 30.0%
! AATGTGTCTTTGGAAAATTG+GGG - chr8_2:72576075-72576094 Msa1267390:intron 30.0%
GCTAGATATCATAGAGTTAA+TGG + chr8_2:72576122-72576141 None:intergenic 30.0%
TTGAAACATTATTAGGACAC+AGG - chr8_2:72576149-72576168 Msa1267390:intron 30.0%
AAACAGACTGTTCAAAATGT+TGG - chr8_2:72576267-72576286 Msa1267390:intron 30.0%
ACATCTTCTTGTAACACTAA+AGG + chr8_2:72576526-72576545 None:intergenic 30.0%
GTTACAAGAAGATGTGAAAA+AGG - chr8_2:72576531-72576550 Msa1267390:intron 30.0%
AGAAGATGTGAAAAAGGTTT+CGG - chr8_2:72576537-72576556 Msa1267390:three_prime_UTR 30.0%
!! TTAGTTTAGTGAGAGTGTTA+TGG - chr8_2:72576658-72576677 Msa1267390:intron 30.0%
! AAGAGTCTAAAATCATGTTG+AGG - chr8_2:72576811-72576830 Msa1267390:intron 30.0%
! TTTTATCAAGACTCTGTCAT+TGG + chr8_2:72576875-72576894 None:intergenic 30.0%
!! ATAAAAGTGCTCGTGTTATT+TGG - chr8_2:72576889-72576908 Msa1267390:intron 30.0%
!!! TGTTTTAAGGTCCTTAAAGA+TGG - chr8_2:72577069-72577088 Msa1267390:intron 30.0%
CATTCAACAATCCATCTTTA+AGG + chr8_2:72577083-72577102 None:intergenic 30.0%
!! CTTAAAGATGGATTGTTGAA+TGG - chr8_2:72577081-72577100 Msa1267390:intron 30.0%
! CATCACCTTTTTCTTGAAAA+TGG + chr8_2:72577273-72577292 None:intergenic 30.0%
! ATGGTAATCAGAGTTTTTGA+AGG + chr8_2:72577315-72577334 None:intergenic 30.0%
!!! GTTTTCTGCCTTTTTTTAGA+GGG + chr8_2:72577380-72577399 None:intergenic 30.0%
!!! AGTTTTCTGCCTTTTTTTAG+AGG + chr8_2:72577381-72577400 None:intergenic 30.0%
CTAAATGACACCTAAGATTT+AGG - chr8_2:72577414-72577433 Msa1267390:intron 30.0%
TAGTTAATAGTTATGCCCTA+TGG - chr8_2:72577499-72577518 Msa1267390:intron 30.0%
AGTTAATAGTTATGCCCTAT+GGG - chr8_2:72577500-72577519 Msa1267390:intron 30.0%
! GCATTTAAAATTTAGTGCCT+AGG - chr8_2:72577577-72577596 Msa1267390:intron 30.0%
GATTCAATACATATCCGATA+TGG - chr8_2:72577713-72577732 Msa1267390:intron 30.0%
TCATTTGCATGTTTATTCTC+TGG + chr8_2:72577856-72577875 None:intergenic 30.0%
ATCGTATTCACTAGTATTGT+GGG + chr8_2:72578183-72578202 None:intergenic 30.0%
AATCGTATTCACTAGTATTG+TGG + chr8_2:72578184-72578203 None:intergenic 30.0%
ATCACCAATTTCTGTAAACT+TGG + chr8_2:72578261-72578280 None:intergenic 30.0%
!!! CATTATTTTCAAGTCCATCA+AGG + chr8_2:72578573-72578592 None:intergenic 30.0%
! TATACCAGTTAGTTTCAGAA+AGG + chr8_2:72579045-72579064 None:intergenic 30.0%
TAGTCAACTATATTCTCTCT+TGG - chr8_2:72579179-72579198 Msa1267390:three_prime_UTR 30.0%
!! TGAACTTAACTTGTGACATA+AGG - chr8_2:72579377-72579396 Msa1267390:three_prime_UTR 30.0%
ATAAGCTCGCAATTAAGTTA+TGG - chr8_2:72579559-72579578 Msa1267390:CDS 30.0%
TAAGCTCGCAATTAAGTTAT+GGG - chr8_2:72579560-72579579 Msa1267390:CDS 30.0%
!! CAAAATTTTCAGGCATCAAA+GGG + chr8_2:72579789-72579808 None:intergenic 30.0%
! CCTGAAAATTTTGCACTTTT+GGG - chr8_2:72579796-72579815 Msa1267390:CDS 30.0%
TCTGCTAGTAATAAATCATC+AGG + chr8_2:72580208-72580227 None:intergenic 30.0%
!!! ATTTCCCTTTTTTAAGGCAA+TGG + chr8_2:72580419-72580438 None:intergenic 30.0%
!!! GGAAACATTTCCCTTTTTTA+AGG + chr8_2:72580425-72580444 None:intergenic 30.0%
TAAATATCATCCCATTGCAT+GGG + chr8_2:72580483-72580502 None:intergenic 30.0%
TTAAATATCATCCCATTGCA+TGG + chr8_2:72580484-72580503 None:intergenic 30.0%
AAGTTTGGCAAACATGATAA+AGG - chr8_2:72580506-72580525 Msa1267390:CDS 30.0%
AGAGATTTGATTGTTGGGAA+GGG + chr8_2:72574861-72574880 None:intergenic 35.0%
AAGAGATTTGATTGTTGGGA+AGG + chr8_2:72574862-72574881 None:intergenic 35.0%
! AGTTAGTTAGTTTACTTGGG+CGG + chr8_2:72575095-72575114 None:intergenic 35.0%
! GAGGAGTTAGTTAGTTTACT+TGG + chr8_2:72575099-72575118 None:intergenic 35.0%
ATCGAATTGAATGGAAAAGG+AGG + chr8_2:72575118-72575137 None:intergenic 35.0%
!! GTTTGTTTGTTTGTTTCTGC+AGG - chr8_2:72575178-72575197 Msa1267390:intron 35.0%
AAGAGAGGAAGATATTGCTT+TGG + chr8_2:72575363-72575382 None:intergenic 35.0%
AAAGCAATATCTTCCTCTCT+TGG - chr8_2:72575362-72575381 Msa1267390:intron 35.0%
AAGCAATATCTTCCTCTCTT+GGG - chr8_2:72575363-72575382 Msa1267390:intron 35.0%
!! TTTCTTTGACTTGAAGCATG+CGG + chr8_2:72575504-72575523 None:intergenic 35.0%
AGTGTTATGGAAGAAAGAAG+AGG + chr8_2:72575580-72575599 None:intergenic 35.0%
AGACAGGATTCTGTTTACAA+TGG - chr8_2:72575713-72575732 Msa1267390:intron 35.0%
! AGAGGTATGAAAAGAAACTC+TGG + chr8_2:72575842-72575861 None:intergenic 35.0%
!!! ATCATTGTTTTGGAAGGAAG+AGG + chr8_2:72575860-72575879 None:intergenic 35.0%
TTAACCAAATGGCAAGATTC+GGG + chr8_2:72575903-72575922 None:intergenic 35.0%
GTTAACCAAATGGCAAGATT+CGG + chr8_2:72575904-72575923 None:intergenic 35.0%
!! TTTAGTGAGAGTGTTATGGA+AGG - chr8_2:72576662-72576681 Msa1267390:intron 35.0%
TTTAGACTCTTGAGTGACAA+AGG + chr8_2:72576802-72576821 None:intergenic 35.0%
! TGTCTGAAATCCAATGTCTT+TGG - chr8_2:72576843-72576862 Msa1267390:intron 35.0%
AAGGAGACTATGAGATTCTA+TGG + chr8_2:72577334-72577353 None:intergenic 35.0%
! TGCATTCTCCCTCTAAAAAA+AGG - chr8_2:72577369-72577388 Msa1267390:intron 35.0%
AGAAGATTCCGATATATGGT+CGG - chr8_2:72577463-72577482 Msa1267390:intron 35.0%
!! GGTTCTATTCTAAAGTGCAT+AGG - chr8_2:72577555-72577574 Msa1267390:intron 35.0%
! ACCAAAGCTAGACTTTTGAA+GGG + chr8_2:72577644-72577663 None:intergenic 35.0%
GTATTGTATCTGTGCATCAT+AGG + chr8_2:72577685-72577704 None:intergenic 35.0%
CACAGATACAATACGAGTAT+CGG - chr8_2:72577691-72577710 Msa1267390:intron 35.0%
AAGAAAAAGAAGACATCGGT+TGG - chr8_2:72577924-72577943 Msa1267390:intron 35.0%
!!! TTTTGGAATATTGAGTGGGT+TGG - chr8_2:72577956-72577975 Msa1267390:intron 35.0%
!!! CTCATGCTCTGTTTTTTCTT+CGG + chr8_2:72578052-72578071 None:intergenic 35.0%
AAAACAGAGCATGAGGTAAT+TGG - chr8_2:72578057-72578076 Msa1267390:intron 35.0%
ATATGATTCCTTAGTCTCTG+TGG + chr8_2:72578120-72578139 None:intergenic 35.0%
GAGACTAAGGAATCATATCA+AGG - chr8_2:72578122-72578141 Msa1267390:intron 35.0%
ACTAGTATTGTGGGATTTAC+TGG + chr8_2:72578174-72578193 None:intergenic 35.0%
! TGTTTGTGTGCTAATTTGCA+AGG + chr8_2:72578237-72578256 None:intergenic 35.0%
ACAGCCAAGTTTACAGAAAT+TGG - chr8_2:72578254-72578273 Msa1267390:three_prime_UTR 35.0%
! ATTTAGTCACTTTCCCTTGA+TGG - chr8_2:72578556-72578575 Msa1267390:intron 35.0%
TGTTCTGACCACAAATGATT+CGG + chr8_2:72578629-72578648 None:intergenic 35.0%
ACTGGATAGAAAAACGCTAT+GGG - chr8_2:72578648-72578667 Msa1267390:intron 35.0%
!! AAGGCTTTGAGCTTGTAAAT+AGG - chr8_2:72578797-72578816 Msa1267390:intron 35.0%
GATAGCTCTTGGTTCATATA+GGG + chr8_2:72578911-72578930 None:intergenic 35.0%
GATGTTGGTATAAGATCCTT+CGG + chr8_2:72579155-72579174 None:intergenic 35.0%
AGGATCTTATACCAACATCA+AGG - chr8_2:72579156-72579175 Msa1267390:three_prime_UTR 35.0%
ATAGTTGACTACCTTGATGT+TGG + chr8_2:72579170-72579189 None:intergenic 35.0%
CAACTATATTCTCTCTTGGT+AGG - chr8_2:72579183-72579202 Msa1267390:three_prime_UTR 35.0%
TATATTCTCTCTTGGTAGGA+TGG - chr8_2:72579187-72579206 Msa1267390:three_prime_UTR 35.0%
! ACTACTACTAGAGCATCATA+TGG + chr8_2:72579267-72579286 None:intergenic 35.0%
GTAGTAGTACAGCTACTATA+TGG - chr8_2:72579279-72579298 Msa1267390:three_prime_UTR 35.0%
AAATGCTAACAAGTGTCCTA+AGG - chr8_2:72579583-72579602 Msa1267390:CDS 35.0%
AATGCTAACAAGTGTCCTAA+GGG - chr8_2:72579584-72579603 Msa1267390:CDS 35.0%
ATTCCTTAACAAATGCCCTA+AGG - chr8_2:72579722-72579741 Msa1267390:intron 35.0%
TTCCTTAACAAATGCCCTAA+GGG - chr8_2:72579723-72579742 Msa1267390:intron 35.0%
!! GCAAAATTTTCAGGCATCAA+AGG + chr8_2:72579790-72579809 None:intergenic 35.0%
! GCCTGAAAATTTTGCACTTT+TGG - chr8_2:72579795-72579814 Msa1267390:CDS 35.0%
!! CCCAAAAGTGCAAAATTTTC+AGG + chr8_2:72579799-72579818 None:intergenic 35.0%
! AAATTTTGCACTTTTGGGCT+TGG - chr8_2:72579801-72579820 Msa1267390:CDS 35.0%
! AATTTTGCACTTTTGGGCTT+GGG - chr8_2:72579802-72579821 Msa1267390:CDS 35.0%
! AATTTCTTGCCATGTTTTGC+AGG - chr8_2:72580174-72580193 Msa1267390:intron 35.0%
TGACAATGATTTCCCTTCAA+TGG + chr8_2:72580287-72580306 None:intergenic 35.0%
! GAGATTTGTGTAAAAGCACA+TGG - chr8_2:72580393-72580412 Msa1267390:intron 35.0%
ATGGCCATTGCCTTAAAAAA+GGG - chr8_2:72580412-72580431 Msa1267390:intron 35.0%
AGTAGATTTCTTCTACCATG+CGG + chr8_2:72580446-72580465 None:intergenic 35.0%
AAATATCATCCCATTGCATG+GGG + chr8_2:72580482-72580501 None:intergenic 35.0%
TTCTTCTCTTCCTCTTCTTC+TGG - chr8_2:72574830-72574849 Msa1267390:three_prime_UTR 40.0%
TCTTCTCTTCCTCTTCTTCT+GGG - chr8_2:72574831-72574850 Msa1267390:three_prime_UTR 40.0%
ACAACTACAACTACAGCTAC+AGG - chr8_2:72574882-72574901 Msa1267390:three_prime_UTR 40.0%
TCACTGTTACTGTAGTAGTC+AGG - chr8_2:72574972-72574991 Msa1267390:three_prime_UTR 40.0%
AGCAGCAGCATAACATATTG+AGG + chr8_2:72575053-72575072 None:intergenic 40.0%
!! TTGTTTGTTTCTGCAGGAAC+AGG - chr8_2:72575184-72575203 Msa1267390:intron 40.0%
AGGAAGATATTGCTTTGGCA+TGG + chr8_2:72575358-72575377 None:intergenic 40.0%
ACGTACCTATAGAGTGCAAT+GGG + chr8_2:72575393-72575412 None:intergenic 40.0%
TACGTACCTATAGAGTGCAA+TGG + chr8_2:72575394-72575413 None:intergenic 40.0%
!! TTCTTTGACTTGAAGCATGC+GGG + chr8_2:72575503-72575522 None:intergenic 40.0%
TGAAAGATGTCGTTGTAGGA+AGG + chr8_2:72575544-72575563 None:intergenic 40.0%
TCCTACAACGACATCTTTCA+AGG - chr8_2:72575544-72575563 Msa1267390:intron 40.0%
ACCTTGAAAGATGTCGTTGT+AGG + chr8_2:72575548-72575567 None:intergenic 40.0%
AATTTCCTTTGGCATCTGAG+GGG + chr8_2:72575655-72575674 None:intergenic 40.0%
CAATTTCCTTTGGCATCTGA+GGG + chr8_2:72575656-72575675 None:intergenic 40.0%
! GAATCCTGTCTTTCTTTTCC+AGG + chr8_2:72575704-72575723 None:intergenic 40.0%
TTCTGTTTACAATGGCCTTC+AGG - chr8_2:72575721-72575740 Msa1267390:intron 40.0%
AGAAAACAGCACATTCCTGA+AGG + chr8_2:72575739-72575758 None:intergenic 40.0%
GTTTATCCCGTTAACACTCA+TGG - chr8_2:72576418-72576437 Msa1267390:intron 40.0%
TAAGGAGCCATGAGTGTTAA+CGG + chr8_2:72576428-72576447 None:intergenic 40.0%
ACATATCACTGCTTGTAGGT+GGG + chr8_2:72576691-72576710 None:intergenic 40.0%
CTACAAGCAGTGATATGTCA+GGG - chr8_2:72576693-72576712 Msa1267390:three_prime_UTR 40.0%
ACTGAATACCTCCTTGATTG+TGG + chr8_2:72577136-72577155 None:intergenic 40.0%
TCTTCGGCTACCTAAATCTT+AGG + chr8_2:72577427-72577446 None:intergenic 40.0%
GAGGAGAAGATTCCGATATA+TGG - chr8_2:72577459-72577478 Msa1267390:intron 40.0%
!! CCAAAGCTAGACTTTTGAAG+GGG + chr8_2:72577643-72577662 None:intergenic 40.0%
! GACCAAAGCTAGACTTTTGA+AGG + chr8_2:72577645-72577664 None:intergenic 40.0%
!! GAAATGAGGTATCGCCATAT+CGG + chr8_2:72577730-72577749 None:intergenic 40.0%
!!! TCGGTTGGACCGTTTTATTT+TGG - chr8_2:72577939-72577958 Msa1267390:intron 40.0%
CGAAGAAAAAACAGAGCATG+AGG - chr8_2:72578050-72578069 Msa1267390:intron 40.0%
AGCAGTTACGTAACTGTGAA+TGG + chr8_2:72578386-72578405 None:intergenic 40.0%
ACGTAACTGCTTTACAACTG+TGG - chr8_2:72578395-72578414 Msa1267390:intron 40.0%
!! CTGCAGAAAGATTAGCTTAC+AGG + chr8_2:72578599-72578618 None:intergenic 40.0%
CTGTAAGCTAATCTTTCTGC+AGG - chr8_2:72578597-72578616 Msa1267390:intron 40.0%
ATCATTTGTGGTCAGAACAC+TGG - chr8_2:72578630-72578649 Msa1267390:intron 40.0%
CACTGGATAGAAAAACGCTA+TGG - chr8_2:72578647-72578666 Msa1267390:intron 40.0%
GGATAGCTCTTGGTTCATAT+AGG + chr8_2:72578912-72578931 None:intergenic 40.0%
CAATATGTCTGGATAGCTCT+TGG + chr8_2:72578922-72578941 None:intergenic 40.0%
TTACCATGAATGACTCACCT+GGG + chr8_2:72578949-72578968 None:intergenic 40.0%
TTTACCATGAATGACTCACC+TGG + chr8_2:72578950-72578969 None:intergenic 40.0%
CGGAACAATGTTGAGAAGAT+AGG - chr8_2:72579016-72579035 Msa1267390:three_prime_UTR 40.0%
!! GTTGCCTTTCTGAAACTAAC+TGG - chr8_2:72579038-72579057 Msa1267390:three_prime_UTR 40.0%
TACAACCTTCTTTGCAGAGA+AGG - chr8_2:72579070-72579089 Msa1267390:three_prime_UTR 40.0%
TACTGACGATGTTTCCATTG+TGG - chr8_2:72579102-72579121 Msa1267390:three_prime_UTR 40.0%
! ATGTTTAAGGTGCTCCACAA+TGG + chr8_2:72579119-72579138 None:intergenic 40.0%
CATCCTGTTTATATCACCGA+AGG - chr8_2:72579136-72579155 Msa1267390:three_prime_UTR 40.0%
GATCCTTCGGTGATATAAAC+AGG + chr8_2:72579142-72579161 None:intergenic 40.0%
TTGGGCTTATGAGAATTGAG+AGG - chr8_2:72579344-72579363 Msa1267390:three_prime_UTR 40.0%
TGGGCTTATGAGAATTGAGA+GGG - chr8_2:72579345-72579364 Msa1267390:three_prime_UTR 40.0%
TATGCTAACAAGTGCCCTTA+GGG + chr8_2:72579740-72579759 None:intergenic 40.0%
TTATGCTAACAAGTGCCCTT+AGG + chr8_2:72579741-72579760 None:intergenic 40.0%
TTTGCCAATCTCACCATTGA+AGG - chr8_2:72580271-72580290 Msa1267390:CDS 40.0%
TTGCCAATCTCACCATTGAA+GGG - chr8_2:72580272-72580291 Msa1267390:CDS 40.0%
TTTCCCTTCAATGGTGAGAT+TGG + chr8_2:72580278-72580297 None:intergenic 40.0%
CATGGCCATTGCCTTAAAAA+AGG - chr8_2:72580411-72580430 Msa1267390:intron 40.0%
AAAAGGGAAATGTTTCCGCA+TGG - chr8_2:72580428-72580447 Msa1267390:intron 40.0%
GTTACTGTAGTAGTCAGGTC+AGG - chr8_2:72574977-72574996 Msa1267390:three_prime_UTR 45.0%
! AGTTAGTTTACTTGGGCGGT+GGG + chr8_2:72575091-72575110 None:intergenic 45.0%
! TAGTTAGTTTACTTGGGCGG+TGG + chr8_2:72575092-72575111 None:intergenic 45.0%
ACCTATAGAGTGCAATGGGT+TGG + chr8_2:72575389-72575408 None:intergenic 45.0%
GCAATTTCCTTTGGCATCTG+AGG + chr8_2:72575657-72575676 None:intergenic 45.0%
GTCTGGTTGGCAATTTCCTT+TGG + chr8_2:72575666-72575685 None:intergenic 45.0%
! GTGCAAATTTGAGGTCTGGT+TGG + chr8_2:72575679-72575698 None:intergenic 45.0%
TTCCAGGCAGTGCAAATTTG+AGG + chr8_2:72575688-72575707 None:intergenic 45.0%
ACTGCCTGGAAAAGAAAGAC+AGG - chr8_2:72575697-72575716 Msa1267390:intron 45.0%
CAAACCCGAATCTTGCCATT+TGG - chr8_2:72575896-72575915 Msa1267390:intron 45.0%
GTATGGGCACGTTAACCAAA+TGG + chr8_2:72575914-72575933 None:intergenic 45.0%
! CTTTGGAAAATTGGGGAGCA+CGG - chr8_2:72576082-72576101 Msa1267390:intron 45.0%
AAGGAGCCATGAGTGTTAAC+GGG + chr8_2:72576427-72576446 None:intergenic 45.0%
GACATATCACTGCTTGTAGG+TGG + chr8_2:72576692-72576711 None:intergenic 45.0%
CCTGACATATCACTGCTTGT+AGG + chr8_2:72576695-72576714 None:intergenic 45.0%
CCTACAAGCAGTGATATGTC+AGG - chr8_2:72576692-72576711 Msa1267390:three_prime_UTR 45.0%
TTGGCAATCGCCAAAGACAT+TGG + chr8_2:72576856-72576875 None:intergenic 45.0%
TTGAATGGAGCTGCTGTTCT+TGG - chr8_2:72577096-72577115 Msa1267390:intron 45.0%
TAGGCAGTCCGACCATATAT+CGG + chr8_2:72577474-72577493 None:intergenic 45.0%
! CCTTTCTTTTGCCACCTCAA+TGG + chr8_2:72577533-72577552 None:intergenic 45.0%
CCATTGAGGTGGCAAAAGAA+AGG - chr8_2:72577530-72577549 Msa1267390:intron 45.0%
TGAGGTGGCAAAAGAAAGGT+TGG - chr8_2:72577534-72577553 Msa1267390:intron 45.0%
!! CTAGACTTTTGAAGGGGTGT+TGG + chr8_2:72577637-72577656 None:intergenic 45.0%
! CCCCTTCAAAAGTCTAGCTT+TGG - chr8_2:72577640-72577659 Msa1267390:intron 45.0%
CTGCAAAGAACTGTGATGCA+CGG + chr8_2:72578088-72578107 None:intergenic 45.0%
! TTTTCCTGCCACAGAGACTA+AGG - chr8_2:72578109-72578128 Msa1267390:intron 45.0%
GGCAAACACCGAATCATTTG+TGG - chr8_2:72578618-72578637 Msa1267390:intron 45.0%
CATCTTTGCAGTTTGACCTG+TGG + chr8_2:72578685-72578704 None:intergenic 45.0%
TTATCAAACCCGAGTTGCTG+AGG - chr8_2:72578773-72578792 Msa1267390:intron 45.0%
AAAGCCTTTCCTCAGCAACT+CGG + chr8_2:72578785-72578804 None:intergenic 45.0%
CAAGACCTTCTCTGCAAAGA+AGG + chr8_2:72579078-72579097 None:intergenic 45.0%
TCTCTCTTGGTAGGATGGTT+AGG - chr8_2:72579192-72579211 Msa1267390:three_prime_UTR 45.0%
TTTCTCTGACGTGCTTAGTC+GGG + chr8_2:72579320-72579339 None:intergenic 45.0%
CTTTCTCTGACGTGCTTAGT+CGG + chr8_2:72579321-72579340 None:intergenic 45.0%
!! AGCACGTCAGAGAAAGCATT+TGG - chr8_2:72579325-72579344 Msa1267390:three_prime_UTR 45.0%
!! GCACGTCAGAGAAAGCATTT+GGG - chr8_2:72579326-72579345 Msa1267390:three_prime_UTR 45.0%
!! ATGAGAATTGAGAGGGCGTT+TGG - chr8_2:72579352-72579371 Msa1267390:three_prime_UTR 45.0%
GCTTCTTATCAAGTGCCCTT+AGG + chr8_2:72579602-72579621 None:intergenic 45.0%
! TGCCCTTAGGGCATTTGTTA+AGG + chr8_2:72579728-72579747 None:intergenic 45.0%
GCTTGGGCGTAACTTATCTT+GGG - chr8_2:72579818-72579837 Msa1267390:CDS 45.0%
GACTTGGATAACAGCGATCT+TGG - chr8_2:72580045-72580064 Msa1267390:intron 45.0%
AAGGGCAATCCCAGAAGAAG+AGG + chr8_2:72574843-72574862 None:intergenic 50.0%
GTTTCTGCAGGAACAGGAGA+AGG - chr8_2:72575190-72575209 Msa1267390:intron 50.0%
GCCAACCCATTGCACTCTAT+AGG - chr8_2:72575385-72575404 Msa1267390:intron 50.0%
! GGCAGTGCAAATTTGAGGTC+TGG + chr8_2:72575683-72575702 None:intergenic 50.0%
GACCTCAAATTTGCACTGCC+TGG - chr8_2:72575683-72575702 Msa1267390:intron 50.0%
!! TGTTCTTGGTGTCCCTGTGA+AGG - chr8_2:72577110-72577129 Msa1267390:intron 50.0%
CCTTGATTGTGGCCTTCACA+GGG + chr8_2:72577125-72577144 None:intergenic 50.0%
TCCTTGATTGTGGCCTTCAC+AGG + chr8_2:72577126-72577145 None:intergenic 50.0%
TGTGAAGGCCACAATCAAGG+AGG - chr8_2:72577125-72577144 Msa1267390:intron 50.0%
TCGGAATCTTCTCCTCTGCA+TGG + chr8_2:72577455-72577474 None:intergenic 50.0%
TCAATGGCTAGGCACCCATA+GGG + chr8_2:72577517-72577536 None:intergenic 50.0%
! CTTTTGCCACCTCAATGGCT+AGG + chr8_2:72577528-72577547 None:intergenic 50.0%
!! TAGTGCCTAGGCACTGAAGT+CGG - chr8_2:72577589-72577608 Msa1267390:intron 50.0%
GATTCCTTAGTCTCTGTGGC+AGG + chr8_2:72578116-72578135 None:intergenic 50.0%
AAACCCGAGTTGCTGAGGAA+AGG - chr8_2:72578778-72578797 Msa1267390:intron 50.0%
AAGCCTTTCCTCAGCAACTC+GGG + chr8_2:72578784-72578803 None:intergenic 50.0%
TCCAGACATATTGACCACCC+AGG - chr8_2:72578929-72578948 Msa1267390:three_prime_UTR 50.0%
ACCTGGGTGGTCAATATGTC+TGG + chr8_2:72578933-72578952 None:intergenic 50.0%
GGCTTGGGCGTAACTTATCT+TGG - chr8_2:72579817-72579836 Msa1267390:CDS 50.0%
GGGCGTAACTTATCTTGGGT+TGG - chr8_2:72579822-72579841 Msa1267390:CDS 50.0%
GCGTAGTCACCTGCAAAACA+TGG + chr8_2:72580186-72580205 None:intergenic 50.0%
ATTACCAGTGCCCCATGCAA+TGG - chr8_2:72580469-72580488 Msa1267390:CDS 50.0%
TTACCAGTGCCCCATGCAAT+GGG - chr8_2:72580470-72580489 Msa1267390:CDS 50.0%
TTTACTTGGGCGGTGGGAAG+TGG + chr8_2:72575085-72575104 None:intergenic 55.0%
TGGAGGGAAGGGCAAGAGAA+TGG - chr8_2:72575256-72575275 Msa1267390:intron 55.0%
GGAGGGAAGGGCAAGAGAAT+GGG - chr8_2:72575257-72575276 Msa1267390:intron 55.0%
TCCTTTGGCATCTGAGGGGA+GGG + chr8_2:72575651-72575670 None:intergenic 55.0%
TTCCTTTGGCATCTGAGGGG+AGG + chr8_2:72575652-72575671 None:intergenic 55.0%
CCCTGTGAAGGCCACAATCA+AGG - chr8_2:72577122-72577141 Msa1267390:intron 55.0%
TGCACAGCACACTCAACGCA+AGG + chr8_2:72577353-72577372 None:intergenic 55.0%
CCTCTGCATGGTGTGCTCTT+CGG + chr8_2:72577443-72577462 None:intergenic 55.0%
CTCAATGGCTAGGCACCCAT+AGG + chr8_2:72577518-72577537 None:intergenic 55.0%
CTATGGGTGCCTAGCCATTG+AGG - chr8_2:72577516-72577535 Msa1267390:intron 55.0%
ATGGGAGATGCAGACTCCAC+AGG - chr8_2:72578666-72578685 Msa1267390:intron 55.0%
CCATGAATGACTCACCTGGG+TGG + chr8_2:72578946-72578965 None:intergenic 55.0%
CCACCCAGGTGAGTCATTCA+TGG - chr8_2:72578943-72578962 Msa1267390:three_prime_UTR 55.0%
CGTGCTTAGTCGGGTCAAGT+GGG + chr8_2:72579311-72579330 None:intergenic 55.0%
ACGTGCTTAGTCGGGTCAAG+TGG + chr8_2:72579312-72579331 None:intergenic 55.0%
GTCTCCGTTGTACTGCTCGC+TGG - chr8_2:72575236-72575255 Msa1267390:intron 60.0%
TCCGTTGTACTGCTCGCTGG+AGG - chr8_2:72575239-72575258 Msa1267390:intron 60.0%
CCCTCCAGCGAGCAGTACAA+CGG + chr8_2:72575243-72575262 None:intergenic 60.0%
CCGTTGTACTGCTCGCTGGA+GGG - chr8_2:72575240-72575259 Msa1267390:intron 60.0%
TGTACTGCTCGCTGGAGGGA+AGG - chr8_2:72575244-72575263 Msa1267390:intron 60.0%
GTACTGCTCGCTGGAGGGAA+GGG - chr8_2:72575245-72575264 Msa1267390:intron 60.0%
!! GCAATGGGTTGGCCCAAGAG+AGG + chr8_2:72575378-72575397 None:intergenic 60.0%
CTTTGGCATCTGAGGGGAGG+GGG + chr8_2:72575649-72575668 None:intergenic 60.0%
CCTTTGGCATCTGAGGGGAG+GGG + chr8_2:72575650-72575669 None:intergenic 60.0%
! CCGAAGAGCACACCATGCAG+AGG - chr8_2:72577440-72577459 Msa1267390:intron 60.0%
TGGGTGCCTAGCCATTGAGG+TGG - chr8_2:72577519-72577538 Msa1267390:intron 60.0%
!! CCTCACCGACTTCAGTGCCT+AGG + chr8_2:72577597-72577616 None:intergenic 60.0%
!! CCTAGGCACTGAAGTCGGTG+AGG - chr8_2:72577594-72577613 Msa1267390:intron 60.0%
CATCCCATTGCATGGGGCAC+TGG + chr8_2:72580476-72580495 None:intergenic 60.0%
CCCCTCCCCTCAGATGCCAA+AGG - chr8_2:72575647-72575666 Msa1267390:intron 65.0%
! GGCACTGAAGTCGGTGAGGC+AGG - chr8_2:72577598-72577617 Msa1267390:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 72574786 72580566 72574786 ID=Msa1267390;Name=Msa1267390
chr8_2 mRNA 72574786 72580566 72574786 ID=Msa1267390-mRNA-1;Parent=Msa1267390;Name=Msa1267390-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.9|0.81|1|1|0.90|11|1397|195
chr8_2 exon 72574786 72575156 72574786 ID=Msa1267390-mRNA-1:exon:24598;Parent=Msa1267390-mRNA-1
chr8_2 exon 72576175 72576265 72576175 ID=Msa1267390-mRNA-1:exon:24597;Parent=Msa1267390-mRNA-1
chr8_2 exon 72576534 72576580 72576534 ID=Msa1267390-mRNA-1:exon:24596;Parent=Msa1267390-mRNA-1
chr8_2 exon 72576665 72576733 72576665 ID=Msa1267390-mRNA-1:exon:24595;Parent=Msa1267390-mRNA-1
chr8_2 exon 72578206 72578274 72578206 ID=Msa1267390-mRNA-1:exon:24594;Parent=Msa1267390-mRNA-1
chr8_2 exon 72578800 72579692 72578800 ID=Msa1267390-mRNA-1:exon:24593;Parent=Msa1267390-mRNA-1
chr8_2 exon 72579787 72579866 72579787 ID=Msa1267390-mRNA-1:exon:24592;Parent=Msa1267390-mRNA-1
chr8_2 exon 72579946 72580001 72579946 ID=Msa1267390-mRNA-1:exon:24591;Parent=Msa1267390-mRNA-1
chr8_2 exon 72580072 72580152 72580072 ID=Msa1267390-mRNA-1:exon:24590;Parent=Msa1267390-mRNA-1
chr8_2 exon 72580253 72580358 72580253 ID=Msa1267390-mRNA-1:exon:24589;Parent=Msa1267390-mRNA-1
chr8_2 exon 72580445 72580566 72580445 ID=Msa1267390-mRNA-1:exon:24588;Parent=Msa1267390-mRNA-1
chr8_2 CDS 72580445 72580566 72580445 ID=Msa1267390-mRNA-1:cds;Parent=Msa1267390-mRNA-1
chr8_2 CDS 72580253 72580358 72580253 ID=Msa1267390-mRNA-1:cds;Parent=Msa1267390-mRNA-1
chr8_2 CDS 72580072 72580152 72580072 ID=Msa1267390-mRNA-1:cds;Parent=Msa1267390-mRNA-1
chr8_2 CDS 72579946 72580001 72579946 ID=Msa1267390-mRNA-1:cds;Parent=Msa1267390-mRNA-1
chr8_2 CDS 72579787 72579866 72579787 ID=Msa1267390-mRNA-1:cds;Parent=Msa1267390-mRNA-1
chr8_2 CDS 72579550 72579692 72579550 ID=Msa1267390-mRNA-1:cds;Parent=Msa1267390-mRNA-1
chr8_2 three_prime_UTR 72578800 72579549 72578800 ID=Msa1267390-mRNA-1:three_prime_utr;Parent=Msa1267390-mRNA-1
chr8_2 three_prime_UTR 72578206 72578274 72578206 ID=Msa1267390-mRNA-1:three_prime_utr;Parent=Msa1267390-mRNA-1
chr8_2 three_prime_UTR 72576665 72576733 72576665 ID=Msa1267390-mRNA-1:three_prime_utr;Parent=Msa1267390-mRNA-1
chr8_2 three_prime_UTR 72576534 72576580 72576534 ID=Msa1267390-mRNA-1:three_prime_utr;Parent=Msa1267390-mRNA-1
chr8_2 three_prime_UTR 72576175 72576265 72576175 ID=Msa1267390-mRNA-1:three_prime_utr;Parent=Msa1267390-mRNA-1
chr8_2 three_prime_UTR 72574786 72575156 72574786 ID=Msa1267390-mRNA-1:three_prime_utr;Parent=Msa1267390-mRNA-1
Gene Sequence

>Msa1267390

ATGGAATTTGTGATTAAGTTTCAGCATTGTTCTTCTTCTTCTTCTTCTTCTCTTCCTCTTCTTCTGGGATTGCCCTTCCCAACAATCAAATCTCTTACAACTACAACTACAGCTACAGGCAAGTCAGGTCCTCAAATATCTATAAACAACAACAACAAAAATGTTTTATTATCATCAACCTCAATATGTTATGCTGCTGCTGCTGCTGCTCCACTTCCCACCGCCCAAGAACAGGAGAAGGATGTTGTCGTTAAAGACAGAAGCGTCTCCGTTGTACTGCTCGCTGGAGGGAAGGGCAAGAGAATGGGAGCTACCATGCCAAAGCAATATCTTCCTCTCTTGGGCCAACCCATTGCACTCTATAGTTTCTACACTTTCTCCCGCATGCTTCAAGTCAAAGAAATCATTGTCGTTTGCGATCCTTCCTACAACGACATCTTTCAAGATGCCAAAGGAAATTGCCAACCAGACCTCAAATTTGCACTGCCTGGAAAAGAAAGACAGGATTCTGTTTACAATGGCCTTCAGGAATGTGCTGTTTTCTTTGCTTGTTTAATAATCTGTATCATGAAATATTTTTATGCGTGA

Protein sequence

>Msa1267390

MEFVIKFQHCSSSSSSSLPLLLGLPFPTIKSLTTTTTATGKSGPQISINNNNKNVLLSSTSICYAAAAAAPLPTAQEQEKDVVVKDRSVSVVLLAGGKGKRMGATMPKQYLPLLGQPIALYSFYTFSRMLQVKEIIVVCDPSYNDIFQDAKGNCQPDLKFALPGKERQDSVYNGLQECAVFFACLIICIMKYFYA*